******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/hlh-4.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:12022655-12022735 1.0000 80 chrIV:3482719-3482799 1.0000 80 chrV:10276197-10276277 1.0000 80 chrV:11201985-11202065 1.0000 80 chrX:7886344-7886424 1.0000 80 chrV:17030589-17030669 1.0000 80 chrV:9049430-9049510 1.0000 80 chrIV:15687984-15688064 1.0000 80 chrIV:592541-592621 1.0000 80 chrV:4707805-4707885 1.0000 80 chrV:7501353-7501433 1.0000 80 chrIV:6200408-6200488 1.0000 80 chrII:9279175-9279255 1.0000 80 chrX:5836686-5836766 1.0000 80 chrIV:3453505-3453585 1.0000 80 chrV:16497663-16497743 1.0000 80 chrII:8610744-8610824 1.0000 80 chrII:8554727-8554807 1.0000 80 chrV:15850571-15850651 1.0000 80 chrV:215856-215936 1.0000 80 chrV:11014917-11014997 1.0000 80 chrII:8722114-8722194 1.0000 80 chrII:9139331-9139411 1.0000 80 chrV:17182247-17182327 1.0000 80 chrV:3176211-3176291 1.0000 80 chrV:6003606-6003686 1.0000 80 chrV:15400241-15400321 1.0000 80 chrIV:6058783-6058863 1.0000 80 chrV:16388361-16388441 1.0000 80 chrI:7641696-7641776 1.0000 80 chrIV:14536066-14536146 1.0000 80 chrX:1267542-1267622 1.0000 80 chrV:8978706-8978786 1.0000 80 chrIV:7353730-7353810 1.0000 80 chrX:4562438-4562518 1.0000 80 chrV:13804907-13804987 1.0000 80 chrV:2814002-2814082 1.0000 80 chrV:10063809-10063889 1.0000 80 chrX:13814041-13814121 1.0000 80 chrX:10919640-10919720 1.0000 80 chrV:17396689-17396769 1.0000 80 chrIV:16287879-16287959 1.0000 80 chrV:342557-342637 1.0000 80 chrII:4851090-4851170 1.0000 80 chrII:2700366-2700446 1.0000 80 chrV:15849691-15849771 1.0000 80 chrIV:3471476-3471556 1.0000 80 chrIV:11893794-11893874 1.0000 80 chrX:3894171-3894251 1.0000 80 chrX:4628487-4628567 1.0000 80 chrX:16470681-16470761 1.0000 80 chrII:5776424-5776504 1.0000 80 chrV:17543247-17543327 1.0000 80 chrV:10259404-10259484 1.0000 80 chrV:11458039-11458119 1.0000 80 chrV:9053509-9053589 1.0000 80 chrV:16350200-16350280 1.0000 80 chrV:8299515-8299595 1.0000 80 chrV:12719871-12719951 1.0000 80 chrII:7982277-7982357 1.0000 80 chrX:994811-994891 1.0000 80 chrIII:9370954-9371034 1.0000 80 chrII:10150686-10150766 1.0000 80 chrV:4240406-4240486 1.0000 80 chrV:16169248-16169328 1.0000 80 chrV:13185540-13185620 1.0000 80 chrV:10998431-10998511 1.0000 80 chrIII:2069390-2069470 1.0000 80 chrV:7477024-7477104 1.0000 80 chrIV:8682023-8682103 1.0000 80 chrV:6288171-6288251 1.0000 80 chrIII:5361062-5361142 1.0000 80 chrV:19329559-19329639 1.0000 80 chrV:12433922-12434002 1.0000 80 chrV:20642046-20642126 1.0000 80 chrV:12031162-12031242 1.0000 80 chrV:19583803-19583883 1.0000 80 chrIV:8681011-8681091 1.0000 80 chrV:17452609-17452689 1.0000 80 chrIII:9478976-9479056 1.0000 80 chrII:7709661-7709741 1.0000 80 chrV:9703035-9703115 1.0000 80 chrV:8263780-8263860 1.0000 80 chrII:3514796-3514876 1.0000 80 chrII:5138309-5138389 1.0000 80 chrII:3706504-3706584 1.0000 80 chrX:4561611-4561691 1.0000 80 chrV:15162856-15162936 1.0000 80 chrV:20775566-20775646 1.0000 80 chrII:12387646-12387726 1.0000 80 chrIII:6264027-6264107 1.0000 80 chrV:20351227-20351307 1.0000 80 chrII:8396577-8396657 1.0000 80 chrV:15309150-15309230 1.0000 80 chrV:13427337-13427417 1.0000 80 chrV:4002612-4002692 1.0000 80 chrV:8397676-8397756 1.0000 80 chrV:15841231-15841311 1.0000 80 chrV:15721590-15721670 1.0000 80 chrV:10349075-10349155 1.0000 80 chrV:11033388-11033468 1.0000 80 chrV:10710492-10710572 1.0000 80 chrV:18827533-18827613 1.0000 80 chrX:4625239-4625319 1.0000 80 chrII:1293865-1293945 1.0000 80 chrV:20354146-20354226 1.0000 80 chrII:5775699-5775779 1.0000 80 chrII:6216782-6216862 1.0000 80 chrIV:12918362-12918442 1.0000 80 chrV:6778613-6778693 1.0000 80 chrIV:4288426-4288506 1.0000 80 chrV:4871855-4871935 1.0000 80 chrX:7888756-7888836 1.0000 80 chrIV:10206130-10206210 1.0000 80 chrIV:7296933-7297013 1.0000 80 chrIV:4620708-4620788 1.0000 80 chrIV:7550602-7550682 1.0000 80 chrII:14834755-14834835 1.0000 80 chrV:17178666-17178746 1.0000 80 chrX:12206710-12206790 1.0000 80 chrIV:7532535-7532615 1.0000 80 chrI:3014661-3014741 1.0000 80 chrII:9146263-9146343 1.0000 80 chrI:9443487-9443567 1.0000 80 chrIII:6610833-6610913 1.0000 80 chrV:9897084-9897164 1.0000 80 chrIV:2972135-2972215 1.0000 80 chrII:12969636-12969716 1.0000 80 chrII:8713421-8713501 1.0000 80 chrII:7924252-7924332 1.0000 80 chrV:18473570-18473650 1.0000 80 chrX:12951350-12951430 1.0000 80 chrV:8082343-8082423 1.0000 80 chrIV:3493470-3493550 1.0000 80 chrV:4062484-4062564 1.0000 80 chrII:12418166-12418246 1.0000 80 chrV:17450679-17450759 1.0000 80 chrIV:15906242-15906322 1.0000 80 chrII:12386898-12386978 1.0000 80 chrI:11684427-11684507 1.0000 80 chrIV:10912456-10912536 1.0000 80 chrII:9759224-9759304 1.0000 80 chrX:7447490-7447570 1.0000 80 chrV:9051679-9051759 1.0000 80 chrIV:15908412-15908492 1.0000 80 chrV:14210994-14211074 1.0000 80 chrV:17448218-17448298 