******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/lin-32.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIV:6998077-6998157 1.0000 80 chrX:9697814-9697894 1.0000 80 chrII:5220046-5220126 1.0000 80 chrI:2845633-2845713 1.0000 80 chrV:13021695-13021775 1.0000 80 chrIV:12821481-12821561 1.0000 80 chrI:9909024-9909104 1.0000 80 chrII:4987416-4987496 1.0000 80 chrIV:13190222-13190302 1.0000 80 chrV:13120235-13120315 1.0000 80 chrI:14788750-14788830 1.0000 80 chrV:14438499-14438579 1.0000 80 chrIII:1163025-1163105 1.0000 80 chrI:6285407-6285487 1.0000 80 chrV:13169303-13169383 1.0000 80 chrI:5411437-5411517 1.0000 80 chrX:7469543-7469623 1.0000 80 chrII:9965904-9965984 1.0000 80 chrIII:4092194-4092274 1.0000 80 chrII:4981867-4981947 1.0000 80 chrI:8281223-8281303 1.0000 80 chrIV:12552107-12552187 1.0000 80 chrX:2229466-2229546 1.0000 80 chrIV:17206683-17206763 1.0000 80 chrIV:13001394-13001474 1.0000 80 chrX:7162933-7163013 1.0000 80 chrI:14067500-14067580 1.0000 80 chrII:12991346-12991426 1.0000 80 chrII:1217290-1217370 1.0000 80 chrI:9374087-9374167 1.0000 80 chrIII:869061-869141 1.0000 80 chrV:11953013-11953093 1.0000 80 chrII:1061832-1061912 1.0000 80 chrX:11673505-11673585 1.0000 80 chrI:9904110-9904190 1.0000 80 chrV:1572763-1572843 1.0000 80 chrV:8356441-8356521 1.0000 80 chrIII:5120780-5120860 1.0000 80 chrII:12984838-12984918 1.0000 80 chrIII:12611590-12611670 1.0000 80 chrV:4506847-4506927 1.0000 80 chrX:10424877-10424957 1.0000 80 chrI:6724847-6724927 1.0000 80 chrX:7209319-7209399 1.0000 80 chrI:9910678-9910758 1.0000 80 chrX:1801151-1801231 1.0000 80 chrX:2231279-2231359 1.0000 80 chrIV:4448469-4448549 1.0000 80 chrX:2328160-2328240 1.0000 80 chrIV:14299099-14299179 1.0000 80 chrX:1069123-1069203 1.0000 80 chrIII:5183521-5183601 1.0000 80 chrII:4583353-4583433 1.0000 80 chrX:6259217-6259297 1.0000 80 chrII:2092122-2092202 1.0000 80 chrII:11568830-11568910 1.0000 80 chrII:3975063-3975143 1.0000 80 chrX:3320216-3320296 1.0000 80 chrIII:5720974-5721054 1.0000 80 chrX:17409375-17409455 1.0000 80 chrIII:6605608-6605688 1.0000 80 chrIV:8055375-8055455 1.0000 80 chrII:11887912-11887992 1.0000 80 chrIII:4461467-4461547 1.0000 80 chrII:6936081-6936161 1.0000 80 chrI:6458769-6458849 1.0000 80 chrIII:3821267-3821347 1.0000 80 chrX:17150238-17150318 1.0000 80 chrV:11947569-11947649 1.0000 80 chrII:4585445-4585525 1.0000 80 chrV:3256974-3257054 1.0000 80 chrX:2473695-2473775 1.0000 80 chrII:10986852-10986932 1.0000 80 chrI:10479134-10479214 1.0000 80 chrII:9572064-9572144 1.0000 80 chrIV:17215247-17215327 1.0000 80 chrII:9059166-9059246 1.0000 80 chrIV:8068424-8068504 1.0000 80 chrI:4786144-4786224 1.0000 80 chrI:2710910-2710990 1.0000 80 chrII:11890725-11890805 1.0000 80 chrIV:16380407-16380487 1.0000 80 chrII:1025889-1025969 1.0000 80 chrIV:12540990-12541070 1.0000 80 chrII:7815619-7815699 1.0000 80 chrX:2049037-2049117 1.0000 80 chrIV:565000-565080 1.0000 80 chrV:6684711-6684791 1.0000 80 chrIV:130298-130378 1.0000 80 chrI:11589073-11589153 1.0000 80 chrI:13501053-13501133 1.0000 80 chrII:8410426-8410506 1.0000 80 chrI:13629000-13629080 1.0000 80 chrII:4974610-4974690 1.0000 80 chrX:9702931-9703011 1.0000 80 chrIII:3086631-3086711 1.0000 80 chrIV:9852993-9853073 1.0000 80 chrX:4513696-4513776 1.0000 80 chrI:2890393-2890473 1.0000 80 chrIII:8872165-8872245 1.0000 80 chrIV:1895150-1895230 1.0000 80 chrX:5243750-5243830 1.0000 80 chrIV:11867828-11867908 1.0000 80 chrIII:8506420-8506500 1.0000 80 chrX:9437042-9437122 1.0000 80 chrII:8858039-8858119 1.0000 80 chrI:1693100-1693180 1.0000 80 chrX:2217680-2217760 1.0000 80 chrX:13146145-13146225 1.0000 80 chrI:274508-274588 1.0000 80 chrIV:5929111-5929191 1.0000 80 chrIV:178738-178818 1.0000 80 chrII:2681827-2681907 1.0000 80 chrX:10927287-10927367 1.0000 80 chrII:629927-630007 1.0000 80 chrIV:11311649-11311729 1.0000 80 chrII:5988318-5988398 1.0000 80 chrX:4972176-4972256 1.0000 80 chrI:9570551-9570631 1.0000 80 chrI:2844330-2844410 1.0000 80 chrV:3209320-3209400 1.0000 80 chrV:6685670-6685750 1.0000 80 chrV:9767805-9767885 1.0000 80 chrIII:7657067-7657147 1.0000 80 chrV:6681668-6681748 1.0000 80 chrX:7560296-7560376 1.0000 80 chrX:7223127-7223207 1.0000 80 chrIV:3849047-3849127 1.0000 80 chrII:10554185-10554265 1.0000 80 chrI:6154958-6155038 1.0000 80 chrX:10556893-10556973 1.0000 80 chrII:7809652-7809732 1.0000 80 chrII:873138-873218 1.0000 80 chrX:9435464-9435544 1.0000 80 chrX:16988538-16988618 1.0000 80 chrV:14428443-14428523 1.0000 80 chrV:12207759-12207839 1.0000 80 chrV:6470259-6470339 1.0000 80 chrIII:12894378-12894458 1.0000 80 chrIV:16410225-16410305 1.0000 80 chrX:13881888-13881968 1.0000 80 chrIII:6929197-6929277 1.0000 80 chrIV:12685953-12686033 1.0000 80 chrI:9524339-9524419 1.0000 80 chrI:3603317-3603397 1.0000 80 chrII:2137365-2137445 1.0000 80 chrIII:12233581-12233661 1.0000 80 chrI:124823-124903 1.0000 80 chrI:3338412-3338492 1.0000 80 chrIV:1361930-1362010 1.0000 80 chrIV:177643-177723 1.0000 80 chrX:12183315-12183395 1.0000 80 chrX:14486618-14486698 1.0000 80 chrV:2623836-2623916 1.0000 80 chrV:5707136-5707216 1.0000 80 chrX:13221515-13221595 1.0000 80 chrII:13845316-13845396 1.0000 80 chrII:10784961-10785041 1.0000 80 chrII:3310124-3310204 1.0000 80 chrX:4609788-4609868 1.0000 80 chrIV:1904210-1904290 1.0000 80 chrI:13528223-13528303 1.0000 80 chrI:11208173-11208253 1.0000 80 chrX:4125325-4125405 1.0000 80 chrII:4640941-4641021 1.0000 80 chrX:12854320-12854400 1.0000 80 chrX:12689612-12689692 1.0000 80 chrX:12092736-12092816 1.0000 80 chrIV:9264019-9264099 1.0000 80 chrX:4618062-4618142 1.0000 80 chrI:9903271-9903351 1.0000 80 chrI:12921053-12921133 1.0000 80 chrIV:5860975-5861055 1.0000 80 chrV:4969024-4969104 1.0000 80 chrV:6683477-6683557 1.0000 80 chrX:2238336-2238416 1.0000 80 chrII:622685-622765 1.0000 80 chrX:7967994-7968074 1.0000 80 chrII:11077148-11077228 1.0000 80 chrX:6258554-6258634 1.0000 80 chrX:11765997-11766077 1.0000 80 chrIII:11141771-11141851 1.0000 80 chrX:9067386-9067466 1.0000 80 chrX:12188799-12188879 1.0000 80 chrI:4703334-4703414 1.0000 80 chrI:13409902-13409982 1.0000 80 chrIV:12549235-12549315 1.0000 80 chrV:12206132-12206212 1.0000 80 chrI:9374771-9374851 1.0000 80 chrX:11210603-11210683 1.0000 80 chrV:10038830-10038910 1.0000 80 chrI:1315573-1315653 1.0000 80 chrIV:9770839-9770919 1.0000 80 chrIV:563166-563246 1.0000 80 chrV:13018330-13018410 1.0000 80 chrI:3959623-3959703 1.0000 80 chrII:10652213-10652293 1.0000 80 chrIV:10421461-10421541 1.0000 80 chrII:4577557-4577637 1.0000 80 chrI:762891-762971 1.0000 80 chrII:3957476-3957556 1.0000 80 chrV:3448067-3448147 1.0000 80 chrII:5933247-5933327 1.0000 80 chrII:937431-937511 1.0000 80 chrX:12172636-12172716 1.0000 80 chrII:14248411-14248491 1.0000 80 chrV:3612575-3612655 1.0000 80 chrIII:9768047-9768127 1.0000 80 chrX:11211528-11211608 1.0000 80 chrI:14962370-14962450 1.0000 80 chrIV:1886626-1886706 1.0000 80 chrX:8390286-8390366 1.0000 80 chrX:6686818-6686898 1.0000 80 chrI:3101909-3101989 1.0000 80 chrV:3688878-3688958 1.0000 80 chrI:240360-240440 1.0000 80 chrV:18808743-18808823 1.0000 80 chrIII:5501510-5501590 1.0000 80 chrII:5418575-5418655 1.0000 80 chrII:7813488-7813568 1.0000 80 chrIV:5093559-5093639 1.0000 80 chrX:13519176-13519256 1.0000 80 chrIII:9230219-9230299 1.0000 80 chrV:1580598-1580678 1.0000 80 chrIII:12713939-12714019 1.0000 80 chrV:16838834-16838914 1.0000 80 chrIV:12158106-12158186 1.0000 80 chrI:11203269-11203349 1.0000 80 chrI:6153598-6153678 1.0000 80 chrII:11889525-11889605 1.0000 80 chrIII:9661253-9661333 1.0000 80 chrI:6280427-6280507 1.0000 80 chrX:2230024-2230104 1.0000 80 chrIV:7455039-7455119 1.0000 80 chrIII:5497843-5497923 1.0000 80 chrV:18710307-18710387 1.0000 80 chrIV:5964828-5964908 1.0000 80 chrI:9788063-9788143 1.0000 80 chrX:7965620-7965700 1.0000 80 chrV:9546268-9546348 1.0000 80 chrX:2218977-2219057 1.0000 80 chrIII:4455192-4455272 1.0000 80 chrII:11886003-11886083 1.0000 80 chrIII:4519609-4519689 1.0000 80 chrX:14504236-14504316 1.0000 80 chrIV:6988443-6988523 1.0000 80 chrIV:7078832-7078912 1.0000 80 chrI:4299576-4299656 1.0000 80 chrI:11664997-11665077 1.0000 80 chrV:19127249-19127329 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_lin-32/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/lin-32.