******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/zip-8.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:11102471-11102551 1.0000 80 chrI:11254488-11254568 1.0000 80 chrIV:12689451-12689531 1.0000 80 chrIV:4167455-4167535 1.0000 80 chrIV:4673491-4673571 1.0000 80 chrII:12966433-12966513 1.0000 80 chrIII:8560557-8560637 1.0000 80 chrII:3782468-3782548 1.0000 80 chrIII:3018981-3019061 1.0000 80 chrI:7198981-7199061 1.0000 80 chrII:11536083-11536163 1.0000 80 chrIV:16777074-16777154 1.0000 80 chrIV:10777756-10777836 1.0000 80 chrIII:358265-358345 1.0000 80 chrV:3896199-3896279 1.0000 80 chrX:13227937-13228017 1.0000 80 chrI:8859461-8859541 1.0000 80 chrIV:7012373-7012453 1.0000 80 chrIII:8051997-8052077 1.0000 80 chrIV:3502521-3502601 1.0000 80 chrI:735266-735346 1.0000 80 chrX:5366772-5366852 1.0000 80 chrI:10932988-10933068 1.0000 80 chrV:19174785-19174865 1.0000 80 chrI:12833373-12833453 1.0000 80 chrI:419641-419721 1.0000 80 chrIII:6478795-6478875 1.0000 80 chrIII:5487246-5487326 1.0000 80 chrV:20182470-20182550 1.0000 80 chrIII:11350266-11350346 1.0000 80 chrIV:203080-203160 1.0000 80 chrI:1007989-1008069 1.0000 80 chrI:12791290-12791370 1.0000 80 chrIV:5056348-5056428 1.0000 80 chrI:11277590-11277670 1.0000 80 chrIII:4481946-4482026 1.0000 80 chrX:3139675-3139755 1.0000 80 chrV:18993176-18993256 1.0000 80 chrX:15988736-15988816 1.0000 80 chrIV:2461555-2461635 1.0000 80 chrIV:2170491-2170571 1.0000 80 chrIII:6478415-6478495 1.0000 80 chrI:8314847-8314927 1.0000 80 chrII:10103371-10103451 1.0000 80 chrV:18094100-18094180 1.0000 80 chrIV:2935353-2935433 1.0000 80 chrV:18536174-18536254 1.0000 80 chrIII:1579158-1579238 1.0000 80 chrIII:7743342-7743422 1.0000 80 chrIII:13329070-13329150 1.0000 80 chrV:14943057-14943137 1.0000 80 chrIII:3413596-3413676 1.0000 80 chrII:5518214-5518294 1.0000 80 chrIV:6793726-6793806 1.0000 80 chrII:349908-349988 1.0000 80 chrIV:3733446-3733526 1.0000 80 chrI:13390917-13390997 1.0000 80 chrV:18163593-18163673 1.0000 80 chrIV:7898069-7898149 1.0000 80 chrX:2777114-2777194 1.0000 80 chrI:10920537-10920617 1.0000 80 chrV:4330979-4331059 1.0000 80 chrIV:2137637-2137717 1.0000 80 chrI:13671909-13671989 1.0000 80 chrV:19853769-19853849 1.0000 80 chrI:1285083-1285163 1.0000 80 chrV:20235390-20235470 1.0000 80 chrX:14366240-14366320 1.0000 80 chrX:7204334-7204414 1.0000 80 chrX:16068143-16068223 1.0000 80 chrII:9125717-9125797 1.0000 80 chrIII:8303599-8303679 1.0000 80 chrI:1333661-1333741 1.0000 80 chrIII:4390606-4390686 1.0000 80 chrIV:3260375-3260455 1.0000 80 chrI:13592269-13592349 1.0000 80 chrIII:5967799-5967879 1.0000 80 chrX:12659973-12660053 1.0000 80 chrIV:3710896-3710976 1.0000 80 chrX:1242922-1243002 1.0000 80 chrI:576936-577016 1.0000 80 chrV:10769051-10769131 1.0000 80 chrIII:9497571-9497651 1.0000 80 chrII:6110148-6110228 1.0000 80 chrIV:3661276-3661356 1.0000 80 chrIV:12428626-12428706 1.0000 80 chrX:89064-89144 1.0000 80 chrV:17979948-17980028 1.0000 80 chrII:10594471-10594551 1.0000 80 chrV:1555246-1555326 1.0000 80 chrI:14674-14754 1.0000 80 chrI:15037585-15037665 1.0000 80 chrIII:2800902-2800982 1.0000 80 chrX:15849026-15849106 1.0000 80 chrIII:10361615-10361695 1.0000 80 chrI:644397-644477 1.0000 80 chrI:131988-132068 1.0000 80 chrX:15831696-15831776 1.0000 80 chrI:1256874-1256954 1.0000 80 chrI:6734489-6734569 1.0000 80 chrIV:2455287-2455367 1.0000 80 chrII:3681843-3681923 1.0000 80 chrIII:5481048-5481128 1.0000 80 chrV:11374077-11374157 1.0000 80 chrIII:3541252-3541332 1.0000 80 chrIV:8654233-8654313 1.0000 80 chrIII:8369331-8369411 1.0000 80 chrX:12996320-12996400 1.0000 80 chrI:12848405-12848485 1.0000 80 chrV:6705526-6705606 1.0000 80 chrIV:6803453-6803533 1.0000 80 chrI:3507583-3507663 1.0000 80 chrIV:16133935-16134015 1.0000 80 chrV:1053544-1053624 1.0000 80 chrI:3691965-3692045 1.0000 80 chrV:13598529-13598609 1.0000 80 chrIII:10994244-10994324 1.0000 80 chrI:8420739-8420819 1.0000 80 chrV:7408679-7408759 1.0000 80 chrIII:8851216-8851296 1.0000 80 chrIV:15063948-15064028 1.0000 80 chrIII:5750662-5750742 1.0000 80 chrX:15814707-15814787 1.0000 80 chrV:222167-222247 1.0000 80 chrX:16618886-16618966 1.0000 80 chrI:1287938-1288018 1.0000 80 chrIII:6975111-6975191 1.0000 80 chrIII:3738490-3738570 1.0000 80 chrIV:13441874-13441954 1.0000 80 chrIII:3094853-3094933 1.0000 80 chrIII:6837479-6837559 1.0000 80 chrIII:3351250-3351330 1.0000 80 chrIII:5344720-5344800 1.0000 80 chrIII:6331370-6331450 1.0000 80 chrI:464786-464866 1.0000 80 chrIII:5627691-5627771 1.0000 80 chrX:9719574-9719654 1.0000 80 chrV:4132425-4132505 1.0000 80 chrII:12446417-12446497 1.0000 80 chrV:10366398-10366478 1.0000 80 chrIV:7922455-7922535 1.0000 80 chrX:14011422-14011502 1.0000 80 chrIV:669699-669779 1.0000 80 chrIII:9598942-9599022 1.0000 80 chrIV:2257538-2257618 1.0000 80 chrI:5948493-5948573 1.0000 80 chrV:10402618-10402698 1.0000 80 chrX:3282160-3282240 1.0000 80 chrIII:12777809-12777889 1.0000 80 chrX:13045369-13045449 1.0000 80 chrII:238033-238113 1.0000 80 chrX:8878888-8878968 1.0000 80 chrII:2031518-2031598 1.0000 80 chrIV:17049446-17049526 1.0000 80 chrIV:13942199-13942279 1.0000 80 chrIV:9257024-9257104 1.0000 80 chrIII:4293334-4293414 1.0000 80 chrIV:58553-58633 1.0000 80 chrI:2601770-2601850 1.0000 80 chrV:19185174-19185254 1.0000 80 chrV:8711069-8711149 1.0000 80 chrV:15539405-15539485 1.0000 80 chrI:8213317-8213397 1.0000 80 chrII:4040557-4040637 1.0000 80 chrV:4368460-4368540 1.0000 80 chrI:3995029-3995109 1.0000 80 chrIII:4100596-4100676 1.0000 80 chrIII:5289873-5289953 1.0000 80 chrV:2893987-2894067 1.0000 80 chrV:2577350-2577430 1.0000 80 chrX:7746708-7746788 1.0000 80 chrIV:12314045-12314125 1.0000 80 chrIV:145748-145828 1.0000 80 chrX:15160367-15160447 1.0000 80 chrIII:734452-734532 1.0000 80 chrIII:5407579-5407659 1.0000 80 chrV:6934462-6934542 1.0000 80 chrIV:12068334-12068414 1.0000 80 chrIII:5654708-5654788 1.0000 80 chrIII:3239988-3240068 1.0000 80 chrIII:7799197-7799277 1.0000 80 chrII:15102947-15103027 1.0000 80 chrI:6275427-6275507 1.0000 80 chrII:2995559-2995639 1.0000 80 chrI:310050-310130 1.0000 80 chrIII:3482837-3482917 1.0000 80 chrII:1330358-1330438 1.0000 80 chrIV:5161564-5161644 1.0000 80 chrII:624463-624543 1.0000 80 chrV:11245540-11245620 1.0000 80 chrV:19781899-19781979 1.0000 80 chrV:14175439-14175519 1.0000 80 chrX:8256375-8256455 1.0000 80 chrI:3835035-3835115 1.0000 80 chrII:10326873-10326953 1.0000 80 chrII:282565-282645 1.0000 80 chrV:15770797-15770877 1.0000 80 chrIV:14926562-14926642 1.0000 80 chrI:7749081-7749161 1.0000 80 chrIV:9361582-9361662 1.0000 80 chrV:7261576-7261656 1.0000 80 chrI:3088177-3088257 1.0000 80 chrIV:14137592-14137672 1.0000 80 chrIV:12870503-12870583 1.0000 80 chrIV:12101475-12101555 1.0000 80 chrI:6273296-6273376 1.0000 80 chrI:13265919-13265999 1.0000 80 chrI:15006433-15006513 1.0000 80 chrI:5371214-5371294 1.0000 80 chrX:7310855-7310935 1.0000 80 chrV:9556503-9556583 1.0000 80 chrIV:675602-675682 1.0000 80 chrIII:5767927-5768007 1.0000 80 chrV:1220862-1220942 1.0000 80 chrIV:16788688-16788768 1.0000 80 chrX:2951447-2951527 1.0000 80 chrIII:2202732-2202812 1.0000 80 chrX:8656632-8656712 1.0000 80 chrI:469537-469617 1.0000 80 chrIV:15979797-15979877 1.0000 80 chrIV:5433338-5433418 1.0000 80 chrII:10776791-10776871 1.0000 80 chrI:3337162-3337242 1.0000 80 chrIV:7024981-7025061 1.0000 80 chrI:11066860-11066940 1.0000 80 chrI:4611768-4611848 1.0000 80 chrIII:8382389-8382469 1.0000 80 chrX:445548-445628 1.0000 80 chrX:9043308-9043388 1.0000 80 chrX:12512162-12512242 1.0000 80 chrX:6587017-6587097 1.0000 80 chrIV:14997169-14997249 1.0000 80 chrX:1390552-1390632 1.0000 80 chrIV:13752836-13752916 1.0000 80 chrV:11685966-11686046 1.0000 80 chrIV:15565033-15565113 1.0000 80 chrX:7097389-7097469 1.0000 80 chrIV:7312249-7312329 1.0000 80 chrIV:4506383-4506463 1.0000 80 chrIII:7703642-7703722 1.0000 80 chrIV:17238082-17238162 1.0000 80 chrV:20371536-20371616 1.0000 80 chrIV:1670288-1670368 1.0000 80 chrV:13354292-13354372 1.0000 80 chrI:342233-342313 1.0000 80 chrI:5624331-5624411 1.0000 80 chrIII:9713404-9713484 1.0000 80 chrV:20471959-20472039 1.0000 80 chrI:279645-279725 1.0000 80 chrI:8313748-8313828 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_zip-8/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/zip-8.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.313 C 0.183 G 0.178 T 0.325 Background letter frequencies (from file dataset with add-one prior applied): A 0.313 C 0.183 G 0.178 T 0.325 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TKACGTMA MEME-1 width = 8 sites = 236 llr = 2078 E-value = 4.7e-414 ******************************************************************************** -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::8:::3a pos.-specific C :::a:27: probability G :62:a::: matrix T a4:::8:: bits 2.5 ** 2.2 ** 2.0 ** 1.7 * ** * Relative 1.5 * ** * Entropy 1.2 ** ** ** (12.7 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus TG CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrV:20471959-20472039 12 1.10e-05 cccacatcga tgacgtca tgtgacaggc chrIII:9713404-9713484 7 1.10e-05 AGATGA TGACGTCA CACCTTCCAA chrIV:1670288-1670368 49 1.10e-05 CTCACTTCGA TGACGTCA TCATGGCTTC chrIV:7312249-7312329 29 1.10e-05 TGGAAAGTTA TGACGTCA TAACTTTCCA chrIV:15565033-15565113 40 1.10e-05 AATATGTGTA TGACGTCA TATTTTCGTG chrIV:13752836-13752916 51 1.10e-05 GAAAAAGTGA TGACGTCA TCGACTGAAA chrIV:14997169-14997249 35 1.10e-05 aatacatttg tgacgtca caaatgtatt chrIII:8382389-8382469 47 1.10e-05 AACTCTCCGA TGACGTCA TCGATCTTAT chrI:469537-469617 25 1.10e-05 ACCTTATCGA TGACGTCA TCACAATTCT chrIII:2202732-2202812 22 1.10e-05 ACCATCCATA TGACGTCA CAAGCAGCTC chrX:2951447-2951527 40 1.10e-05 aatacatttg tgacgtca caaatgtatt chrIV:16788688-16788768 34 1.10e-05 aatacatttg tgacgtca caaatgtatt chrX:7310855-7310935 38 1.10e-05 CAGCAAATGG TGACGTCA TCAATTTTAT chrI:13265919-13265999 15 1.10e-05 AATGCGAAGA TGACGTCA TAAATAGACT chrI:6273296-6273376 18 1.10e-05 CGTGTAATga tgacgtca tagattgcaa chrIV:12870503-12870583 23 1.10e-05 TGTTGATTTC TGACGTCA TATATGACAT chrIV:14137592-14137672 1 1.10e-05 . tgacgtca caaatgtatt chrI:3088177-3088257 18 1.10e-05 aatacagttg tgacgtca taattatatt chrV:19781899-19781979 56 1.10e-05 CTGACAATTA TGACGTCA CATTCATTTA chrII:624463-624543 30 1.10e-05 TTCCCCCGTA TGACGTCA TACTTGGAGC chrII:1330358-1330438 33 1.10e-05 TGTATAATTA TGACGTCA TCGGCGGCGG chrII:2995559-2995639 9 1.10e-05 ggtttTAG TGACGTCA TAATTTTTTA chrI:6275427-6275507 52 1.10e-05 ACTGTATAAG TGACGTCA TAGTTGAACT chrIII:3239988-3240068 18 1.10e-05 TCGAAAATTA TGACGTCA TCACCGCCGG chrV:6934462-6934542 23 1.10e-05 ATAGAAAATA TGACGTCA TACTAGTTTT chrIII:5407579-5407659 17 1.10e-05 TCAAGTAGGG TGACGTCA CAGGACGCCA chrIII:734452-734532 12 1.10e-05 TTGGCACAGG TGACGTCA TTCCATGAGA chrX:15160367-15160447 5 1.10e-05 tttg tgacgtca caaatgtatt chrIV:12314045-12314125 44 1.10e-05 gctacatttg tgacgtca caaatgtatt chrV:2893987-2894067 16 1.10e-05 TTCCAAAAAA TGACGTCA TCAAAGATGA chrII:4040557-4040637 25 1.10e-05 ATCGGAATGA TGACGTCA CATGTGCAAT chrV:15539405-15539485 61 1.10e-05 aatacatttg tgacgtca caaatgtatt chrV:19185174-19185254 32 1.10e-05 TTAATATTGA TGACGTCA TCAATGACGT chrI:2601770-2601850 19 1.10e-05 AAGAGGTTAG TGACGTCA CTCCTCTTCC chrIV:58553-58633 26 1.10e-05 aatacatttg tgacgtca caaatgtatt chrIV:9257024-9257104 22 1.10e-05 CAGAAAATAG TGACGTCA TACGTGATTT chrIV:17049446-17049526 26 1.10e-05 ACACCAAGTA TGACGTCA TAGCCCTGGT chrII:2031518-2031598 25 1.10e-05 TCCATGATGA TGACGTCA TCGATCAGGT chrII:238033-238113 11 1.10e-05 aatacatttg tgacgtca caaatgtatt chrX:13045369-13045449 42 1.10e-05 CAGCCATTTA TGACGTCA TAAATTGGAA chrIV:2257538-2257618 28 1.10e-05 TTGAAGCTGA