1.0000 80 chrI:12620665-12620745 1.0000 80 chrX:4902542-4902622 1.0000 80 chrII:12469870-12469950 1.0000 80 chrX:15666619-15666699 1.0000 80 chrV:17188676-17188756 1.0000 80 chrV:16193198-16193278 1.0000 80 chrIV:8685976-8686056 1.0000 80 chrIV:6511912-6511992 1.0000 80 chrX:13347396-13347476 1.0000 80 chrV:15847346-15847426 1.0000 80 chrIV:8046608-8046688 1.0000 80 chrI:7347581-7347661 1.0000 80 chrIV:8179172-8179252 1.0000 80 chrIV:7301652-7301732 1.0000 80 chrX:14930389-14930469 1.0000 80 chrV:9358937-9359017 1.0000 80 chrV:9901299-9901379 1.0000 80 chrX:8582933-8583013 1.0000 80 chrX:11375729-11375809 1.0000 80 chrX:14794556-14794636 1.0000 80 chrII:2579634-2579714 1.0000 80 chrI:4873037-4873117 1.0000 80 chrIV:15814720-15814800 1.0000 80 chrIII:9739007-9739087 1.0000 80 chrX:11875434-11875514 1.0000 80 chrII:13722618-13722698 1.0000 80 chrV:2816020-2816100 1.0000 80 chrIV:3917007-3917087 1.0000 80 chrII:10132951-10133031 1.0000 80 chrIV:6199144-6199224 1.0000 80 chrX:980799-980879 1.0000 80 chrV:6780825-6780905 1.0000 80 chrI:13006392-13006472 1.0000 80 chrII:6027993-6028073 1.0000 80 chrII:9952000-9952080 1.0000 80 chrIV:10890239-10890319 1.0000 80 chrV:17192424-17192504 1.0000 80 chrIV:3259093-3259173 1.0000 80 chrV:10873791-10873871 1.0000 80 chrIII:2061955-2062035 1.0000 80 chrIV:11892714-11892794 1.0000 80 chrV:5708313-5708393 1.0000 80 chrV:618073-618153 1.0000 80 chrV:18709025-18709105 1.0000 80 chrIV:1977885-1977965 1.0000 80 chrV:7386295-7386375 1.0000 80 chrI:7406091-7406171 1.0000 80 chrV:11022282-11022362 1.0000 80 chrV:10465669-10465749 1.0000 80 chrX:2252573-2252653 1.0000 80 chrI:13008294-13008374 1.0000 80 chrV:17016901-17016981 1.0000 80 chrV:14380311-14380391 1.0000 80 chrIII:180206-180286 1.0000 80 chrIV:9053531-9053611 1.0000 80 chrX:10568053-10568133 1.0000 80 chrX:10685617-10685697 1.0000 80 chrII:8191454-8191534 1.0000 80 chrIV:10893988-10894068 1.0000 80 chrII:10852800-10852880 1.0000 80 chrV:4794446-4794526 1.0000 80 chrX:5387851-5387931 1.0000 80 chrI:4200366-4200446 1.0000 80 chrV:2813262-2813342 1.0000 80 chrIV:5102092-5102172 1.0000 80 chrII:8058042-8058122 1.0000 80 chrX:15350410-15350490 1.0000 80 chrIV:5580747-5580827 1.0000 80 chrI:10756798-10756878 1.0000 80 chrIV:3772014-3772094 1.0000 80 chrIV:6284866-6284946 1.0000 80 chrX:8440520-8440600 1.0000 80 chrX:5927207-5927287 1.0000 80 chrV:15858442-15858522 1.0000 80 chrV:8170456-8170536 1.0000 80 chrV:13366604-13366684 1.0000 80 chrI:13034453-13034533 1.0000 80 chrII:10730843-10730923 1.0000 80 chrV:4283843-4283923 1.0000 80 chrX:1830178-1830258 1.0000 80 chrV:6857209-6857289 1.0000 80 chrV:13338826-13338906 1.0000 80 chrI:40195-40275 1.0000 80 chrIV:6403558-6403638 1.0000 80 chrX:4563286-4563366 1.0000 80 chrI:14973378-14973458 1.0000 80 chrIV:3361733-3361813 1.0000 80 chrII:6313574-6313654 1.0000 80 chrV:4870781-4870861 1.0000 80 chrIV:4036787-4036867 1.0000 80 chrV:13094545-13094625 1.0000 80 chrII:10154439-10154519 1.0000 80 chrI:12613508-12613588 1.0000 80 chrI:7285222-7285302 1.0000 80 chrIV:14622204-14622284 1.0000 80 chrV:4867725-4867805 1.0000 80 chrIII:9365864-9365944 1.0000 80 chrI:2273951-2274031 1.0000 80 chrV:666661-666741 1.0000 80 chrI:469889-469969 1.0000 80 chrIV:16415751-16415831 1.0000 80 chrII:4885045-4885125 1.0000 80 chrII:12387845-12387925 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_hlh-4/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/hlh-4.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.311 C 0.184 G 0.178 T 0.327 Background letter frequencies (from file dataset with add-one prior applied): A 0.311 C 0.184 G 0.178 T 0.327 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF WDCASSTG MEME-1 width = 8 sites = 192 llr = 1461 E-value = 1.2e-194 ******************************************************************************** -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 42:a:::: pos.-specific C :1a:46:: probability G 13::64:a matrix T 43::1:a: bits 2.5 * * 2.2 * * 2.0 * * 1.7 ** * Relative 1.5 ** ** Entropy 1.2 ****** (11.0 bits) 1.0 ****** 0.7 ****** 0.5 ****** 0.2 ******** 0.0 -------- Multilevel TTCAGCTG consensus AG CG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:10912456-10912536 64 6.35e-06 CAACTGCAAT TGCAGCTG TTTCTGCAA chrV:20354146-20354226 17 6.35e-06 AATTTTATAT TGCAGCTG CAAATATCGC chrV:10276197-10276277 35 6.35e-06 GTTTTGAGAA TGCAGCTG GATTTTCATT chrI:12613508-12613588 5 1.24e-05 AGAG AGCAGCTG CAATGAGTAG chrV:14380311-14380391 33 1.24e-05 AACATCAATG AGCAGCTG AAGTTGAGCA chrX:13347396-13347476 5 1.24e-05 CATC AGCAGCTG AGCAAGTGAT chrV:16193198-16193278 50 1.24e-05 CCAATATCCA AGCAGCTG AAATTTGTAG chrV:14210994-14211074 33 1.24e-05 ATTCAAAGAA AGCAGCTG AAATCATTCA chrII:12386898-12386978 24 1.24e-05 ATCAACAAAA AGCAGCTG GATATTGGAA chrV:17178666-17178746 28 1.24e-05 GGCAGTAATC AGCAGCTG AAAAATGTAC