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.263 C 0.245 G 0.229 T 0.263 Background letter frequencies (from file dataset with add-one prior applied): A 0.263 C 0.245 G 0.229 T 0.263 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF MCAKCTGK MEME-1 width = 8 sites = 214 llr = 1520 E-value = 1.7e-192 ******************************************************************************** -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 5:a:3::: pos.-specific C 3a:16::1 probability G 2::51:a3 matrix T :::3:a:5 bits 2.1 * * 1.9 ** ** 1.7 ** ** 1.5 ** ** Relative 1.3 ** ** Entropy 1.1 ** ** (10.2 bits) 0.9 ** ** 0.6 *** **** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACAGCTGT consensus C TA G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIII:9661253-9661333 14 1.51e-05 TTGATCTTCA ACAGCTGT GTCTCATCTG chrII:14248411-14248491 50 1.51e-05 CTATCGTACA ACAGCTGT TGTTGTTACT chrIII:11141771-11141851 47 1.51e-05 GGAGGGCCGA ACAGCTGT GTTTTCCGTG chrI:9570551-9570631 41 1.51e-05 CCAAACATAT ACAGCTGT TACTGTCTCC chrX:4972176-4972256 32 1.51e-05 CTTCTGTTTC ACAGCTGT CGTCTCCGCC chrI:274508-274588 48 1.51e-05 TAGGACCACC ACAGCTGT TCCTTCCTTT chrI:4786144-4786224 38 1.51e-05 AGGTAAAATA ACAGCTGT CGGGAAGAAA chrIV:8068424-8068504 32 1.51e-05 GAATGAAGAA ACAGCTGT TGCATTCGCT chrII:6936081-6936161 24 1.51e-05 TATTCTGATA ACAGCTGT GCTCACAGGT chrIV:4448469-4448549 60 1.51e-05 CTCGCGCGCA ACAGCTGT TGATGTGTGG chrI:6285407-6285487 61 1.51e-05 CCCTAGCATA ACAGCTGT TTCCGATTAG chrX:13519176-13519256 40 4.22e-05 TGGTTCTACA ACAGCTGG TGTCCCCCTG chrX:11211528-11211608 21 4.22e-05 AGGTCCGTAC CCAGCTGT CATCTCTTAA chrX:13221515-13221595 55 4.22e-05 TGTTATTCCT CCAGCTGT CATGCATAAT chrX:12183315-12183395 28 4.22e-05 AGAATAAAGG ACAGCTGG TCCACAGCTG chrI:3338412-3338492 42 4.22e-05 CGTTCCACCG CCAGCTGT TCCGCTGGCC chrI:124823-124903 45 4.22e-05 CTGCACACAG ACAGCTGG CACATGGATG chrIV:17215247-17215327 19 4.22e-05 CCCCCAATGG ACAGCTGG CTCACCAGCT chrX:7209319-7209399 4 4.22e-05 CGC ACAGCTGG GATCTACATC chrII:12991346-12991426 2 4.22e-05 A CCAGCTGT CATTTCGGGC chrIII:4092194-4092274 20 4.22e-05 CGCCGTTGCA CCAGCTGT AGTGCACCTG chrV:9546268-9546348 45 5.95e-05 GTGACCTCAG ACATCTGT CGCTCCGCCC chrI:11203269-11203349 3 5.95e-05 AG ACATCTGT CCTTCATCCA chrII:937431-937511 24 5.95e-05 GGTGCATGCG ACATCTGT CCTCTAGGAG chrIV:9770839-9770919 19 5.95e-05 TCCCTATCTA ACATCTGT TACAGTACTC chrX:12689612-12689692 60 5.95e-05 GTCAGAAGCA ACATCTGT CGACCGACTT chrI:11208173-11208253 48 5.95e-05 ATGTGGCGCA ACATCTGT CGGCCTTCTC chrI:13528223-13528303 11 5.95e-05 TGTGCATGTG ACATCTGT TTCCATGTAT chrII:629927-630007 25 5.95e-05 ATGCAAAAAA ACATCTGT TCACTTCTCA chrII:2681827-2681907 8 5.95e-05 GGATGGA ACATCTGT CTAATCTGAT chrX:4513696-4513776 49 5.95e-05 GCATTAGCCA ACATCTGT TGTCCGGCCG chrI:13629000-13629080 67 5.95e-05 GGGGCAATGC ACATCTGT GTCCGC chrI:13501053-13501133 48 5.95e-05 ACCATCTGGC ACATCTGT CCCCTCTCAC chrX:17150238-17150318 49 5.95e-05 CGAAGGTCCA ACATCTGT TGAGGCGAAA chrX:2229466-2229546 46 5.95e-05 TGGTTGGATA ACATCTGT TAGCATACAT chrV:13120235-13120315 71 5.95e-05 ATGGTGTGTG ACATCTGT CA chrIV:7078832-7078912 29 7.57e-05 ACAGATGTCA ACAGATGT TCCATCTTTC chrII:7813488-7813568 34 7.57e-05 CTATGTGTGC ACAGATGT GTCAAATACG chrV:3688878-3688958 3 7.57e-05 CG ACAGATGT GTGTGTTCGT chrX:12188799-12188879 62 7.57e-05 ATCAGCCGAA ACAGATGT GCGCATACAG chrX:12854320-12854400 25 7.57e-05 TGTGCACACA ACAGATGT CCAGTCGCGC chrIII:5720974-5721054 63 7.57e-05 ACATATGGAG ACAGATGT TTTCTGAAGC chrIII:5183521-5183601 30 7.57e-05 ATACGGGATG ACAGATGT TCCCGCCGTG chrX:7162933-7163013 30 7.57e-05 CCCTACAGCA ACAGATGT CGTTCAGTCC chrV:13169303-13169383 63 7.57e-05 AACATTGAAA ACAGATGT CGCCAGATAC chrIV:13190222-13190302 57 7.57e-05 ACCTGCTACA ACAGATGT CACACAGACA chrX:2231279-2231359 53 8.79e-05 ACATATGTTT CCAGCTGG CACAACAACA chrX:7469543-7469623 48 8.79e-05 ccagcagcag ccagcTGG GACGAGGACT chrIII:4519609-4519689 28 1.32e-04 GCCTTGTGTG CCATCTGT CCTCCATCAT chrI:6280427-6280507 52 1.32e-04 CCTCCCCCGA CCATCTGT CCATCTTATG chrIII:5501510-5501590 33 1.32e-04 ATCTGCCTAC CCATCTGT TGTATGCATA chrI:3101909-3101989 36 1.32e-04 GACAGCAGCA GCAGCTGT GAAGCAGTGA chrII:5933247-5933327 39 1.32e-04 CATTAGAAAA CCATCTGT CCGTTTGTGT chrI:1315573-1315653 5 1.32e-04 ATAG CCATCTGT GCCTCTCACA chrII:10784961-10785041 22 1.32e-04 CGGGAAATGG GCAGCTGT TGCACCTAGT chrX:14486618-14486698 25 1.32e-04 TCACCTCCTT CCATCTGT TCCGCTCTTA chrI:3603317-3603397 44 1.32e-04 TGTACTCATT GCAGCTGT GCAGTATTTC chrIV:12685953-12686033 12 1.32e-04 AAAACTGACA ACATCTGG TGCTCAGTCC chrII:7809652-7809732 32 1.32e-04 AACGTTTCGA ACATCTGG CTCTTTTCCT chrIV:5929111-5929191 38 1.32e-04 AAAAAAGAAC ACATCTGG TGTCCATCTG chrX:13146145-13146225 26 1.32e-04 GCTGGCACCA CCATCTGT CTGAGCCGCT chrII:8858039-8858119 46 1.32e-04 CGGACGAGCG CCATCTGT TCACAGTGAG chrX:5243750-5243830 39 1.32e-04 CAGTTACCAG CCATCTGT TGTCGCCAAA chrX:9702931-9703011 25 1.32e-04 CCAATTTCGG CCATCTGT CACTTGAGCG chrI:11589073-11589153 2 1.32e-04 A CCATCTGT CCCCTTCCCA chrIV:16380407-16380487 73 1.32e-04 GCCATATGTG GCAGCTGT chrI:2710910-2710990 9 1.32e-04 TGTTACTC GCAGCTGT GTGCTTTTCC chrIII:6605608-6605688 56 1.32e-04 AATAACCCTA CCATCTGT CCCTTATTGG chrX:2328160-2328240 17 1.32e-04 CACATATCTT CCATCTGT TGCAGATGAA chrX:10424877-10424957 49 1.32e-04 TGTATTCTCG CCATCTGT CGGTGTTGGC chrIII:12611590-12611670 39 1.32e-04 TGTAATAAGA ACATCTGG CAGTGTGGTA chrII:12984838-12984918 16 1.32e-04 AAAGGAAAAG CCATCTGT CAGCAGTTGG chrX:11673505-11673585 38 1.32e-04 TCCAGCAAGA CCATCTGT CATCATGCGA chrIII:869061-869141 44 1.32e-04 CGGTGAAGTG CCATCTGT TGGCTCCCCG chrIV:17206683-17206763 52 1.32e-04 TCCATTCTGA GCAGCTGT CACGTTGCAT chrI:5411437-5411517 58 1.32e-04 GGGTCGGGGA ACATCTGG ACAGCAGATG chrV:14438499-14438579 24 1.32e-04 ATATCTGGCA GCAGCTGT TGATGTAGTT chrI:9909024-9909104 28 1.32e-04 TCTGTAGAGA ACATCTGG CGACAGATGG chrV:13021695-13021775 63 1.32e-04 ATCCAAATGA CCATCTGT CATCAGACGA chrII:5220046-5220126 43 1.32e-04 GCATTTGAGA CCATCTGT CGCCATGTGG chrX:9697814-9697894 9 1.32e-04 CATACCGA CCATCTGT TGGCATACGC chrI:4299576-4299656 12 1.77e-04 CTCACATAGA ACACCTGT CAGATACCGC chrV:18710307-18710387 33 1.77e-04 ATGACGGCAA ACAGATGG CGTTTTTTCC chrI:6153598-6153678 15 1.77e-04 GATGTACTCC ACACCTGT TCAGTACCTA chrI:240360-240440 4 1.77e-04 TCG ACAGATGG TGTTCTCAAA chrI:3959623-3959703 36 1.77e-04 AATGACGACG ACAGATGG TACAGGAGAA chrIV:12549235-12549315 37 1.77e-04 ATGGAAAAGG ACACCTGT GACCATGAAA chrV:6683477-6683557 67 1.77e-04 ACGGAAATCG ACACCTGT TCGAGA chrIV:9264019-9264099 60 1.77e-04 GGCAGCGGGG ACAGATGG TGACGTTGGA chrX:16988538-16988618 49 1.77e-04 CAGCCGGTTG ACAGATGG CTGTATCATC chrX:10556893-10556973 26 1.77e-04 CCTGCCTTCA ACAGATGG ATGAATATCC chrI:6154958-6155038 15 1.77e-04 CTCATCGACG ACAGATGG CTAGCATTTT chrIV:11867828-11867908 30 1.77e-04 TAGTGTCACG ACAGATGG CACTTCGGTG chrI:2890393-2890473 49 1.77e-04 AGCAGAGACG ACAGATGG CACACAGGCA chrII:4974610-4974690 17 1.77e-04 CCTGAGCTTC ACACCTGT TGACACCCGG chrIV:130298-130378 52 1.77e-04 CCTCGGAGCA ACAGATGG AGAATTATGT chrX:2049037-2049117 58 1.77e-04 AAACAACACA ACAGATGG ACAAAAGATA chrII:9572064-9572144 56 1.77e-04 CCAAGAGTGA ACACCTGT TGTTTCTGAA chrV:3256974-3257054 17 1.77e-04 AGGGTGATGA ACAGATGG TCCCTTACCC chrII:3975063-3975143 44 1.77e-04 TGGCATGGTG ACAGATGG AGGAAACATG chrII:2092122-2092202 29 1.77e-04 CCCCGCCACA ACAGATGG CAAATATTAC chrIV:12552107-12552187 35 1.77e-04 CCGAATGCTC ACAGATGG GTGCAATTAT chrII:4987416-4987496 17 1.77e-04 TTGGCTCATA ACACCTGT TAGCATGCCT chrIV:12821481-12821561 73 1.77e-04 TCGACTGCTC ACACCTGT chrI:2845633-2845713 69 1.77e-04 CTTGGACGTG ACACCTGT GCAA chrV:19127249-19127329 22 2.10e-04 CACCATGGTG ACAGCTGC CTCAGTTGCA chrIV:1886626-1886706 55 2.10e-04 TATCGTACAA ACATATGT CAAACATTAC chrX:11210603-11210683 25 2.10e-04 CACGGTAAAA ACAGCTGC GTGACCCATA chrX:9067386-9067466 58 2.10e-04 GAGCATGCGC ACAGCTGC ACAGCCCTTG chrV:12207759-12207839 43 2.10e-04 CAGGCTGCCA ACATATGT TGAATTCTCT chrI:2844330-2844410 54 2.10e-04 CAGTACATAA ACAGCTGC CGGTGTTGTC chrX:9437042-9437122 68 2.10e-04 GAGGCCCAGC ACAGCTGC CATGA chrX:3320216-3320296 19 2.10e-04 TCATATCGAC ACATATGT CGCCAGCCAT chrX:14504236-14504316 6 2.35e-04 TCTCA CCATCTGG CAACATGTGT chrI:9788063-9788143 29 2.35e-04 CTAGTAGTGG CCATCTGG TGTATATTGC chrIII:12713939-12714019 