******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/sdz-38.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:15394727-15394807 1.0000 80 chrM:8783-8863 1.0000 80 chrX:17214263-17214343 1.0000 80 chrX:15389941-15390021 1.0000 80 chrM:1812-1892 1.0000 80 chrX:15392845-15392925 1.0000 80 chrX:17701102-17701182 1.0000 80 chrX:15395698-15395778 1.0000 80 chrM:10066-10146 1.0000 80 chrX:15391828-15391908 1.0000 80 chrM:1552-1632 1.0000 80 chrM:8530-8610 1.0000 80 chrM:3327-3407 1.0000 80 chrM:2980-3060 1.0000 80 chrX:16840139-16840219 1.0000 80 chrM:3586-3666 1.0000 80 chrM:8215-8295 1.0000 80 chrV:16595211-16595291 1.0000 80 chrX:15611000-15611080 1.0000 80 chrM:11135-11215 1.0000 80 chrM:7220-7300 1.0000 80 chrM:10879-10959 1.0000 80 chrM:6023-6103 1.0000 80 chrM:8984-9064 1.0000 80 chrI:13953244-13953324 1.0000 80 chrM:2117-2197 1.0000 80 chrV:18720189-18720269 1.0000 80 chrM:4673-4753 1.0000 80 chrM:4875-4955 1.0000 80 chrX:17419734-17419814 1.0000 80 chrII:9993476-9993556 1.0000 80 chrIII:12906813-12906893 1.0000 80 chrX:17273610-17273690 1.0000 80 chrI:7579060-7579140 1.0000 80 chrM:12415-12495 1.0000 80 chrV:18719392-18719472 1.0000 80 chrX:16184873-16184953 1.0000 80 chrM:1193-1273 1.0000 80 chrM:6225-6305 1.0000 80 chrM:2317-2397 1.0000 80 chrX:12348015-12348095 1.0000 80 chrX:9024387-9024467 1.0000 80 chrX:9238790-9238870 1.0000 80 chrII:8441666-8441746 1.0000 80 chrIII:5874390-5874470 1.0000 80 chrX:17640776-17640856 1.0000 80 chrX:16928151-16928231 1.0000 80 chrV:10526081-10526161 1.0000 80 chrIV:867035-867115 1.0000 80 chrX:12171894-12171974 1.0000 80 chrIV:2805669-2805749 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_sdz-38/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/sdz-38.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 51 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 4080 N= 51 sample: seed= 0 hsfrac= 0 searchsize= 4080 norand= no csites= 1000 Letter frequencies in dataset: A 0.291 C 0.176 G 0.207 T 0.326 Background letter frequencies (from file dataset with add-one prior applied): A 0.291 C 0.177 G 0.207 T 0.326 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCGGMCSG MEME-1 width = 8 sites = 3 llr = 36 E-value = 5.9e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::3::: pos.-specific C aa::7a3: probability G ::aa::7a matrix T :::::::: bits 2.5 ** * 2.3 **** * * 2.0 **** * * 1.8 **** * * Relative 1.5 **** *** Entropy 1.3 ******** (17.1 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CCGGCCGG consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:2805669-2805749 18 1.80e-06 ggttcaattc ccggccgG GGAGAATCGG chrX:17701102-17701182 39 3.34e-06 ATAGCCGCAT CCGGCCCG CCGTTTGACC chrIII:12906813-12906893 32 6.31e-06 ATTGACGCAG CCGGACGG ACCATCGATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:2805669-2805749 1.8e-06 17_[+1]_55 chrX:17701102-17701182 3.3e-06 38_[+1]_34 chrIII:12906813-12906893 6.3e-06 31_[+1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCGGMCSG width=8 seqs=3 chrIV:2805669-2805749 ( 18) CCGGCCGG 1 chrX:17701102-17701182 ( 39) CCGGCCCG 1 chrIII:12906813-12906893 ( 32) CCGGACGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 3723 bayes= 9.93478 E= 5.9e+002 -823 250 -823 -823 -823 250 -823 -823 -823 -823 227 -823 -823 -823 227 -823 20 