TGACGTCA TCGATGATGA chrIV:669699-669779 37 1.10e-05 TTGTAACATA TGACGTCA TCCGCGGCAT chrII:12446417-12446497 42 1.10e-05 TTGTAGTCTA TGACGTCA TAAGGTTTTC chrIII:5627691-5627771 8 1.10e-05 acatttg tgacgtca caaatgtatt chrI:464786-464866 26 1.10e-05 TCCTGAGATG TGACGTCA TCAGGGGGAG chrIII:3351250-3351330 62 1.10e-05 CCTGAAAGTG TGACGTCA CACGCGACCT chrIII:3094853-3094933 22 1.10e-05 GCAAAACCGG TGACGTCA TCCAAAAAAC chrI:1287938-1288018 54 1.10e-05 AGACCATGGA TGACGTCA TTGTTCTTCC chrX:16618886-16618966 23 1.10e-05 aaaatgtatg tgacgtca caaatgtatt chrV:222167-222247 47 1.10e-05 aatacatttg tgacgtca caaatgtatt chrIV:15063948-15064028 49 1.10e-05 ACCTCAATTA TGACGTCA TCTGGTGGAG chrIII:8851216-8851296 54 1.10e-05 aatacatttg tgacgtca caaatgtatt chrV:13598529-13598609 30 1.10e-05 TGGATAATTA TGACGTCA CATTTGGAGC chrV:1053544-1053624 66 1.10e-05 aatacatttg tgacgtca caaatgt chrIV:16133935-16134015 9 1.10e-05 TGCATGTG TGACGTCA CGAGCAAACT chrI:12848405-12848485 23 1.10e-05 CCAACACAAG TGACGTCA TCAGTGACGT chrX:12996320-12996400 53 1.10e-05 aatacattta tgacgtca cgactgtatt chrIV:8654233-8654313 60 1.10e-05 GCCTGTCAAA TGACGTCA CAGTTTTTGA chrIII:5481048-5481128 62 1.10e-05 aatacatttg tgacgtca caaatgtatt chrIV:2455287-2455367 40 1.10e-05 TTCACACTAA TGACGTCA TCGGTGACGT chrI:6734489-6734569 40 1.10e-05 TTGTCAACTA TGACGTCA TAATCCATCA chrX:15831696-15831776 28 1.10e-05 tgttgagaaa tgacgtca taaatgtata chrI:644397-644477 31 1.10e-05 AGGTCATCAG TGACGTCA CACCTCTTCC chrX:15849026-15849106 69 1.10e-05 aattcagctg tgacgtca taaa chrIII:2800902-2800982 62 1.10e-05 GTACCTGTTG TGACGTCA TAATAAATTT chrI:15037585-15037665 5 1.10e-05 tttg tgacgtca caaatgtatt chrV:17979948-17980028 70 1.10e-05 GGGGGTGAAG TGACGTCA TCA chrX:89064-89144 34 1.10e-05 GGCAAATTTC TGACGTCA TTTGAAGCTG chrIV:3661276-3661356 20 1.10e-05 TTCATTTCCG TGACGTCA CACCCTAGCC chrIII:9497571-9497651 64 1.10e-05 tatacatttg tgacgtca caaatgtat chrIV:3710896-3710976 40 1.10e-05 TTTGATTTAG TGACGTCA TAGGTTTTTT chrIII:5967799-5967879 27 1.10e-05 TTCGAACGGG TGACGTCA TACTAATTTC chrI:13592269-13592349 16 1.10e-05 GGGGATGTAG TGACGTCA GAGCTGATGA chrI:1333661-1333741 21 1.10e-05 AGACTAAGGG TGACGTCA TCAATGTCTC chrIII:8303599-8303679 15 1.10e-05 TTTGGTAATA TGACGTCA CTCATGGTAC chrX:16068143-16068223 24 1.10e-05 aatacatttg tgacgtca caaatgtatt chrX:14366240-14366320 9 1.10e-05 tacattta tgacgtca caactgttta chrV:20235390-20235470 28 1.10e-05 CCACGTCATC TGACGTCA CTTTTGCGTA chrI:1285083-1285163 14 1.10e-05 TCGGAAAAAA TGACGTCA TTTCTCTTCC chrV:19853769-19853849 36 1.10e-05 CAATTAACAA TGACGTCA CCGCTGATGA chrI:13671909-13671989 32 1.10e-05 ATGCAAGTGA TGACGTCA CAAATTGATG chrV:4330979-4331059 69 1.10e-05 CACACCTCAT TGACGTCA CTTC chrI:10920537-10920617 14 1.10e-05 TTGAATGTTG TGACGTCA CTGGCTTCTC chrX:2777114-2777194 51 1.10e-05 aatacagttg tgacgtca taaatgtatt chrV:18163593-18163673 22 1.10e-05 TCCAGACAAG TGACGTCA TCGATGCGTG chrI:13390917-13390997 60 1.10e-05 AATGATTTGA TGACGTCA TCATGAATTC chrII:349908-349988 35 1.10e-05 AAATACTGTA TGACGTCA TGGTGATGAC chrIV:6793726-6793806 69 1.10e-05 tatacatttg tgacgtca caaa chrIII:3413596-3413676 40 1.10e-05 aatacagtta tgacgtca taaatgtatt chrV:14943057-14943137 46 1.10e-05 GGAGCAATGA TGACGTCA TCATATTAAC chrIII:13329070-13329150 65 1.10e-05 gaacagtgtg tgacgtca catttttc chrIII:7743342-7743422 19 1.10e-05 AATTAGCTGG TGACGTCA CAACAGGAAT chrIII:1579158-1579238 27 1.10e-05 CGTCGATAAA TGACGTCA TCAACGGGCG chrV:18536174-18536254 23 1.10e-05 GGAAATCGAA TGACGTCA TCGACAAGCT chrIV:2935353-2935433 47 1.10e-05 TTTACACTCG TGACGTCA CTCCTGATCG chrV:18094100-18094180 24 1.10e-05 TCATCATTAA TGACGTCA TCCACCACAT chrI:8314847-8314927 23 1.10e-05 CATTCCAGTA TGACGTCA TGCGATTTAT chrIV:2170491-2170571 34 1.10e-05 AATGGAACGA TGACGTCA TTGTTGAGTA chrIV:2461555-2461635 51 1.10e-05 TGGCTGCTGA TGACGTCA CCACTTCCTC chrX:15988736-15988816 32 1.10e-05 aatacagctg tgacgtca taaatgtatt chrV:18993176-18993256 24 1.10e-05 AAGATGAGGA TGACGTCA TCACCACCGA chrX:3139675-3139755 40 1.10e-05 aacacagtta tgacgtca taaatgtatt chrI:11277590-11277670 23 1.10e-05 AAGACGTGGA TGACGTCA CGAATGTTGA chrIV:5056348-5056428 23 1.10e-05 aatacattta tgacgtca ccgatgtgtt chrI:12791290-12791370 26 1.10e-05 AAAGAAGGTG TGACGTCA TCATCATCAA chrI:1007989-1008069 23 1.10e-05 TGAAGAAAAG TGACGTCA CAGATGGCCT chrIV:203080-203160 27 1.10e-05 gatacattta tgacgtca cagatgtatt chrIII:11350266-11350346 39 1.10e-05 TCATAAGTTA TGACGTCA CAGGTTTTGG chrV:20182470-20182550 28 1.10e-05 tgtattttaa tgacgtca caaccgtatt chrIII:5487246-5487326 9 1.10e-05 TGGTAGAA TGACGTCA CACACCATTT chrI:419641-419721 52 1.10e-05 GGAAGAGGAG TGACGTCA CACGTGGCCT chrI:12833373-12833453 3 1.10e-05 GA TGACGTCA CACCGACACG chrV:19174785-19174865 22 1.10e-05 TTACTAATGA TGACGTCA TCAACTACTT chrI:10932988-10933068 24 1.10e-05 AAGACGGCGA TGACGTCA CAATCATGCT chrX:5366772-5366852 42 1.10e-05 GTTTATGCTA TGACGTCA TAATTTACAT chrI:735266-735346 5 1.10e-05 GTTA TGACGTCA TGAATAATAA chrIV:3502521-3502601 30 1.10e-05 TTTTTATGGG TGACGTCA CACTTTCAAT chrIV:7012373-7012453 7 1.10e-05 gaaaaa tgacgtca caactgtatt chrI:8859461-8859541 71 1.10e-05 ATTCTAAAAG TGACGTCA CT chrX:13227937-13228017 11 1.10e-05 AGGCTGAGCG TGACGTCA TAATTGTTTA chrV:3896199-3896279 19 1.10e-05 TTAAATTTAA TGACGTCA CACAAGTTTA chrIII:358265-358345 10 1.10e-05 atgcaagta tgacgtca caactgtatt chrIV:16777074-16777154 40 1.10e-05 CATGTGCCTA TGACGTCA CCTCCCGAAA chrIII:3018981-3019061 47 1.10e-05 taaatagttg tgacgtca tttttccgac chrII:12966433-12966513 9 1.10e-05 TAATGTTG TGACGTCA TAACATATCA chrIV:4673491-4673571 22 1.10e-05 TTGAAAACGA TGACGTCA TCAGTCTCAT chrIV:4167455-4167535 22 1.10e-05 CTGGGACATA TGACGTCA CCACTTGTAG chrIV:12689451-12689531 19 1.10e-05 TTTTATGTGA TGACGTCA TCCTTTTTCT chrI:11254488-11254568 37 1.10e-05 CTGGGACATA TGACGTCA CCGTTTGTGG chrI:11102471-11102551 23 1.10e-05 TCACACATTA TGACGTCA TCACATGTac chrX:12659973-12660053 50 2.34e-05 AAGGATGTGC TGACGCCA TAATTTTCTA chrI:279645-279725 40 6.22e-05 GATAGAGAAG TTACGTCA TCTGGCTACC chrI:5624331-5624411 31 6.22e-05 GTTCATGTGA TGACGTAA TCATTGGAGG chrIV:17238082-17238162 33 6.22e-05 tgtagaaaaa ttacgtca caactgtatt chrII:10776791-10776871 7 6.22e-05 aggttg tgacgtaa tttttctaca chrX:8656632-8656712 52 6.22e-05 GACCACCCGA TTACGTCA TCATTGTGTG chrIII:5289873-5289953 47 6.22e-05 TTCCCGATTA TGACGTAA CATTTTTCCA chrIV:13942199-13942279 44 6.22e-05 aataaggttg tgacgtaa tttttctaca chrIV:7922455-7922535 10 6.22e-05 atacagttg tgacgtaa tttttctaca chrV:10366398-10366478 57 6.22e-05 TTTATGAATA TTACGTCA TAAAGCCATA chrIII:6837479-6837559 43 6.22e-05 TCGAGGCTTA TGACGTAA CAATAAGCGA chrIV:13441874-13441954 29 6.22e-05 aatacatgtg tgacgtaa tttttctaca chrIII:3738490-3738570 38 6.22e-05 aatacagttg tgacgtaa ttgttctaca chrIII:6975111-6975191 46 6.22e-05 aatacatgtg tgacgtaa tttttctaca chrI:8420739-8420819 38 6.22e-05 tgtagaaaaa ttacgtca cacatgtatt chrIV:6803453-6803533 17 6.22e-05 aatacagttg tgacgtaa tttttctgca chrI:1256874-1256954 12 6.22e-05 aatacagttg tgacgtaa tttttcgaca chrIII:10361615-10361695 22 6.22e-05 tgtaggaaaa ttacgtca caactgtatt chrX:1242922-1243002 15 6.22e-05 aatacagttg tgacgtaa tttttcttca chrII:9125717-9125797 71 6.22e-05 tgtagaaaaa ttacgtca ca chrIV:2137637-2137717 72 6.22e-05 ttacgagata ttacgtca a chrIV:7898069-7898149 39 6.22e-05 ACGTCATTTG TTACGTCA CGCTCAGAAA chrIV:3733446-3733526 60 6.22e-05 tgtagaaaaa ttacgtca cgactgtatt chrIII:4481946-4482026 6 6.22e-05 AAAAA TTACGTCA TATTCAAAAA chrII:11536083-11536163 17 6.22e-05 TGATAAAAAG TTACGTCA TAAGTTATTG chrV:13354292-13354372 41 1.10e-04 AATTTGTCGA TGACGCAA TCAAAGTAGA chrX:12512162-12512242 20 1.10e-04 GATAAATGTA TTGCGTCA TTATTGCTGT chrI:5371214-5371294 44 1.10e-04 TGATCACTGA TGACGCAA TCACTCATCT chrV:7261576-7261656 34 1.10e-04 CTTGCAATGA TGACGCAA TGATGACAAT chrI:7749081-7749161 31 1.10e-04 GGTGAGTCTA TGACGCAA CAAATAATTC chrIV:14926562-14926642 30 1.10e-04 CTAAAAATGA TTGCGTCA TACTTATTCA chrII:10326873-10326953 48 1.10e-04 TAGAATTTGA TGACGCAA CATTTTTTTT chrIII:3482837-3482917 51 1.10e-04 CTACAATTTA TTGCGTCA TCAAGGCTTC chrX:7746708-7746788 24 1.10e-04 TCTACCCTTG TTGCGTCA TAAGTTTTAA chrI:3995029-3995109 34 1.10e-04 TAATTTTTAA TTGCGTCA TAACATTGCT chrIII:4293334-4293414 44 1.10e-04 CTACTGATGA TGACGCAA CAACTCGTTT chrX:8878888-8878968 11 1.10e-04 CCAGACAAGA TTGCGTCA CCAAATGTAT chrI:5948493-5948573 48 1.10e-04 AACAGTTTTG TTGCGTCA TAGTTCGAAA chrV:7408679-7408759 34 1.10e-04 GAATAGGTCG TTGCGTCA TAATTGCAGT chrV:1555246-1555326 73 1.10e-04 TTTATTGATG TTGCGTCA chrII:5518214-5518294 56 1.10e-04 AAGAAAACGA TTGCGTCA TAATTATCGA chrII:10103371-10103451 20 1.10e-04 AGTTTTCAGA TGACGCAA CAATTATCGA chrII:3782468-3782548 10 1.10e-04 CTCCAACTA TGACGCAA CATCAATTGC chrX:9043308-9043388 33 1.44e-04 TTCGAAATTG TTACGTAA CAGTGAATTG chrIII:5767927-5768007 30 1.44e-04 caaacctcta TTACGTAA TCGTGTTCTC chrIV:675602-675682 20 1.44e-04 TAATAAAATA TTACGTAA TAGTTGTAGT chrX:8256375-8256455 27 1.44e-04 ATTTCAGTGA TTACGTAA TATGTTCTAT chrIV:145748-145828 28 1.44e-04 CCATAAATTA TTACGTAA TGCACTATGT chrV:11374077-11374157 24 1.44e-04 TGTAGTTTTA TTACGTAA TATTGATAAC chrX:7204334-7204414 33 1.44e-04 TCGCGTAATA TTACGTAA TATTACACGT chrIII:6478795-6478875 48 1.44e-04 CGACGGTCGG TTACGTAA CCAGCTCTCT chrIV:10777756-10777836 46 1.44e-04 TGCGTAATTG TTACGTAA TTATGATTTG chrV:20371536-20371616 17 1.95e-04 TTCTAAATTG TTGCGTAA TATTTAGCTC chrX:7097389-7097469 45 1.95e-04 CTGAAAAATA TTGCGTAA TGCAATTTGT chrIV:7024981-7025061 25 1.95e-04 CTTTTTTGTG TTGCGTAA TCATAAGGTG chrI:15006433-15006513 20 1.95e-04 agaatgcgta ttacgcaa catatttgac chrV:14175439-14175519 32 1.95e-04 TGGTTCTTAA TTGCGTAA TCATTCAATC chrIV:5161564-5161644 26 1.95e-04 ACGTAGTTCA TTGCGTAA TATATGTATT chrIII:5654708-5654788 48 1.95e-04 TATAAACAGA TTACGCAA TAGGGTCACA chrIII:6331370-6331450 22 1.95e-04 CCCTTTTGTA TTACGCAA TCATGGTCCT chrX:15814707-15814787 63 1.95e-04 AGCACATCTG TTACGCAA CAACAGAACG chrIII:6478415-6478495 30 1.95e-04 TGGAAAAACA TTACGCAA TCGATATGCA chrIII:8051997-8052077 27 1.95e-04 AAAGTCTCGA TTACGCAA TAGTTACATA chrI:7198981-7199061 48 1.95e-04 TCTCGAAGCA TTGCGTAA CAATATTCCC chrI:8313748-8313828 61 2.06e-04 aaaatgcgta ttgcgcaa caggtttgac chrI:342233-342313 36 2.06e-04 ataatgcgta ttgcgcaa catatatgac chrIII:7703642-7703722 26 2.06e-04 TGCTACTTCC TTGCGCAA CTCCATTTGG chrV:11685966-11686046 31 2.06e-04 gtcaaatatg ttgcgcaa tacgcatact chrX:1390552-1390632 35 2.06e-04 CCAATCCAAA TTGCGCAA CACAGCCAGC chrX:6587017-6587097 67 2.06e-04 CTTACAGAAG TTGCGCAA TCTTCA chrX:445548-445628 25 2.06e-04 CCACCTATTA TTGCGCAA CAGGAGTCGG chrI:3337162-3337242 13 2.06e-04 gtcaaatatg ttgcgcaa tacgcattct chrIV:5433338-5433418 43 2.06e-04 gtcatatatg ttgcgcaa tacgtattct chrV:1220862-1220942 51 2.06e-04 gtcaaatatg ttgcgcaa tacgcattct chrIV:12101475-12101555 37 2.06e-04 gtcaaatatg ttgcgcaa tatgcattct chrIV:9361582-9361662 23 2.06e-04 TTCACATTTG TTGCGCAA TAAAGTGCAG chrV:15770797-15770877 23 2.06e-04 agaatgcgta ttgcgcaa catatttgac chrI:3835035-3835115 51 2.06e-04 aataTATGAA TTGCGCAA TAACATGCAA chrI:310050-310130 39 2.06e-04 gtcgaatatg ttgcgcaa tacgcattct chrII:15102947-15103027 19 2.06e-04 ttgctatatg ttgcgcaa tacgcattct chrIII:7799197-7799277 38 2.06e-04 CCCACCAACC TTGCGCAA TTCTAGATTG chrIV:12068334-12068414 28 2.06e-04 TAGCTTGTTG TTGCGCAA TAGGATGTGA chrV:2577350-2577430 20 2.06e-04 aaaatgcgta ttgcgcaa catatttgac chrIII:4100596-4100676 39 2.06e-04 AACTAAAAAA TTGCGCAA CAATAAAATT chrV:4368460-4368540 26 2.06e-04 gtcaaatgtg ttgcgcaa tacgcattct chrI:8213317-8213397 15 2.06e-04 agaatgcgta ttgcgcaa catatcagac chrV:8711069-8711149 46 2.06e-04 agaatgcgta ttgcgcaa catatctgac chrX:3282160-3282240 60 2.06e-04 GCGTTACATA TTGCGCAA CAATTCGTGA chrV:10402618-10402698 43 2.06e-04 ACAAAAATGA TTGCGCAA TAGTGAAGAA chrX:14011422-14011502 31 2.06e-04 GCAACGATTA TTGCGCAA TAAAAAGTGG chrIII:5344720-5344800 58 2.06e-04 agaatgcata ttgcgcaa