********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.323 C 0.177 G 0.177 T 0.323 

MOTIF 1-GTAAACAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 113 P= 9.8e-002
 0.140297 0.000356 0.858696 0.000652
 0.000652 0.070350 0.042280 0.886718
 0.684080 0.286933 0.028335 0.000652
 0.977144 0.021849 0.000356 0.000652
 0.864388 0.000356 0.084250 0.051007
 0.000652 0.814763 0.000356 0.184229
 0.885137 0.042303 0.014323 0.058238
 0.588176 0.159214 0.123403 0.129207

MOTIF 2-CTKATMAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 5.0e-001
 0.089045 0.619324 0.050767 0.240864
 0.101629 0.000637 0.000637 0.897096
 0.001167 0.000637 0.498833 0.499363
 0.997559 0.000637 0.000637 0.001167
 0.001167 0.000637 0.000637 0.997559
 0.499363 0.498833 0.000637 0.001167
 0.897096 0.000637 0.000637 0.101629
 0.240864 0.050767 0.619324 0.089045

MOTIF 3-AAATATGA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 9.1e-001
 0.952155 0.022717 0.001317 0.023812
 0.994954 0.001317 0.001317 0.002412
 0.943260 0.001317 0.001317 0.054106
 0.113750 0.001317 0.022717 0.862216
 0.880154 0.001317 0.029170 0.089359
 0.054106 0.001317 0.053011 0.891566
 0.089359 0.001317 0.740793 0.168531
 0.787845 0.001317 0.104872 0.105967

MOTIF 4-YATTTTCC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.144462 0.566153 0.001796 0.287589
 0.922647 0.001796 0.072269 0.003288
 0.073762 0.001796 0.072269 0.852173
 0.003288 0.001796 0.001796 0.993121
 0.003288 0.001796 0.001796 0.993121
 0.003288 0.001796 0.001796 0.993121
 0.144462 0.850454 0.001796 0.003288
 0.003288 0.921041 0.001796 0.073875

MOTIF 5-AAACAAGT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 1.0e+000
 0.871009 0.063061 0.001567 0.064363
 0.809515 0.063061 0.001567 0.125857
 0.993997 0.001567 0.001567 0.002869
 0.002869 0.992695 0.001567 0.002869
 0.748021 0.247543 0.001567 0.002869
 0.890568 0.001567 0.001567 0.106299
 0.002869 0.001567 0.782027 0.213537
 0.002869 0.124555 0.001567 0.871009

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/worm/fasta/RankLinear6.0_20/daf-16.fasta --oc ../result/final_prediction/worm/inference_raw/STREME/RankLinear6.0_20_daf-16/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c23n01.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	1.14 seconds
********************************************************************************