chrII:1293865-1293945 36 1.24e-05 TTTCTTCGAA AGCAGCTG AATTTGAAAT chrIV:14536066-14536146 49 1.24e-05 AAATTTAAAA AGCAGCTG AAAATTACCG chrV:11022282-11022362 37 2.51e-05 CAACATGTTT TGCAGGTG ATATATTTGT chrIV:3917007-3917087 8 2.51e-05 TTTTTGA TGCAGGTG AAATTTATGC chrIV:8179172-8179252 58 2.51e-05 TTACCTTTTT TGCAGGTG TTTCTGGTCA chrII:12418166-12418246 26 2.51e-05 CGACAAAAAT TGCACCTG TCCATGATGT chrIV:3493470-3493550 70 2.51e-05 GTGACGTTGT TGCAGGTG AAG chrV:8082343-8082423 28 2.51e-05 GGAGTGATGT TGCAGGTG ATTCTCGATA chrX:12951350-12951430 46 2.51e-05 AGGGTATATT TGCAGGTG AAACGGATAC chrV:9897084-9897164 52 2.51e-05 TACTGACAAA TGCAGGTG TTTTTTATCC chrV:20351227-20351307 22 2.51e-05 TACCTCTAAA TGCACCTG TTCTTATACA chrV:17452609-17452689 2 2.51e-05 A TGCACCTG CAGTCAATAT chrIV:8682023-8682103 21 2.51e-05 TCTGAAATAT TGCACCTG TCTTCTGTAT chrX:16470681-16470761 56 2.51e-05 TCTCTAAGAA TGCAGGTG ATTTTTTTTT chrX:4628487-4628567 4 2.51e-05 ACT TGCACCTG CAATCTCACA chrV:8978706-8978786 20 2.51e-05 TCATAAGAAT TGCAGGTG TTTTTAAAGC chrV:17182247-17182327 33 2.51e-05 CTACACAAAA TGCACCTG CTGTAAATAT chrV:11014917-11014997 25 2.51e-05 AAAACCAACT TGCAGGTG CTTTTTGTAC chrIV:592541-592621 15 2.51e-05 TTCTCAATTT TGCAGGTG AATTTTACGT chrII:12387845-12387925 43 4.88e-05 TTTTTAACCG AGCAGGTG AAATATTTCC chrIII:9365864-9365944 68 4.88e-05 GAGAAGGAGA AGCAGGTG GAATT chrV:13094545-13094625 37 4.88e-05 CATAAGGTTC AGCAGGTG AACTTATAAA chrI:40195-40275 38 4.88e-05 CTGCAGAATC AGCAGGTG GCAACTTGGT chrV:13366604-13366684 37 4.88e-05 AGAAAAAAAA TTCAGCTG CAGTTATGTC chrIV:3772014-3772094 42 4.88e-05 TTCCAGCAGC AGCACCTG TCTTTCGAGA chrIV:5102092-5102172 3 4.88e-05 AA AGCACCTG GATTATTTGT chrX:5387851-5387931 16 4.88e-05 CAGCATTGCA AGCAGGTG ATACTCTTCA chrI:13008294-13008374 5 4.88e-05 ATTG AGCAGGTG AAGTTGAAGT chrV:618073-618153 45 4.88e-05 TTAGAATGTA AGCAGGTG ATATTATAGC chrX:11875434-11875514 23 4.88e-05 GACGTTTAGA TTCAGCTG ATCTTTTCAT chrIV:8046608-8046688 20 4.88e-05 ACTCCCAGAC TTCAGCTG TCAATTTTAT chrX:4902542-4902622 14 4.88e-05 ATACAAACTT TTCAGCTG GAAAGATAAA chrI:12620665-12620745 52 4.88e-05 AATTCAGATT TTCAGCTG CCACATAACT chrIV:15908412-15908492 59 4.88e-05 TTTCCTAGAA AGCAGGTG AACCGGACCT chrIV:2972135-2972215 38 4.88e-05 ATATCAAAAT TTCAGCTG TTCGGAGAAC chrII:9146263-9146343 48 4.88e-05 ACCAAGACGT AGCAGGTG AAAAGTAAGT chrIV:7296933-7297013 25 4.88e-05 GTATAGCAAA TTCAGCTG TTTTTAATAA chrV:15841231-15841311 20 4.88e-05 GATAGAAAAG AGCAGGTG AACTTTTTGC chrV:9703035-9703115 52 4.88e-05 AATTTCAGAT TTCAGCTG AAAAAAGTAT chrX:3894171-3894251 24 4.88e-05 TTGATTTTAT AGCAGGTG AACCTCCTCC chrII:2700366-2700446 20 4.88e-05 ATATGCCTAT AGCAGGTG ATATTTGGGT chrV:3176211-3176291 62 4.88e-05 GATAGAAATA TTCAGCTG TTGCAATTTT chrII:8722114-8722194 59 4.88e-05 TCACTGTAAT TTCAGCTG CTCGTTACCG chrV:15850571-15850651 51 4.88e-05 AGAAAAGAAG AGCAGGTG AAATTTAAAG chrX:5836686-5836766 38 4.88e-05 TTTCTTAGAA TTCAGCTG TGCGCGTTTC chrV:17030589-17030669 7 4.88e-05 TTAGAT TTCAGCTG TCAGCATGTT chrIV:7550602-7550682 39 5.99e-05 TACTGAATTT ATCAGCTG TCAGTCTTAT chrIV:11892714-11892794 73 7.45e-05 TTAGAAATCT GGCAGCTG chrV:8263780-8263860 35 7.45e-05 AGGAGATATT GGCAGCTG CAATTTCAGA chrV:342557-342637 70 7.45e-05 TCACTGATTT TACAGCTG CTT chrV:6003606-6003686 27 7.45e-05 TCATCTGCTG GGCAGCTG TAAAACGTCT chrIV:14622204-14622284 37 9.14e-05 ACCTTGACCT AACAGCTG CATGAGAAGA chrV:2813262-2813342 28 9.14e-05 ATACCAGGAA AACAGCTG GAAACTGACA chrV:10873791-10873871 45 9.14e-05 GGAAACAAAA AACAGCTG CAAGCTTATA chrV:9358937-9359017 37 9.14e-05 AAATGAAAGA AACAGCTG AAAACCTAAG chrII:7924252-7924332 59 9.14e-05 TTTCTAGAGA AACAGCTG AAATTTCGGG chrII:5775699-5775779 51 9.14e-05 AATTCTACTG AACAGCTG AAATTGTCTG chrV:7477024-7477104 25 9.14e-05 AGAAAATGAG AACAGCTG TAAATAGAAA chrIV:11893794-11893874 49 9.14e-05 GTCTGCATTT TGCACGTG GGATTTTCCG chrV:13804907-13804987 31 9.14e-05 AACTACGTGC AACAGCTG AACGTAGTAT chrII:10154439-10154519 35 1.21e-04 TTTACAGCAT TTCACCTG CCTCTGTGGA chrV:4283843-4283923 35 1.21e-04 TTAACACATT TTCACCTG TAAACCTGCA chrI:10756798-10756878 71 1.21e-04 CAGAAACAAT TTCACCTG GA chrIII:180206-180286 4 1.21e-04 ACT TTCACCTG TTTCACTTTC chrII:13722618-13722698 17 1.21e-04 TGTAATTATT TTCACCTG TTCTGAAAAC chrII:2579634-2579714 11 1.21e-04 GGTCTACTTT TTCACCTG CCATTGTGAA chrV:17448218-17448298 49 1.21e-04 CCGAATTTAT TTCACCTG CTGTAAATAT chrII:12969636-12969716 22 1.21e-04 TGCTCTTAAT TTCACCTG CTCCACTTGT chrIII:6610833-6610913 39 1.21e-04 CATATTTAGC TTCACCTG AGTTCATCTC chrIV:7532535-7532615 53 1.21e-04 CAAACTTATT TTCACCTG TCTCTTCGTC chrII:6216782-6216862 31 1.21e-04 GTTTTCATTA TTCACCTG CTACAAACCT chrV:18827533-18827613 10 1.21e-04 GCCCTTATT TTCACCTG GTTTCATCAG chrV:8397676-8397756 51 1.21e-04 AATTCAAATT TTCACCTG TTGATGTAGA chrV:4002612-4002692 51 1.21e-04 CTCCTGCTGA TTCACCTG CAATAATTGG chrII:5138309-5138389 35 1.21e-04 GAAATTTAAA TTCACCTG TCCTTTTCCC chrII:3514796-3514876 26 1.21e-04 GGTTAAAATT TTCACCTG CCCTTTTTCC