cacatttgac chrI:3691965-3692045 43 2.06e-04 ataatgcgta ttgcgcaa tatacttgac chrV:6705526-6705606 62 2.06e-04 gtcaaatatg ttgcgcaa tacgcatttt chrIII:3541252-3541332 40 2.06e-04 accgtattta ttgcgcaa cactcgaaca chrII:3681843-3681923 45 2.06e-04 ACTCTTTTTA TTGCGCAA CACGTAACAG chrI:131988-132068 25 2.06e-04 gtcaaatatg ttgcgcaa tacacatttc chrI:14674-14754 17 2.06e-04 tgcgtatata ttgcgcaa catatttgac chrII:6110148-6110228 47 2.06e-04 agaatgtgta ttgcgcaa catatGTTGT chrV:10769051-10769131 37 2.06e-04 gtcaaatata ttgcgcaa tacgtattca chrI:576936-577016 29 2.06e-04 TAGACGCGAA TTGCGCAA CGCGCGAAAA chrIV:3260375-3260455 28 2.06e-04 gtaaaatatg ttgcgcaa tacgccgact chrIII:8560557-8560637 44 2.06e-04 CTTTTACGAA TTGCGCAA TTAATAGTGT chrI:3507583-3507663 70 2.89e-04 ataaaaaatt tgatgtca cta chrV:9556503-9556583 35 3.49e-04 aataaaatgt ttccgtaa atcgacacta chrIII:9598942-9599022 26 3.49e-04 aataaattat ttccgtaa atcgacataa chrI:4611768-4611848 9 4.05e-04 ATGAGAAT TTTCGCCA TATCCTGGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:20471959-20472039 1.1e-05 11_[+1]_61 chrIII:9713404-9713484 1.1e-05 6_[+1]_66 chrIV:1670288-1670368 1.1e-05 48_[+1]_24 chrIV:7312249-7312329 1.1e-05 28_[+1]_44 chrIV:15565033-15565113 1.1e-05 39_[+1]_33 chrIV:13752836-13752916 1.1e-05 50_[+1]_22 chrIV:14997169-14997249 1.1e-05 34_[+1]_38 chrIII:8382389-8382469 1.1e-05 46_[+1]_26 chrI:469537-469617 1.1e-05 24_[+1]_48 chrIII:2202732-2202812 1.1e-05 21_[+1]_51 chrX:2951447-2951527 1.1e-05 39_[+1]_33 chrIV:16788688-16788768 1.1e-05 33_[+1]_39 chrX:7310855-7310935 1.1e-05 37_[+1]_35 chrI:13265919-13265999 1.1e-05 14_[+1]_58 chrI:6273296-6273376 1.1e-05 17_[+1]_55 chrIV:12870503-12870583 1.1e-05 22_[+1]_50 chrIV:14137592-14137672 1.1e-05 [+1]_72 chrI:3088177-3088257 1.1e-05 17_[+1]_55 chrV:19781899-19781979 1.1e-05 55_[+1]_17 chrII:624463-624543 1.1e-05 29_[+1]_43 chrII:1330358-1330438 1.1e-05 32_[+1]_40 chrII:2995559-2995639 1.1e-05 8_[+1]_64 chrI:6275427-6275507 1.1e-05 51_[+1]_21 chrIII:3239988-3240068 1.1e-05 17_[+1]_55 chrV:6934462-6934542 1.1e-05 22_[+1]_50 chrIII:5407579-5407659 1.1e-05 16_[+1]_56 chrIII:734452-734532 1.1e-05 11_[+1]_61 chrX:15160367-15160447 1.1e-05 4_[+1]_68 chrIV:12314045-12314125 1.1e-05 43_[+1]_29 chrV:2893987-2894067 1.1e-05 15_[+1]_57 chrII:4040557-4040637 1.1e-05 24_[+1]_48 chrV:15539405-15539485 1.1e-05 60_[+1]_12 chrV:19185174-19185254 1.1e-05 31_[+1]_41 chrI:2601770-2601850 1.1e-05 18_[+1]_54 chrIV:58553-58633 1.1e-05 25_[+1]_47 chrIV:9257024-9257104 1.1e-05 21_[+1]_51 chrIV:17049446-17049526 1.1e-05 25_[+1]_47 chrII:2031518-2031598 1.1e-05 24_[+1]_48 chrII:238033-238113 1.1e-05 10_[+1]_62 chrX:13045369-13045449 1.1e-05 41_[+1]_31 chrIV:2257538-2257618 1.1e-05 27_[+1]_45 chrIV:669699-669779 1.1e-05 36_[+1]_36 chrII:12446417-12446497 1.1e-05 41_[+1]_31 chrIII:5627691-5627771 1.1e-05 7_[+1]_65 chrI:464786-464866 1.1e-05 25_[+1]_47 chrIII:3351250-3351330 1.1e-05 61_[+1]_11 chrIII:3094853-3094933 1.1e-05 21_[+1]_51 chrI:1287938-1288018 1.1e-05 53_[+1]_19 chrX:16618886-16618966 1.1e-05 22_[+1]_50 chrV:222167-222247 1.1e-05 46_[+1]_26 chrIV:15063948-15064028 1.1e-05 48_[+1]_24 chrIII:8851216-8851296 1.1e-05 53_[+1]_19 chrV:13598529-13598609 1.1e-05 29_[+1]_43 chrV:1053544-1053624 1.1e-05 65_[+1]_7 chrIV:16133935-16134015 1.1e-05 8_[+1]_64 chrI:12848405-12848485 1.1e-05 22_[+1]_50 chrX:12996320-12996400 1.1e-05 52_[+1]_20 chrIV:8654233-8654313 1.1e-05 59_[+1]_13 chrIII:5481048-5481128 1.1e-05 61_[+1]_11 chrIV:2455287-2455367 1.1e-05 39_[+1]_33 chrI:6734489-6734569 1.1e-05 39_[+1]_33 chrX:15831696-15831776 1.1e-05 27_[+1]_45 chrI:644397-644477 1.1e-05 30_[+1]_42 chrX:15849026-15849106 1.1e-05 68_[+1]_4 chrIII:2800902-2800982 1.1e-05 61_[+1]_11 chrI:15037585-15037665 1.1e-05 4_[+1]_68 chrV:17979948-17980028 1.1e-05 69_[+1]_3 chrX:89064-89144 1.1e-05 33_[+1]_39 chrIV:3661276-3661356 1.1e-05 19_[+1]_53 chrIII:9497571-9497651 1.1e-05 63_[+1]_9 chrIV:3710896-3710976 1.1e-05 39_[+1]_33 chrIII:5967799-5967879 1.1e-05 26_[+1]_46 chrI:13592269-13592349 1.1e-05 15_[+1]_57 chrI:1333661-1333741 1.1e-05 20_[+1]_52 chrIII:8303599-8303679 1.1e-05 14_[+1]_58 chrX:16068143-16068223 1.1e-05 23_[+1]_49 chrX:14366240-14366320 1.1e-05 8_[+1]_64 chrV:20235390-20235470 1.1e-05 27_[+1]_45 chrI:1285083-1285163 1.1e-05 13_[+1]_59 chrV:19853769-19853849 1.1e-05 35_[+1]_37 chrI:13671909-13671989 1.1e-05 31_[+1]_41 chrV:4330979-4331059 1.1e-05 68_[+1]_4 chrI:10920537-10920617 1.1e-05 13_[+1]_59 chrX:2777114-2777194 1.1e-05 50_[+1]_22 chrV:18163593-18163673 1.1e-05 21_[+1]_51 chrI:13390917-13390997 1.1e-05 59_[+1]_13 chrII:349908-349988 1.1e-05 34_[+1]_38 chrIV:6793726-6793806 1.1e-05 68_[+1]_4 chrIII:3413596-3413676 1.1e-05 39_[+1]_33 chrV:14943057-14943137 1.1e-05 45_[+1]_27 chrIII:13329070-13329150 1.1e-05 64_[+1]_8 chrIII:7743342-7743422 1.1e-05 18_[+1]_54 chrIII:1579158-1579238 1.1e-05 26_[+1]_46 chrV:18536174-18536254 1.1e-05 22_[+1]_50 chrIV:2935353-2935433 1.1e-05 46_[+1]_26 chrV:18094100-18094180 1.1e-05 23_[+1]_49 chrI:8314847-8314927 1.1e-05 22_[+1]_50 chrIV:2170491-2170571 1.1e-05 33_[+1]_39 chrIV:2461555-2461635 1.1e-05 50_[+1]_22 chrX:15988736-15988816 1.1e-05 31_[+1]_41 chrV:18993176-18993256 1.1e-05 23_[+1]_49 chrX:3139675-3139755 1.1e-05 39_[+1]_33 chrI:11277590-11277670 1.1e-05 22_[+1]_50 chrIV:5056348-5056428 1.1e-05 22_[+1]_50 chrI:12791290-12791370 1.1e-05 25_[+1]_47 chrI:1007989-1008069 1.1e-05 22_[+1]_50 chrIV:203080-203160 1.1e-05 26_[+1]_46 chrIII:11350266-11350346 1.1e-05 38_[+1]_34 chrV:20182470-20182550 1.1e-05 27_[+1]_45 chrIII:5487246-5487326 1.1e-05 8_[+1]_64 chrI:419641-419721 1.1e-05 51_[+1]_21 chrI:12833373-12833453 1.1e-05 2_[+1]_70 chrV:19174785-19174865 1.1e-05 21_[+1]_51 chrI:10932988-10933068 1.1e-05 23_[+1]_49 chrX:5366772-5366852 1.1e-05 41_[+1]_31 chrI:735266-735346 1.1e-05 4_[+1]_68 chrIV:3502521-3502601 1.1e-05 29_[+1]_43 chrIV:7012373-7012453 1.1e-05 6_[+1]_66 chrI:8859461-8859541 1.1e-05 70_[+1]_2 chrX:13227937-13228017 1.1e-05 10_[+1]_62 chrV:3896199-3896279 1.1e-05 18_[+1]_54 chrIII:358265-358345 1.1e-05 9_[+1]_63 chrIV:16777074-16777154 1.1e-05 39_[+1]_33 chrIII:3018981-3019061 1.1e-05 46_[+1]_26 chrII:12966433-12966513 1.1e-05 8_[+1]_64 chrIV:4673491-4673571 1.1e-05 21_[+1]_51 chrIV:4167455-4167535 1.1e-05 21_[+1]_51 chrIV:12689451-12689531 1.1e-05 18_[+1]_54 chrI:11254488-11254568 1.1e-05 36_[+1]_36 chrI:11102471-11102551 1.1e-05 22_[+1]_50 chrX:12659973-12660053 2.3e-05 49_[+1]_23 chrI:279645-279725 6.2e-05 39_[+1]_33 chrI:5624331-5624411 6.2e-05 30_[+1]_42 chrIV:17238082-17238162 6.2e-05 32_[+1]_40 chrII:10776791-10776871 6.2e-05 6_[+1]_66 chrX:8656632-8656712 6.2e-05 51_[+1]_21 chrIII:5289873-5289953 6.2e-05 46_[+1]_26 chrIV:13942199-13942279 6.2e-05 43_[+1]_29 chrIV:7922455-7922535 6.2e-05 9_[+1]_63 chrV:10366398-10366478 6.2e-05 56_[+1]_16 chrIII:6837479-6837559 6.2e-05 42_[+1]_30 chrIV:13441874-13441954 6.2e-05 28_[+1]_44 chrIII:3738490-3738570 6.2e-05 37_[+1]_35 chrIII:6975111-6975191 6.2e-05 45_[+1]_27 chrI:8420739-8420819 6.2e-05 37_[+1]_35 chrIV:6803453-6803533 6.2e-05 16_[+1]_56 chrI:1256874-1256954 6.2e-05 11_[+1]_61 chrIII:10361615-10361695 6.2e-05 21_[+1]_51 chrX:1242922-1243002 6.2e-05 14_[+1]_58 chrII:9125717-9125797 6.2e-05 70_[+1]_2 chrIV:2137637-2137717 6.2e-05 71_[+1]_1 chrIV:7898069-7898149 6.2e-05 38_[+1]_34 chrIV:3733446-3733526 6.2e-05 59_[+1]_13 chrIII:4481946-4482026 6.2e-05 5_[+1]_67 chrII:11536083-11536163 6.2e-05 16_[+1]_56 chrV:13354292-13354372 0.00011 40_[+1]_32 chrX:12512162-12512242 0.00011 19_[+1]_53 chrI:5371214-5371294 0.00011 43_[+1]_29 chrV:7261576-7261656 0.00011 33_[+1]_39 chrI:7749081-7749161 0.00011 30_[+1]_42 chrIV:14926562-14926642 0.00011 29_[+1]_43 chrII:10326873-10326953 0.00011 47_[+1]_25 chrIII:3482837-3482917 0.00011 50_[+1]_22 chrX:7746708-7746788 0.00011 23_[+1]_49 chrI:3995029-3995109 0.00011 33_[+1]_39 chrIII:4293334-4293414 0.00011 43_[+1]_29 chrX:8878888-8878968 0.00011 10_[+1]_62 chrI:5948493-5948573 0.00011 47_[+1]_25 chrV:7408679-7408759 0.00011 33_[+1]_39 chrV:1555246-1555326 0.00011 72_[+1] chrII:5518214-5518294 0.00011 55_[+1]_17 chrII:10103371-10103451 0.00011 19_[+1]_53 chrII:3782468-3782548 0.00011 9_[+1]_63 chrX:9043308-9043388 0.00014 32_[+1]_40 chrIII:5767927-5768007 0.00014 29_[+1]_43 chrIV:675602-675682 0.00014 19_[+1]_53 chrX:8256375-8256455 0.00014 26_[+1]_46 chrIV:145748-145828 0.00014 27_[+1]_45 chrV:11374077-11374157 0.00014 23_[+1]_49 chrX:7204334-7204414 0.00014 32_[+1]_40 chrIII:6478795-6478875 0.00014 47_[+1]_25 chrIV:10777756-10777836 0.00014 45_[+1]_27 chrV:20371536-20371616 0.0002 16_[+1]_56 chrX:7097389-7097469 0.0002 44_[+1]_28 chrIV:7024981-7025061 0.0002 24_[+1]_48 chrI:15006433-15006513 0.0002 19_[+1]_53 chrV:14175439-14175519 0.0002 31_[+1]_41 chrIV:5161564-5161644 0.0002 25_[+1]_47 chrIII:5654708-5654788 0.0002 47_[+1]_25 chrIII:6331370-6331450 0.0002 21_[+1]_51 chrX:15814707-15814787 0.0002 62_[+1]_10 chrIII:6478415-6478495 0.0002 29_[+1]_43 chrIII:8051997-8052077 0.0002 26_[+1]_46 chrI:7198981-7199061 0.0002 47_[+1]_25 chrI:8313748-8313828 0.00021 60_[+1]_12 chrI:342233-342313 0.00021 35_[+1]_37 chrIII:7703642-7703722 0.00021 25_[+1]_47 chrV:11685966-11686046 0.00021 30_[+1]_42 chrX:1390552-1390632 0.00021 34_[+1]_38 chrX:6587017-6587097 0.00021 66_[+1]_6 chrX:445548-445628 0.00021 24_[+1]_48 chrI:3337162-3337242 0.00021 12_[+1]_60 chrIV:5433338-5433418 0.00021 42_[+1]_30 chrV:1220862-1220942 0.00021 50_[+1]_22 chrIV:12101475-12101555 0.00021 36_[+1]_36 chrIV:9361582-9361662 0.00021 22_[+1]_50 chrV:15770797-15770877 0.00021 22_[+1]_50 chrI:3835035-3835115 0.00021 50_[+1]_22 chrI:310050-310130 0.00021 38_[+1]_34 chrII:15102947-15103027 0.00021 18_[+1]_54 chrIII:7799197-7799277 0.00021 37_[+1]_35 chrIV:12068334-12068414 0.00021 27_[+1]_45 chrV:2577350-2577430 0.00021 19_[+1]_53 chrIII:4100596-4100676 0.00021 38_[+1]_34 chrV:4368460-4368540 0.00021 25_[+1]_47 chrI:8213317-8213397 0.00021 14_[+1]_58 chrV:8711069-8711149 0.00021 45_[+1]_27 chrX:3282160-3282240 0.00021 59_[+1]_13 chrV:10402618-10402698 0.00021 42_[+1]_30 chrX:14011422-14011502 0.00021 30_[+1]_42 chrIII:5344720-5344800 0.00021 57_[+1]_15 chrI:3691965-3692045 0.00021 42_[+1]_30 chrV:6705526-6705606 0.00021 61_[+1]_11 chrIII:3541252-3541332 0.00021 39_[+1]_33 chrII:3681843-3681923 0.00021 44_[+1]_28 chrI:131988-132068 0.00021 24_[+1]_48 chrI:14674-14754 0.00021 16_[+1]_56 chrII:6110148-6110228 0.00021 46_[+1]_26 chrV:10769051-10769131 0.00021 36_[+1]_36 chrI:576936-577016 0.00021 28_[+1]_44 chrIV:3260375-3260455 0.00021 27_[+1]_45 chrIII:8560557-8560637 0.00021 43_[+1]_29 chrI:3507583-3507663 0.00029 69_[+1]_3 chrV:9556503-9556583 0.00035 34_[+1]_38 chrIII:9598942-9599022 0.00035 25_[+1]_47 chrI:4611768-4611848 0.00041 8_[+1]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TKACGTMA width=8 seqs=236 chrV:20471959-20472039 ( 12) TGACGTCA 1 chrIII:9713404-9713484 ( 7) TGACGTCA 1 chrIV:1670288-1670368 ( 49) TGACGTCA 1 chrIV:7312249-7312329 ( 29) TGACGTCA 1 chrIV:15565033-15565113 ( 40) TGACGTCA 1 chrIV:13752836-13752916 ( 51) TGACGTCA 1 chrIV:14997169-14997249 ( 35) TGACGTCA 1 chrIII:8382389-8382469 ( 47) TGACGTCA 1 chrI:469537-469617 ( 25) TGACGTCA 1 chrIII:2202732-2202812 ( 22) TGACGTCA 1 chrX:2951447-2951527 ( 40) TGACGTCA 1 chrIV:16788688-16788768 ( 34) TGACGTCA 1 chrX:7310855-7310935 ( 38) TGACGTCA 1 chrI:13265919-13265999 ( 15) TGACGTCA 1 chrI:6273296-6273376 ( 18) TGACGTCA 1 chrIV:12870503-12870583 ( 23) TGACGTCA 1 chrIV:14137592-14137672 ( 1) TGACGTCA 1 chrI:3088177-3088257 ( 18) TGACGTCA 1 chrV:19781899-19781979 ( 56) TGACGTCA 1 chrII:624463-624543 ( 30) TGACGTCA 1 chrII:1330358-1330438 ( 33) TGACGTCA 1 chrII:2995559-2995639 ( 9) TGACGTCA 1 chrI:6275427-6275507 ( 52) TGACGTCA 1 chrIII:3239988-3240068 ( 18) TGACGTCA 1 chrV:6934462-6934542 ( 23) TGACGTCA 1 chrIII:5407579-5407659 ( 17) TGACGTCA 1 chrIII:734452-734532 ( 12) TGACGTCA 1 chrX:15160367-15160447 ( 5) TGACGTCA 1 chrIV:12314045-12314125 ( 44) TGACGTCA 1 chrV:2893987-2894067 ( 16) TGACGTCA 1 chrII:4040557-4040637 ( 25) TGACGTCA 1 chrV:15539405-15539485 ( 61) TGACGTCA 1 chrV:19185174-19185254 ( 32) TGACGTCA 1 chrI:2601770-2601850 ( 19) TGACGTCA 1 chrIV:58553-58633 ( 26) TGACGTCA 1 chrIV:9257024-9257104 ( 22) TGACGTCA 1 chrIV:17049446-17049526 ( 26) TGACGTCA 1 chrII:2031518-2031598 ( 25) TGACGTCA 1 chrII:238033-238113 ( 11) TGACGTCA 1 chrX:13045369-13045449 ( 42) TGACGTCA 1 chrIV:2257538-2257618 ( 28) TGACGTCA 1 chrIV:669699-669779 ( 37) TGACGTCA 1 chrII:12446417-12446497 ( 42) TGACGTCA 1 chrIII:5627691-5627771 ( 8) TGACGTCA 1 chrI:464786-464866 ( 26) TGACGTCA 1 chrIII:3351250-3351330 ( 62) TGACGTCA 1 chrIII:3094853-3094933 ( 22) TGACGTCA 1 chrI:1287938-1288018 ( 54) TGACGTCA 1 chrX:16618886-16618966 ( 23) TGACGTCA 1 chrV:222167-222247 ( 47) TGACGTCA 1 chrIV:15063948-15064028 ( 49) TGACGTCA 1 chrIII:8851216-8851296 ( 54) TGACGTCA 1 chrV:13598529-13598609 ( 30) TGACGTCA 1 chrV:1053544-1053624 ( 66) TGACGTCA 1 chrIV:16133935-16134015 ( 9) TGACGTCA 1 chrI:12848405-12848485 ( 23) TGACGTCA 1 chrX:12996320-12996400 ( 53) TGACGTCA 1 chrIV:8654233-8654313 ( 60) TGACGTCA 1 chrIII:5481048-5481128 ( 62) TGACGTCA 1 chrIV:2455287-2455367 ( 40) TGACGTCA 1 chrI:6734489-6734569 ( 40) TGACGTCA 1 chrX:15831696-15831776 ( 28) TGACGTCA 1 chrI:644397-644477 ( 31) TGACGTCA 1 chrX:15849026-15849106 ( 69) TGACGTCA 1 chrIII:2800902-2800982 ( 62) TGACGTCA 1 chrI:15037585-15037665 ( 5) TGACGTCA 1 chrV:17979948-17980028 ( 70) TGACGTCA 1 chrX:89064-89144 ( 34) TGACGTCA 1 chrIV:3661276-3661356 ( 20) TGACGTCA 1 chrIII:9497571-9497651 ( 64) TGACGTCA 1 chrIV:3710896-3710976 ( 40) TGACGTCA 1 chrIII:5967799-5967879 ( 27) TGACGTCA 1 chrI:13592269-13592349 ( 16) TGACGTCA 1 chrI:1333661-1333741 ( 21) TGACGTCA 1 chrIII:8303599-8303679 ( 15) TGACGTCA 1 chrX:16068143-16068223 ( 24) TGACGTCA 1 chrX:14366240-14366320 ( 9) TGACGTCA 1 chrV:20235390-20235470 ( 28) TGACGTCA 1 chrI:1285083-1285163 ( 14) TGACGTCA 1 chrV:19853769-19853849 ( 36) TGACGTCA 1 chrI:13671909-13671989 ( 32) TGACGTCA 1 chrV:4330979-4331059 ( 69) TGACGTCA 1 chrI:10920537-10920617 ( 14) TGACGTCA 1 chrX:2777114-2777194 ( 51) TGACGTCA 1 chrV:18163593-18163673 ( 22) TGACGTCA 1 chrI:13390917-13390997 ( 60) TGACGTCA 1 chrII:349908-349988 ( 35) TGACGTCA 1 chrIV:6793726-6793806 ( 69) TGACGTCA 1 chrIII:3413596-3413676 ( 40) TGACGTCA 1 chrV:14943057-14943137 ( 46) TGACGTCA 1 chrIII:13329070-13329150 ( 65) TGACGTCA 1 chrIII:7743342-7743422 ( 19) TGACGTCA 1 chrIII:1579158-1579238 ( 27) TGACGTCA 1 chrV:18536174-18536254 ( 23) TGACGTCA 1 chrIV:2935353-2935433 ( 47) TGACGTCA 1 chrV:18094100-18094180 ( 24) TGACGTCA 1 chrI:8314847-8314927 ( 23) TGACGTCA 1 chrIV:2170491-2170571 ( 34) TGACGTCA 1 chrIV:2461555-2461635 ( 51) TGACGTCA 1 chrX:15988736-15988816 ( 32) TGACGTCA 1 chrV:18993176-18993256 ( 24) TGACGTCA 1 chrX:3139675-3139755 ( 40) TGACGTCA 1 chrI:11277590-11277670 ( 23) TGACGTCA 1 chrIV:5056348-5056428 ( 23) TGACGTCA 1 chrI:12791290-12791370 ( 26) TGACGTCA 1 chrI:1007989-1008069 ( 23) TGACGTCA 1 chrIV:203080-203160 ( 27) TGACGTCA 1 chrIII:11350266-11350346 ( 39) TGACGTCA 1 chrV:20182470-20182550 ( 28) TGACGTCA 1 chrIII:5487246-5487326 ( 9) TGACGTCA 1 chrI:419641-419721 ( 52) TGACGTCA 1 chrI:12833373-12833453 ( 3) TGACGTCA 1 chrV:19174785-19174865 ( 22) TGACGTCA 1 chrI:10932988-10933068 ( 24) TGACGTCA 1 chrX:5366772-5366852 ( 42) TGACGTCA 1 chrI:735266-735346 ( 5) TGACGTCA 1 chrIV:3502521-3502601 ( 30) TGACGTCA 1 chrIV:7012373-7012453 ( 7) TGACGTCA 1 chrI:8859461-8859541 ( 71) TGACGTCA 1 chrX:13227937-13228017 ( 11) TGACGTCA 1 chrV:3896199-3896279 ( 19) TGACGTCA 1 chrIII:358265-358345 ( 10) TGACGTCA 1 chrIV:16777074-16777154 ( 40) TGACGTCA 1 chrIII:3018981-3019061 ( 47) TGACGTCA 1 chrII:12966433-12966513 ( 9) TGACGTCA 1 chrIV:4673491-4673571 ( 22) TGACGTCA 1 chrIV:4167455-4167535 ( 22) TGACGTCA 1 chrIV:12689451-12689531 ( 19) TGACGTCA 1 chrI:11254488-11254568 ( 37) TGACGTCA 1 chrI:11102471-11102551 ( 23) TGACGTCA 1 chrX:12659973-12660053 ( 50) TGACGCCA 1 chrI:279645-279725 ( 40) TTACGTCA 1 chrI:5624331-5624411 ( 31) TGACGTAA 1 chrIV:17238082-17238162 ( 33) TTACGTCA 1 chrII:10776791-10776871 ( 7) TGACGTAA 1 chrX:8656632-8656712 ( 52) TTACGTCA 1 chrIII:5289873-5289953 ( 47) TGACGTAA 1 chrIV:13942199-13942279 ( 44) TGACGTAA 1 chrIV:7922455-7922535 ( 10) TGACGTAA 1 chrV:10366398-10366478 ( 57) TTACGTCA 1 chrIII:6837479-6837559 ( 43) TGACGTAA 1 chrIV:13441874-13441954 ( 29) TGACGTAA 1 chrIII:3738490-3738570 ( 38) TGACGTAA 1 chrIII:6975111-6975191 ( 46) TGACGTAA 1 chrI:8420739-8420819 ( 38) TTACGTCA 1 chrIV:6803453-6803533 ( 17) TGACGTAA 1 chrI:1256874-1256954 ( 12) TGACGTAA 1 chrIII:10361615-10361695 ( 22) TTACGTCA 1 chrX:1242922-1243002 ( 15) TGACGTAA 1 chrII:9125717-9125797 ( 71) TTACGTCA 1 chrIV:2137637-2137717 ( 72) TTACGTCA 1 chrIV:7898069-7898149 ( 39) TTACGTCA 1 chrIV:3733446-3733526 ( 60) TTACGTCA 1 chrIII:4481946-4482026 ( 6) TTACGTCA 1 chrII:11536083-11536163 ( 17) TTACGTCA 1 chrV:13354292-13354372 ( 41) TGACGCAA 1 chrX:12512162-12512242 ( 20) TTGCGTCA 1 chrI:5371214-5371294 ( 44) TGACGCAA 1 chrV:7261576-7261656 ( 34) TGACGCAA 1 chrI:7749081-7749161 ( 31) TGACGCAA 1 chrIV:14926562-14926642 ( 30) TTGCGTCA 1 chrII:10326873-10326953 ( 48) TGACGCAA 1 chrIII:3482837-3482917 ( 51) TTGCGTCA 1 chrX:7746708-7746788 ( 24) TTGCGTCA 1 chrI:3995029-3995109 ( 34) TTGCGTCA 1 chrIII:4293334-4293414 ( 44) TGACGCAA 1 chrX:8878888-8878968 ( 11) TTGCGTCA 1 chrI:5948493-5948573 ( 48) TTGCGTCA 1 chrV:7408679-7408759 ( 34) TTGCGTCA 1 chrV:1555246-1555326 ( 73) TTGCGTCA 1 chrII:5518214-5518294 ( 56) TTGCGTCA 1 chrII:10103371-10103451 ( 20) TGACGCAA 1 chrII:3782468-3782548 ( 10) TGACGCAA 1 chrX:9043308-9043388 ( 33) TTACGTAA 1 chrIII:5767927-5768007 ( 30) TTACGTAA 1 chrIV:675602-675682 ( 20) TTACGTAA 1 chrX:8256375-8256455 ( 27) TTACGTAA 1 chrIV:145748-145828 ( 28) TTACGTAA 1 chrV:11374077-11374157 ( 24) TTACGTAA 1 chrX:7204334-7204414 ( 33) TTACGTAA 1 chrIII:6478795-6478875 ( 48) TTACGTAA 1 chrIV:10777756-10777836 ( 46) TTACGTAA 1 chrV:20371536-20371616 ( 17) TTGCGTAA 1 chrX:7097389-7097469 ( 45) TTGCGTAA 1 chrIV:7024981-7025061 ( 25) TTGCGTAA 1 chrI:15006433-15006513 ( 20) TTACGCAA 1 chrV:14175439-14175519 ( 32) TTGCGTAA 1 chrIV:5161564-5161644 ( 26) TTGCGTAA 1 chrIII:5654708-5654788 ( 48) TTACGCAA 1 chrIII:6331370-6331450 ( 22) TTACGCAA 1 chrX:15814707-15814787 ( 63) TTACGCAA 1 chrIII:6478415-6478495 ( 30) TTACGCAA 1 chrIII:8051997-8052077 ( 27) TTACGCAA 1 chrI:7198981-7199061 ( 48) TTGCGTAA 1 chrI:8313748-8313828 ( 61) TTGCGCAA 1 chrI:342233-342313 ( 36) TTGCGCAA 1 chrIII:7703642-7703722 ( 26) TTGCGCAA 1 chrV:11685966-11686046 ( 31) TTGCGCAA 1 chrX:1390552-1390632 ( 35) TTGCGCAA 1 chrX:6587017-6587097 ( 67) TTGCGCAA 1 chrX:445548-445628 ( 25) TTGCGCAA 1 chrI:3337162-3337242 ( 13) TTGCGCAA 1 chrIV:5433338-5433418 ( 43) TTGCGCAA 1 chrV:1220862-1220942 ( 51) TTGCGCAA 1 chrIV:12101475-12101555 ( 37) TTGCGCAA 1 chrIV:9361582-9361662 ( 23) TTGCGCAA 1 chrV:15770797-15770877 ( 23) TTGCGCAA 1 chrI:3835035-3835115 ( 51) TTGCGCAA 1 chrI:310050-310130 ( 39) TTGCGCAA 1 chrII:15102947-15103027 ( 19) TTGCGCAA 1 chrIII:7799197-7799277 ( 38) TTGCGCAA 1 chrIV:12068334-12068414 ( 28) TTGCGCAA 1 chrV:2577350-2577430 ( 20) TTGCGCAA 1 chrIII:4100596-4100676 ( 39) TTGCGCAA 1 chrV:4368460-4368540 ( 26) TTGCGCAA 1 chrI:8213317-8213397 ( 15) TTGCGCAA 1 chrV:8711069-8711149 ( 46) TTGCGCAA 1 chrX:3282160-3282240 ( 60) TTGCGCAA 1 chrV:10402618-10402698 ( 43) TTGCGCAA 1 chrX:14011422-14011502 ( 31) TTGCGCAA 1 chrIII:5344720-5344800 ( 58) TTGCGCAA 1 chrI:3691965-3692045 ( 43) TTGCGCAA 1 chrV:6705526-6705606 ( 62) TTGCGCAA 1 chrIII:3541252-3541332 ( 40) TTGCGCAA 1 chrII:3681843-3681923 ( 45) TTGCGCAA 1 chrI:131988-132068 ( 25) TTGCGCAA 1 chrI:14674-14754 ( 17) TTGCGCAA 1 chrII:6110148-6110228 ( 47) TTGCGCAA 1 chrV:10769051-10769131 ( 37) TTGCGCAA 1 chrI:576936-577016 ( 29) TTGCGCAA 1 chrIV:3260375-3260455 ( 28) TTGCGCAA 1 chrIII:8560557-8560637 ( 44) TTGCGCAA 1 chrI:3507583-3507663 ( 70) TGATGTCA 1 chrV:9556503-9556583 ( 35) TTCCGTAA 1 chrIII:9598942-9599022 ( 26) TTCCGTAA 1 chrI:4611768-4611848 ( 9) TTTCGCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.91877 E= 4.7e-414 -1453 -1453 -1453 162 -1453 -1453 185 13 128 -443 36 -626 -1453 244 -1453 -626 -1453 -1453 249 -1453 -1453 32 -1453 124 13 184 -1453 -1453 167 -1453 -1453 -1453 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 236 E= 4.7e-414 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.644068 0.355932 0.758475 0.008475 0.228814 0.004237 0.000000 0.995763 0.000000 0.004237 0.000000 0.000000 1.000000 0.000000 0.000000 0.228814 0.000000 0.771186 0.343220 0.656780 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKACGTMA MEME-1 regular expression -------------------------------------------------------------------------------- T[GT][AG]CG[TC][CA]A -------------------------------------------------------------------------------- Time 4.81 secs. ******************************************************************************** ******************************************************************************** MOTIF TGACGTCA MEME-2 width = 8 sites = 79 llr = 772 E-value = 1.7e-102 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::a:1:1a pos.-specific C :::a::9: probability G :8::9::: matrix T a2:::a:: bits 2.5 * 2.2 * 2.0 ** 1.7 * ***** Relative 1.5 ******** Entropy 1.2 ******** (14.1 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrV:20471959-20472039 60 1.10e-05 gtattgggtg tgacgtca caaaaacaaa chrIII:5407579-5407659 50 1.10e-05 AAAACGCGCG TGACGTCA CTCGTCTTCA chrV:2893987-2894067 63 1.10e-05 AAAATAAATG TGACGTCA CACAGTTTTA chrII:4040557-4040637 48 1.10e-05 GCAATTCCGT TGACGTCA TACTTCCAAA chrI:2601770-2601850 48 1.10e-05 CTTTCCCCAA TGACGTCA CCTTGTCGCA chrIV:9257024-9257104 48 1.10e-05 TTCAACTGTG TGACGTCA CAGGTTTCTG chrIV:2257538-2257618 9 1.10e-05 CAAATTTC TGACGTCA TTTGAAGCTG chrIII:3094853-3094933 50 1.10e-05 CACCGCCGAA tgacgtca cgacgactac chrIV:16133935-16134015 47 1.10e-05 GGAGCATTAA TGACGTCA TAAATTTGAA chrI:12848405-12848485 35 1.10e-05 ACGTCATCAG TGACGTCA CCTGTCCCAT chrIV:2455287-2455367 52 1.10e-05 ACGTCATCGG TGACGTCA GATGGGTTGG chrX:89064-89144 53 1.10e-05 TTGAAGCTGA TGACGTCA TCGATGATGA chrIV:3661276-3661356 41 1.10e-05 CCTAGCCCAA TGACGTCA TTTCTTCCAA chrIII:5967799-5967879 62 1.10e-05 GCAAAATGCG TGACGTCA TGCTTCACAA chrI:1333661-1333741 50 1.10e-05 AGACCACTGA TGACGTCA TAACTTGGCG chrIII:8303599-8303679 62 1.10e-05 AACATGATTG TGACGTCA TATTTCCAAA chrV:20235390-20235470 51 1.10e-05 GCGTAAACCA TGACGTCA TCATGATCGC chrI:1285083-1285163 52 1.10e-05 TTGAGATTTA TGACGTCA CCAGAAATCA chrV:19853769-19853849 51 1.10e-05 TCACCGCTGA TGACGTCA TAGCCCTGTT chrI:10920537-10920617 47 1.10e-05 AGAAGTCGTA TGACGTCA CACCGTGCAA chrV:18163593-18163673 45 1.10e-05 GCGTGGGCCG TGACGTCA TCCTTCTTTG chrII:349908-349988 49 1.10e-05 GTCATGGTGA TGACGTCA CAAAAGGCTA chrIII:7743342-7743422 48 1.10e-05 GTTGTGTTGA TGACGTCA CTATTGAAAA chrIII:1579158-1579238 50 1.10e-05 GGGCGCCAAG TGACGTCA TCGATGAGCT chrV:18536174-18536254 64 1.10e-05 AGCATTTGTG TGACGTCA TCGTTGGCT chrIV:2935353-2935433 26 1.10e-05 TTTTTATATG TGACGTCA CAATTTACAC chrI:8314847-8314927 48 1.10e-05 TATTTCTGAG TGACGTCA CACCATTTCC chrIV:2170491-2170571 52 1.10e-05 TTGTTGAGTA TGACGTCA CGGGTTTGGT chrV:18993176-18993256 51 1.10e-05 ATAACTTTGA TGACGTCA CCACGAGCTC chrI:11277590-11277670 44 1.10e-05 ATGTTGATGA TGACGTCA TTTTTGGTTC