27 2.35e-04 CAAAACGATG CCATCTGG CTGCAACCCC chrX:12172636-12172716 7 2.35e-04 CTGACA CCATCTGG CGGTGTTGGT chrV:10038830-10038910 56 2.35e-04 GGAACCGAGA GCAGCTGG TGCATTAGTT chrIV:16410225-16410305 51 2.35e-04 AGAAAAAGAG CCATCTGG TGCATTCCTT chrIV:1895150-1895230 16 2.35e-04 CCTGTCCTCA CCATCTGG TGATCACAct chrIV:13001394-13001474 33 2.35e-04 GTGACCCAGA CCATCTGG CGTCGGTGCC chrI:11664997-11665077 22 3.07e-04 CCCACCACTA CCACCTGT CATGCACATT chrIV:6988443-6988523 52 3.07e-04 TCTATGGGTG ACAGGTGT TATGATACAT chrX:11765997-11766077 69 3.07e-04 CTTTTCCATG CCACCTGT GGCC chrI:12921053-12921133 50 3.07e-04 AAGGAGAGCA CCAGATGG CATGCAAACA chrX:12092736-12092816 31 3.07e-04 CTCCTGAACG CCACCTGT CAAATGAGAG chrII:13845316-13845396 1 3.07e-04 . CCAGATGG TTGCTTTCGT chrIV:1361930-1362010 32 3.07e-04 CGCAGACACG ACAGGTGT GCTTTCGTCG chrIII:6929197-6929277 38 3.07e-04 TTCGGTGTCA ACAGGTGT TTTTGAAGAG chrII:873138-873218 42 3.07e-04 GACCGTCTTC CCACCTGT CAATTTCCCT chrII:5988318-5988398 17 3.07e-04 CTCCTGCTAT CCACCTGT CCAACCTACC chrIII:8872165-8872245 66 3.07e-04 TGGAAAAACG ACAGGTGT CTCCTAA chrIV:12540990-12541070 27 3.07e-04 AATTTCAAGA CCACCTGT TCCAAAACCG chrII:11568830-11568910 55 3.07e-04 ATTCTACTCA ACAGGTGT ATACGGTATG chrX:6259217-6259297 35 3.07e-04 GATGGAATTA ACAGGTGT TGAGCAGGTG chrV:11953013-11953093 46 3.07e-04 ACAGTTCTTG CCACCTGT GCGCAGACAC chrII:1217290-1217370 1 3.07e-04 . CCACCTGT CCACAGGTGG chrII:4981867-4981947 55 3.07e-04 ACACCTGCTT CCAGATGG CAATACATAT chrIII:1163025-1163105 22 3.07e-04 TCCCTAGGCA ACAGGTGT GCATATGTTT chrIV:6998077-6998157 38 3.07e-04 GCAGATGTCC ACAGGTGT TCATAGAGAT chrIII:9230219-9230299 70 3.67e-04 CAATGGGCCT GCAGATGT TTG chrI:9903271-9903351 35 3.67e-04 CAGAGAAAGA GCAGATGT TTTCGGAGAA chrIV:1904210-1904290 9 3.67e-04 CATTTTCA CCATATGT TTTGAATAGG chrX:4609788-4609868 11 3.67e-04 AAAACGAACG GCAGATGT TTAGAGGGCA chrX:13881888-13881968 7 3.67e-04 TCACCA CCAGCTGC CCTTTCTATT chrI:10479134-10479214 35 3.67e-04 GACAGCGGGA ACATATGG CATGAGAGGC chrII:4583353-4583433 65 3.67e-04 GCGCACTGAA ACATATGG CTCGATAG chrIV:14299099-14299179 14 3.67e-04 TACGCATCCT CCATATGT CCTCTGCCAC chrV:12206132-12206212 42 3.83e-04 GACACAGAAA ACATCTGC GAACACACGT chrX:4125325-4125405 53 3.83e-04 TCATCTGTGC ACATCTGC TTCACGCATG chrX:2473695-2473775 8 3.83e-04 AATGGTG ACATCTGC TGTCGAATGT chrIII:3821267-3821347 46 3.83e-04 GTGAGCAAGA ACATCTGC CAACATACGG chrX:17409375-17409455 55 3.83e-04 ATTAGTCAGA ACATCTGC GGCGTGCTTC chrI:9904110-9904190 20 3.83e-04 CAATCTGGCG ACATCTGC CACTTCTTAA chrV:6470259-6470339 54 4.14e-04 GTCTCTGACA ACACATGT GCACTTTTGT chrII:5418575-5418655 16 4.67e-04 AAGAAAACGA ACAGATGC TCTTATTCTG chrII:622685-622765 65 4.67e-04 AAGCCTAATG ACAGGTGG CCTAGACG chrIII:12894378-12894458 50 4.67e-04 TCAAACGACG ACAGGTGG TTTCAGAGAA chrX:9435464-9435544 7 4.67e-04 ACGAAG ACAGGTGG TGACACCACT chrII:10554185-10554265 51 4.67e-04 GCCTGTAGTG ACAGGTGG CTGTTTGGGA chrX:7223127-7223207 64 4.67e-04 TTGCGGGCAG ACAGGTGG CTATAATAG chrX:10927287-10927367 70 4.67e-04 GTACCTGTGG CCAGGTGT GTG chrIII:3086631-3086711 39 4.67e-04 TTATAAAATG ACAGGTGG CCCCACGGAC chrII:8410426-8410506 56 4.67e-04 TTTGAATGCA ACAGATGC TCGGCATGTC chrII:1025889-1025969 67 4.67e-04 ATGGCCTAAG CCACCTGG CTAATA chrII:1061832-1061912 54 4.67e-04 ATGGCCTGAG CCACCTGG CTAATACCTC chrII:11886003-11886083 25 5.25e-04 ACAGCGGTGG CCATATGG GGCGCCATCA chrV:18808743-18808823 31 5.25e-04 TCTGCGGACA GCAGATGG CTTGGGATTC chrX:6686818-6686898 55 5.25e-04 TTTGCTGTTG GCAGATGG CCCCCCGACG chrI:4703334-4703414 20 5.25e-04 CCGGTGTGTG GCAGATGG TGAGCCATTT chrX:7967994-7968074 13 5.25e-04 CTCGTCAAGA CCATATGG CACCAAGACG chrII:4640941-4641021 35 5.25e-04 AGAGAAATGA GCAGATGG TCAACTCCCT chrII:2137365-2137445 8 5.25e-04 CCCGACA GCAGATGG CAAATATTAT chrV:14428443-14428523 59 5.25e-04 CAAATGATTA GCACCTGT TTCTGGTCTC chrII:11890725-11890805 10 5.25e-04 CAGCTGCGA GCAGATGG ATTAAGAACA chrII:4585445-4585525 5 5.25e-04 TTGT GCACCTGT CGTCAGGCAG chrIII:4461467-4461547 47 5.25e-04 GTAATTAGTA GCACCTGT GCACAGGCAC chrX:1069123-1069203 71 5.25e-04 CGCACTCGCA GCAGATGG AT chrI:6724847-6724927 29 5.25e-04 CTCTCCTTCA GCAGATGG CCACTGGGAC chrIII:5120780-5120860 49 5.25e-04 TCAGCTGTGA ACATGTGT GAACGATATA chrI:14067500-14067580 26 5.25e-04 CTCATTATAA GCAGATGG CCCTGGACTA chrII:9965904-9965984 20 5.25e-04 AGCTTGTCGC GCACCTGT TACCACAGGT chrI:14788750-14788830 51 5.25e-04 GGAGGGAACA GCAGATGG TCGTATTTTA chrII:11889525-11889605 1 5.68e-04 . CCATCTGC CCTCCTTCCC chrIV:177643-177723 49 5.68e-04 AATAACCTAA CCATCTGC CTCTTTTCCG chrV:6681668-6681748 66 5.68e-04 CACAAGGCTG GCAGCTGC TGCTCCC chrI:1693100-1693180 26 5.68e-04 CTGATTCTTG CCATctgc tgctgctgct chrII:9059166-9059246 22 5.68e-04 AAGAAAGAGC CCATCTGC TAGGTAGCAT chrI:6458769-6458849 38 5.68e-04 AAGGTGAACA GCAGCTGC TGGCTTCCTC chrX:1801151-1801231 32 5.68e-04 CGCGCACTGG CCATCTGC TACCCCTCTA chrI:9910678-9910758 9 5.68e-04 GGAGGACA CCATCTGC TTAGCGGCGT chrX:7560296-7560376 47 5.99e-04 TTGCCAACGC ACACATGG TGTTTGGCAT chrIII:4455192-4455272 19 6.40e-04 AGTTATGTCA ACACCTGC CATCGTATGG chrIV:5093559-5093639 23 6.40e-04 AACACGTGGA ACACCTGC AAAATGGAAA chrV:13018330-13018410 6 6.40e-04 GAAGA ACACCTGC CTGACGCCGT chrII:11077148-11077228 17 6.40e-04 CTGCTGACAA ACACCTGC TACCAAAGGG chrV:4969024-4969104 52 6.40e-04 TCCAACCTCA CCAGGTGG TCTCTTTCTC chrI:9374771-9374851 17 7.11e-04 GTCTTCGGCG CCATGTGT TGCCTTCCAT chrIII:8506420-8506500 24 7.11e-04 TTGCGGAAGA GCAGGTGT TCCCCACCTT chrII:7815619-7815699 28 7.11e-04 GCAGTTGTCG GCAGGTGT GTGGTAGACG chrIV:565000-565080 37 8.27e-04 ATTAGCGTGT GCACATGT TCCTGATGAA chrIV:178738-178818 69 8.80e-04 GGAAAAGAGA CCATATGC CATC chrIV:5964828-5964908 20 8.95e-04 TCGCTTTTTT GCATGTGT CACTGAACAG chrI:14962370-14962450 20 9.69e-04 TTAGCACCAC CCAACTGT TGCCATAAGA chrIV:9852993-9853073 34 1.11e-03 CGGAGGAGCT CCAACTGG TGCTTCCACC chrIV:10421461-10421541 24 1.16e-03 ACAATGCGCA CCATGTGC CGTCACAGTG chrV:8356441-8356521 38 1.21e-03 CCGTCTGCCG ACAGCCGT TCTCGTTGGT chrX:2217680-2217760 41 1.24e-03 AACGGCTCCA ACAACTGC TTCCCTTTCT chrV:9767805-9767885 34 1.28e-03 TGGCTCGGTG GCACATGC TCCAGAGATG chrIII:9768047-9768127 46 1.35e-03 ACACGGTCCT CCAAATGG TCAACCTGGA chrX:6258554-6258634 24 1.35e-03 ATGCATTTCA CCAAATGG TGGGTAGCCT chrV:6685670-6685750 20 1.41e-03 GAGAAGACAT GCAAATGT CATGGTATGG chrIV:7455039-7455119 45 1.42e-03 TCATCTGGTG ACAGACGT ATTCGAGATA chrV:3448067-3448147 14 1.61e-03 ACCTCTGCGA ACAGACGG GATGGAACAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:9661253-9661333 1.5e-05 13_[+1]_59 chrII:14248411-14248491 1.5e-05 49_[+1]_23 chrIII:11141771-11141851 1.5e-05 46_[+1]_26 chrI:9570551-9570631 1.5e-05 40_[+1]_32 chrX:4972176-4972256 1.5e-05 31_[+1]_41 chrI:274508-274588 1.5e-05 47_[+1]_25 chrI:4786144-4786224 1.5e-05 37_[+1]_35 chrIV:8068424-8068504 1.5e-05 31_[+1]_41 chrII:6936081-6936161 1.5e-05 23_[+1]_49 chrIV:4448469-4448549 1.5e-05 59_[+1]_13 chrI:6285407-6285487 1.5e-05 60_[+1]_12 chrX:13519176-13519256 4.2e-05 39_[+1]_33 chrX:11211528-11211608 4.2e-05 20_[+1]_52 chrX:13221515-13221595 4.2e-05 54_[+1]_18 chrX:12183315-12183395 4.2e-05 27_[+1]_45 chrI:3338412-3338492 4.2e-05 41_[+1]_31 chrI:124823-124903 4.2e-05 44_[+1]_28 chrIV:17215247-17215327 4.2e-05 18_[+1]_54 chrX:7209319-7209399 4.2e-05 3_[+1]_69 chrII:12991346-12991426 4.2e-05 1_[+1]_71 chrIII:4092194-4092274 4.2e-05 19_[+1]_53 chrV:9546268-9546348 5.9e-05 44_[+1]_28 chrI:11203269-11203349 5.9e-05 2_[+1]_70 chrII:937431-937511 5.9e-05 23_[+1]_49 chrIV:9770839-9770919 5.9e-05 18_[+1]_54 chrX:12689612-12689692 5.9e-05 59_[+1]_13 chrI:11208173-11208253 5.9e-05 47_[+1]_25 chrI:13528223-13528303 5.9e-05 10_[+1]_62 chrII:629927-630007 5.9e-05 24_[+1]_48 chrII:2681827-2681907 5.9e-05 7_[+1]_65 chrX:4513696-4513776 5.9e-05 48_[+1]_24 chrI:13629000-13629080 5.9e-05 66_[+1]_6 chrI:13501053-13501133 5.9e-05 47_[+1]_25 chrX:17150238-17150318 5.9e-05 48_[+1]_24 chrX:2229466-2229546 5.9e-05 45_[+1]_27 chrV:13120235-13120315 5.9e-05 70_[+1]_2 chrIV:7078832-7078912 7.6e-05 28_[+1]_44 chrII:7813488-7813568 7.6e-05 33_[+1]_39 chrV:3688878-3688958 7.6e-05 2_[+1]_70 chrX:12188799-12188879 7.6e-05 61_[+1]_11 chrX:12854320-12854400 7.6e-05 24_[+1]_48 chrIII:5720974-5721054 7.6e-05 62_[+1]_10 chrIII:5183521-5183601 7.6e-05 29_[+1]_43 chrX:7162933-7163013 7.6e-05 29_[+1]_43 chrV:13169303-13169383 7.6e-05 62_[+1]_10 