191 -823 -823 -823 250 -823 -823 -823 91 169 -823 -823 -823 227 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 5.9e+002 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGMCSG MEME-1 regular expression -------------------------------------------------------------------------------- CCGG[CA]C[GC]G -------------------------------------------------------------------------------- Time 0.80 secs. ******************************************************************************** ******************************************************************************** MOTIF MGTCACWC MEME-2 width = 8 sites = 9 llr = 82 E-value = 2.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 31::a:7: pos.-specific C 7:2a:9:a probability G :8:::1:: matrix T :18:::3: bits 2.5 * * 2.3 * * 2.0 * * * 1.8 *** * Relative 1.5 *** * Entropy 1.3 ** *** * (13.1 bits) 1.0 ****** * 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CGTCACAC consensus A C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:17640776-17640856 34 5.61e-06 ACCAGACTTT CGTCACAC AATCAGACAG chrX:17419734-17419814 21 8.65e-06 CATACCACAC CGCCACAC CTTGTTTCCC chrX:17214263-17214343 66 2.42e-05 CACCTGGTTC AGTCACAC AGTACGA chrI:13953244-13953324 49 2.76e-05 AGTCCTGGCA CGCCACTC AGGGTACTTG chrM:7220-7300 38 4.29e-05 CTTATTCTTC AGTCACTC ATATAAGGTT chrX:15391828-15391908 60 4.29e-05 ATAGACGAAT AGTCACTC Taaaaaaaaa chrII:9993476-9993556 8 5.08e-05 AAAGTCA CATCACAC TTTATGTGTA chrV:18719392-18719472 15 5.74e-05 tttctgagaa cgtcagac agttccaaaa chrX:16184873-16184953 30 6.62e-05 TTCAATGCCT CTTCACAC GTAACTAGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:17640776-17640856 5.6e-06 33_[+2]_39 chrX:17419734-17419814 8.7e-06 20_[+2]_52 chrX:17214263-17214343 2.4e-05 65_[+2]_7 chrI:13953244-13953324 2.8e-05 48_[+2]_24 chrM:7220-7300 4.3e-05 37_[+2]_35 chrX:15391828-15391908 4.3e-05 59_[+2]_13 chrII:9993476-9993556 5.1e-05 7_[+2]_65 chrV:18719392-18719472 5.7e-05 14_[+2]_58 chrX:16184873-16184953 6.6e-05 29_[+2]_43 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MGTCACWC width=8 seqs=9 chrX:17640776-17640856 ( 34) CGTCACAC 1 chrX:17419734-17419814 ( 21) CGCCACAC 1 chrX:17214263-17214343 ( 66) AGTCACAC 1 chrI:13953244-13953324 ( 49) CGCCACTC 1 chrM:7220-7300 ( 38) AGTCACTC 1 chrX:15391828-15391908 ( 60) AGTCACTC 1 chrII:9993476-9993556 ( 8) CATCACAC 1 chrV:18719392-18719472 ( 15) CGTCAGAC 1 chrX:16184873-16184953 ( 30) CTTCACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 3723 bayes= 9.53838 E= 2.2e+002 20 192 -982 -982 -138 -982 191 -155 -982 33 -982 125 -982 250 -982 -982 178 -982 -982 -982 -982 233 -89 -982 120 -982 -982 3 -982 250 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 2.2e+002 0.333333 0.666667 0.000000 0.000000 0.111111 0.000000 0.777778 0.111111 0.000000 0.222222 0.000000 0.777778 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.666667 0.000000 0.000000 0.333333 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MGTCACWC MEME-2 regular expression -------------------------------------------------------------------------------- [CA]G[TC]CAC[AT]C -------------------------------------------------------------------------------- Time 1.36 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCACGCA MEME-3 width = 8 sites = 2 llr = 25 E-value = 4.