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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.269 C 0.231 G 0.231 T 0.269 

MOTIF 1-ATTACACA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 2.4e-001
 0.770786 0.002452 0.223906 0.002856
 0.002856 0.076033 0.002452 0.918659
 0.002856 0.002452 0.002452 0.992240
 0.992240 0.002452 0.002452 0.002856
 0.002856 0.991837 0.002452 0.002856
 0.992240 0.002452 0.002452 0.002856
 0.076436 0.771094 0.076033 0.076436
 0.814382 0.149850 0.002452 0.033316

MOTIF 2-CACCTGTY STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.001744 0.995014 0.001498 0.001744
 0.976657 0.001498 0.020101 0.001744
 0.155602 0.651803 0.190852 0.001744
 0.001744 0.995014 0.001498 0.001744
 0.046684 0.046438 0.001498 0.905381
 0.001744 0.001498 0.995014 0.001744
 0.136998 0.001498 0.046438 0.815067
 0.001744 0.534933 0.001498 0.461825

MOTIF 3-CTCCTCCC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.002762 0.920947 0.002371 0.073920
 0.002762 0.002371 0.002371 0.992496
 0.002762 0.920947 0.073530 0.002762
 0.002762 0.992105 0.002371 0.002762
 0.016372 0.002371 0.122057 0.859200
 0.002762 0.849788 0.073530 0.073920
 0.002762 0.992105 0.002371 0.002762
 0.145308 0.778400 0.073530 0.002762

MOTIF 4-GCGTCATC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.003823 0.101798 0.792040 0.102339
 0.003823 0.989070 0.003283 0.003823
 0.102339 0.003283 0.693207 0.201171
 0.003823 0.003283 0.003283 0.989610
 0.003823 0.989070 0.003283 0.003823
 0.792580 0.101798 0.101798 0.003823
 0.003823 0.101798 0.003283 0.891095
 0.003823 0.989070 0.003283 0.003823

MOTIF 5-AGAAGAAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 1.0e+000
 0.991776 0.002599 0.002599 0.003026
 0.003026 0.002599 0.756642 0.237733
 0.991776 0.002599 0.002599 0.003026
 0.835557 0.158818 0.002599 0.003026
 0.003026 0.002599 0.823388 0.170987
 0.835808 0.080583 0.002599 0.081010
 0.991776 0.002599 0.002599 0.003026
 0.003026 0.002599 0.991348 0.003026

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/worm/fasta/RankLinear6.0_20/unc-120.fasta --oc ../result/final_prediction/worm/inference_raw/STREME/RankLinear6.0_20_unc-120/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n11.farnam.hpc.yale.internal
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FINALTIME:	1.04 seconds
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