chrI:1007989-1008069 55 1.10e-05 ATCTCATCTA TGACGTCA CTTCTCTTCC chrIV:203080-203160 71 1.10e-05 tgtacagctg tgacgtca tt chrIII:11350266-11350346 24 1.10e-05 GCCAAACCGG TGACGTCA TAAGTTATGA chrV:20182470-20182550 60 1.10e-05 ctgtattgca tgacgtca tttctctata chrIII:5487246-5487326 51 1.10e-05 CAGCTGGATG TGACGTCA CATAAAGGAA chrI:12833373-12833453 48 1.10e-05 GTAACAGCAG TGACGTCA TAATTTCTGC chrX:5366772-5366852 10 1.10e-05 TGTATATTT TGACGTCA CATAATGCAT chrI:735266-735346 47 1.10e-05 AGGCCACGTG TGACGTCA CAGCAATCCC chrX:13227937-13228017 45 1.10e-05 AAAACCGGTA TGACGTCA CAATTTATCA chrV:3896199-3896279 51 1.10e-05 ACGATACGTG TGACGTCA TGCAATTCAA chrIV:16777074-16777154 61 1.10e-05 CCCGAAATGA TGACGTCA CCCGCTCCTA chrII:12966433-12966513 49 1.10e-05 CAAATTTCTA TGACGTCA TACAATTTAA chrIV:4673491-4673571 45 1.10e-05 CTCATTTGTG TGACGTCA CTCGTTTGGA chrIV:4167455-4167535 55 1.10e-05 GCCTGTCGAG TGACGTCA TCGTTAATCT chrIV:12689451-12689531 64 1.10e-05 AAAATGACTA TGACGTCA CAATTTCTG chrI:11254488-11254568 9 1.10e-05 GTTTTCTG TGACGTCA TACCCAAAAA chrI:11102471-11102551 47 1.10e-05 GTacatattg tgacgtca taaattggtt chrV:15539405-15539485 9 3.10e-05 tagaaaaa ttacgtca caaccttatt chrIII:8851216-8851296 2 3.10e-05 a ttacgtca caaccttatt chrIII:5481048-5481128 10 3.10e-05 gtagaaaaa ttacgtca caaccttatt chrX:15849026-15849106 17 3.10e-05 cgtagaaaaa ttacgtca caactgtatt chrV:17979948-17980028 10 3.10e-05 TTGTCGTAG TTACGTCA TCATCATCAT chrIII:9497571-9497651 22 3.10e-05 tgtagaaaaa ttacgtca caactgtata chrV:4330979-4331059 53 3.10e-05 AGCCAAACTA TTACGTCA CACCTCATTG chrIV:7898069-7898149 27 3.10e-05 CCAACCGAAC TTACGTCA TTTGTTACGT chrIV:6793726-6793806 17 3.10e-05 aaaagaaaaa ttacgtca caactgtatt chrV:19174785-19174865 70 3.10e-05 TCGATAACCG TTACGtca tcc chrIV:7012373-7012453 60 3.10e-05 aatacagttg ttacgtca taaatgtgtt chrIV:14137592-14137672 53 4.98e-05 aataaggttg tgacgtaa tacgtaattt chrX:15160367-15160447 57 4.98e-05 aatacagtcg tgacgtaa tttttctaca chrII:238033-238113 63 4.98e-05 aatacagctg tgacgtaa tttttctaca chrI:15037585-15037665 57 4.98e-05 aatacagtcg tgacgtaa tttttctaat chrI:13592269-13592349 57 4.98e-05 TCCCAAATTC TGACGTAA CCATCGTCCC chrX:14366240-14366320 57 4.98e-05 aatagagttg tgacgtaa tttttctaca chrI:419641-419721 24 4.98e-05 GGTCAAGTGA TGACGTAA TAGAGCGCGT chrIII:358265-358345 62 4.98e-05 aatacagttg tgacgtaa tttttacaca chrIII:3018981-3019061 16 4.98e-05 tatacattaa tgacgtaa tcacaactgt chrIII:2800902-2800982 30 5.61e-05 ATACAATTTA TGGCGTCA CAAACTGTAT chrIV:12870503-12870583 35 7.54e-05 ACGTCATATA TGACATCA CACATTTTAA chrX:8878888-8878968 63 7.54e-05 CAAGTACATA TGACATCA CTATTTTCCA chrI:1287938-1288018 26 7.54e-05 TTCAAATTGA TGACATCA CAAGGCTCCT chrIV:8654233-8654313 18 7.54e-05 TGTGATGTAA TGACATCA CATCCACTGG chrX:7310855-7310935 22 8.66e-05 GAGGTGCTAC TGACCTCA GCAAATGGTG chrI:464786-464866 48 8.66e-05 GGGGAGCCCG TGACCTCA TAGCTTCAAA chrI:13390917-13390997 44 1.21e-04 GGAAAACCAA TTACGTAA TGATTTGATG chrV:14943057-14943137 8 1.32e-04 TCAAGAA TTGCGTCA TGGCACGAAA chrI:10932988-10933068 54 1.32e-04 ATCACACGTC TTGCGTCA TTTCCCTTCT chrI:6275427-6275507 9 1.68e-04 ACTTACTG TTACATCA CTCGTGTCTA chrIV:3710896-3710976 8 1.68e-04 TACAACA TTACATCA TAAAACACTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:20471959-20472039 1.1e-05 59_[+2]_13 chrIII:5407579-5407659 1.1e-05 49_[+2]_23 chrV:2893987-2894067 1.1e-05 62_[+2]_10 chrII:4040557-4040637 1.1e-05 47_[+2]_25 chrI:2601770-2601850 1.1e-05 47_[+2]_25 chrIV:9257024-9257104 1.1e-05 47_[+2]_25 chrIV:2257538-2257618 1.1e-05 8_[+2]_64 chrIII:3094853-3094933 1.1e-05 49_[+2]_23 chrIV:16133935-16134015 1.1e-05 46_[+2]_26 chrI:12848405-12848485 1.1e-05 34_[+2]_38 chrIV:2455287-2455367 1.1e-05 51_[+2]_21 chrX:89064-89144 1.1e-05 52_[+2]_20 chrIV:3661276-3661356 1.1e-05 40_[+2]_32 chrIII:5967799-5967879 1.1e-05 61_[+2]_11 chrI:1333661-1333741 1.1e-05 49_[+2]_23 chrIII:8303599-8303679 1.1e-05 61_[+2]_11 chrV:20235390-20235470 1.1e-05 50_[+2]_22 chrI:1285083-1285163 1.1e-05 51_[+2]_21 chrV:19853769-19853849 1.1e-05 50_[+2]_22 chrI:10920537-10920617 1.1e-05 46_[+2]_26 chrV:18163593-18163673 1.1e-05 44_[+2]_28 chrII:349908-349988 1.1e-05 48_[+2]_24 chrIII:7743342-7743422 1.1e-05 47_[+2]_25 chrIII:1579158-1579238 1.1e-05 49_[+2]_23 chrV:18536174-18536254 1.1e-05 63_[+2]_9 chrIV:2935353-2935433 1.1e-05 25_[+2]_47 chrI:8314847-8314927 1.1e-05 47_[+2]_25 chrIV:2170491-2170571 1.1e-05 51_[+2]_21 chrV:18993176-18993256 1.1e-05 50_[+2]_22 chrI:11277590-11277670 1.1e-05 43_[+2]_29 chrI:1007989-1008069 1.1e-05 54_[+2]_18 chrIV:203080-203160 1.1e-05 70_[+2]_2 chrIII:11350266-11350346 1.1e-05 23_[+2]_49 chrV:20182470-20182550 1.1e-05 59_[+2]_13 chrIII:5487246-5487326 1.1e-05 50_[+2]_22 chrI:12833373-12833453 1.1e-05 47_[+2]_25 chrX:5366772-5366852 1.1e-05 9_[+2]_63 chrI:735266-735346 1.1e-05 46_[+2]_26 chrX:13227937-13228017 1.1e-05 44_[+2]_28 chrV:3896199-3896279 1.1e-05 50_[+2]_22 chrIV:16777074-16777154 1.1e-05 60_[+2]_12 chrII:12966433-12966513 1.1e-05 48_[+2]_24 chrIV:4673491-4673571 1.1e-05 44_[+2]_28 chrIV:4167455-4167535 1.1e-05 54_[+2]_18 chrIV:12689451-12689531 1.1e-05 63_[+2]_9 chrI:11254488-11254568 1.1e-05 8_[+2]_64 chrI:11102471-11102551 1.1e-05 46_[+2]_26 chrV:15539405-15539485 3.1e-05 8_[+2]_64 chrIII:8851216-8851296 3.1e-05 1_[+2]_71 chrIII:5481048-5481128 3.1e-05 9_[+2]_63 chrX:15849026-15849106 3.1e-05 16_[+2]_56 chrV:17979948-17980028 3.1e-05 9_[+2]_63 chrIII:9497571-9497651 3.1e-05 21_[+2]_51 chrV:4330979-4331059 3.1e-05 52_[+2]_20 chrIV:7898069-7898149 3.1e-05 26_[+2]_46 chrIV:6793726-6793806 3.1e-05 16_[+2]_56 chrV:19174785-19174865 3.1e-05 69_[+2]_3 chrIV:7012373-7012453 3.1e-05 59_[+2]_13 chrIV:14137592-14137672 5e-05 52_[+2]_20 chrX:15160367-15160447 5e-05 56_[+2]_16 chrII:238033-238113 5e-05 62_[+2]_10 chrI:15037585-15037665 5e-05 56_[+2]_16 chrI:13592269-13592349 5e-05 56_[+2]_16 chrX:14366240-14366320 5e-05 56_[+2]_16 chrI:419641-419721 5e-05 23_[+2]_49 chrIII:358265-358345 5e-05 61_[+2]_11 chrIII:3018981-3019061 5e-05 15_[+2]_57 chrIII:2800902-2800982 5.6e-05 29_[+2]_43 chrIV:12870503-12870583 7.5e-05 34_[+2]_38 chrX:8878888-8878968 7.5e-05 62_[+2]_10 chrI:1287938-1288018 7.5e-05 25_[+2]_47 chrIV:8654233-8654313 7.5e-05 17_[+2]_55 chrX:7310855-7310935 8.7e-05 21_[+2]_51 chrI:464786-464866 8.7e-05 47_[+2]_25 chrI:13390917-13390997 0.00012 43_[+2]_29 chrV:14943057-14943137 0.00013 7_[+2]_65 chrI:10932988-10933068 0.00013 53_[+2]_19 chrI:6275427-6275507 0.00017 8_[+2]_64 chrIV:3710896-3710976 0.00017 7_[+2]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACGTCA width=8 seqs=79 chrV:20471959-20472039 ( 60) TGACGTCA 1 chrIII:5407579-5407659 ( 50) TGACGTCA 1 chrV:2893987-2894067 ( 63) TGACGTCA 1 chrII:4040557-4040637 ( 48) TGACGTCA 1 chrI:2601770-2601850 ( 48) TGACGTCA 1 chrIV:9257024-9257104 ( 48) TGACGTCA 1 chrIV:2257538-2257618 ( 9) TGACGTCA 1 chrIII:3094853-3094933 ( 50) TGACGTCA 1 chrIV:16133935-16134015 ( 47) TGACGTCA 1 chrI:12848405-12848485 ( 35) TGACGTCA 1 chrIV:2455287-2455367 ( 52) TGACGTCA 1 chrX:89064-89144 ( 53) TGACGTCA 1 chrIV:3661276-3661356 ( 41) TGACGTCA 1 chrIII:5967799-5967879 ( 62) TGACGTCA 1 chrI:1333661-1333741 ( 50) TGACGTCA 1 chrIII:8303599-8303679 ( 62) TGACGTCA 1 chrV:20235390-20235470 ( 51) TGACGTCA 1 chrI:1285083-1285163 ( 52) TGACGTCA 1 chrV:19853769-19853849 ( 51) TGACGTCA 1 chrI:10920537-10920617 ( 47) TGACGTCA 1 chrV:18163593-18163673 ( 45) TGACGTCA 1 chrII:349908-349988 ( 49) TGACGTCA 1 chrIII:7743342-7743422 ( 48) TGACGTCA 1 chrIII:1579158-1579238 ( 50) TGACGTCA 1 chrV:18536174-18536254 ( 64) TGACGTCA 1 chrIV:2935353-2935433 ( 26) TGACGTCA 1 chrI:8314847-8314927 ( 48) TGACGTCA 1 chrIV:2170491-2170571 ( 52) TGACGTCA 1 chrV:18993176-18993256 ( 51) TGACGTCA 1 chrI:11277590-11277670 ( 44) TGACGTCA 1 chrI:1007989-1008069 ( 55) TGACGTCA 1 chrIV:203080-203160 ( 71) TGACGTCA 1 chrIII:11350266-11350346 ( 24) TGACGTCA 1 chrV:20182470-20182550 ( 60) TGACGTCA 1 chrIII:5487246-5487326 ( 51) TGACGTCA 1 chrI:12833373-12833453 ( 48) TGACGTCA 1 chrX:5366772-5366852 ( 10) TGACGTCA 1 chrI:735266-735346 ( 47) TGACGTCA 1 chrX:13227937-13228017 ( 45) TGACGTCA 1 chrV:3896199-3896279 ( 51) TGACGTCA 1 chrIV:16777074-16777154 ( 61) TGACGTCA 1 chrII:12966433-12966513 ( 49) TGACGTCA 1 chrIV:4673491-4673571 ( 45) TGACGTCA 1 chrIV:4167455-4167535 ( 55) TGACGTCA 1 chrIV:12689451-12689531 ( 64) TGACGTCA 1 chrI:11254488-11254568 ( 9) TGACGTCA 1 chrI:11102471-11102551 ( 47) TGACGTCA 1 chrV:15539405-15539485 ( 9) TTACGTCA 1 chrIII:8851216-8851296 ( 2) TTACGTCA 1 chrIII:5481048-5481128 ( 10) TTACGTCA 1 chrX:15849026-15849106 ( 17) TTACGTCA 1 chrV:17979948-17980028 ( 10) TTACGTCA 1 chrIII:9497571-9497651 ( 22) TTACGTCA 1 chrV:4330979-4331059 ( 53) TTACGTCA 1 chrIV:7898069-7898149 ( 27) TTACGTCA 1 chrIV:6793726-6793806 ( 17) TTACGTCA 1 chrV:19174785-19174865 ( 70) TTACGTCA 1 chrIV:7012373-7012453 ( 60) TTACGTCA 1 chrIV:14137592-14137672 ( 53) TGACGTAA 1 chrX:15160367-15160447 ( 57) TGACGTAA 1 chrII:238033-238113 ( 63) TGACGTAA 1 chrI:15037585-15037665 ( 57) TGACGTAA 1 chrI:13592269-13592349 ( 57) TGACGTAA 1 chrX:14366240-14366320 ( 57) TGACGTAA 1 chrI:419641-419721 ( 24) TGACGTAA 1 chrIII:358265-358345 ( 62) TGACGTAA 1 chrIII:3018981-3019061 ( 16) TGACGTAA 1 chrIII:2800902-2800982 ( 30) TGGCGTCA 1 chrIV:12870503-12870583 ( 35) TGACATCA 1 chrX:8878888-8878968 ( 63) TGACATCA 1 chrI:1287938-1288018 ( 26) TGACATCA 1 chrIV:8654233-8654313 ( 18) TGACATCA 1 chrX:7310855-7310935 ( 22) TGACCTCA 1 chrI:464786-464866 ( 48) TGACCTCA 1 chrI:13390917-13390997 ( 44) TTACGTAA 1 chrV:14943057-14943137 ( 8) TTGCGTCA 1 chrI:10932988-10933068 ( 54) TTGCGTCA 1 chrI:6275427-6275507 ( 9) TTACATCA 1 chrIV:3710896-3710976 ( 8) TTACATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.78077 E= 1.7e-102 -1295 -1295 -1295 162 -1295 -1295 216 -68 162 -1295 -223 -1295 -1295 245 -1295 -1295 -204 -286 234 -1295 -1295 -1295 -1295 162 -131 225 -1295 -1295 167 -1295 -1295 -1295 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 79 E= 1.7e-102 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.797468 0.202532 0.962025 0.000000 0.037975 0.000000 0.000000 1.000000 0.000000 0.000000 0.075949 0.025316 0.898734 0.000000 0.000000 0.000000 0.000000 1.000000 0.126582 0.873418 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-2 regular expression -------------------------------------------------------------------------------- T[GT]ACGTCA -------------------------------------------------------------------------------- Time 7.98 secs. ******************************************************************************** ******************************************************************************** MOTIF ATGTATTT MEME-3 width = 8 sites = 44 llr = 410 E-value = 4.3e-029 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A a:::9::: pos.