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::a:::a pos.-specific C aaa:a:a: probability G :::::a:: matrix T :::::::: bits 2.5 *** * * 2.3 *** *** 2.0 *** *** 1.8 ******** Relative 1.5 ******** Entropy 1.3 ******** (18.3 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CCCACGCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:9024387-9024467 30 3.05e-06 ACAAATTGCC CCCACGCA GGATTGAACT chrX:12348015-12348095 12 3.05e-06 GGGATTCGAA CCCACGCA CCCATACGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:9024387-9024467 3e-06 29_[+3]_43 chrX:12348015-12348095 3e-06 11_[+3]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCACGCA width=8 seqs=2 chrX:9024387-9024467 ( 30) CCCACGCA 1 chrX:12348015-12348095 ( 12) CCCACGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 3723 bayes= 10.8615 E= 4.2e+002 -765 250 -765 -765 -765 250 -765 -765 -765 250 -765 -765 178 -765 -765 -765 -765 250 -765 -765 -765 -765 227 -765 -765 250 -765 -765 178 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 4.2e+002 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCACGCA MEME-3 regular expression -------------------------------------------------------------------------------- CCCACGCA -------------------------------------------------------------------------------- Time 1.94 secs. ******************************************************************************** ******************************************************************************** MOTIF CCACAGGC MEME-4 width = 8 sites = 2 llr = 25 E-value = 7.8e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::a:a::: pos.-specific C aa:a:::a probability G :::::aa: matrix T :::::::: bits 2.5 ** * * 2.3 ** * *** 2.0 ** * *** 1.8 ******** Relative 1.5 ******** Entropy 1.3 ******** (18.1 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CCACAGGC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:12171894-12171974 52 3.56e-06 ACTGCCGCTT CCACAGGC ACAGCGGACC chrV:10526081-10526161 73 3.56e-06 ACTCTACATC CCACAGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:12171894-12171974 3.6e-06 51_[+4]_21 chrV:10526081-10526161 3.6e-06 72_[+4] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCACAGGC width=8 seqs=2 chrX:12171894-12171974 ( 52) CCACAGGC 1 chrV:10526081-10526161 ( 73) CCACAGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 3723 bayes= 10.8615 E= 7.8e+002 -765 250 -765 -765 -765 250 -765 -765 178 -765 -765 -765 -765 250 -765 -765 178 -765 -765 -765 -765 -765 227 -765 -765 -765 227 -765 -765 250 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 7.8e+002 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACAGGC MEME-4 regular expression -------------------------------------------------------------------------------- CCACAGGC -------------------------------------------------------------------------------- Time 2.47 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGCRCCM MEME-5 width = 8 sites = 3 llr = 35 E-value = 1.7e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::3::7 pos.