chrII:7709661-7709741 51 1.21e-04 AAAAAACGAA TTCACCTG TCACAGCAAA chrV:12031162-12031242 62 1.21e-04 CACGAAAAAT TTCACCTG CGCTTAAATT chrV:12433922-12434002 2 1.21e-04 A TTCACCTG CCTTTTGATA chrV:6288171-6288251 28 1.21e-04 AGTTTTTCGA TTCAGGTG ATCAATTTTA chrV:10998431-10998511 29 1.21e-04 TTGAGTTTTT TTCACCTG CCGATAGAAT chrIII:9370954-9371034 54 1.21e-04 TAAACTTCTC TTCACCTG CACAATCATA chrIV:6058783-6058863 48 1.21e-04 ATCCAAATTA TTCACCTG TGTGAATTCC chrII:9139331-9139411 48 1.21e-04 CGTATCTGTT TTCACCTG AATTCCATAG chrV:215856-215936 24 1.21e-04 TTGAGTTTTT TTCACCTG TTCTTCTTAT chrV:16497663-16497743 42 1.21e-04 TTATGTTTTT TTCACCTG GTAAGCATCT chrV:11201985-11202065 60 1.21e-04 CAACTGTATT TTCACCTG TTCACTCCCT chrV:6857209-6857289 65 1.43e-04 GAACTCATGT ATCACCTG CATAAACG chrIV:6284866-6284946 11 1.43e-04 TCCTCCGGAA ATCACCTG CCACTGGAAA chrI:4200366-4200446 17 1.43e-04 TCCGAGCATT ATCACCTG TCGTGAGTTT chrIV:15814720-15814800 48 1.43e-04 AATAAGTCTT ATCACCTG CTTGTCACTT chrV:17188676-17188756 64 1.43e-04 CACTGATAAA ATCACCTG TTTTTGGAG chrV:11033388-11033468 73 1.43e-04 ATACGAATGT ATCACCTG chrV:20775566-20775646 72 1.43e-04 AGTATATGAA ATCACCTG T chrII:3706504-3706584 44 1.43e-04 TGACACTTTG ATCACCTG CCTGGTATCT chrV:4240406-4240486 53 1.43e-04 CCCAAGAAAA ATCACCTG TTCCAAGAAA chrV:16350200-16350280 65 1.43e-04 TTTTTTGAAA ATCACCTG TGTGTCTG chrIV:3471476-3471556 41 1.43e-04 TTCTGTCAGA ATCAGGTG AAAATTTTCA chrV:10063809-10063889 31 1.43e-04 ATGCAGAAGA ATCACCTG TCTTTTTCAC chrX:4562438-4562518 42 1.43e-04 TAGGGTTAAA ATCACCTG CTTTGTTGAC chrII:8554727-8554807 11 1.43e-04 GCACATTTTT ATCACCTG TTTTTTACTC chrIV:3453505-3453585 31 1.43e-04 ATGCAAATCT ATCACCTG TTCTCAGAAA chrIV:3482719-3482799 20 1.43e-04 AGAAAAAAAA ATCACCTG TCTTCCAAGA chrX:12022655-12022735 18 1.43e-04 TTCAACATAT ATCACCTG TAATAATTTC chrX:10568053-10568133 69 1.79e-04 TTTCCTAGCC GGCAGGTG TATC chrV:7386295-7386375 24 1.79e-04 CAAATGATCA GGCAGGTG ATTTCGCAAT chrII:12469870-12469950 65 1.79e-04 TAACTATAGT GGCAGGTG AAATGTTA chrV:17450679-17450759 64 1.79e-04 CTACACAAAA TACACCTG CTGCAAATA chrX:7888756-7888836 9 1.79e-04 AATGTCGA GGCAGGTG TAACTTTTGT chrV:16169248-16169328 42 1.79e-04 AAAGAAAACG TACAGGTG AAATAAATGG chrV:9053509-9053589 41 1.79e-04 GTTTCCTTGG TACAGGTG GAAATATCGA chrV:2814002-2814082 11 1.79e-04 TGAAAAAAAT GGCAGGTG AAAACTATCC chrIV:7353730-7353810 16 1.79e-04 TTTTTCATTT TCCAGCTG TACGCGGAAA chrV:4707805-4707885 65 1.79e-04 TGATACAATT TACAGGTG GTTGGGAA chrI:14973378-14973458 30 2.12e-04 TTTTCCCCGC AACAGGTG TATTTGTGCC chrX:1830178-1830258 25 2.12e-04 TGGTGAGCTA AACACCTG TGTCAGCAGA chrV:15858442-15858522 3 2.12e-04 AG AACAGGTG AAATTTGATT chrX:8440520-8440600 21 2.12e-04 AATTCATGGA AACACCTG TTGTATTTTG chrX:15350410-15350490 16 2.12e-04 TCTAGCATAA AACACCTG TTGCCGGAAA chrII:8191454-8191534 67 2.12e-04 CTTCATGAGA AACAGGTG CATGGC chrI:7406091-7406171 55 2.12e-04 TTCTGTTTCT AACAGGTG TTGTTGGAGG chrV:5708313-5708393 43 2.12e-04 ACAAAACTAA AACACCTG ATTCTAGAGA chrX:8582933-8583013 41 2.12e-04 TTATTCCAAG AACAGGTG CAAAGCTATA chrV:15847346-15847426 21 2.12e-04 CAGAAATAGG AACAGGTG AAAATTAATA chrI:9443487-9443567 51 2.12e-04 CTGGAAAGGA AACAGGTG AAAATCTAGC chrII:8396577-8396657 31 2.12e-04 AATTCGGTGG AACAGGTG GAAAAAAATG chrII:12387646-12387726 20 2.12e-04 GTTTCCTTCG AACAGGTG AAATTGATCT chrIII:9478976-9479056 66 2.12e-04 GCATCAAAGG AACAGGTG AGTTTTC chrII:8610744-8610824 53 2.12e-04 TATTCCACAT AACAGGTG CTTTTATCCC chrIV:15687984-15688064 2 2.12e-04 A AACAGGTG AAACCACTCC chrX:4625239-4625319 61 2.24e-04 AAACAAAAAA TTCACGTG TTCTCGCATT chrI:2273951-2274031 38 2.41e-04 AATCAGAAAT ATCACGTG ATTGTTAGGT chrX:11375729-11375809 73 2.41e-04 TTGTTAGTTT GACAGCTG chrIV:10206130-10206210 14 2.41e-04 AGGCGGTACT GACAGCTG ATTCCCTTGT chrV:666661-666741 38 2.69e-04 AAGTGATTCA GGCACGTG GCAACTCGCT chrIII:9739007-9739087 14 2.69e-04 CCGTCACTTT TCCACCTG TTCTGTTGTC chrII:9759224-9759304 33 2.69e-04 CCCTCATAAA TCCAGGTG ATTTTTTTTT chrV:18473570-18473650 20 2.69e-04 CTTTTCAATT TCCACCTG CGAAAGGAAA chrIII:6264027-6264107 16 2.69e-04 TTATTTTCCT TCCAGGTG ATTTTTTATT chrV:19329559-19329639 29 2.69e-04 ACAATCACTT TCCACCTG CCACGTATTC chrII:10150686-10150766 69 2.69e-04 GTGATAAAGT TCCAGGTG AAAA chrV:15400241-15400321 21 2.69e-04 ATCGCGAAAT TCCACCTG CTCGTCTTCT chrII:9279175-9279255 42 2.69e-04 AAAGTGAATT TCCACCTG TTCCAAGAAA chrIV:6200408-6200488 46 2.69e-04 TTCTCCAGAA TCCAGGTG ATTTTTCTGT chrV:8170456-8170536 42 3.05e-04 ATAATTTCCA ACCACCTG TCTGTGAATA chrII:6027993-6028073 44 3.05e-04 ATATTGTTTT ACCACCTG ATAATTTGTT chrIV:4288426-4288506 26 3.05e-04 ATCAACCAAA AACACGTG TCATTCCAAG chrX:980799-980879 37 3.08e-04 ACGCAGTTTT CGCAGCTG TTTCCGGGCT chrX:7447490-7447570 69 3.08e-04 GTTTTGAAAA CGCAGCTG AACC chrIV:10890239-10890319 46 3.24e-04 AAATTAGAGA GACAGGTG ATATTCAAAT chrIV:6199144-6199224 32 3.24e-04 AAAATTAGGT GACAGGTG AATGTTTGAT chrV:2816020-2816100 12 3.24e-04 AGGAAATCAC GACAGGTG