chrIV:13190222-13190302 7.6e-05 56_[+1]_16 chrX:2231279-2231359 8.8e-05 52_[+1]_20 chrX:7469543-7469623 8.8e-05 47_[+1]_25 chrIII:4519609-4519689 0.00013 27_[+1]_45 chrI:6280427-6280507 0.00013 51_[+1]_21 chrIII:5501510-5501590 0.00013 32_[+1]_40 chrI:3101909-3101989 0.00013 35_[+1]_37 chrII:5933247-5933327 0.00013 38_[+1]_34 chrI:1315573-1315653 0.00013 4_[+1]_68 chrII:10784961-10785041 0.00013 21_[+1]_51 chrX:14486618-14486698 0.00013 24_[+1]_48 chrI:3603317-3603397 0.00013 43_[+1]_29 chrIV:12685953-12686033 0.00013 11_[+1]_61 chrII:7809652-7809732 0.00013 31_[+1]_41 chrIV:5929111-5929191 0.00013 37_[+1]_35 chrX:13146145-13146225 0.00013 25_[+1]_47 chrII:8858039-8858119 0.00013 45_[+1]_27 chrX:5243750-5243830 0.00013 38_[+1]_34 chrX:9702931-9703011 0.00013 24_[+1]_48 chrI:11589073-11589153 0.00013 1_[+1]_71 chrIV:16380407-16380487 0.00013 72_[+1] chrI:2710910-2710990 0.00013 8_[+1]_64 chrIII:6605608-6605688 0.00013 55_[+1]_17 chrX:2328160-2328240 0.00013 16_[+1]_56 chrX:10424877-10424957 0.00013 48_[+1]_24 chrIII:12611590-12611670 0.00013 38_[+1]_34 chrII:12984838-12984918 0.00013 15_[+1]_57 chrX:11673505-11673585 0.00013 37_[+1]_35 chrIII:869061-869141 0.00013 43_[+1]_29 chrIV:17206683-17206763 0.00013 51_[+1]_21 chrI:5411437-5411517 0.00013 57_[+1]_15 chrV:14438499-14438579 0.00013 23_[+1]_49 chrI:9909024-9909104 0.00013 27_[+1]_45 chrV:13021695-13021775 0.00013 62_[+1]_10 chrII:5220046-5220126 0.00013 42_[+1]_30 chrX:9697814-9697894 0.00013 8_[+1]_64 chrI:4299576-4299656 0.00018 11_[+1]_61 chrV:18710307-18710387 0.00018 32_[+1]_40 chrI:6153598-6153678 0.00018 14_[+1]_58 chrI:240360-240440 0.00018 3_[+1]_69 chrI:3959623-3959703 0.00018 35_[+1]_37 chrIV:12549235-12549315 0.00018 36_[+1]_36 chrV:6683477-6683557 0.00018 66_[+1]_6 chrIV:9264019-9264099 0.00018 59_[+1]_13 chrX:16988538-16988618 0.00018 48_[+1]_24 chrX:10556893-10556973 0.00018 25_[+1]_47 chrI:6154958-6155038 0.00018 14_[+1]_58 chrIV:11867828-11867908 0.00018 29_[+1]_43 chrI:2890393-2890473 0.00018 48_[+1]_24 chrII:4974610-4974690 0.00018 16_[+1]_56 chrIV:130298-130378 0.00018 51_[+1]_21 chrX:2049037-2049117 0.00018 57_[+1]_15 chrII:9572064-9572144 0.00018 55_[+1]_17 chrV:3256974-3257054 0.00018 16_[+1]_56 chrII:3975063-3975143 0.00018 43_[+1]_29 chrII:2092122-2092202 0.00018 28_[+1]_44 chrIV:12552107-12552187 0.00018 34_[+1]_38 chrII:4987416-4987496 0.00018 16_[+1]_56 chrIV:12821481-12821561 0.00018 72_[+1] chrI:2845633-2845713 0.00018 68_[+1]_4 chrV:19127249-19127329 0.00021 21_[+1]_51 chrIV:1886626-1886706 0.00021 54_[+1]_18 chrX:11210603-11210683 0.00021 24_[+1]_48 chrX:9067386-9067466 0.00021 57_[+1]_15 chrV:12207759-12207839 0.00021 42_[+1]_30 chrI:2844330-2844410 0.00021 53_[+1]_19 chrX:9437042-9437122 0.00021 67_[+1]_5 chrX:3320216-3320296 0.00021 18_[+1]_54 chrX:14504236-14504316 0.00024 5_[+1]_67 chrI:9788063-9788143 0.00024 28_[+1]_44 chrIII:12713939-12714019 0.00024 26_[+1]_46 chrX:12172636-12172716 0.00024 6_[+1]_66 chrV:10038830-10038910 0.00024 55_[+1]_17 chrIV:16410225-16410305 0.00024 50_[+1]_22 chrIV:1895150-1895230 0.00024 15_[+1]_57 chrIV:13001394-13001474 0.00024 32_[+1]_40 chrI:11664997-11665077 0.00031 21_[+1]_51 chrIV:6988443-6988523 0.00031 51_[+1]_21 chrX:11765997-11766077 0.00031 68_[+1]_4 chrI:12921053-12921133 0.00031 49_[+1]_23 chrX:12092736-12092816 0.00031 30_[+1]_42 chrII:13845316-13845396 0.00031 [+1]_72 chrIV:1361930-1362010 0.00031 31_[+1]_41 chrIII:6929197-6929277 0.00031 37_[+1]_35 chrII:873138-873218 0.00031 41_[+1]_31 chrII:5988318-5988398 0.00031 16_[+1]_56 chrIII:8872165-8872245 0.00031 65_[+1]_7 chrIV:12540990-12541070 0.00031 26_[+1]_46 chrII:11568830-11568910 0.00031 54_[+1]_18 chrX:6259217-6259297 0.00031 34_[+1]_38 chrV:11953013-11953093 0.00031 45_[+1]_27 chrII:1217290-1217370 0.00031 [+1]_72 chrII:4981867-4981947 0.00031 54_[+1]_18 chrIII:1163025-1163105 0.00031 21_[+1]_51 chrIV:6998077-6998157 0.00031 37_[+1]_35 chrIII:9230219-9230299 0.00037 69_[+1]_3 chrI:9903271-9903351 0.00037 34_[+1]_38 chrIV:1904210-1904290 0.00037 8_[+1]_64 chrX:4609788-4609868 0.00037 10_[+1]_62 chrX:13881888-13881968 0.00037 6_[+1]_66 chrI:10479134-10479214 0.00037 34_[+1]_38 chrII:4583353-4583433 0.00037 64_[+1]_8 chrIV:14299099-14299179 0.00037 13_[+1]_59 chrV:12206132-12206212 0.00038 41_[+1]_31 chrX:4125325-4125405 0.00038 52_[+1]_20 chrX:2473695-2473775 0.00038 7_[+1]_65 chrIII:3821267-3821347 0.00038 45_[+1]_27 chrX:17409375-17409455 0.00038 54_[+1]_18 chrI:9904110-9904190 0.00038 19_[+1]_53 chrV:6470259-6470339 0.00041 53_[+1]_19 chrII:5418575-5418655 0.00047 15_[+1]_57 chrII:622685-622765 0.00047 64_[+1]_8 chrIII:12894378-12894458 0.00047 49_[+1]_23 chrX:9435464-9435544 0.00047 6_[+1]_66 chrII:10554185-10554265 0.00047 50_[+1]_22 chrX:7223127-7223207 0.00047 63_[+1]_9 chrX:10927287-10927367 0.00047 69_[+1]_3 chrIII:3086631-3086711 0.00047 38_[+1]_34 chrII:8410426-8410506 0.00047 55_[+1]_17 chrII:1025889-1025969 0.00047 66_[+1]_6 chrII:1061832-1061912 0.00047 53_[+1]_19 chrII:11886003-11886083 0.00052 24_[+1]_48 chrV:18808743-18808823 0.00052 30_[+1]_42 chrX:6686818-6686898 0.00052 54_[+1]_18 chrI:4703334-4703414 0.00052 19_[+1]_53 chrX:7967994-7968074 0.00052 12_[+1]_60 chrII:4640941-4641021 0.00052 34_[+1]_38 chrII:2137365-2137445 0.00052 7_[+1]_65 chrV:14428443-14428523 0.00052 58_[+1]_14 chrII:11890725-11890805 0.00052 9_[+1]_63 chrII:4585445-4585525 0.00052 4_[+1]_68 chrIII:4461467-4461547 0.00052 46_[+1]_26 chrX:1069123-1069203 0.00052 70_[+1]_2 chrI:6724847-6724927 0.00052 28_[+1]_44 chrIII:5120780-5120860 0.00052 48_[+1]_24 chrI:14067500-14067580 0.00052 25_[+1]_47 chrII:9965904-9965984 0.00052 19_[+1]_53 chrI:14788750-14788830 0.00052 50_[+1]_22 chrII:11889525-11889605 0.00057 [+1]_72 chrIV:177643-177723 0.00057 48_[+1]_24 chrV:6681668-6681748 0.00057 65_[+1]_7 chrI:1693100-1693180 0.00057 25_[+1]_47 chrII:9059166-9059246 0.00057 21_[+1]_51 chrI:6458769-6458849 0.00057 37_[+1]_35 chrX:1801151-1801231 0.00057 31_[+1]_41 chrI:9910678-9910758 0.00057 8_[+1]_64 chrX:7560296-7560376 0.0006 46_[+1]_26 chrIII:4455192-4455272 0.00064 18_[+1]_54 chrIV:5093559-5093639 0.00064 22_[+1]_50 chrV:13018330-13018410 0.00064 5_[+1]_67 chrII:11077148-11077228 0.00064 16_[+1]_56 chrV:4969024-4969104 0.00064 51_[+1]_21 chrI:9374771-9374851 0.00071 16_[+1]_56 chrIII:8506420-8506500 0.00071 23_[+1]_49 chrII:7815619-7815699 0.00071 27_[+1]_45 chrIV:565000-565080 0.00083 36_[+1]_36 chrIV:178738-178818 0.00088 68_[+1]_4 chrIV:5964828-5964908 0.00089 19_[+1]_53 chrI:14962370-14962450 0.00097 19_[+1]_53 chrIV:9852993-9853073 0.0011 33_[+1]_39 chrIV:10421461-10421541 0.0012 23_[+1]_49 chrV:8356441-8356521 0.0012 37_[+1]_35 chrX:2217680-2217760 0.0012 40_[+1]_32 chrV:9767805-9767885 0.0013 33_[+1]_39 chrIII:9768047-9768127 0.0013 45_[+1]_27 chrX:6258554-6258634 0.0013 23_[+1]_49 chrV:6685670-6685750 0.0014 19_[+1]_53 chrIV:7455039-7455119 0.0014 44_[+1]_28 chrV:3448067-3448147 0.0016 13_[+1]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MCAKCTGK width=8 seqs=214 chrIII:9661253-9661333 ( 14) ACAGCTGT 1 chrII:14248411-14248491 ( 50) ACAGCTGT 1 chrIII:11141771-11141851 ( 47) ACAGCTGT 1 chrI:9570551-9570631 ( 41) ACAGCTGT 1 chrX:4972176-4972256 ( 32) ACAGCTGT 1 chrI:274508-274588 ( 48) ACAGCTGT 1 chrI:4786144-4786224 ( 38) ACAGCTGT 1 chrIV:8068424-8068504 ( 32) ACAGCTGT 1 chrII:6936081-6936161 ( 24) ACAGCTGT 1 chrIV:4448469-4448549 ( 60) ACAGCTGT 1 chrI:6285407-6285487 ( 61) ACAGCTGT 1 chrX:13519176-13519256 ( 40) ACAGCTGG 1 chrX:11211528-11211608 ( 21) CCAGCTGT 1 chrX:13221515-13221595 ( 55) CCAGCTGT 1 chrX:12183315-12183395 ( 28) ACAGCTGG 1 chrI:3338412-3338492 ( 42) CCAGCTGT 1 chrI:124823-124903 ( 45) ACAGCTGG 1 chrIV:17215247-17215327 ( 19) ACAGCTGG 1 chrX:7209319-7209399 ( 4) ACAGCTGG 1 chrII:12991346-12991426 ( 2) CCAGCTGT 1 chrIII:4092194-4092274 ( 20) CCAGCTGT 1 chrV:9546268-9546348 ( 45) ACATCTGT 1 chrI:11203269-11203349 ( 3) ACATCTGT 1 chrII:937431-937511 ( 24) ACATCTGT 1 chrIV:9770839-9770919 ( 19) ACATCTGT 1 chrX:12689612-12689692 ( 60) ACATCTGT 1 chrI:11208173-11208253 ( 48) ACATCTGT 1 chrI:13528223-13528303 ( 11) ACATCTGT 1 chrII:629927-630007 ( 25) ACATCTGT 1 chrII:2681827-2681907 ( 8) ACATCTGT 1 chrX:4513696-4513776 ( 49) ACATCTGT 1 chrI:13629000-13629080 ( 67) ACATCTGT 1 chrI:13501053-13501133 ( 48) ACATCTGT 1 chrX:17150238-17150318 ( 49) ACATCTGT 1 chrX:2229466-2229546 ( 46) ACATCTGT 1 chrV:13120235-13120315 ( 71) ACATCTGT 1 chrIV:7078832-7078912 ( 29) ACAGATGT 1 chrII:7813488-7813568 ( 34) ACAGATGT 1 chrV:3688878-3688958 ( 3) ACAGATGT 1 chrX:12188799-12188879 ( 62) ACAGATGT 1 chrX:12854320-12854400 ( 25) ACAGATGT 1 chrIII:5720974-5721054 ( 63) ACAGATGT 1 chrIII:5183521-5183601 ( 30) ACAGATGT 1 chrX:7162933-7163013 ( 30) ACAGATGT 1 chrV:13169303-13169383 ( 63) ACAGATGT 1 chrIV:13190222-13190302 ( 57) ACAGATGT 1 chrX:2231279-2231359 ( 53) CCAGCTGG 1 chrX:7469543-7469623 ( 48) CCAGCTGG 1 chrIII:4519609-4519689 ( 28) CCATCTGT 1 chrI:6280427-6280507 ( 52) CCATCTGT 1 chrIII:5501510-5501590 ( 33) CCATCTGT 1 chrI:3101909-3101989 ( 36) GCAGCTGT 1 chrII:5933247-5933327 ( 39) CCATCTGT 1 chrI:1315573-1315653 ( 5) CCATCTGT 1 chrII:10784961-10785041 ( 22) GCAGCTGT 1 chrX:14486618-14486698 ( 25) CCATCTGT 1 chrI:3603317-3603397 ( 44) GCAGCTGT 1 chrIV:12685953-12686033 ( 12) ACATCTGG 1 chrII:7809652-7809732 ( 32) ACATCTGG 1 chrIV:5929111-5929191 ( 38) ACATCTGG 1 chrX:13146145-13146225 ( 26) CCATCTGT 1 chrII:8858039-8858119 ( 46) CCATCTGT 1 chrX:5243750-5243830 ( 39) CCATCTGT 1 chrX:9702931-9703011 ( 25) CCATCTGT 1 chrI:11589073-11589153 ( 2) CCATCTGT 1 chrIV:16380407-16380487 ( 73) GCAGCTGT 1 chrI:2710910-2710990 ( 9) GCAGCTGT 1 chrIII:6605608-6605688 ( 56) CCATCTGT 1 chrX:2328160-2328240 ( 17) CCATCTGT 1 chrX:10424877-10424957 ( 49) CCATCTGT 1 chrIII:12611590-12611670 ( 39) ACATCTGG 1 chrII:12984838-12984918 ( 16) CCATCTGT 1 chrX:11673505-11673585 ( 38) CCATCTGT 1 chrIII:869061-869141 ( 44) CCATCTGT 1 chrIV:17206683-17206763 ( 52) GCAGCTGT 1 chrI:5411437-5411517 ( 58) ACATCTGG 1 chrV:14438499-14438579 ( 24) GCAGCTGT 1 chrI:9909024-9909104 ( 28) ACATCTGG 1 chrV:13021695-13021775 ( 63) CCATCTGT 1 chrII:5220046-5220126 ( 43) CCATCTGT 1 chrX:9697814-9697894 ( 9) CCATCTGT 1 chrI:4299576-4299656 ( 12) ACACCTGT 1 chrV:18710307-18710387 ( 33) ACAGATGG 1 chrI:6153598-6153678 ( 15) ACACCTGT 1 chrI:240360-240440 ( 4) ACAGATGG 1 chrI:3959623-3959703 ( 36) ACAGATGG 1 chrIV:12549235-12549315 ( 37) ACACCTGT 1 chrV:6683477-6683557 ( 67) ACACCTGT 1 chrIV:9264019-9264099 ( 60) ACAGATGG 1 chrX:16988538-16988618 ( 49) ACAGATGG 1 chrX:10556893-10556973 ( 26) ACAGATGG 1 chrI:6154958-6155038 ( 15) ACAGATGG 1 chrIV:11867828-11867908 ( 30) ACAGATGG 1 chrI:2890393-2890473 ( 49) ACAGATGG 1 chrII:4974610-4974690 ( 17) ACACCTGT 1 chrIV:130298-130378 ( 52) ACAGATGG 1 chrX:2049037-2049117 ( 58) ACAGATGG 1 chrII:9572064-9572144 ( 56) ACACCTGT 1 chrV:3256974-3257054 ( 17) ACAGATGG 1 chrII:3975063-3975143 ( 44) ACAGATGG 1 chrII:2092122-2092202 ( 29) ACAGATGG 1 chrIV:12552107-12552187 ( 35) ACAGATGG 1 chrII:4987416-4987496 ( 17) ACACCTGT 1 chrIV:12821481-12821561 ( 73) ACACCTGT 1 chrI:2845633-2845713 ( 69) ACACCTGT 1 chrV:19127249-19127329 ( 22) ACAGCTGC 1 chrIV:1886626-1886706 ( 55) ACATATGT 1 chrX:11210603-11210683 ( 25) ACAGCTGC 1 chrX:9067386-9067466 ( 58) ACAGCTGC 1 chrV:12207759-12207839 ( 43) ACATATGT 1 chrI:2844330-2844410 ( 54) ACAGCTGC 1 chrX:9437042-9437122 ( 68) ACAGCTGC 1 chrX:3320216-3320296 ( 19) ACATATGT 1 chrX:14504236-14504316 ( 6) CCATCTGG 1 chrI:9788063-9788143 ( 29) CCATCTGG 1 chrIII:12713939-12714019 ( 27) CCATCTGG 1 chrX:12172636-12172716 ( 7) CCATCTGG 1 chrV:10038830-10038910 ( 56) GCAGCTGG 1 chrIV:16410225-16410305 ( 51) CCATCTGG 1 chrIV:1895150-1895230 ( 16) CCATCTGG 1 chrIV:13001394-13001474 ( 33) CCATCTGG 1 chrI:11664997-11665077 ( 22) CCACCTGT 1 chrIV:6988443-6988523 ( 52) ACAGGTGT 1 chrX:11765997-11766077 ( 69) CCACCTGT 1 chrI:12921053-12921133 ( 50) CCAGATGG 1 chrX:12092736-12092816 ( 31) CCACCTGT 1 chrII:13845316-13845396 ( 1) CCAGATGG 1 chrIV:1361930-1362010 ( 32) ACAGGTGT 1 chrIII:6929197-6929277 ( 38) ACAGGTGT 1 chrII:873138-873218 ( 42) CCACCTGT 1 chrII:5988318-5988398 ( 17) CCACCTGT 1 chrIII:8872165-8872245 ( 66) ACAGGTGT 1 chrIV:12540990-12541070 ( 27) CCACCTGT 1 chrII:11568830-11568910 ( 55) ACAGGTGT 1 chrX:6259217-6259297 ( 35) ACAGGTGT 1 chrV:11953013-11953093 ( 46) CCACCTGT 1 chrII:1217290-1217370 ( 1) CCACCTGT 1 chrII:4981867-4981947 ( 55) CCAGATGG 1 chrIII:1163025-1163105 ( 22) ACAGGTGT 1 chrIV:6998077-6998157 ( 38) ACAGGTGT 1 chrIII:9230219-9230299 ( 70) GCAGATGT 1 chrI:9903271-9903351 ( 35) GCAGATGT 1 chrIV:1904210-1904290 ( 9) CCATATGT 1 chrX:4609788-4609868 ( 11) GCAGATGT 1 chrX:13881888-13881968 ( 7) CCAGCTGC 1 chrI:10479134-10479214 ( 35) ACATATGG 1 chrII:4583353-4583433 ( 65) ACATATGG 1 chrIV:14299099-14299179 ( 14) CCATATGT 1 chrV:12206132-12206212 ( 42) ACATCTGC 1 chrX:4125325-4125405 ( 53) ACATCTGC 1 chrX:2473695-2473775 ( 8) ACATCTGC 1 chrIII:3821267-3821347 ( 46) ACATCTGC 1 chrX:17409375-17409455 ( 55) ACATCTGC 1 chrI:9904110-9904190 ( 20) ACATCTGC 1 chrV:6470259-6470339 ( 54) ACACATGT 1 chrII:5418575-5418655 ( 16) ACAGATGC 1 chrII:622685-622765 ( 65) ACAGGTGG 1 chrIII:12894378-12894458 ( 50) ACAGGTGG 1 chrX:9435464-9435544 ( 7) ACAGGTGG 1 chrII:10554185-10554265 ( 51) ACAGGTGG 1 chrX:7223127-7223207 ( 64) ACAGGTGG 1 chrX:10927287-10927367 ( 70) CCAGGTGT 1 chrIII:3086631-3086711 ( 39) ACAGGTGG 1 chrII:8410426-8410506 ( 56) ACAGATGC 1 chrII:1025889-1025969 ( 67) CCACCTGG 1 chrII:1061832-1061912 ( 54) CCACCTGG 1 chrII:11886003-11886083 ( 25) CCATATGG 1 chrV:18808743-18808823 ( 31) GCAGATGG 1 chrX:6686818-6686898 ( 55) GCAGATGG 1 chrI:4703334-4703414 ( 20) GCAGATGG 1 chrX:7967994-7968074 ( 13) CCATATGG 1 chrII:4640941-4641021 ( 35) GCAGATGG 1 chrII:2137365-2137445 ( 8) GCAGATGG 1 chrV:14428443-14428523 ( 59) GCACCTGT 1 chrII:11890725-11890805 ( 10) GCAGATGG 1 chrII:4585445-4585525 ( 5) GCACCTGT 1 chrIII:4461467-4461547 ( 47) GCACCTGT 1 chrX:1069123-1069203 ( 71) GCAGATGG 1 chrI:6724847-6724927 ( 29) GCAGATGG 1 chrIII:5120780-5120860 ( 49) ACATGTGT 1 chrI:14067500-14067580 ( 26) GCAGATGG 1 chrII:9965904-9965984 ( 20) GCACCTGT 1 chrI:14788750-14788830 ( 51) GCAGATGG 1 chrII:11889525-11889605 ( 1) CCATCTGC 1 chrIV:177643-177723 ( 49) CCATCTGC 1 chrV:6681668-6681748 ( 66) GCAGCTGC 1 chrI:1693100-1693180 ( 26) CCATCTGC 1 chrII:9059166-9059246 ( 22) CCATCTGC 1 chrI:6458769-6458849 ( 38) GCAGCTGC 1 chrX:1801151-1801231 ( 32) CCATCTGC 1 chrI:9910678-9910758 ( 9) CCATCTGC 1 chrX:7560296-7560376 ( 47) ACACATGG 1 chrIII:4455192-4455272 ( 19) ACACCTGC 1 chrIV:5093559-5093639 ( 23) ACACCTGC 1 chrV:13018330-13018410 ( 6) ACACCTGC 1 chrII:11077148-11077228 ( 17) ACACCTGC 1 chrV:4969024-4969104 ( 52) CCAGGTGG 1 chrI:9374771-9374851 ( 17) CCATGTGT 1 chrIII:8506420-8506500 ( 24) GCAGGTGT 1 chrII:7815619-7815699 ( 28) GCAGGTGT 1 chrIV:565000-565080 ( 37) GCACATGT 1 chrIV:178738-178818 ( 69) CCATATGC 1 chrIV:5964828-5964908 ( 20) GCATGTGT 1 chrI:14962370-14962450 ( 20) CCAACTGT 1 chrIV:9852993-9853073 ( 34) CCAACTGG 1 chrIV:10421461-10421541 ( 24) CCATGTGC 1 chrV:8356441-8356521 ( 38) ACAGCCGT 1 chrX:2217680-2217760 ( 41) ACAACTGC 1 chrV:9767805-9767885 ( 34) GCACATGC 1 chrIII:9768047-9768127 ( 46) CCAAATGG 1 chrX:6258554-6258634 ( 24) CCAAATGG 1 chrV:6685670-6685750 ( 20) GCAAATGT 1 chrIV:7455039-7455119 ( 45) ACAGACGT 1 chrV:3448067-3448147 ( 14) ACAGACGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.96219 E= 1.7e-192 102 35 -57 -1439 -1439 203 -1439 -1439 193 -1439 -1439 -1439 -323 -76 107 39 14 131 -115 -1439 -1439 -413 -1439 191 -1439 -1439 213 -1439 -1439 -81 45 106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 214 E= 1.7e-192 0.532710 0.313084 0.154206 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.028037 0.144860 0.481308 0.345794 0.289720 0.607477 0.102804 0.000000 0.000000 0.014019 0.000000 0.985981 0.000000 0.000000 1.000000 0.000000 0.000000 0.140187 0.313084 0.546729 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKCTGK MEME-1 regular expression -------------------------------------------------------------------------------- [AC]CA[GT][CA]TG[TG] -------------------------------------------------------------------------------- Time 5.09 secs. ******************************************************************************** ******************************************************************************** MOTIF CTBYGTCT MEME-2 width = 8 sites = 36 llr = 285 E-value = 1.