-specific C :::::::: probability G ::a::::: matrix T :a:a1aaa bits 2.5 * 2.2 * 2.0 * 1.7 *** *** Relative 1.5 **** *** Entropy 1.2 ******** (13.4 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ATGTATTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:17238082-17238162 66 6.32e-05 acataaaaac atgtattt taataca chrIV:14997169-14997249 16 6.32e-05 atataaaaac atgtattt aaatacattt chrX:2951447-2951527 21 6.32e-05 atgtagcaaa atgtattt aaatacattt chrIV:16788688-16788768 15 6.32e-05 acataaaaac atgtattt taatacattt chrIV:14137592-14137672 12 6.32e-05 gacgtcacaa atgtattt aaatacatgt chrIV:5161564-5161644 37 6.32e-05 TGCGTAATAT ATGTATTT GCCAAGTAAT chrX:15160367-15160447 16 6.32e-05 gacgtcacaa atgtattt aaatacatgt chrIV:12314045-12314125 25 6.32e-05 atataaaaac atgtattt agctacattt chrV:15539405-15539485 42 6.32e-05 agataaaaac atgtattt aaatacattt chrIV:58553-58633 37 6.32e-05 gacgtcacaa atgtattt aaatacattt chrIV:13942199-13942279 3 6.32e-05 aa atgtattt aaatacatgt chrII:238033-238113 22 6.32e-05 gacgtcacaa atgtattt aattacatgt chrI:5948493-5948573 66 6.32e-05 TAGTTCGAAA ATGTATTT TTAAAAT chrIII:5627691-5627771 19 6.32e-05 gacgtcacaa atgtattt aaatgcattt chrIII:6975111-6975191 6 6.32e-05 cacaa atgtattt aaatacatgt chrX:16618886-16618966 56 6.32e-05 acatgttttt atgtattt taatacagtt chrV:222167-222247 28 6.32e-05 atataaaaac atgtattt aaatacattt chrIII:8851216-8851296 35 6.32e-05 atataaaaac atgtattt aaatacattt chrI:8420739-8420819 49 6.32e-05 tacgtcacac atgtattt aaatacttga chrV:1053544-1053624 47 6.32e-05 atgtagcgaa atgtattt aaatacattt chrX:12996320-12996400 34 6.32e-05 atgttgagaa atgtattt aaatacattt chrIII:5481048-5481128 43 6.32e-05 agataaaaac atgtattt aaatacattt chrX:15831696-15831776 62 6.32e-05 catttaaaaa atgtattt taatacagtt chrIII:10361615-10361695 55 6.32e-05 atataaaaac atgtattt aaatacattt chrX:15849026-15849106 50 6.32e-05 acgtaaaagc atgtattt taattcagct chrI:15037585-15037665 16 6.32e-05 gacgtcacaa atgtattt aaatacatgt chrIII:9497571-9497651 45 6.32e-05 gtataaaaac atgtattt ttatacattt chrX:16068143-16068223 35 6.32e-05 gacgtcacaa atgtattt aaatacatgt chrX:7204334-7204414 69 6.32e-05 TCCAATATAA ATGTATTT TTCT chrX:2777114-2777194 32 6.32e-05 acatgtattc atgtattt caatacagtt chrIV:6793726-6793806 50 6.32e-05 acataaaaac atgtattt ttatacattt chrIII:3413596-3413676 21 6.32e-05 tacattaaaa atgtattt taatacagtt chrX:15988736-15988816 43 6.32e-05 gacgtcataa atgtattt atatacattt chrX:3139675-3139755 51 6.32e-05 gacgtcataa atgtattt aaatacattt chrIV:5056348-5056428 55 6.32e-05 acatgttttt atgtattt taatacagct chrIV:203080-203160 8 6.32e-05 tgtcaac atgtattt agatacattt chrV:20182470-20182550 17 6.32e-05 atgttgcaaa atgtattt taatgacgtc chrIV:7012373-7012453 41 6.32e-05 cataaaaaac atgtattt taatacagtt chrIII:358265-358345 43 6.32e-05 acatgttttg atgtattt taatacagtt chrI:7198981-7199061 20 6.32e-05 GCAACGGTGA ATGTATTT TTTGTGGGTA chrIV:13441874-13441954 2 1.29e-04 c atgttttt atttacttga chrIII:3738490-3738570 11 1.29e-04 atttgaatac atgttttt atatacttga chrX:14366240-14366320 28 1.29e-04 aactgtttac atgttttt ttttgtattt chrIII:3018981-3019061 30 1.66e-04 gtaatcacaa ctgtattt aaatagttgt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:17238082-17238162 6.3e-05 65_[+3]_7 chrIV:14997169-14997249 6.3e-05 15_[+3]_57 chrX:2951447-2951527 6.3e-05 20_[+3]_52 chrIV:16788688-16788768 6.3e-05 14_[+3]_58 chrIV:14137592-14137672 6.3e-05 11_[+3]_61 chrIV:5161564-5161644 6.3e-05 36_[+3]_36 chrX:15160367-15160447 6.3e-05 15_[+3]_57 chrIV:12314045-12314125 6.3e-05 24_[+3]_48 chrV:15539405-15539485 6.3e-05 41_[+3]_31 chrIV:58553-58633 6.3e-05 36_[+3]_36 chrIV:13942199-13942279 6.3e-05 2_[+3]_70 chrII:238033-238113 6.3e-05 21_[+3]_51 chrI:5948493-5948573 6.3e-05 65_[+3]_7 chrIII:5627691-5627771 6.3e-05 18_[+3]_54 chrIII:6975111-6975191 6.3e-05 5_[+3]_67 chrX:16618886-16618966 6.3e-05 55_[+3]_17 chrV:222167-222247 6.3e-05 27_[+3]_45 chrIII:8851216-8851296 6.3e-05 34_[+3]_38 chrI:8420739-8420819 6.3e-05 48_[+3]_24 chrV:1053544-1053624 6.3e-05 46_[+3]_26 chrX:12996320-12996400 6.3e-05 33_[+3]_39 chrIII:5481048-5481128 6.3e-05 42_[+3]_30 chrX:15831696-15831776 6.3e-05 61_[+3]_11 chrIII:10361615-10361695 6.3e-05 54_[+3]_18 chrX:15849026-15849106 6.3e-05 49_[+3]_23 chrI:15037585-15037665 6.3e-05 15_[+3]_57 chrIII:9497571-9497651 6.3e-05 44_[+3]_28 chrX:16068143-16068223 6.3e-05 34_[+3]_38 chrX:7204334-7204414 6.3e-05 68_[+3]_4 chrX:2777114-2777194 6.3e-05 31_[+3]_41 chrIV:6793726-6793806 6.3e-05 49_[+3]_23 chrIII:3413596-3413676 6.3e-05 20_[+3]_52 chrX:15988736-15988816 6.3e-05 42_[+3]_30 chrX:3139675-3139755 6.3e-05 50_[+3]_22 chrIV:5056348-5056428 6.3e-05 54_[+3]_18 chrIV:203080-203160 6.3e-05 7_[+3]_65 chrV:20182470-20182550 6.3e-05 16_[+3]_56 chrIV:7012373-7012453 6.3e-05 40_[+3]_32 chrIII:358265-358345 6.3e-05 42_[+3]_30 chrI:7198981-7199061 6.3e-05 19_[+3]_53 chrIV:13441874-13441954 0.00013 1_[+3]_71 chrIII:3738490-3738570 0.00013 10_[+3]_62 chrX:14366240-14366320 0.00013 27_[+3]_45 chrIII:3018981-3019061 0.00017 29_[+3]_43 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGTATTT width=8 seqs=44 chrIV:17238082-17238162 ( 66) ATGTATTT 1 chrIV:14997169-14997249 ( 16) ATGTATTT 1 chrX:2951447-2951527 ( 21) ATGTATTT 1 chrIV:16788688-16788768 ( 15) ATGTATTT 1 chrIV:14137592-14137672 ( 12) ATGTATTT 1 chrIV:5161564-5161644 ( 37) ATGTATTT 1 chrX:15160367-15160447 ( 16) ATGTATTT 1 chrIV:12314045-12314125 ( 25) ATGTATTT 1 chrV:15539405-15539485 ( 42) ATGTATTT 1 chrIV:58553-58633 ( 37) ATGTATTT 1 chrIV:13942199-13942279 ( 3) ATGTATTT 1 chrII:238033-238113 ( 22) ATGTATTT 1 chrI:5948493-5948573 ( 66) ATGTATTT 1 chrIII:5627691-5627771 ( 19) ATGTATTT 1 chrIII:6975111-6975191 ( 6) ATGTATTT 1 chrX:16618886-16618966 ( 56) ATGTATTT 1 chrV:222167-222247 ( 28) ATGTATTT 1 chrIII:8851216-8851296 ( 35) ATGTATTT 1 chrI:8420739-8420819 ( 49) ATGTATTT 1 chrV:1053544-1053624 ( 47) ATGTATTT 1 chrX:12996320-12996400 ( 34) ATGTATTT 1 chrIII:5481048-5481128 ( 43) ATGTATTT 1 chrX:15831696-15831776 ( 62) ATGTATTT 1 chrIII:10361615-10361695 ( 55) ATGTATTT 1 chrX:15849026-15849106 ( 50) ATGTATTT 1 chrI:15037585-15037665 ( 16) ATGTATTT 1 chrIII:9497571-9497651 ( 45) ATGTATTT 1 chrX:16068143-16068223 ( 35) ATGTATTT 1 chrX:7204334-7204414 ( 69) ATGTATTT 1 chrX:2777114-2777194 ( 32) ATGTATTT 1 chrIV:6793726-6793806 ( 50) ATGTATTT 1 chrIII:3413596-3413676 ( 21) ATGTATTT 1 chrX:15988736-15988816 ( 43) ATGTATTT 1 chrX:3139675-3139755 ( 51) ATGTATTT 1 chrIV:5056348-5056428 ( 55) ATGTATTT 1 chrIV:203080-203160 ( 8) ATGTATTT 1 chrV:20182470-20182550 ( 17) ATGTATTT 1 chrIV:7012373-7012453 ( 41) ATGTATTT 1 chrIII:358265-358345 ( 43) ATGTATTT 1 chrI:7198981-7199061 ( 20) ATGTATTT 1 chrIV:13441874-13441954 ( 2) ATGTTTTT 1 chrIII:3738490-3738570 ( 11) ATGTTTTT 1 chrX:14366240-14366320 ( 28) ATGTTTTT 1 chrIII:3018981-3019061 ( 30) CTGTATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.04855 E= 4.3e-029 164 -301 -1210 -1210 -1210 -1210 -1210 162 -1210 -1210 249 -1210 -1210 -1210 -1210 162 157 -1210 -1210 -225 -1210 -1210 -1210 162 -1210 -1210 -1210 162 -1210 -1210 -1210 162 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 44 E= 4.3e-029 0.977273 0.022727 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.931818 0.000000 0.000000 0.068182 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTATTT MEME-3 regular expression -------------------------------------------------------------------------------- ATGTATTT -------------------------------------------------------------------------------- Time 11.15 secs. ******************************************************************************** ******************************************************************************** MOTIF AAATACAT MEME-4 width = 8 sites = 38 llr = 344 E-value = 1.9e-017 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A 9a9:a:a: pos.-specific C 1:1::9:: probability G :::::1:: matrix T :::a:::a bits 2.5 2.2 2.0 * 1.7 * ***** Relative 1.5 ** ***** Entropy 1.2 ******** (13.1 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAATACAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:17238082-17238162 52 5.81e-05 aactgtatta aaatacat aaaaacatgt chrIV:14997169-14997249 54 5.81e-05 aaatgtattt aaatacat tttgctatat chrX:2951447-2951527 59 5.81e-05 aaatgtattt aaatacat gtttttatat chrIV:16788688-16788768 53 5.81e-05 aaatgtattt aaatacat tttgctacat chrIV:14137592-14137672 20 5.81e-05 aaatgtattt aaatacat gtttttatat chrI:3088177-3088257 37 5.81e-05 aattatattt aaatacat acattttctg chrIV:9361582-9361662 44 5.81e-05 AGTGCAGTTA AAATACAT GCAAACATTA chrX:15160367-15160447 24 5.81e-05 aaatgtattt aaatacat gtttttatat chrV:15539405-15539485 50 5.81e-05 acatgtattt aaatacat ttgtgacgtc chrIV:58553-58633 15 5.81e-05 acatgtattt aaatacat ttgtgacgtc chrIV:13942199-13942279 11 5.81e-05 aaatgtattt aaatacat gtttttatct chrIII:6975111-6975191 14 5.81e-05 aaatgtattt aaatacat gtttttttta chrX:16618886-16618966 42 5.81e-05 aaatgtatta aaatacat gtttttatgt chrV:222167-222247 66 5.81e-05 aaatgtattt aaatacat tttgcaa chrIII:8851216-8851296 73 5.81e-05 aaatgtattt aaatacat chrV:1053544-1053624 55 5.81e-05 aaatgtattt aaatacat ttgtgacgtc chrX:12996320-12996400 72 5.81e-05 gactgtatta aaatacat g chrIII:5481048-5481128 51 5.81e-05 acatgtattt aaatacat ttgtgacgtc chrX:15831696-15831776 47 5.81e-05 aaatgtataa aaatacat ttaaaaaatg chrIII:10361615-10361695 63 5.81e-05 acatgtattt aaatacat ttgtgacgtc chrI:15037585-15037665 24 5.81e-05 aaatgtattt aaatacat gtttttatat chrX:16068143-16068223 43 5.81e-05 aaatgtattt aaatacat gtttttgttt chrX:2777114-2777194 10 5.81e-05 actgtatta aaatacat aaaaacatgt chrIV:6793726-6793806 36 5.81e-05 aactgtatta aaatacat aaaaacatgt chrIII:3413596-3413676 59 5.81e-05 aaatgtattt aaatacat tttgcaaaat chrX:3139675-3139755 59 5.81e-05 aaatgtattt aaatacat tttgcaacat chrIV:5056348-5056428 41 5.81e-05 ccgatgtgtt aaatacat gtttttatgt chrIV:203080-203160 46 5.81e-05 agatgtatta aaatacat gttttaatgt chrIV:7012373-7012453 26 5.81e-05 aactgtatta aaatacat aaaaaacatg chrIII:358265-358345 29 5.81e-05 aactgtatta aaatacat gttttgatgt chrI:6273296-6273376 35 9.20e-05 atagattgca aactacat ttactacaag chrI:14674-14754 57 9.20e-05 tcgtagcgaa aactacat taattcttta chrV:1555246-1555326 36 9.20e-05 GATGTTGCGC AACTACAT TCAAACTCGT chrI:6734489-6734569 56 1.26e-04 CATAATCCAT CAATACAT AAACAGGTCT chrI:11102471-11102551 67 1.26e-04 aattggtttt caatacat atcgca chrIII:9713404-9713484 25 1.82e-04 CACCTTCCAA AAATAGAT ACAATTTCGG chrIII:8382389-8382469 28 1.82e-04 GAACGTTTCC AAATAGAT AAACTCTCCG chrIV:7024981-7025061 50 1.82e-04 GTGTGAGAAT AAATAGAT AATCATTTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:17238082-17238162 5.8e-05 51_[+4]_21 chrIV:14997169-14997249 5.8e-05 53_[+4]_19 chrX:2951447-2951527 5.8e-05 58_[+4]_14 chrIV:16788688-16788768 5.8e-05 52_[+4]_20 chrIV:14137592-14137672 5.8e-05 19_[+4]_53 chrI:3088177-3088257 5.8e-05 36_[+4]_36 chrIV:9361582-9361662 5.8e-05 43_[+4]_29 chrX:15160367-15160447 5.8e-05 23_[+4]_49 chrV:15539405-15539485 5.8e-05 49_[+4]_23 chrIV:58553-58633 5.8e-05 14_[+4]_58 chrIV:13942199-13942279 5.8e-05 10_[+4]_62 chrIII:6975111-6975191 5.8e-05 13_[+4]_59 chrX:16618886-16618966 5.8e-05 41_[+4]_31 chrV:222167-222247 5.8e-05 65_[+4]_7 chrIII:8851216-8851296 5.8e-05 72_[+4] chrV:1053544-1053624 5.8e-05 54_[+4]_18 chrX:12996320-12996400 5.8e-05 71_[+4]_1 chrIII:5481048-5481128 5.8e-05 50_[+4]_22 chrX:15831696-15831776 5.8e-05 46_[+4]_26 chrIII:10361615-10361695 5.8e-05 62_[+4]_10 chrI:15037585-15037665 5.8e-05 23_[+4]_49 chrX:16068143-16068223 5.8e-05 42_[+4]_30 chrX:2777114-2777194 5.8e-05 9_[+4]_63 chrIV:6793726-6793806 5.8e-05 35_[+4]_37 chrIII:3413596-3413676 5.8e-05 58_[+4]_14 chrX:3139675-3139755 5.8e-05 58_[+4]_14 chrIV:5056348-5056428 5.8e-05 40_[+4]_32 chrIV:203080-203160 5.8e-05 45_[+4]_27 chrIV:7012373-7012453 5.8e-05 25_[+4]_47 chrIII:358265-358345 5.8e-05 28_[+4]_44 chrI:6273296-6273376 9.2e-05 34_[+4]_38 chrI:14674-14754 9.2e-05 56_[+4]_16 chrV:1555246-1555326 9.2e-05 35_[+4]_37 chrI:6734489-6734569 0.00013 55_[+4]_17 chrI:11102471-11102551 0.00013 66_[+4]_6 chrIII:9713404-9713484 0.00018 24_[+4]_48 chrIII:8382389-8382469 0.00018 27_[+4]_45 chrIV:7024981-7025061 0.00018 49_[+4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAATACAT width=8 seqs=38 chrIV:17238082-17238162 ( 52) AAATACAT 1 chrIV:14997169-14997249 ( 54) AAATACAT 1 chrX:2951447-2951527 ( 59) AAATACAT 1 chrIV:16788688-16788768 ( 53) AAATACAT 1 chrIV:14137592-14137672 ( 20) AAATACAT 1 chrI:3088177-3088257 ( 37) AAATACAT 1 chrIV:9361582-9361662 ( 44) AAATACAT 1 chrX:15160367-15160447 ( 24) AAATACAT 1 chrV:15539405-15539485 ( 50) AAATACAT 1 chrIV:58553-58633 ( 15) AAATACAT 1 chrIV:13942199-13942279 ( 11) AAATACAT 1 