AACTTGGCTC chrV:9051679-9051759 9 3.24e-04 AGAAACTA GACAGGTG AATTGCGTTC chrIV:12918362-12918442 5 3.24e-04 AAAA GACAGGTG AAATACTGGG chrV:8299515-8299595 24 3.24e-04 AAGACCTGTC GACAGGTG CAAAAACAAA chrII:4851090-4851170 30 3.24e-04 ATGAATAAAT GCCAGCTG TCGGGTAGAC chrI:13034453-13034533 53 3.50e-04 GCACCTAGCA CGCAGGTG ATTTAACACA chrX:14930389-14930469 55 3.50e-04 GATCCAGGAG CGCAGGTG CTCTCACACA chrV:10710492-10710572 32 3.50e-04 TCATTTGCCA CGCACCTG GCTACCGTAA chrIV:9053531-9053611 49 3.70e-04 TCCAAGAAAC GCCACCTG AAACCTTTAT chrV:13185540-13185620 60 3.70e-04 TTTTTCGAAT GCCAGGTG ATAAATTGCT chrX:1267542-1267622 50 3.99e-04 AAATTCGAAA AGCATCTG CTCGCAACAA chrII:9952000-9952080 13 4.79e-04 TTACTTGGAA TTCATCTG AAAACGCAAA chrIV:8685976-8686056 6 4.79e-04 CGTGC AGCATGTG AGAATGACGA chrV:10349075-10349155 42 4.99e-04 TTGACATAGA ATCATCTG TCCCACTTCC chrV:15849691-15849771 60 4.99e-04 TCCAAAAACA ATCATCTG ATTTATCACA chrIV:6511912-6511992 71 5.63e-04 GAAAACCAGA AACATCTG TC chrX:13814041-13814121 33 5.63e-04 GAATCGAATT AACATCTG CTCTACATAA chrI:7347581-7347661 24 6.07e-04 TCGTAGTTTT CCCACCTG AAAAATTCAA chrX:4561611-4561691 59 6.07e-04 TAGTCTGACC CACACGTG AGAGATGATA chrIII:2069390-2069470 40 6.07e-04 ATTAATCATA TTCATGTG CTTGCTTGCA chrV:4870781-4870861 22 6.65e-04 AGGAAACGTT GGCATGTG CTTGATCAGA chrII:10730843-10730923 22 6.65e-04 ATAGTTCTTC TCCATCTG GTTCTGATTT chrI:11684427-11684507 35 6.65e-04 CGTACACGGG TACATGTG TTGTTCTTAG chrII:10852800-10852880 24 7.18e-04 TAAAAGAAAA TGCACATG TCGATTCCAA chrII:10132951-10133031 60 7.18e-04 GATTCTTAGA AACATGTG CTCAACGTTT chrX:2252573-2252653 42 8.18e-04 TTTTCAGAGG TACAGATG TTTTTTGTAA chrV:4871855-4871935 71 8.18e-04 CATTTCATTG TACAGATG TT chrV:10259404-10259484 57 8.18e-04 ATTGCAGAGA TCCATGTG GATATTGAAG chrIV:5580747-5580827 28 8.58e-04 TTCTCACGCG AACAGATG TGTCTCAATT chrIV:3361733-3361813 32 1.07e-03 ACTGCACATT TTCAGCCG TTTTCTCAAA chrIV:8681011-8681091 34 1.11e-03 TGAAAGATGT GTCACATG GGTCTTTTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:10912456-10912536 6.3e-06 63_[+1]_9 chrV:20354146-20354226 6.3e-06 16_[+1]_56 chrV:10276197-10276277 6.3e-06 34_[+1]_38 chrI:12613508-12613588 1.2e-05 4_[+1]_68 chrV:14380311-14380391 1.2e-05 32_[+1]_40 chrX:13347396-13347476 1.2e-05 4_[+1]_68 chrV:16193198-16193278 1.2e-05 49_[+1]_23 chrV:14210994-14211074 1.2e-05 32_[+1]_40 chrII:12386898-12386978 1.2e-05 23_[+1]_49 chrV:17178666-17178746 1.2e-05 27_[+1]_45 chrII:1293865-1293945 1.2e-05 35_[+1]_37 chrIV:14536066-14536146 1.2e-05 48_[+1]_24 chrV:11022282-11022362 2.5e-05 36_[+1]_36 chrIV:3917007-3917087 2.5e-05 7_[+1]_65 chrIV:8179172-8179252 2.5e-05 57_[+1]_15 chrII:12418166-12418246 2.5e-05 25_[+1]_47 chrIV:3493470-3493550 2.5e-05 69_[+1]_3 chrV:8082343-8082423 2.5e-05 27_[+1]_45 chrX:12951350-12951430 2.5e-05 45_[+1]_27 chrV:9897084-9897164 2.5e-05 51_[+1]_21 chrV:20351227-20351307 2.5e-05 21_[+1]_51 chrV:17452609-17452689 2.5e-05 1_[+1]_71 chrIV:8682023-8682103 2.5e-05 20_[+1]_52 chrX:16470681-16470761 2.5e-05 55_[+1]_17 chrX:4628487-4628567 2.5e-05 3_[+1]_69 chrV:8978706-8978786 2.5e-05 19_[+1]_53 chrV:17182247-17182327 2.5e-05 32_[+1]_40 chrV:11014917-11014997 2.5e-05 24_[+1]_48 chrIV:592541-592621 2.5e-05 14_[+1]_58 chrII:12387845-12387925 4.9e-05 42_[+1]_30 chrIII:9365864-9365944 4.9e-05 67_[+1]_5 chrV:13094545-13094625 4.9e-05 36_[+1]_36 chrI:40195-40275 4.9e-05 37_[+1]_35 chrV:13366604-13366684 4.9e-05 36_[+1]_36 chrIV:3772014-3772094 4.9e-05 41_[+1]_31 chrIV:5102092-5102172 4.9e-05 2_[+1]_70 chrX:5387851-5387931 4.9e-05 15_[+1]_57 chrI:13008294-13008374 4.9e-05 4_[+1]_68 chrV:618073-618153 4.9e-05 44_[+1]_28 chrX:11875434-11875514 4.9e-05 22_[+1]_50 chrIV:8046608-8046688 4.9e-05 19_[+1]_53 chrX:4902542-4902622 4.9e-05 13_[+1]_59 chrI:12620665-12620745 4.9e-05 51_[+1]_21 chrIV:15908412-15908492 4.9e-05 58_[+1]_14 chrIV:2972135-2972215 4.9e-05 37_[+1]_35 chrII:9146263-9146343 4.9e-05 47_[+1]_25 chrIV:7296933-7297013 4.9e-05 24_[+1]_48 chrV:15841231-15841311 4.9e-05 19_[+1]_53 chrV:9703035-9703115 4.9e-05 51_[+1]_21 chrX:3894171-3894251 4.9e-05 23_[+1]_49 chrII:2700366-2700446 4.9e-05 19_[+1]_53 chrV:3176211-3176291 4.9e-05 61_[+1]_11 chrII:8722114-8722194 4.9e-05 58_[+1]_14 chrV:15850571-15850651 4.9e-05 50_[+1]_22 chrX:5836686-5836766 4.9e-05 37_[+1]_35 chrV:17030589-17030669 4.9e-05 6_[+1]_66 chrIV:7550602-7550682 6e-05 38_[+1]_34 chrIV:11892714-11892794 7.4e-05 72_[+1] chrV:8263780-8263860 7.4e-05 34_[+1]_38 chrV:342557-342637 7.4e-05 69_[+1]_3 chrV:6003606-6003686 7.4e-05 26_[+1]_46 chrIV:14622204-14622284 9.1e-05 36_[+1]_36 chrV:2813262-2813342 9.1e-05 27_[+1]_45 chrV:10873791-10873871 9.1e-05 44_[+1]_28 chrV:9358937-9359017 9.1e-05 36_[+1]_36 chrII:7924252-7924332 9.1e-05 58_[+1]_14 chrII:5775699-5775779 9.1e-05 50_[+1]_22 chrV:7477024-7477104 9.1e-05 24_[+1]_48 chrIV:11893794-11893874 9.1e-05 48_[+1]_24 chrV:13804907-13804987 9.1e-05 30_[+1]_42 