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 9:342:a: probability G 1:4:6::: matrix T :a263a:a bits 2.1 * 1.9 * *** 1.7 * *** 1.5 ** *** Relative 1.3 ** *** Entropy 1.1 ** * *** (11.4 bits) 0.9 ** * *** 0.6 ** ***** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGTGTCT consensus CCT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIII:9661253-9661333 29 1.51e-05 TGTGTCTCAT CTGTGTCT TTCTTAATTG chrIV:17215247-17215327 37 1.51e-05 CTCACCAGCT CTGTGTCT GCGTCTCTTC chrV:1572763-1572843 28 1.51e-05 TCTGTTTGAT CTGTGTCT AGCGCTCTCT chrI:6153598-6153678 42 3.12e-05 ATCTGCGTCT CTCTGTCT TCTACACTAT chrIV:12685953-12686033 41 3.12e-05 CTCTCTCTCT CTCTGTCT TTCCTTTGAG chrI:11664997-11665077 44 4.52e-05 CACATTTTCT CTGCGTCT CTCACTTCAT chrV:3688878-3688958 50 4.52e-05 CTCTCACTTG CTGCGTCT CTCCGGCCCC chrII:622685-622765 2 4.52e-05 T CTGCGTCT CTCGCTGAGA chrI:13528223-13528303 39 4.52e-05 ATTTTGCTGT CTGCGTCT CTTACTCTCT chrII:873138-873218 66 4.52e-05 CCCTGTTTCT CTGCGTCT ATGTTCC chrIII:1163025-1163105 60 4.52e-05 TTTTTACTGC CTGCGTCT TCTTAAGAAA chrV:3448067-3448147 73 6.25e-05 GGGAGAAGAA CTTTGTCT chrI:9374771-9374851 3 6.25e-05 TC CTTTGTCT TCGGCGCCAT chrV:6470259-6470339 40 7.75e-05 GGGTTAATAG CTCCGTCT CTGACAACAC chrX:4618062-4618142 43 9.48e-05 TTCTTCGAAA CTGTTTCT CGTTTTTTGT chrI:6458769-6458849 4 9.48e-05 TAG CTGTTTCT GGGAAATTCT chrI:1315573-1315653 60 1.11e-04 ATACATATAt ctgtctct ctgctacttt chrV:4969024-4969104 61 1.29e-04 ACCAGGTGGT CTCTTTCT CGGCTTATTT chrI:12921053-12921133 70 1.29e-04 TGCAAACATT CTCTTTCT CTT chrIV:177643-177723 71 1.46e-04 TTTCCGAAAC CTTCGTCT CA chrIV:12158106-12158186 18 1.63e-04 CCGCAtctct ctctctct ctacctcttc chrIV:1895150-1895230 36 1.63e-04 ATCACActct ctctctct ctctaaccct chrII:11890725-11890805 71 1.63e-04 TGTActctct ctctctct ct chrI:9904110-9904190 44 1.63e-04 TTAATACGGT CTCTCTCT CTCTTCGCTC chrIV:13001394-13001474 61 1.79e-04 CCATCAGCAC CTGCTTCT CCATCACTAC chrIV:6988443-6988523 37 2.28e-04 ATATATGTGT GTGTGTCT ATGGGTGACA chrX:11765997-11766077 50 2.28e-04 CTCTCTTTCC CTTTTTCT GCTTTTCCAT chrIII:7657067-7657147 59 2.28e-04 TACCTCTCCC GTGTGTCT TCACTTTTCT chrI:11589073-11589153 39 2.28e-04 CCGGTGACAG CTGCCTCT CCACGCCTGC chrIV:8068424-8068504 67 2.28e-04 CGTGTCGATG CTTTTTCT TCTCTT chrII:4577557-4577637 58 2.45e-04 CATACGCTCT CTCCTTCT TCCGGTCAAA chrI:6280427-6280507 21 2.64e-04 TTTGTAAACC CTTTCTCT AACAGACACT chrII:10784961-10785041 38 2.95e-04 GTTGCACCTA GTCTGTCT TTGAGATGCT chrX:4972176-4972256 19 3.26e-04 GTTCGAGAAT CTTCTTCT GTTTCACAGC chrIII:8872165-8872245 28 3.60e-04 CGTGTGTGCC GTTTGTCT ATAGAAATAA chrIV:11867828-11867908 52 3.74e-04 TCGGTGTACC GTCCGTCT CCGGTCACTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:9661253-9661333 1.5e-05 28_[+2]_44 chrIV:17215247-17215327 1.5e-05 36_[+2]_36 chrV:1572763-1572843 1.5e-05 27_[+2]_45 chrI:6153598-6153678 3.1e-05 41_[+2]_31 chrIV:12685953-12686033 3.1e-05 40_[+2]_32 chrI:11664997-11665077 4.5e-05 43_[+2]_29 chrV:3688878-3688958 4.5e-05 49_[+2]_23 chrII:622685-622765 4.5e-05 1_[+2]_71 chrI:13528223-13528303 4.5e-05 38_[+2]_34 chrII:873138-873218 4.5e-05 65_[+2]_7 chrIII:1163025-1163105 4.5e-05 59_[+2]_13 chrV:3448067-3448147 6.2e-05 72_[+2] chrI:9374771-9374851 6.2e-05 2_[+2]_70 chrV:6470259-6470339 7.8e-05 39_[+2]_33 chrX:4618062-4618142 9.5e-05 42_[+2]_30 chrI:6458769-6458849 9.5e-05 3_[+2]_69 chrI:1315573-1315653 0.00011 59_[+2]_13 chrV:4969024-4969104 0.00013 60_[+2]_12 chrI:12921053-12921133 0.00013 69_[+2]_3 chrIV:177643-177723 0.00015 70_[+2]_2 chrIV:12158106-12158186 0.00016 17_[+2]_55 chrIV:1895150-1895230 0.00016 35_[+2]_37 chrII:11890725-11890805 0.00016 70_[+2]_2 chrI:9904110-9904190 0.00016 43_[+2]_29 chrIV:13001394-13001474 0.00018 60_[+2]_12 chrIV:6988443-6988523 0.00023 36_[+2]_36 chrX:11765997-11766077 0.00023 49_[+2]_23 chrIII:7657067-7657147 0.00023 58_[+2]_14 chrI:11589073-11589153 0.00023 38_[+2]_34 chrIV:8068424-8068504 0.00023 66_[+2]_6 chrII:4577557-4577637 0.00025 57_[+2]_15 chrI:6280427-6280507 0.00026 20_[+2]_52 chrII:10784961-10785041 0.00029 37_[+2]_35 chrX:4972176-4972256 0.00033 18_[+2]_54 chrIII:8872165-8872245 0.00036 27_[+2]_45 chrIV:11867828-11867908 0.00037 51_[+2]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTBYGTCT width=8 seqs=36 chrIII:9661253-9661333 ( 29) CTGTGTCT 1 chrIV:17215247-17215327 ( 37) CTGTGTCT 1 chrV:1572763-1572843 ( 28) CTGTGTCT 1 chrI:6153598-6153678 ( 42) CTCTGTCT 1 chrIV:12685953-12686033 ( 41) CTCTGTCT 1 chrI:11664997-11665077 ( 44) CTGCGTCT 1 chrV:3688878-3688958 ( 50) CTGCGTCT 1 chrII:622685-622765 ( 2) CTGCGTCT 1 chrI:13528223-13528303 ( 39) CTGCGTCT 1 chrII:873138-873218 ( 66) CTGCGTCT 1 chrIII:1163025-1163105 ( 60) CTGCGTCT 1 chrV:3448067-3448147 ( 73) CTTTGTCT 1 chrI:9374771-9374851 ( 3) CTTTGTCT 1 chrV:6470259-6470339 ( 40) CTCCGTCT 1 chrX:4618062-4618142 ( 43) CTGTTTCT 1 chrI:6458769-6458849 ( 4) CTGTTTCT 1 chrI:1315573-1315653 ( 60) CTGTCTCT 1 chrV:4969024-4969104 ( 61) CTCTTTCT 1 chrI:12921053-12921133 ( 70) CTCTTTCT 1 chrIV:177643-177723 ( 71) CTTCGTCT 1 chrIV:12158106-12158186 ( 18) CTCTCTCT 1 chrIV:1895150-1895230 ( 36) CTCTCTCT 1 chrII:11890725-11890805 ( 71) CTCTCTCT 1 chrI:9904110-9904190 ( 44) CTCTCTCT 1 chrIV:13001394-13001474 ( 61) CTGCTTCT 1 chrIV:6988443-6988523 ( 37) GTGTGTCT 1 chrX:11765997-11766077 ( 50) CTTTTTCT 1 chrIII:7657067-7657147 ( 59) GTGTGTCT 1 chrI:11589073-11589153 ( 39) CTGCCTCT 1 chrIV:8068424-8068504 ( 67) CTTTTTCT 1 chrII:4577557-4577637 ( 58) CTCCTTCT 1 chrI:6280427-6280507 ( 21) CTTTCTCT 1 chrII:10784961-10785041 ( 38) GTCTGTCT 1 chrX:4972176-4972256 ( 19) CTTCTTCT 1 chrIII:8872165-8872245 ( 28) GTTTGTCT 1 chrIV:11867828-11867908 ( 52) GTCCGTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.389 E= 1.4e+004 -1181 181 -72 -1181 -1181 -1181 -1181 193 -1181 44 96 -24 -1181 56 -1181 128 -1181 -33 128 -7 -1181 -1181 -1181 193 -1181 203 -1181 -1181 -1181 -1181 -1181 193 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 36 E= 1.4e+004 0.000000 0.861111 0.138889 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.333333 0.444444 0.222222 0.000000 0.361111 0.000000 0.638889 0.000000 0.194444 0.555556 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTBYGTCT MEME-2 regular expression -------------------------------------------------------------------------------- CT[GCT][TC][GT]TCT -------------------------------------------------------------------------------- Time 9.85 secs. ******************************************************************************** ******************************************************************************** MOTIF RCAGVTGB MEME-3 width = 8 sites = 29 llr = 246 E-value = 2.2e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3:a:4::: pos.-specific C :a::2::3 probability G 7::a4:a4 matrix T :::::a:3 bits 2.1 * * * 1.9 *** ** 1.7 *** ** 1.5 *** ** Relative 1.3 *** ** Entropy 1.1 **** ** (12.2 bits) 0.9 **** ** 0.6 **** ** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCAGATGG consensus A G C sequence C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:6259217-6259297 46 1.07e-05 CAGGTGTTGA GCAGGTGG CAGTTATCGG chrIII:6929197-6929277 55 2.29e-05 TTTTTGAAGA GCAGATGG TGTTCTTCTC chrIV:11867828-11867908 6 2.29e-05 GCAGA GCAGATGG GAATGGTAGT chrII:1025889-1025969 53 2.29e-05 AAGCTAAACG GCAGATGG CCTAAGCCAC chrII:1061832-1061912 40 2.29e-05 AAGCTAAACG GCAGATGG CCTGAGCCAC chrI:5411437-5411517 69 2.29e-05 CATCTGGACA GCAGATGG AAAT chrI:6285407-6285487 3 2.29e-05 GG GCAGATGG TATTCTCGCT chrX:9697814-9697894 37 3.43e-05 CACTTCCGAG GCAGGTGC CTTTGTCCGG chrI:240360-240440 59 7.11e-05 CGAGCGCTCT GCAGGTGT CGTTTTCCTT chrII:2681827-2681907 40 7.11e-05 CAATGTGTGA GCAGCTGG TACCCTCGAA chrX:5243750-5243830 16 7.11e-05 TTAATTGAAT GCAGCTGG GCGGTCAGTT chrIII:3086631-3086711 67 7.11e-05 AGCAGCAGCA GCAGATGC CCCTCC chrII:5220046-5220126 66 7.11e-05 TGTGGATCCG GCAGGTGT ATGATTA chrI:3603317-3603397 29 8.52e-05 TCTCCAAATG GCAGATGT ACTCATTGCA chrIV:6998077-6998157 28 8.52e-05 CCATCTTACT GCAGATGT CCACAGGTGT chrI:2710910-2710990 70 9.75e-05 GTGCCCCTGG ACAGGTGG ACA chrII:1217290-1217370 11 9.75e-05 CCACCTGTCC ACAGGTGG TTAGAGAAGA chrX:13221515-13221595 20 1.10e-04 CGGCACAACA GCAGCTGC AAGGTCAACT chrI:10479134-10479214 51 1.10e-04 GGCATGAGAG GCAGCTGC GCGCGTTTTC chrI:9909024-9909104 38 1.24e-04 ACATCTGGCG