chrIII:6975111-6975191 ( 14) AAATACAT 1 chrX:16618886-16618966 ( 42) AAATACAT 1 chrV:222167-222247 ( 66) AAATACAT 1 chrIII:8851216-8851296 ( 73) AAATACAT 1 chrV:1053544-1053624 ( 55) AAATACAT 1 chrX:12996320-12996400 ( 72) AAATACAT 1 chrIII:5481048-5481128 ( 51) AAATACAT 1 chrX:15831696-15831776 ( 47) AAATACAT 1 chrIII:10361615-10361695 ( 63) AAATACAT 1 chrI:15037585-15037665 ( 24) AAATACAT 1 chrX:16068143-16068223 ( 43) AAATACAT 1 chrX:2777114-2777194 ( 10) AAATACAT 1 chrIV:6793726-6793806 ( 36) AAATACAT 1 chrIII:3413596-3413676 ( 59) AAATACAT 1 chrX:3139675-3139755 ( 59) AAATACAT 1 chrIV:5056348-5056428 ( 41) AAATACAT 1 chrIV:203080-203160 ( 46) AAATACAT 1 chrIV:7012373-7012453 ( 26) AAATACAT 1 chrIII:358265-358345 ( 29) AAATACAT 1 chrI:6273296-6273376 ( 35) AACTACAT 1 chrI:14674-14754 ( 57) AACTACAT 1 chrV:1555246-1555326 ( 36) AACTACAT 1 chrI:6734489-6734569 ( 56) CAATACAT 1 chrI:11102471-11102551 ( 67) CAATACAT 1 chrIII:9713404-9713484 ( 25) AAATAGAT 1 chrIII:8382389-8382469 ( 28) AAATAGAT 1 chrIV:7024981-7025061 ( 50) AAATAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.09987 E= 1.9e-017 160 -180 -1189 -1189 167 -1189 -1189 -1189 156 -121 -1189 -1189 -1189 -1189 -1189 162 167 -1189 -1189 -1189 -1189 233 -117 -1189 167 -1189 -1189 -1189 -1189 -1189 -1189 162 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 38 E= 1.9e-017 0.947368 0.052632 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.921053 0.078947 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.921053 0.078947 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAT MEME-4 regular expression -------------------------------------------------------------------------------- AAATACAT -------------------------------------------------------------------------------- Time 14.32 secs. ******************************************************************************** ******************************************************************************** MOTIF TACTTGAA MEME-5 width = 8 sites = 34 llr = 308 E-value = 4.0e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :9::::aa pos.-specific C ::a::::: probability G :::21a:: matrix T a1:89::: bits 2.5 * * 2.2 * * 2.0 * * 1.7 * * * Relative 1.5 * * *** Entropy 1.2 *** **** (13.1 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TACTTGAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:4506383-4506463 35 3.43e-05 tttccgacac tacttgaa taaccccaTA chrIV:14997169-14997249 72 3.43e-05 tttgctatat tacttgaa t chrII:10776791-10776871 44 3.43e-05 tttccgacac tacttgaa taaccccaTA chrIV:15979797-15979877 33 3.43e-05 tttccgacat tacttgaa taaccccaTA chrIV:16788688-16788768 71 3.43e-05 tttgctacat tacttgaa tt chrIV:14137592-14137672 37 3.43e-05 tgtttttata tacttgaa taaggttgtg chrI:3088177-3088257 63 3.43e-05 tgacactact tacttgaa taaccccatt chrX:15160367-15160447 41 3.43e-05 tgtttttata tacttgaa tacagtcgtg chrIV:58553-58633 63 3.43e-05 tttgctacat tacttgaa taaccccatt chrIV:13942199-13942279 28 3.43e-05 tgtttttatc tacttgaa taaggttgtg chrII:238033-238113 47 3.43e-05 tgtttttgtt tacttgaa tacagctgtg chrIV:7922455-7922535 47 3.43e-05 ttttcgacac tacttgaa taaccccaTT chrIII:5627691-5627771 45 3.43e-05 tttgctacat tacttgaa taaccccaTT chrIV:13441874-13441954 13 3.43e-05 tgtttttatt tacttgaa tacatgtgtg chrIII:3738490-3738570 22 3.43e-05 tgtttttata tacttgaa tacagttgtg chrIII:6975111-6975191 30 3.43e-05 atgttttttt tacttgaa tacatgtgtg chrIII:5750662-5750742 36 3.43e-05 tttccgacac tacttgaa taaccccaTT chrI:8420739-8420819 60 3.43e-05 tgtatttaaa tacttgaa aacaggtgtg chrIV:6803453-6803533 1 3.43e-05 . tacttgaa tacagttgtg chrI:1256874-1256954 49 3.43e-05 tttccgacat tacttgaa taaccccaTA chrI:15037585-15037665 41 3.43e-05 tgtttttata tacttgaa tacagtcgtg chrX:1242922-1243002 53 3.43e-05 tttccgacac tacttgaa taattccaTT chrX:16068143-16068223 60 3.43e-05 tgtttttgtt tacttgaa tacagctgtg chrX:15988736-15988816 68 3.43e-05 tttgcaaaat tacttgaa taatc chrIII:8051997-8052077 1 5.31e-05 . TACGTGAA TGCTGCCTAA chrI:469537-469617 39 1.07e-04 GTCATCACAA TTCTTGAA AAACTGGGAA chrV:2893987-2894067 36 1.07e-04 AAAGATGACC TTCTTGAA TTGATCCACA chrI:8313748-8313828 31 1.18e-04 CCGATATtat tacgggaa cactaaattc chrV:8711069-8711149 16 1.18e-04 AGCGGATtgt tacgggaa cacaaagttc chrIII:5344720-5344800 28 1.18e-04 AATGCTTtat tacgggaa caaacaattc chrII:624463-624543 38 1.57e-04 TATGACGTCA TACTTGGA GCACCAAATA chrI:3691965-3692045 53 1.57e-04 ttgcgcaata tacttgac gagcaaatat chrIV:15565033-15565113 52 1.77e-04 ACGTCATATT TTCGTGAA GTTTCGATTT chrX:3282160-3282240 71 1.77e-04 TGCGCAACAA TTCGTGAA AA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:4506383-4506463 3.4e-05 34_[+5]_38 chrIV:14997169-14997249 3.4e-05 71_[+5]_1 chrII:10776791-10776871 3.4e-05 43_[+5]_29 chrIV:15979797-15979877 3.4e-05 32_[+5]_40 chrIV:16788688-16788768 3.4e-05 70_[+5]_2 chrIV:14137592-14137672 3.4e-05 36_[+5]_36 chrI:3088177-3088257 3.4e-05 62_[+5]_10 chrX:15160367-15160447 3.4e-05 40_[+5]_32 chrIV:58553-58633 3.4e-05 62_[+5]_10 chrIV:13942199-13942279 3.4e-05 27_[+5]_45 chrII:238033-238113 3.4e-05 46_[+5]_26 chrIV:7922455-7922535 3.4e-05 46_[+5]_26 chrIII:5627691-5627771 3.4e-05 44_[+5]_28 chrIV:13441874-13441954 3.4e-05 12_[+5]_60 chrIII:3738490-3738570 3.4e-05 21_[+5]_51 chrIII:6975111-6975191 3.4e-05 29_[+5]_43 chrIII:5750662-5750742 3.4e-05 35_[+5]_37 chrI:8420739-8420819 3.4e-05 59_[+5]_13 chrIV:6803453-6803533 3.4e-05 [+5]_72 chrI:1256874-1256954 3.4e-05 48_[+5]_24 chrI:15037585-15037665 3.4e-05 40_[+5]_32 chrX:1242922-1243002 3.4e-05 52_[+5]_20 chrX:16068143-16068223 3.4e-05 59_[+5]_13 chrX:15988736-15988816 3.4e-05 67_[+5]_5 chrIII:8051997-8052077 5.3e-05 [+5]_72 chrI:469537-469617 0.00011 38_[+5]_34 chrV:2893987-2894067 0.00011 35_[+5]_37 chrI:8313748-8313828 0.00012 30_[+5]_42 chrV:8711069-8711149 0.00012 15_[+5]_57 chrIII:5344720-5344800 0.00012 27_[+5]_45 chrII:624463-624543 0.00016 37_[+5]_35 chrI:3691965-3692045 0.00016 52_[+5]_20 chrIV:15565033-15565113 0.00018 51_[+5]_21 chrX:3282160-3282240 0.00018 70_[+5]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TACTTGAA width=8 seqs=34 chrIV:4506383-4506463 ( 35) TACTTGAA 1 chrIV:14997169-14997249 ( 72) TACTTGAA 1 chrII:10776791-10776871 ( 44) TACTTGAA 1 chrIV:15979797-15979877 ( 33) TACTTGAA 1 chrIV:16788688-16788768 ( 71) TACTTGAA 1 chrIV:14137592-14137672 ( 37) TACTTGAA 1 chrI:3088177-3088257 ( 63) TACTTGAA 1 chrX:15160367-15160447 ( 41) TACTTGAA 1 chrIV:58553-58633 ( 63) TACTTGAA 1 chrIV:13942199-13942279 ( 28) TACTTGAA 1 chrII:238033-238113 ( 47) TACTTGAA 1 chrIV:7922455-7922535 ( 47) TACTTGAA 1 chrIII:5627691-5627771 ( 45) TACTTGAA 1 chrIV:13441874-13441954 ( 13) TACTTGAA 1 chrIII:3738490-3738570 ( 22) TACTTGAA 1 chrIII:6975111-6975191 ( 30) TACTTGAA 1 chrIII:5750662-5750742 ( 36) TACTTGAA 1 chrI:8420739-8420819 ( 60) TACTTGAA 1 chrIV:6803453-6803533 ( 1) TACTTGAA 1 chrI:1256874-1256954 ( 49) TACTTGAA 1 chrI:15037585-15037665 ( 41) TACTTGAA 1 chrX:1242922-1243002 ( 53) TACTTGAA 1 chrX:16068143-16068223 ( 60) TACTTGAA 1 chrX:15988736-15988816 ( 68) TACTTGAA 1 chrIII:8051997-8052077 ( 1) TACGTGAA 1 chrI:469537-469617 ( 39) TTCTTGAA 1 chrV:2893987-2894067 ( 36) TTCTTGAA 1 chrI:8313748-8313828 ( 31) TACGGGAA 1 chrV:8711069-8711149 ( 16) TACGGGAA 1 chrIII:5344720-5344800 ( 28) TACGGGAA 1 chrII:624463-624543 ( 38) TACTTGGA 1 chrI:3691965-3692045 ( 53) TACTTGAC 1 chrIV:15565033-15565113 ( 52) TTCGTGAA 1 chrX:3282160-3282240 ( 71) TTCGTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.13512 E= 4.0e-012 -1173 -1173 -1173 162 149 -1173 -1173 -147 -1173 245 -1173 -1173 -1173 -1173 -1 134 -1173 -1173 -101 149 -1173 -1173 249 -1173 163 -1173 -260 -1173 163 -264 -1173 -1173 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 34 E= 4.0e-012 0.000000 0.000000 0.000000 1.000000 0.882353 0.000000 0.000000 0.117647 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.176471 0.823529 0.000000 0.000000 0.088235 0.911765 0.000000 0.000000 1.000000 0.000000 0.970588 0.000000 0.029412 0.000000 0.970588 0.029412 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACTTGAA MEME-5 regular expression -------------------------------------------------------------------------------- TACTTGAA -------------------------------------------------------------------------------- Time 17.29 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:11102471-11102551 1.69e-05 22_[+1(1.10e-05)]_16_[+1(1.10e-05)]_\ 26 chrI:11254488-11254568 4.74e-04 8_[+1(1.10e-05)]_20_[+1(1.10e-05)]_\ 25_[+1(1.10e-05)]_3 chrIV:12689451-12689531 8.82e-04 18_[+1(1.10e-05)]_37_[+1(1.10e-05)]_\ 9 chrIV:4167455-4167535 8.69e-05 21_[+1(1.10e-05)]_25_[+1(1.10e-05)]_\ 18 chrIV:4673491-4673571 6.86e-05 21_[+1(1.10e-05)]_15_[+1(1.10e-05)]_\ 28 chrII:12966433-12966513 2.13e-04 8_[+1(1.10e-05)]_32_[+1(1.10e-05)]_\ 24 chrIII:8560557-8560637 9.79e-02 80 chrII:3782468-3782548 1.14e-01 80 chrIII:3018981-3019061 7.20e-06 15_[+2(4.98e-05)]_23_[+1(1.10e-05)]_\ 26 chrI:7198981-7199061 1.47e-03 19_[+3(6.32e-05)]_53 chrII:11536083-11536163 1.84e-03 16_[+2(3.10e-05)]_56 chrIV:16777074-16777154 1.31e-03 18_[+2(7.54e-05)]_13_[+1(1.10e-05)]_\ 13_[+1(1.10e-05)]_12 chrIV:10777756-10777836 1.17e-02 80 chrIII:358265-358345 1.58e-07 9_[+1(1.10e-05)]_11_[+4(5.81e-05)]_\ 6_[+3(6.32e-05)]_11_[+2(4.98e-05)]_11 chrV:3896199-3896279 4.12e-04 18_[+1(1.10e-05)]_24_[+1(1.10e-05)]_\ 22 chrX:13227937-13228017 5.84e-04 10_[+1(1.10e-05)]_26_[+1(1.10e-05)]_\ 28 chrI:8859461-8859541 4.27e-04 70_[+1(1.10e-05)]_2 chrIV:7012373-7012453 1.28e-07 6_[+1(1.10e-05)]_11_[+4(5.81e-05)]_\ 7_[+3(6.32e-05)]_11_[+2(3.10e-05)]_13 chrIII:8051997-8052077 5.41e-04 [+5(5.31e-05)]_72 chrIV:3502521-3502601 1.49e-05 29_[+1(1.10e-05)]_43 chrI:735266-735346 5.31e-04 4_[+1(1.10e-05)]_34_[+1(1.10e-05)]_\ 26 chrX:5366772-5366852 6.41e-05 9_[+1(1.10e-05)]_24_[+1(1.10e-05)]_\ 31 chrI:10932988-10933068 4.77e-04 23_[+1(1.10e-05)]_49 chrV:19174785-19174865 1.68e-04 21_[+1(1.10e-05)]_40_[+2(3.10e-05)]_\ 3 chrI:12833373-12833453 5.05e-04 2_[+1(1.10e-05)]_37_[+1(1.10e-05)]_\ 25 chrI:419641-419721 5.68e-04 23_[+2(4.98e-05)]_20_[+1(1.10e-05)]_\ 21 chrIII:6478795-6478875 1.02e-02 80 chrIII:5487246-5487326 7.52e-04 8_[+1(1.10e-05)]_34_[+1(1.10e-05)]_\ 22 chrV:20182470-20182550 9.70e-06 16_[+3(6.32e-05)]_3_[+1(1.10e-05)]_\ 24_[+1(1.10e-05)]_13 chrIII:11350266-11350346 8.93e-04 23_[+1(1.10e-05)]_7_[+1(1.10e-05)]_\ 34 chrIV:203080-203160 2.19e-07 7_[+3(6.32e-05)]_11_[+1(1.10e-05)]_\ 11_[+4(5.81e-05)]_17_[+1(1.10e-05)]_2 chrI:1007989-1008069 9.09e-05 22_[+1(1.10e-05)]_24_[+1(1.10e-05)]_\ 18 chrI:12791290-12791370 8.52e-05 25_[+1(1.10e-05)]_47 chrIV:5056348-5056428 1.49e-07 11_[+4(5.81e-05)]_3_[+1(1.10e-05)]_\ 10_[+4(5.81e-05)]_6_[+3(6.32e-05)]_18 chrI:11277590-11277670 2.22e-04 22_[+1(1.10e-05)]_13_[+1(1.10e-05)]_\ 29 chrIII:4481946-4482026 1.62e-03 5_[+2(3.10e-05)]_67 chrX:3139675-3139755 3.34e-08 39_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ [+4(5.81e-05)]_14 chrV:18993176-18993256 9.84e-04 23_[+1(1.10e-05)]_19_[+1(1.10e-05)]_\ 22 chrX:15988736-15988816 1.74e-08 31_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ 17_[+5(3.43e-05)]_5 chrIV:2461555-2461635 6.05e-04 50_[+1(1.10e-05)]_22 chrIV:2170491-2170571 2.41e-04 33_[+1(1.10e-05)]_10_[+1(1.10e-05)]_\ 21 chrIII:6478415-6478495 1.15e-03 80 chrI:8314847-8314927 1.29e-04 22_[+1(1.10e-05)]_17_[+1(1.10e-05)]_\ 25 chrII:10103371-10103451 8.32e-02 80 chrV:18094100-18094180 8.71e-06 23_[+1(1.10e-05)]_49 chrIV:2935353-2935433 3.55e-04 25_[+1(1.10e-05)]_13_[+1(1.10e-05)]_\ 26 chrV:18536174-18536254 4.11e-04 22_[+1(1.10e-05)]_33_[+1(1.10e-05)]_\ 9 chrIII:1579158-1579238 1.10e-03 26_[+1(1.10e-05)]_15_[+1(1.10e-05)]_\ 23 chrIII:7743342-7743422 8.82e-04 18_[+1(1.10e-05)]_21_[+1(1.10e-05)]_\ 25 chrIII:13329070-13329150 