-specific C :::a:aa3 probability G aaa:7::: matrix T :::::::: bits 2.5 * ** 2.3 **** ** 2.0 **** ** 1.8 **** ** Relative 1.5 **** ** Entropy 1.3 ******* (16.6 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel GGGCGCCA consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrM:2317-2397 11 2.96e-06 GAACTTAACC GGGCGCCA TTTGATTTTT chrX:17701102-17701182 20 2.96e-06 AAGTTTAGTT GGGCGCCA GATAGCCGCA chrM:8215-8295 59 1.15e-05 AAGAACAATG GGGCACCC TGGAAGTAGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrM:2317-2397 3e-06 10_[+5]_62 chrX:17701102-17701182 3e-06 19_[+5]_53 chrM:8215-8295 1.1e-05 58_[+5]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGCRCCM width=8 seqs=3 chrM:2317-2397 ( 11) GGGCGCCA 1 chrX:17701102-17701182 ( 20) GGGCGCCA 1 chrM:8215-8295 ( 59) GGGCACCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 3723 bayes= 10.7239 E= 1.7e+003 -823 -823 227 -823 -823 -823 227 -823 -823 -823 227 -823 -823 250 -823 -823 20 -823 169 -823 -823 250 -823 -823 -823 250 -823 -823 119 91 -823 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 1.7e+003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.666667 0.333333 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGCRCCM MEME-5 regular expression -------------------------------------------------------------------------------- GGGC[GA]CC[AC] -------------------------------------------------------------------------------- Time 3.01 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:15394727-15394807 9.77e-01 80 chrM:8783-8863 6.24e-01 80 chrX:17214263-17214343 3.88e-02 65_[+2(2.42e-05)]_7 chrX:15389941-15390021 6.61e-01 80 chrM:1812-1892 1.61e-01 80 chrX:15392845-15392925 2.00e-01 80 chrX:17701102-17701182 7.94e-06 19_[+5(2.96e-06)]_11_[+1(3.34e-06)]_\ 34 chrX:15395698-15395778 8.73e-01 80 chrM:10066-10146 1.00e+00 80 chrX:15391828-15391908 1.65e-01 59_[+2(4.29e-05)]_13 chrM:1552-1632 9.23e-01 80 chrM:8530-8610 9.53e-01 80 chrM:3327-3407 9.43e-01 80 chrM:2980-3060 4.98e-01 80 chrX:16840139-16840219 8.44e-01 80 chrM:3586-3666 1.00e+00 80 chrM:8215-8295 2.93e-02 58_[+5(1.15e-05)]_14 chrV:16595211-16595291 2.47e-01 80 chrX:15611000-15611080 9.11e-01 80 chrM:11135-11215 9.96e-01 80 chrM:7220-7300 6.01e-02 37_[+2(4.29e-05)]_35 chrM:10879-10959 9.95e-01 80 chrM:6023-6103 9.97e-01 80 chrM:8984-9064 9.36e-01 80 chrI:13953244-13953324 9.28e-04 48_[+2(2.76e-05)]_24 chrM:2117-2197 6.35e-01 80 chrV:18720189-18720269 6.36e-01 80 chrM:4673-4753 9.97e-01 80 chrM:4875-4955 9.45e-01 80 chrX:17419734-17419814 5.10e-03 20_[+2(8.65e-06)]_52 chrII:9993476-9993556 1.55e-02 7_[+2(5.08e-05)]_65 chrIII:12906813-12906893 1.32e-02 31_[+1(6.31e-06)]_41 chrX:17273610-17273690 3.10e-01 80 chrI:7579060-7579140 6.01e-01 80 chrM:12415-12495 9.64e-01 80 chrV:18719392-18719472 1.05e-01 14_[+2(5.74e-05)]_58 chrX:16184873-16184953 1.85e-02 29_[+2(6.62e-05)]_43 chrM:1193-1273 9.95e-01 80 chrM:6225-6305 9.69e-01 80 chrM:2317-2397 3.85e-03 10_[+5(2.96e-06)]_62 chrX:12348015-12348095 4.15e-03 11_[+3(3.05e-06)]_61 chrX:9024387-9024467 4.68e-04 29_[+3(3.05e-06)]_43 chrX:9238790-9238870 1.00e+00 80 chrII:8441666-8441746 3.25e-01 80 chrIII:5874390-5874470 9.34e-01 80 chrX:17640776-17640856 1.44e-02 33_[+2(5.61e-06)]_39 chrX:16928151-16928231 9.88e-01 80 chrV:10526081-10526161 5.93e-04 72_[+4(3.56e-06)] chrIV:867035-867115 6.05e-02 80 chrX:12171894-12171974 8.60e-05 51_[+4(3.56e-06)]_21 chrIV:2805669-2805749 1.58e-02 17_[+1(1.80e-06)]_55 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n11.farnam.hpc.yale.internal ********************************************************************************