ACAGATGG AGGGGTACTT chrI:13629000-13629080 19 1.37e-04 TGGACGTCCC GCAGCTGT CATTTCGCTC chrI:4786144-4786224 5 1.37e-04 TTCT GCAGCTGT CATACGGGGT chrI:1315573-1315653 29 1.50e-04 CACACAGGTG ACAGGTGC ATCCACATTC chrX:4609788-4609868 59 1.50e-04 CAGGCAGACA ACAGGTGC TGCACAATAG chrX:14486618-14486698 2 1.50e-04 A ACAGGTGC ACTTCTCACC chrII:12991346-12991426 69 1.50e-04 CATACTGTCA ACAGGTGC TCGA chrV:10038830-10038910 23 1.92e-04 CTTTGGAATC ACAGGTGT CAGCAAGCCG chrIV:7078832-7078912 19 2.08e-04 TCTCATAGTT ACAGATGT CAACAGATGT chrX:12183315-12183395 39 2.22e-04 CAGCTGGTCC ACAGCTGC CCAAAATTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:6259217-6259297 1.1e-05 45_[+3]_27 chrIII:6929197-6929277 2.3e-05 54_[+3]_18 chrIV:11867828-11867908 2.3e-05 5_[+3]_67 chrII:1025889-1025969 2.3e-05 52_[+3]_20 chrII:1061832-1061912 2.3e-05 39_[+3]_33 chrI:5411437-5411517 2.3e-05 68_[+3]_4 chrI:6285407-6285487 2.3e-05 2_[+3]_70 chrX:9697814-9697894 3.4e-05 36_[+3]_36 chrI:240360-240440 7.1e-05 58_[+3]_14 chrII:2681827-2681907 7.1e-05 39_[+3]_33 chrX:5243750-5243830 7.1e-05 15_[+3]_57 chrIII:3086631-3086711 7.1e-05 66_[+3]_6 chrII:5220046-5220126 7.1e-05 65_[+3]_7 chrI:3603317-3603397 8.5e-05 28_[+3]_44 chrIV:6998077-6998157 8.5e-05 27_[+3]_45 chrI:2710910-2710990 9.7e-05 69_[+3]_3 chrII:1217290-1217370 9.7e-05 10_[+3]_62 chrX:13221515-13221595 0.00011 19_[+3]_53 chrI:10479134-10479214 0.00011 50_[+3]_22 chrI:9909024-9909104 0.00012 37_[+3]_35 chrI:13629000-13629080 0.00014 18_[+3]_54 chrI:4786144-4786224 0.00014 4_[+3]_68 chrI:1315573-1315653 0.00015 28_[+3]_44 chrX:4609788-4609868 0.00015 58_[+3]_14 chrX:14486618-14486698 0.00015 1_[+3]_71 chrII:12991346-12991426 0.00015 68_[+3]_4 chrV:10038830-10038910 0.00019 22_[+3]_50 chrIV:7078832-7078912 0.00021 18_[+3]_54 chrX:12183315-12183395 0.00022 38_[+3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCAGVTGB width=8 seqs=29 chrX:6259217-6259297 ( 46) GCAGGTGG 1 chrIII:6929197-6929277 ( 55) GCAGATGG 1 chrIV:11867828-11867908 ( 6) GCAGATGG 1 chrII:1025889-1025969 ( 53) GCAGATGG 1 chrII:1061832-1061912 ( 40) GCAGATGG 1 chrI:5411437-5411517 ( 69) GCAGATGG 1 chrI:6285407-6285487 ( 3) GCAGATGG 1 chrX:9697814-9697894 ( 37) GCAGGTGC 1 chrI:240360-240440 ( 59) GCAGGTGT 1 chrII:2681827-2681907 ( 40) GCAGCTGG 1 chrX:5243750-5243830 ( 16) GCAGCTGG 1 chrIII:3086631-3086711 ( 67) GCAGATGC 1 chrII:5220046-5220126 ( 66) GCAGGTGT 1 chrI:3603317-3603397 ( 29) GCAGATGT 1 chrIV:6998077-6998157 ( 28) GCAGATGT 1 chrI:2710910-2710990 ( 70) ACAGGTGG 1 chrII:1217290-1217370 ( 11) ACAGGTGG 1 chrX:13221515-13221595 ( 20) GCAGCTGC 1 chrI:10479134-10479214 ( 51) GCAGCTGC 1 chrI:9909024-9909104 ( 38) ACAGATGG 1 chrI:13629000-13629080 ( 19) GCAGCTGT 1 chrI:4786144-4786224 ( 5) GCAGCTGT 1 chrI:1315573-1315653 ( 29) ACAGGTGC 1 chrX:4609788-4609868 ( 59) ACAGGTGC 1 chrX:14486618-14486698 ( 2) ACAGGTGC 1 chrII:12991346-12991426 ( 69) ACAGGTGC 1 chrV:10038830-10038910 ( 23) ACAGGTGT 1 chrIV:7078832-7078912 ( 19) ACAGATGT 1 chrX:12183315-12183395 ( 39) ACAGCTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.93691 E= 2.2e+001 39 -1150 152 -1150 -1150 203 -1150 -1150 193 -1150 -1150 -1150 -1150 -1150 213 -1150 53 -2 73 -1150 -1150 -1150 -1150 193 -1150 -1150 213 -1150 -1150 34 86 7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 29 E= 2.2e+001 0.344828 0.000000 0.655172 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.379310 0.241379 0.379310 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.310345 0.413793 0.275862 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCAGVTGB MEME-3 regular expression -------------------------------------------------------------------------------- [GA]CAG[AGC]TG[GCT] -------------------------------------------------------------------------------- Time 13.18 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTGGGGG MEME-4 width = 8 sites = 2 llr = 23 E-value = 3.5e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G aa:aaaaa matrix T ::a::::: bits 2.1 ** ***** 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (16.8 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGTGGGGG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:12549235-12549315 8 8.69e-06 GACGTTT GGTGGGGG AAGTTGTTGC chrX:14486618-14486698 62 8.69e-06 CATCTACAGA GGTGGGGG AAAATGTCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:12549235-12549315 8.7e-06 7_[+4]_65 chrX:14486618-14486698 8.7e-06 61_[+4]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTGGGGG width=8 seqs=2 chrIV:12549235-12549315 ( 8) GGTGGGGG 1 chrX:14486618-14486698 ( 62) GGTGGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 3.5e+004 -765 -765 212 -765 -765 -765 212 -765 -765 -765 -765 192 -765 -765 212 -765 -765 -765 212 -765 -765 -765 212 -765 -765 -765 212 -765 -765 -765 212 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 3.5e+004 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGGG MEME-4 regular expression -------------------------------------------------------------------------------- GGTGGGGG -------------------------------------------------------------------------------- Time 16.43 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAGGCAG MEME-5 width = 8 sites = 2 llr = 23 E-value = 2.6e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a:::a: pos.-specific C :a:::a:: probability G a::aa::a matrix T :::::::: bits 2.1 ** *** * 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (16.4 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCAGGCAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:4609788-4609868 48 1.14e-05 AATTGCCAGA GCAGGCAG ACAACAGGTG chrX:7469543-7469623 22 1.14e-05 CCATAGTGTT Gcaggcag ccaggtagcc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:4609788-4609868 1.1e-05 47_[+5]_25 chrX:7469543-7469623 1.1e-05 21_[+5]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAGGCAG width=8 seqs=2 chrX:4609788-4609868 ( 48) GCAGGCAG 1 chrX:7469543-7469623 ( 22) GCAGGCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.3073 E= 2.6e+005 -765 -765 212 -765 -765 202 -765 -765 192 -765 -765 -765 -765 -765 212 -765 -765 -765 212 -765 -765 202 -765 -765 192 -765 -765 -765 -765 -765 212 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.6e+005 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGGCAG MEME-5 regular expression -------------------------------------------------------------------------------- GCAGGCAG -------------------------------------------------------------------------------- Time 19.67 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:6998077-6998157 2.03e-03 27_[+3(8.52e-05)]_45 chrX:9697814-9697894 3.57e-04 36_[+3(3.43e-05)]_36 chrII:5220046-5220126 3.03e-03 65_[+3(7.11e-05)]_7 chrI:2845633-2845713 1.14e-01 80 chrV:13021695-13021775 1.80e-01 80 chrIV:12821481-12821561 1.89e-01 80 chrI:9909024-9909104 3.85e-04 80 chrII:4987416-4987496 2.74e-01 80 chrIV:13190222-13190302 2.95e-02 56_[+1(7.57e-05)]_16 chrV:13120235-13120315 1.29e-03 70_[+1(5.95e-05)]_2 chrI:14788750-14788830 1.40e-02 50_[+3(2.29e-05)]_22 chrV:14438499-14438579 5.61e-03 80 chrIII:1163025-1163105 1.47e-03 59_[+2(4.52e-05)]_13 chrI:6285407-6285487 4.99e-04 2_[+3(2.29e-05)]_50_[+1(1.51e-05)]_\ 12 chrV:13169303-13169383 8.13e-03 62_[+1(7.57e-05)]_10 chrI:5411437-5411517 5.07e-04 68_[+3(2.29e-05)]_4 chrX:7469543-7469623 4.99e-04 21_[+5(1.14e-05)]_18_[+1(8.79e-05)]_\ 25 chrII:9965904-9965984 1.52e-01 80 chrIII:4092194-4092274 5.76e-02 19_[+1(4.22e-05)]_53 chrII:4981867-4981947 4.02e-02 80 chrI:8281223-8281303 7.51e-01 80 chrIV:12552107-12552187 8.13e-03 80 chrX:2229466-2229546 9.97e-02 45_[+1(5.95e-05)]_27 chrIV:17206683-17206763 3.20e-02 80 chrIV:13001394-13001474 1.44e-02 80 chrX:7162933-7163013 1.59e-02 29_[+1(7.57e-05)]_43 chrI:14067500-14067580 1.47e-02 25_[+3(2.29e-05)]_47 chrII:12991346-12991426 8.82e-03 1_[+1(4.22e-05)]_71 chrII:1217290-1217370 1.49e-03 10_[+3(9.75e-05)]_62 chrI:9374087-9374167 4.34e-02 80 chrIII:869061-869141 3.89e-01 80 chrV:11953013-11953093 3.11e-04 23_[+5(7.54e-05)]_49 chrII:1061832-1061912 2.10e-02 39_[+3(2.29e-05)]_33 chrX:11673505-11673585 1.20e-01 80 chrI:9904110-9904190 3.50e-02 80 chrV:1572763-1572843 1.46e-01 27_[+2(1.51e-05)]_45 chrV:8356441-8356521 9.70e-02 80 chrIII:5120780-5120860 2.29e-01 80 chrII:12984838-12984918 