2.40e-04 64_[+1(1.10e-05)]_8 chrV:14943057-14943137 1.39e-04 45_[+1(1.10e-05)]_27 chrIII:3413596-3413676 1.28e-07 7_[+4(5.81e-05)]_5_[+3(6.32e-05)]_\ 11_[+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_14 chrII:5518214-5518294 2.33e-02 80 chrIV:6793726-6793806 7.79e-08 16_[+2(3.10e-05)]_11_[+4(5.81e-05)]_\ 6_[+3(6.32e-05)]_11_[+1(1.10e-05)]_4 chrII:349908-349988 1.55e-04 34_[+1(1.10e-05)]_6_[+1(1.10e-05)]_\ 24 chrIV:3733446-3733526 7.31e-04 59_[+2(3.10e-05)]_13 chrI:13390917-13390997 1.59e-04 59_[+1(1.10e-05)]_13 chrV:18163593-18163673 4.01e-04 21_[+1(1.10e-05)]_15_[+1(1.10e-05)]_\ 28 chrIV:7898069-7898149 3.51e-03 26_[+2(3.10e-05)]_4_[+2(3.10e-05)]_\ 34 chrX:2777114-2777194 1.28e-07 9_[+4(5.81e-05)]_14_[+3(6.32e-05)]_\ 11_[+1(1.10e-05)]_3_[+3(6.32e-05)]_11 chrI:10920537-10920617 2.39e-04 13_[+1(1.10e-05)]_25_[+1(1.10e-05)]_\ 26 chrV:4330979-4331059 5.60e-05 52_[+2(3.10e-05)]_8_[+1(1.10e-05)]_\ 4 chrIV:2137637-2137717 1.25e-03 71_[+2(3.10e-05)]_1 chrI:13671909-13671989 3.36e-05 31_[+1(1.10e-05)]_41 chrV:19853769-19853849 5.48e-04 35_[+1(1.10e-05)]_7_[+1(1.10e-05)]_\ 22 chrI:1285083-1285163 2.67e-04 13_[+1(1.10e-05)]_30_[+1(1.10e-05)]_\ 21 chrV:20235390-20235470 4.44e-04 27_[+1(1.10e-05)]_15_[+1(1.10e-05)]_\ 22 chrX:14366240-14366320 2.24e-05 8_[+1(1.10e-05)]_40_[+2(4.98e-05)]_\ 16 chrX:7204334-7204414 5.23e-04 68_[+3(6.32e-05)]_4 chrX:16068143-16068223 1.39e-09 12_[+4(5.81e-05)]_3_[+1(1.10e-05)]_\ 3_[+3(6.32e-05)]_[+4(5.81e-05)]_9_[+5(3.43e-05)]_13 chrII:9125717-9125797 2.45e-03 70_[+2(3.10e-05)]_2 chrIII:8303599-8303679 2.26e-04 14_[+1(1.10e-05)]_39_[+1(1.10e-05)]_\ 11 chrI:1333661-1333741 5.45e-04 20_[+1(1.10e-05)]_21_[+1(1.10e-05)]_\ 23 chrIII:4390606-4390686 6.61e-01 80 chrIV:3260375-3260455 1.13e-01 80 chrI:13592269-13592349 2.69e-04 15_[+1(1.10e-05)]_33_[+2(4.98e-05)]_\ 16 chrIII:5967799-5967879 2.60e-04 26_[+1(1.10e-05)]_27_[+1(1.10e-05)]_\ 11 chrX:12659973-12660053 1.13e-02 49_[+1(2.34e-05)]_23 chrIV:3710896-3710976 3.29e-05 39_[+1(1.10e-05)]_33 chrX:1242922-1243002 2.94e-05 14_[+2(4.98e-05)]_30_[+5(3.43e-05)]_\ 20 chrI:576936-577016 2.23e-01 80 chrV:10769051-10769131 3.97e-02 80 chrIII:9497571-9497651 9.08e-07 21_[+2(3.10e-05)]_15_[+3(6.32e-05)]_\ 11_[+1(1.10e-05)]_9 chrII:6110148-6110228 1.40e-02 80 chrIV:3661276-3661356 4.43e-05 19_[+1(1.10e-05)]_13_[+1(1.10e-05)]_\ 32 chrIV:12428626-12428706 4.71e-01 80 chrX:89064-89144 3.27e-04 33_[+1(1.10e-05)]_11_[+1(1.10e-05)]_\ 20 chrV:17979948-17980028 1.01e-03 9_[+2(3.10e-05)]_52_[+1(1.10e-05)]_\ 3 chrII:10594471-10594551 5.31e-01 80 chrV:1555246-1555326 3.38e-04 35_[+4(9.20e-05)]_37 chrI:14674-14754 4.34e-03 56_[+4(9.20e-05)]_16 chrI:15037585-15037665 1.39e-09 4_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ [+4(5.81e-05)]_9_[+5(3.43e-05)]_8_[+2(4.98e-05)]_16 chrIII:2800902-2800982 2.05e-04 29_[+1(2.34e-05)]_24_[+1(1.10e-05)]_\ 11 chrX:15849026-15849106 3.97e-07 16_[+2(3.10e-05)]_25_[+3(6.32e-05)]_\ 11_[+1(1.10e-05)]_4 chrIII:10361615-10361695 8.14e-07 21_[+2(3.10e-05)]_25_[+3(6.32e-05)]_\ [+4(5.81e-05)]_10 chrI:644397-644477 4.03e-04 30_[+1(1.10e-05)]_42 chrI:131988-132068 1.56e-03 80 chrX:15831696-15831776 1.58e-07 27_[+1(1.10e-05)]_11_[+4(5.81e-05)]_\ 7_[+3(6.32e-05)]_11 chrI:1256874-1256954 5.64e-05 11_[+2(4.98e-05)]_29_[+5(3.43e-05)]_\ 24 chrI:6734489-6734569 1.78e-05 39_[+1(1.10e-05)]_33 chrIV:2455287-2455367 4.78e-04 39_[+1(1.10e-05)]_4_[+1(1.10e-05)]_\ 21 chrII:3681843-3681923 6.67e-02 80 chrIII:5481048-5481128 7.79e-08 9_[+2(3.10e-05)]_25_[+3(6.32e-05)]_\ [+4(5.81e-05)]_3_[+1(1.10e-05)]_3_[+3(6.32e-05)] chrV:11374077-11374157 4.23e-03 80 chrIII:3541252-3541332 4.05e-02 80 chrIV:8654233-8654313 2.27e-04 17_[+2(7.54e-05)]_34_[+1(1.10e-05)]_\ 13 chrIII:8369331-8369411 5.53e-01 80 chrX:12996320-12996400 1.58e-07 33_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_11_[+4(5.81e-05)]_1 chrI:12848405-12848485 5.81e-04 22_[+1(1.10e-05)]_4_[+1(1.10e-05)]_\ 38 chrV:6705526-6705606 6.09e-02 80 chrIV:6803453-6803533 2.94e-05 [+5(3.43e-05)]_8_[+2(4.98e-05)]_29_\ [+5(3.43e-05)]_19 chrI:3507583-3507663 2.74e-02 80 chrIV:16133935-16134015 3.69e-04 8_[+1(1.10e-05)]_30_[+1(1.10e-05)]_\ 26 chrV:1053544-1053624 1.01e-07 46_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_7 chrI:3691965-3692045 9.22e-03 80 chrV:13598529-13598609 6.58e-04 29_[+1(1.10e-05)]_43 chrIII:10994244-10994324 8.23e-01 80 chrI:8420739-8420819 1.86e-07 37_[+2(3.10e-05)]_3_[+3(6.32e-05)]_\ 3_[+5(3.43e-05)]_13 chrV:7408679-7408759 2.20e-02 80 chrIII:8851216-8851296 7.79e-08 1_[+2(3.10e-05)]_25_[+3(6.32e-05)]_\ [+4(5.81e-05)]_3_[+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)] chrIV:15063948-15064028 1.24e-03 48_[+1(1.10e-05)]_24 chrIII:5750662-5750742 1.96e-02 35_[+5(3.43e-05)]_37 chrX:15814707-15814787 1.20e-01 80 chrV:222167-222247 1.01e-07 27_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_7 chrX:16618886-16618966 7.79e-08 22_[+1(1.10e-05)]_11_[+4(5.81e-05)]_\ 6_[+3(6.32e-05)]_17 chrI:1287938-1288018 2.72e-04 25_[+2(7.54e-05)]_20_[+1(1.10e-05)]_\ 19 chrIII:6975111-6975191 2.33e-08 5_[+3(6.32e-05)]_[+4(5.81e-05)]_8_\ [+5(3.43e-05)]_8_[+2(4.98e-05)]_27 chrIII:3738490-3738570 5.07e-07 21_[+5(3.43e-05)]_8_[+2(4.98e-05)]_\ 35 chrIV:13441874-13441954 5.07e-07 12_[+5(3.43e-05)]_8_[+2(4.98e-05)]_\ 29_[+5(3.43e-05)]_7 chrIII:3094853-3094933 5.21e-04 21_[+1(1.10e-05)]_20_[+1(1.10e-05)]_\ 23 chrIII:6837479-6837559 1.22e-03 42_[+2(4.98e-05)]_30 chrIII:3351250-3351330 8.23e-05 61_[+1(1.10e-05)]_11 chrIII:5344720-5344800 4.06e-03 80 chrIII:6331370-6331450 8.88e-02 80 chrI:464786-464866 4.04e-04 25_[+1(1.10e-05)]_14_[+2(8.66e-05)]_\ 25 chrIII:5627691-5627771 1.74e-08 7_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ 18_[+5(3.43e-05)]_28 chrX:9719574-9719654 9.56e-01 80 chrV:4132425-4132505 4.42e-01 80 chrII:12446417-12446497 7.25e-05 41_[+1(1.10e-05)]_31 chrV:10366398-10366478 2.74e-03 56_[+2(3.10e-05)]_16 chrIV:7922455-7922535 2.94e-05 9_[+2(4.98e-05)]_29_[+5(3.43e-05)]_\ 26 chrX:14011422-14011502 1.19e-01 80 chrIV:669699-669779 4.63e-05 36_[+1(1.10e-05)]_36 chrIII:9598942-9599022 4.63e-02 80 chrIV:2257538-2257618 9.26e-04 8_[+1(1.10e-05)]_11_[+1(1.10e-05)]_\ 45 chrI:5948493-5948573 4.10e-04 65_[+3(6.32e-05)]_7 chrV:10402618-10402698 1.10e-01 80 chrX:3282160-3282240 2.64e-02 80 chrIII:12777809-12777889 8.41e-01 80 chrX:13045369-13045449 7.74e-04 41_[+1(1.10e-05)]_31 chrII:238033-238113 1.74e-08 10_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ 17_[+5(3.43e-05)]_8_[+2(4.98e-05)]_10 chrX:8878888-8878968 6.10e-04 62_[+2(7.54e-05)]_10 chrII:2031518-2031598 5.87e-04 24_[+1(1.10e-05)]_48 chrIV:17049446-17049526 4.32e-04 25_[+1(1.10e-05)]_47 chrIV:13942199-13942279 2.33e-08 2_[+3(6.32e-05)]_[+4(5.81e-05)]_9_\ [+5(3.43e-05)]_8_[+2(4.98e-05)]_29 chrIV:9257024-9257104 1.12e-04 21_[+1(1.10e-05)]_18_[+1(1.10e-05)]_\ 25 chrIII:4293334-4293414 2.29e-02 80 chrIV:58553-58633 1.39e-09 6_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_10_[+5(3.43e-05)]_10 chrI:2601770-2601850 6.07e-04 18_[+1(1.10e-05)]_21_[+1(1.10e-05)]_\ 25 chrV:19185174-19185254 9.17e-04 31_[+1(1.10e-05)]_41 chrV:8711069-8711149 1.30e-02 80 chrV:15539405-15539485 7.79e-08 8_[+2(3.10e-05)]_25_[+3(6.32e-05)]_\ [+4(5.81e-05)]_3_[+1(1.10e-05)]_3_[+3(6.32e-05)]_1 chrI:8213317-8213397 3.73e-02 80 chrII:4040557-4040637 6.55e-05 24_[+1(1.10e-05)]_15_[+1(1.10e-05)]_\ 25 chrV:4368460-4368540 1.03e-01 80 chrI:3995029-3995109 1.79e-02 80 chrIII:4100596-4100676 3.48e-02 80 chrIII:5289873-5289953 6.71e-03 46_[+2(4.98e-05)]_26 chrV:2893987-2894067 4.29e-06 15_[+1(1.10e-05)]_39_[+1(1.10e-05)]_\ 10 chrV:2577350-2577430 9.34e-03 80 chrX:7746708-7746788 1.38e-02 80 chrIV:12314045-12314125 1.17e-06 24_[+3(6.32e-05)]_11_[+1(1.10e-05)]_\ 3_[+3(6.32e-05)]_18 chrIV:145748-145828 6.59e-03 80 chrX:15160367-15160447 1.39e-09 4_[+1(1.10e-05)]_3_[+3(6.32e-05)]_\ [+4(5.81e-05)]_9_[+5(3.43e-05)]_8_[+2(4.98e-05)]_16 chrIII:734452-734532 3.93e-04 11_[+1(1.10e-05)]_61 chrIII:5407579-5407659 8.53e-04 16_[+1(1.10e-05)]_25_[+1(1.10e-05)]_\ 23 chrV:6934462-6934542 1.80e-04 22_[+1(1.10e-05)]_50 chrIV:12068334-12068414 2.43e-01 80 chrIII:5654708-5654788 6.03e-02 80 chrIII:3239988-3240068 1.24e-03 17_[+1(1.10e-05)]_55 chrIII:7799197-7799277 2.33e-01 80 chrII:15102947-15103027 2.17e-02 80 chrI:6275427-6275507 9.85e-05 51_[+1(1.10e-05)]_21 chrII:2995559-2995639 1.01e-04 8_[+1(1.10e-05)]_64 chrI:310050-310130 9.24e-02 80 chrIII:3482837-3482917 8.06e-03 80 chrII:1330358-1330438 1.52e-04 32_[+1(1.10e-05)]_40 chrIV:5161564-5161644 1.28e-03 36_[+3(6.32e-05)]_36 chrII:624463-624543 4.13e-05 29_[+1(1.10e-05)]_43 chrV:11245540-11245620 9.40e-01 80 chrV:19781899-19781979 8.09e-05 55_[+1(1.10e-05)]_17 chrV:14175439-14175519 1.55e-02 80 chrX:8256375-8256455 8.02e-03 80 chrI:3835035-3835115 1.06e-01 80 chrII:10326873-10326953 1.15e-02 80 chrII:282565-282645 7.48e-01 80 chrV:15770797-15770877 2.85e-02 80 chrIV:14926562-14926642 2.70e-02 80 chrI:7749081-7749161 8.14e-02 80 chrIV:9361582-9361662 2.25e-03 43_[+4(5.81e-05)]_29 chrV:7261576-7261656 3.00e-02 80 chrI:3088177-3088257 9.25e-08 17_[+1(1.10e-05)]_11_[+4(5.81e-05)]_\ 18_[+5(3.43e-05)]_10 chrIV:14137592-14137672 1.39e-09 [+1(1.10e-05)]_3_[+3(6.32e-05)]_\ [+4(5.81e-05)]_9_[+5(3.43e-05)]_8_[+2(4.98e-05)]_20 chrIV:12870503-12870583 1.01e-03 22_[+1(1.10e-05)]_4_[+2(7.54e-05)]_\ 38 chrIV:12101475-12101555 6.69e-02 80 chrI:6273296-6273376 4.10e-06 17_[+1(1.10e-05)]_9_[+4(9.20e-05)]_\ 38 chrI:13265919-13265999 1.31e-05 14_[+1(1.10e-05)]_58 chrI:15006433-15006513 4.82e-02 80 chrI:5371214-5371294 6.32e-02 80 chrX:7310855-7310935 5.35e-04 21_[+2(8.66e-05)]_8_[+1(1.10e-05)]_\ 35 chrV:9556503-9556583 1.94e-01 80 chrIV:675602-675682 2.38e-02 80 chrIII:5767927-5768007 2.50e-02 80 chrV:1220862-1220942 1.03e-01 80 chrIV:16788688-16788768 1.39e-09 [+4(5.81e-05)]_6_[+3(6.32e-05)]_11_\ [+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_10_[+5(3.43e-05)]_2 chrX:2951447-2951527 1.01e-07 20_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_14 chrIII:2202732-2202812 3.85e-05 21_[+1(1.10e-05)]_51 chrX:8656632-8656712 7.34e-03 51_[+2(3.10e-05)]_21 chrI:469537-469617 2.61e-05 24_[+1(1.10e-05)]_48 chrIV:15979797-15979877 6.86e-02 32_[+5(3.43e-05)]_40 chrIV:5433338-5433418 3.84e-02 80 chrII:10776791-10776871 2.94e-05 6_[+2(4.98e-05)]_29_[+5(3.43e-05)]_\ 29 chrI:3337162-3337242 4.74e-02 80 chrIV:7024981-7025061 2.63e-03 80 chrI:11066860-11066940 7.07e-01 80 chrI:4611768-4611848 8.88e-02 80 chrIII:8382389-8382469 1.13e-06 46_[+1(1.10e-05)]_26 chrX:445548-445628 1.88e-01 80 chrX:9043308-9043388 1.05e-02 80 chrX:12512162-12512242 6.46e-04 80 chrX:6587017-6587097 1.10e-01 80 chrIV:14997169-14997249 1.39e-09 15_[+3(6.32e-05)]_[+4(5.81e-05)]_3_\ [+1(1.10e-05)]_3_[+3(6.32e-05)]_[+4(5.81e-05)]_10_[+5(3.43e-05)]_1 chrX:1390552-1390632 1.29e-01 80 chrIV:13752836-13752916 4.51e-04 50_[+1(1.10e-05)]_22 chrV:11685966-11686046 2.19e-01 80 chrIV:15565033-15565113 1.79e-05 39_[+1(1.10e-05)]_33 chrX:7097389-7097469 1.32e-02 80 chrIV:7312249-7312329 9.82e-05 28_[+1(1.10e-05)]_44 chrIV:4506383-4506463 2.30e-02 34_[+5(3.43e-05)]_38 chrIII:7703642-7703722 8.30e-02 80 chrIV:17238082-17238162 8.14e-07 32_[+2(3.10e-05)]_11_[+4(5.81e-05)]_\ 6_[+3(6.32e-05)]_7 chrV:20371536-20371616 4.80e-02 80 chrIV:1670288-1670368 3.97e-04 48_[+1(1.10e-05)]_24 chrV:13354292-13354372 9.72e-02 80 chrI:342233-342313 3.33e-02 80 chrI:5624331-5624411 1.64e-03 30_[+2(4.98e-05)]_42 chrIII:9713404-9713484 1.60e-05 6_[+1(1.10e-05)]_66 chrV:20471959-20472039 7.88e-04 11_[+1(1.10e-05)]_40_[+1(1.10e-05)]_\ 13 chrI:279645-279725 4.23e-04 39_[+2(3.10e-05)]_33 chrI:8313748-8313828 9.33e-03 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************