chrII:10154439-10154519 0.00012 34_[+1]_38 chrV:4283843-4283923 0.00012 34_[+1]_38 chrI:10756798-10756878 0.00012 70_[+1]_2 chrIII:180206-180286 0.00012 3_[+1]_69 chrII:13722618-13722698 0.00012 16_[+1]_56 chrII:2579634-2579714 0.00012 10_[+1]_62 chrV:17448218-17448298 0.00012 48_[+1]_24 chrII:12969636-12969716 0.00012 21_[+1]_51 chrIII:6610833-6610913 0.00012 38_[+1]_34 chrIV:7532535-7532615 0.00012 52_[+1]_20 chrII:6216782-6216862 0.00012 30_[+1]_42 chrV:18827533-18827613 0.00012 9_[+1]_63 chrV:8397676-8397756 0.00012 50_[+1]_22 chrV:4002612-4002692 0.00012 50_[+1]_22 chrII:5138309-5138389 0.00012 34_[+1]_38 chrII:3514796-3514876 0.00012 25_[+1]_47 chrII:7709661-7709741 0.00012 50_[+1]_22 chrV:12031162-12031242 0.00012 61_[+1]_11 chrV:12433922-12434002 0.00012 1_[+1]_71 chrV:6288171-6288251 0.00012 27_[+1]_45 chrV:10998431-10998511 0.00012 28_[+1]_44 chrIII:9370954-9371034 0.00012 53_[+1]_19 chrIV:6058783-6058863 0.00012 47_[+1]_25 chrII:9139331-9139411 0.00012 47_[+1]_25 chrV:215856-215936 0.00012 23_[+1]_49 chrV:16497663-16497743 0.00012 41_[+1]_31 chrV:11201985-11202065 0.00012 59_[+1]_13 chrV:6857209-6857289 0.00014 64_[+1]_8 chrIV:6284866-6284946 0.00014 10_[+1]_62 chrI:4200366-4200446 0.00014 16_[+1]_56 chrIV:15814720-15814800 0.00014 47_[+1]_25 chrV:17188676-17188756 0.00014 63_[+1]_9 chrV:11033388-11033468 0.00014 72_[+1] chrV:20775566-20775646 0.00014 71_[+1]_1 chrII:3706504-3706584 0.00014 43_[+1]_29 chrV:4240406-4240486 0.00014 52_[+1]_20 chrV:16350200-16350280 0.00014 64_[+1]_8 chrIV:3471476-3471556 0.00014 40_[+1]_32 chrV:10063809-10063889 0.00014 30_[+1]_42 chrX:4562438-4562518 0.00014 41_[+1]_31 chrII:8554727-8554807 0.00014 10_[+1]_62 chrIV:3453505-3453585 0.00014 30_[+1]_42 chrIV:3482719-3482799 0.00014 19_[+1]_53 chrX:12022655-12022735 0.00014 17_[+1]_55 chrX:10568053-10568133 0.00018 68_[+1]_4 chrV:7386295-7386375 0.00018 23_[+1]_49 chrII:12469870-12469950 0.00018 64_[+1]_8 chrV:17450679-17450759 0.00018 63_[+1]_9 chrX:7888756-7888836 0.00018 8_[+1]_64 chrV:16169248-16169328 0.00018 41_[+1]_31 chrV:9053509-9053589 0.00018 40_[+1]_32 chrV:2814002-2814082 0.00018 10_[+1]_62 chrIV:7353730-7353810 0.00018 15_[+1]_57 chrV:4707805-4707885 0.00018 64_[+1]_8 chrI:14973378-14973458 0.00021 29_[+1]_43 chrX:1830178-1830258 0.00021 24_[+1]_48 chrV:15858442-15858522 0.00021 2_[+1]_70 chrX:8440520-8440600 0.00021 20_[+1]_52 chrX:15350410-15350490 0.00021 15_[+1]_57 chrII:8191454-8191534 0.00021 66_[+1]_6 chrI:7406091-7406171 0.00021 54_[+1]_18 chrV:5708313-5708393 0.00021 42_[+1]_30 chrX:8582933-8583013 0.00021 40_[+1]_32 chrV:15847346-15847426 0.00021 20_[+1]_52 chrI:9443487-9443567 0.00021 50_[+1]_22 chrII:8396577-8396657 0.00021 30_[+1]_42 chrII:12387646-12387726 0.00021 19_[+1]_53 chrIII:9478976-9479056 0.00021 65_[+1]_7 chrII:8610744-8610824 0.00021 52_[+1]_20 chrIV:15687984-15688064 0.00021 1_[+1]_71 chrX:4625239-4625319 0.00022 60_[+1]_12 chrI:2273951-2274031 0.00024 37_[+1]_35 chrX:11375729-11375809 0.00024 72_[+1] chrIV:10206130-10206210 0.00024 13_[+1]_59 chrV:666661-666741 0.00027 37_[+1]_35 chrIII:9739007-9739087 0.00027 13_[+1]_59 chrII:9759224-9759304 0.00027 32_[+1]_40 chrV:18473570-18473650 0.00027 19_[+1]_53 chrIII:6264027-6264107 0.00027 15_[+1]_57 chrV:19329559-19329639 0.00027 28_[+1]_44 chrII:10150686-10150766 0.00027 68_[+1]_4 chrV:15400241-15400321 0.00027 20_[+1]_52 chrII:9279175-9279255 0.00027 41_[+1]_31 chrIV:6200408-6200488 0.00027 45_[+1]_27 chrV:8170456-8170536 0.0003 41_[+1]_31 chrII:6027993-6028073 0.0003 43_[+1]_29 chrIV:4288426-4288506 0.0003 25_[+1]_47 chrX:980799-980879 0.00031 36_[+1]_36 chrX:7447490-7447570 0.00031 68_[+1]_4 chrIV:10890239-10890319 0.00032 45_[+1]_27 chrIV:6199144-6199224 0.00032 31_[+1]_41 chrV:2816020-2816100 0.00032 11_[+1]_61 chrV:9051679-9051759 0.00032 8_[+1]_64 chrIV:12918362-12918442 0.00032 4_[+1]_68 chrV:8299515-8299595 0.00032 23_[+1]_49 chrII:4851090-4851170 0.00032 29_[+1]_43 chrI:13034453-13034533 0.00035 52_[+1]_20 chrX:14930389-14930469 0.00035 54_[+1]_18 chrV:10710492-10710572 0.00035 31_[+1]_41 chrIV:9053531-9053611 0.00037 48_[+1]_24 chrV:13185540-13185620 0.00037 59_[+1]_13 chrX:1267542-1267622 0.0004 49_[+1]_23 chrII:9952000-9952080 0.00048 12_[+1]_60 chrIV:8685976-8686056 0.00048 5_[+1]_67 chrV:10349075-10349155 0.0005 41_[+1]_31 chrV:15849691-15849771 0.0005 59_[+1]_13 chrIV:6511912-6511992 0.00056 70_[+1]_2 chrX:13814041-13814121 0.00056 32_[+1]_40 chrI:7347581-7347661 0.00061 23_[+1]_49 chrX:4561611-4561691 0.00061 58_[+1]_14 chrIII:2069390-2069470 0.00061 39_[+1]_33 chrV:4870781-4870861 0.00066 21_[+1]_51 chrII:10730843-10730923 0.00066 21_[+1]_51 chrI:11684427-11684507 0.00066 34_[+1]_38 chrII:10852800-10852880 0.00072 23_[+1]_49 chrII:10132951-10133031 0.00072 59_[+1]_13 chrX:2252573-2252653 0.00082 41_[+1]_31 chrV:4871855-4871935 0.00082 70_[+1]_2 chrV:10259404-10259484 