1.10e-03 80 chrIII:12611590-12611670 1.32e-02 80 chrV:4506847-4506927 9.88e-01 80 chrX:10424877-10424957 3.68e-02 80 chrI:6724847-6724927 4.69e-03 28_[+3(2.29e-05)]_44 chrX:7209319-7209399 9.08e-03 3_[+1(4.22e-05)]_5_[+1(5.95e-05)]_\ 56 chrI:9910678-9910758 7.76e-02 80 chrX:1801151-1801231 3.19e-01 80 chrX:2231279-2231359 1.60e-02 52_[+1(8.79e-05)]_20 chrIV:4448469-4448549 3.51e-03 59_[+1(1.51e-05)]_13 chrX:2328160-2328240 5.52e-02 80 chrIV:14299099-14299179 4.46e-01 80 chrX:1069123-1069203 1.73e-03 70_[+3(2.29e-05)]_2 chrIII:5183521-5183601 2.51e-02 29_[+1(7.57e-05)]_43 chrII:4583353-4583433 7.37e-02 80 chrX:6259217-6259297 5.62e-04 45_[+3(1.07e-05)]_27 chrII:2092122-2092202 3.53e-04 7_[+4(3.30e-05)]_65 chrII:11568830-11568910 1.75e-02 80 chrII:3975063-3975143 9.69e-03 80 chrX:3320216-3320296 2.60e-01 80 chrIII:5720974-5721054 8.22e-03 62_[+1(7.57e-05)]_10 chrX:17409375-17409455 6.62e-02 80 chrIII:6605608-6605688 1.03e-02 80 chrIV:8055375-8055455 9.61e-01 80 chrII:11887912-11887992 9.13e-01 80 chrIII:4461467-4461547 5.90e-02 80 chrII:6936081-6936161 2.16e-03 23_[+1(1.51e-05)]_49 chrI:6458769-6458849 1.42e-03 3_[+2(9.48e-05)]_69 chrIII:3821267-3821347 1.45e-01 80 chrX:17150238-17150318 1.07e-01 48_[+1(5.95e-05)]_24 chrV:11947569-11947649 2.90e-01 80 chrII:4585445-4585525 3.20e-03 18_[+5(1.14e-05)]_54 chrV:3256974-3257054 1.59e-02 80 chrX:2473695-2473775 1.36e-01 80 chrII:10986852-10986932 7.91e-01 80 chrI:10479134-10479214 2.07e-02 80 chrII:9572064-9572144 1.19e-01 80 chrIV:17215247-17215327 7.30e-05 18_[+1(4.22e-05)]_10_[+2(1.51e-05)]_\ 36 chrII:9059166-9059246 3.06e-01 80 chrIV:8068424-8068504 9.10e-06 31_[+1(1.51e-05)]_41 chrI:4786144-4786224 1.11e-03 37_[+1(1.51e-05)]_35 chrI:2710910-2710990 1.25e-02 69_[+3(9.75e-05)]_3 chrII:11890725-11890805 2.76e-04 9_[+3(2.29e-05)]_63 chrIV:16380407-16380487 3.84e-03 80 chrII:1025889-1025969 9.83e-03 52_[+3(2.29e-05)]_20 chrIV:12540990-12541070 2.80e-01 80 chrII:7815619-7815699 3.38e-03 27_[+3(7.11e-05)]_45 chrX:2049037-2049117 2.25e-02 80 chrIV:565000-565080 2.04e-02 80 chrV:6684711-6684791 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chrII:2681827-2681907 1.53e-03 7_[+1(5.95e-05)]_24_[+3(7.11e-05)]_\ 33 chrX:10927287-10927367 3.59e-02 80 chrII:629927-630007 5.90e-02 24_[+1(5.95e-05)]_48 chrIV:11311649-11311729 9.23e-01 80 chrII:5988318-5988398 3.48e-02 80 chrX:4972176-4972256 1.05e-03 31_[+1(1.51e-05)]_41 chrI:9570551-9570631 2.39e-03 40_[+1(1.51e-05)]_32 chrI:2844330-2844410 3.55e-02 80 chrV:3209320-3209400 4.85e-02 80 chrV:6685670-6685750 3.39e-01 80 chrV:9767805-9767885 1.00e-01 80 chrIII:7657067-7657147 3.14e-01 80 chrV:6681668-6681748 6.00e-04 61_[+5(7.54e-05)]_11 chrX:7560296-7560376 3.19e-01 80 chrX:7223127-7223207 1.02e-04 55_[+5(7.54e-05)]_[+3(9.75e-05)]_9 chrIV:3849047-3849127 7.23e-02 80 chrII:10554185-10554265 6.48e-03 50_[+3(9.75e-05)]_22 chrI:6154958-6155038 1.03e-02 80 chrX:10556893-10556973 5.02e-03 80 chrII:7809652-7809732 1.26e-02 80 chrII:873138-873218 3.30e-02 57_[+2(9.48e-05)]_[+2(4.52e-05)]_7 chrX:9435464-9435544 7.81e-03 6_[+3(9.75e-05)]_66 chrX:16988538-16988618 3.65e-03 80 chrV:14428443-14428523 2.43e-03 62_[+2(9.48e-05)]_10 chrV:12207759-12207839 8.94e-03 31_[+5(7.54e-05)]_41 chrV:6470259-6470339 2.48e-04 39_[+2(7.75e-05)]_33 chrIII:12894378-12894458 1.98e-02 49_[+3(9.75e-05)]_23 chrIV:16410225-16410305 2.30e-01 80 chrX:13881888-13881968 6.66e-03 80 chrIII:6929197-6929277 1.44e-03 54_[+3(2.29e-05)]_18 chrIV:12685953-12686033 2.36e-03 40_[+2(3.12e-05)]_32 chrI:9524339-9524419 9.85e-01 80 chrI:3603317-3603397 1.08e-02 28_[+3(8.52e-05)]_44 chrII:2137365-2137445 1.36e-02 7_[+3(2.29e-05)]_65 chrIII:12233581-12233661 1.00e+00 80 chrI:124823-124903 5.71e-03 44_[+1(4.22e-05)]_28 chrI:3338412-3338492 8.26e-03 41_[+1(4.22e-05)]_31 chrIV:1361930-1362010 9.14e-03 80 chrIV:177643-177723 6.61e-02 80 chrX:12183315-12183395 2.22e-02 27_[+1(4.22e-05)]_45 chrX:14486618-14486698 8.55e-05 61_[+4(8.69e-06)]_11 chrV:2623836-2623916 1.00e+00 80 chrV:5707136-5707216 7.85e-01 80 chrX:13221515-13221595 1.24e-03 54_[+1(4.22e-05)]_18 chrII:13845316-13845396 5.35e-02 80 chrII:10784961-10785041 1.30e-03 80 chrII:3310124-3310204 9.63e-02 80 chrX:4609788-4609868 3.77e-04 10_[+3(8.52e-05)]_29_[+5(1.14e-05)]_\ 25 chrIV:1904210-1904290 7.97e-03 25_[+4(8.69e-06)]_47 chrI:13528223-13528303 2.53e-03 10_[+1(5.95e-05)]_20_[+2(4.52e-05)]_\ 34 chrI:11208173-11208253 3.31e-02 47_[+1(5.95e-05)]_25 chrX:4125325-4125405 1.10e-01 80 chrII:4640941-4641021 4.28e-03 34_[+3(2.29e-05)]_38 chrX:12854320-12854400 2.93e-02 24_[+1(7.57e-05)]_48 chrX:12689612-12689692 2.56e-02 59_[+1(5.95e-05)]_13 chrX:12092736-12092816 7.12e-02 80 chrIV:9264019-9264099 1.38e-03 80 chrX:4618062-4618142 2.87e-02 42_[+2(9.48e-05)]_30 chrI:9903271-9903351 3.90e-02 34_[+3(8.52e-05)]_38 chrI:12921053-12921133 2.01e-03 80 chrIV:5860975-5861055 9.70e-01 80 chrV:4969024-4969104 3.13e-03 80 chrV:6683477-6683557 1.84e-01 80 chrX:2238336-2238416 9.15e-01 80 chrII:622685-622765 6.49e-04 1_[+2(4.52e-05)]_55_[+3(9.75e-05)]_\ 8 chrX:7967994-7968074 1.20e-01 80 chrII:11077148-11077228 6.13e-03 31_[+4(3.30e-05)]_41 chrX:6258554-6258634 2.14e-01 80 chrX:11765997-11766077 8.87e-02 80 chrIII:11141771-11141851 1.51e-04 46_[+1(1.51e-05)]_26 chrX:9067386-9067466 2.70e-02 80 chrX:12188799-12188879 1.96e-03 61_[+1(7.57e-05)]_11 chrI:4703334-4703414 2.40e-03 19_[+3(2.29e-05)]_53 chrI:13409902-13409982 7.97e-01 80 chrIV:12549235-12549315 8.21e-04 7_[+4(8.69e-06)]_65 chrV:12206132-12206212 3.22e-01 80 chrI:9374771-9374851 5.68e-02 2_[+2(6.25e-05)]_70 chrX:11210603-11210683 2.94e-02 80 chrV:10038830-10038910 8.41e-03 55_[+3(7.11e-05)]_17 chrI:1315573-1315653 9.80e-04 80 chrIV:9770839-9770919 6.91e-02 18_[+1(5.95e-05)]_54 chrIV:563166-563246 1.15e-01 80 chrV:13018330-13018410 2.99e-01 80 chrI:3959623-3959703 2.87e-02 80 chrII:10652213-10652293 8.83e-01 80 chrIV:10421461-10421541 1.63e-01 80 chrII:4577557-4577637 1.01e-01 80 chrI:762891-762971 2.44e-02 28_[+5(1.14e-05)]_44 chrII:3957476-3957556 4.23e-01 80 chrV:3448067-3448147 3.00e-03 72_[+2(6.25e-05)] chrII:5933247-5933327 1.53e-01 80 chrII:937431-937511 8.39e-02 23_[+1(5.95e-05)]_49 chrX:12172636-12172716 1.15e-01 80 chrII:14248411-14248491 1.00e-03 49_[+1(1.51e-05)]_23 chrV:3612575-3612655 3.98e-01 80 chrIII:9768047-9768127 3.02e-01 80 chrX:11211528-11211608 3.20e-02 20_[+1(4.22e-05)]_52 chrI:14962370-14962450 5.12e-01 80 chrIV:1886626-1886706 2.70e-01 80 chrX:8390286-8390366 9.10e-01 80 chrX:6686818-6686898 4.09e-03 54_[+3(2.29e-05)]_18 chrI:3101909-3101989 1.29e-02 80 chrV:3688878-3688958 6.35e-04 2_[+1(7.57e-05)]_39_[+2(4.52e-05)]_\ 23 chrI:240360-240440 7.67e-03 58_[+3(7.11e-05)]_14 chrV:18808743-18808823 4.86e-03 30_[+3(2.29e-05)]_42 chrIII:5501510-5501590 9.91e-02 80 chrII:5418575-5418655 3.97e-02 80 chrII:7813488-7813568 1.32e-02 33_[+1(7.57e-05)]_39 chrIV:5093559-5093639 2.26e-02 80 chrX:13519176-13519256 9.82e-04 39_[+1(4.22e-05)]_33 chrIII:9230219-9230299 9.20e-04 69_[+3(8.52e-05)]_3 chrV:1580598-1580678 9.70e-01 80 chrIII:12713939-12714019 1.53e-01 80 chrV:16838834-16838914 2.39e-01 80 chrIV:12158106-12158186 2.16e-01 80 chrI:11203269-11203349 1.64e-03 2_[+1(5.95e-05)]_70 chrI:6153598-6153678 7.59e-03 33_[+2(4.52e-05)]_[+2(3.12e-05)]_31 chrII:11889525-11889605 2.24e-01 80 chrIII:9661253-9661333 8.23e-05 17_[+2(1.51e-05)]_3_[+2(1.51e-05)]_\ 44 chrI:6280427-6280507 1.83e-02 80 chrX:2230024-2230104 5.89e-01 80 chrIV:7455039-7455119 3.64e-01 80 chrIII:5497843-5497923 9.68e-01 80 chrV:18710307-18710387 1.60e-02 80 chrIV:5964828-5964908 3.00e-01 80 chrI:9788063-9788143 4.18e-01 80 chrX:7965620-7965700 5.70e-01 80 chrV:9546268-9546348 2.18e-02 44_[+1(5.95e-05)]_28 chrX:2218977-2219057 6.01e-01 80 chrIII:4455192-4455272 2.98e-01 80 chrII:11886003-11886083 1.86e-01 80 chrIII:4519609-4519689 9.13e-02 80 chrX:14504236-14504316 1.44e-02 80 chrIV:6988443-6988523 1.10e-03 80 chrIV:7078832-7078912 1.95e-02 18_[+1(7.57e-05)]_2_[+1(7.57e-05)]_\ 44 chrI:4299576-4299656 1.18e-01 80 chrI:11664997-11665077 2.94e-02 43_[+2(4.52e-05)]_29 chrV:19127249-19127329 1.53e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n02.farnam.hpc.yale.internal ********************************************************************************