0.00082 56_[+1]_16 chrIV:5580747-5580827 0.00086 27_[+1]_45 chrIV:3361733-3361813 0.0011 31_[+1]_41 chrIV:8681011-8681091 0.0011 33_[+1]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WDCASSTG width=8 seqs=192 chrIV:10912456-10912536 ( 64) TGCAGCTG 1 chrV:20354146-20354226 ( 17) TGCAGCTG 1 chrV:10276197-10276277 ( 35) TGCAGCTG 1 chrI:12613508-12613588 ( 5) AGCAGCTG 1 chrV:14380311-14380391 ( 33) AGCAGCTG 1 chrX:13347396-13347476 ( 5) AGCAGCTG 1 chrV:16193198-16193278 ( 50) AGCAGCTG 1 chrV:14210994-14211074 ( 33) AGCAGCTG 1 chrII:12386898-12386978 ( 24) AGCAGCTG 1 chrV:17178666-17178746 ( 28) AGCAGCTG 1 chrII:1293865-1293945 ( 36) AGCAGCTG 1 chrIV:14536066-14536146 ( 49) AGCAGCTG 1 chrV:11022282-11022362 ( 37) TGCAGGTG 1 chrIV:3917007-3917087 ( 8) TGCAGGTG 1 chrIV:8179172-8179252 ( 58) TGCAGGTG 1 chrII:12418166-12418246 ( 26) TGCACCTG 1 chrIV:3493470-3493550 ( 70) TGCAGGTG 1 chrV:8082343-8082423 ( 28) TGCAGGTG 1 chrX:12951350-12951430 ( 46) TGCAGGTG 1 chrV:9897084-9897164 ( 52) TGCAGGTG 1 chrV:20351227-20351307 ( 22) TGCACCTG 1 chrV:17452609-17452689 ( 2) TGCACCTG 1 chrIV:8682023-8682103 ( 21) TGCACCTG 1 chrX:16470681-16470761 ( 56) TGCAGGTG 1 chrX:4628487-4628567 ( 4) TGCACCTG 1 chrV:8978706-8978786 ( 20) TGCAGGTG 1 chrV:17182247-17182327 ( 33) TGCACCTG 1 chrV:11014917-11014997 ( 25) TGCAGGTG 1 chrIV:592541-592621 ( 15) TGCAGGTG 1 chrII:12387845-12387925 ( 43) AGCAGGTG 1 chrIII:9365864-9365944 ( 68) AGCAGGTG 1 chrV:13094545-13094625 ( 37) AGCAGGTG 1 chrI:40195-40275 ( 38) AGCAGGTG 1 chrV:13366604-13366684 ( 37) TTCAGCTG 1 chrIV:3772014-3772094 ( 42) AGCACCTG 1 chrIV:5102092-5102172 ( 3) AGCACCTG 1 chrX:5387851-5387931 ( 16) AGCAGGTG 1 chrI:13008294-13008374 ( 5) AGCAGGTG 1 chrV:618073-618153 ( 45) AGCAGGTG 1 chrX:11875434-11875514 ( 23) TTCAGCTG 1 chrIV:8046608-8046688 ( 20) TTCAGCTG 1 chrX:4902542-4902622 ( 14) TTCAGCTG 1 chrI:12620665-12620745 ( 52) TTCAGCTG 1 chrIV:15908412-15908492 ( 59) AGCAGGTG 1 chrIV:2972135-2972215 ( 38) TTCAGCTG 1 chrII:9146263-9146343 ( 48) AGCAGGTG 1 chrIV:7296933-7297013 ( 25) TTCAGCTG 1 chrV:15841231-15841311 ( 20) AGCAGGTG 1 chrV:9703035-9703115 ( 52) TTCAGCTG 1 chrX:3894171-3894251 ( 24) AGCAGGTG 1 chrII:2700366-2700446 ( 20) AGCAGGTG 1 chrV:3176211-3176291 ( 62) TTCAGCTG 1 chrII:8722114-8722194 ( 59) TTCAGCTG 1 chrV:15850571-15850651 ( 51) AGCAGGTG 1 chrX:5836686-5836766 ( 38) TTCAGCTG 1 chrV:17030589-17030669 ( 7) TTCAGCTG 1 chrIV:7550602-7550682 ( 39) ATCAGCTG 1 chrIV:11892714-11892794 ( 73) GGCAGCTG 1 chrV:8263780-8263860 ( 35) GGCAGCTG 1 chrV:342557-342637 ( 70) TACAGCTG 1 chrV:6003606-6003686 ( 27) GGCAGCTG 1 chrIV:14622204-14622284 ( 37) AACAGCTG 1 chrV:2813262-2813342 ( 28) AACAGCTG 1 chrV:10873791-10873871 ( 45) AACAGCTG 1 chrV:9358937-9359017 ( 37) AACAGCTG 1 chrII:7924252-7924332 ( 59) AACAGCTG 1 chrII:5775699-5775779 ( 51) AACAGCTG 1 chrV:7477024-7477104 ( 25) AACAGCTG 1 chrIV:11893794-11893874 ( 49) TGCACGTG 1 chrV:13804907-13804987 ( 31) AACAGCTG 1 chrII:10154439-10154519 ( 35) TTCACCTG 1 chrV:4283843-4283923 ( 35) TTCACCTG 1 chrI:10756798-10756878 ( 71) TTCACCTG 1 chrIII:180206-180286 ( 4) TTCACCTG 1 chrII:13722618-13722698 ( 17) TTCACCTG 1 chrII:2579634-2579714 ( 11) TTCACCTG 1 chrV:17448218-17448298 ( 49) TTCACCTG 1 chrII:12969636-12969716 ( 22) TTCACCTG 1 chrIII:6610833-6610913 ( 39) TTCACCTG 1 chrIV:7532535-7532615 ( 53) TTCACCTG 1 chrII:6216782-6216862 ( 31) TTCACCTG 1 chrV:18827533-18827613 ( 10) TTCACCTG 1 chrV:8397676-8397756 ( 51) TTCACCTG 1 chrV:4002612-4002692 ( 51) TTCACCTG 1 chrII:5138309-5138389 ( 35) TTCACCTG 1 chrII:3514796-3514876 ( 26) TTCACCTG 1 chrII:7709661-7709741 ( 51) TTCACCTG 1 chrV:12031162-12031242 ( 62) TTCACCTG 1 chrV:12433922-12434002 ( 2) TTCACCTG 1 chrV:6288171-6288251 ( 28) TTCAGGTG 1 chrV:10998431-10998511 ( 29) TTCACCTG 1 chrIII:9370954-9371034 ( 54) TTCACCTG 1 chrIV:6058783-6058863 ( 48) TTCACCTG 1 chrII:9139331-9139411 ( 48) TTCACCTG 1 chrV:215856-215936 ( 24) TTCACCTG 1 chrV:16497663-16497743 ( 42) TTCACCTG 1 chrV:11201985-11202065 ( 60) TTCACCTG 1 chrV:6857209-6857289 ( 65) ATCACCTG 1 chrIV:6284866-6284946 ( 11) ATCACCTG 1 chrI:4200366-4200446 ( 17) ATCACCTG 1 chrIV:15814720-15814800 ( 48) ATCACCTG 1 chrV:17188676-17188756 ( 64) ATCACCTG 1 chrV:11033388-11033468 ( 73) ATCACCTG 1 chrV:20775566-20775646 ( 72) ATCACCTG 1 chrII:3706504-3706584 ( 44) ATCACCTG 1 chrV:4240406-4240486 ( 53) ATCACCTG 1 chrV:16350200-16350280 ( 65) ATCACCTG 1 chrIV:3471476-3471556 ( 41) ATCAGGTG 1 chrV:10063809-10063889 ( 31) ATCACCTG 1 chrX:4562438-4562518 ( 42) ATCACCTG 1 chrII:8554727-8554807 ( 11) ATCACCTG 1 chrIV:3453505-3453585 ( 31) ATCACCTG 1 chrIV:3482719-3482799 ( 20) ATCACCTG 1 chrX:12022655-12022735 ( 18) ATCACCTG 1 chrX:10568053-10568133 ( 69) GGCAGGTG 1 chrV:7386295-7386375 ( 24) GGCAGGTG 1 chrII:12469870-12469950 ( 65) GGCAGGTG 1 chrV:17450679-17450759 ( 64) TACACCTG 1 chrX:7888756-7888836 ( 9) GGCAGGTG 1 chrV:16169248-16169328 ( 42) TACAGGTG 1 chrV:9053509-9053589 ( 41) TACAGGTG 1 chrV:2814002-2814082 ( 11) GGCAGGTG 1 chrIV:7353730-7353810 ( 16) TCCAGCTG 1 chrV:4707805-4707885 ( 65) TACAGGTG 1 chrI:14973378-14973458 ( 30) AACAGGTG 1 chrX:1830178-1830258 ( 25) AACACCTG 1 chrV:15858442-15858522 ( 3) AACAGGTG 1 chrX:8440520-8440600 ( 21) AACACCTG 1 chrX:15350410-15350490 ( 16) AACACCTG 1 chrII:8191454-8191534 ( 67) AACAGGTG 1 chrI:7406091-7406171 ( 55) AACAGGTG 1 chrV:5708313-5708393 ( 43) AACACCTG 1 chrX:8582933-8583013 ( 41) AACAGGTG 1 chrV:15847346-15847426 ( 21) AACAGGTG 1 chrI:9443487-9443567 ( 51) AACAGGTG 1 chrII:8396577-8396657 ( 31) AACAGGTG 1 chrII:12387646-12387726 ( 20) AACAGGTG 1 chrIII:9478976-9479056 ( 66) AACAGGTG 1 chrII:8610744-8610824 ( 53) AACAGGTG 1 chrIV:15687984-15688064 ( 2) AACAGGTG 1 chrX:4625239-4625319 ( 61) TTCACGTG 1 chrI:2273951-2274031 ( 38) ATCACGTG 1 chrX:11375729-11375809 ( 73) GACAGCTG 1 chrIV:10206130-10206210 ( 14) GACAGCTG 1 chrV:666661-666741 ( 38) GGCACGTG 1 chrIII:9739007-9739087 ( 14) TCCACCTG 1 chrII:9759224-9759304 ( 33) TCCAGGTG 1 chrV:18473570-18473650 ( 20) TCCACCTG 1 chrIII:6264027-6264107 ( 16) TCCAGGTG 1 chrV:19329559-19329639 ( 29) TCCACCTG 1 chrII:10150686-10150766 ( 69) TCCAGGTG 1 chrV:15400241-15400321 ( 21) TCCACCTG 1 chrII:9279175-9279255 ( 42) TCCACCTG 1 chrIV:6200408-6200488 ( 46) TCCAGGTG 1 chrV:8170456-8170536 ( 42) ACCACCTG 1 chrII:6027993-6028073 ( 44) ACCACCTG 1 chrIV:4288426-4288506 ( 26) AACACGTG 1 chrX:980799-980879 ( 37) CGCAGCTG 1 chrX:7447490-7447570 ( 69) CGCAGCTG 1 chrIV:10890239-10890319 ( 46) GACAGGTG 1 chrIV:6199144-6199224 ( 32) GACAGGTG 1 chrV:2816020-2816100 ( 12) GACAGGTG 1 chrV:9051679-9051759 ( 9) GACAGGTG 1 chrIV:12918362-12918442 ( 5) GACAGGTG 1 chrV:8299515-8299595 ( 24) GACAGGTG 1 chrII:4851090-4851170 ( 30) GCCAGCTG 1 chrI:13034453-13034533 ( 53) CGCAGGTG 1 chrX:14930389-14930469 ( 55) CGCAGGTG 1 chrV:10710492-10710572 ( 32) CGCACCTG 1 chrIV:9053531-9053611 ( 49) GCCACCTG 1 chrV:13185540-13185620 ( 60) GCCAGGTG 1 chrX:1267542-1267622 ( 50) AGCATCTG 1 chrII:9952000-9952080 ( 13) TTCATCTG 1 chrIV:8685976-8686056 ( 6) AGCATGTG 1 chrV:10349075-10349155 ( 42) ATCATCTG 1 chrV:15849691-15849771 ( 60) ATCATCTG 1 chrIV:6511912-6511992 ( 71) AACATCTG 1 chrX:13814041-13814121 ( 33) AACATCTG 1 chrI:7347581-7347661 ( 24) CCCACCTG 1 chrX:4561611-4561691 ( 59) CACACGTG 1 chrIII:2069390-2069470 ( 40) TTCATGTG 1 chrV:4870781-4870861 ( 22) GGCATGTG 1 chrII:10730843-10730923 ( 22) TCCATCTG 1 chrI:11684427-11684507 ( 35) TACATGTG 1 chrII:10852800-10852880 ( 24) TGCACATG 1 chrII:10132951-10133031 ( 60) AACATGTG 1 chrX:2252573-2252653 ( 42) TACAGATG 1 chrV:4871855-4871935 ( 71) TACAGATG 1 chrV:10259404-10259484 ( 57) TCCATGTG 1 chrIV:5580747-5580827 ( 28) AACAGATG 1 chrIV:3361733-3361813 ( 32) TTCAGCCG 1 chrIV:8681011-8681091 ( 34) GTCACATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.00693 E= 1.2e-194 39 -234 -64 44 -38 -97 88 5 -1423 244 -1423 -1423 169 -1423 -1423 -1423 -1423 105 163 -227 -358 171 105 -1423 -1423 -514 -1423 161 -1423 -1423 249 -1423 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 192 E= 1.2e-194 0.406250 0.036458 0.114583 0.442708 0.239583 0.093750 0.328125 0.338542 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.380208 0.552083 0.067708 0.026042 0.604167 0.369792 0.000000 0.000000 0.005208 0.000000 0.994792 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WDCASSTG MEME-1 regular expression -------------------------------------------------------------------------------- [TA][TGA]CA[GC][CG]TG -------------------------------------------------------------------------------- Time 4.78 secs. ******************************************************************************** ******************************************************************************** MOTIF TTCYHRGA MEME-2 width = 8 sites = 144 llr = 962 E-value = 1.7e-054 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::135:a pos.-specific C ::8421:: probability G ::::23a: matrix T aa3542:: bits 2.5 * 2.2 * 2.0 * 1.7 ** Relative 1.5 *** ** Entropy 1.2 *** ** (9.6 bits) 1.0 *** ** 0.7 *** ** 0.5 **** ** 0.2 **** *** 0.0 -------- Multilevel TTCTTAGA consensus TCAG sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrI:7347581-7347661 43 3.18e-05 AAAATTCAAT TTCCCAGA ATAAATATTT chrV:17448218-17448298 73 3.18e-05 ATATTATCGA TTCCCAGA chrIV:15908412-15908492 50 3.18e-05 CACTAATTGT TTCCTAGA AAGCAGGTGA chrV:11033388-11033468 55 3.18e-05 ATAATCTGAA TTCCCAGA ATACGAATGT chrV:17182247-17182327 57 3.18e-05 ATATTCTTGA TTCCCAGA AACTTCCAGA chrX:980799-980879 69 5.01e-05 CTCTACTTCT TTCCCGGA AAAT chrI:12620665-12620745 35 5.01e-05 ACGTCATTTT TTCCTGGA ATTCAGATTT chrII:12386898-12386978 64 5.01e-05 AGGGGGGGTT TTCCTGGA AAAGTCACT chrV:6778613-6778693 68 5.01e-05 CTTGGCGTGT TTCCTGGA AACCT chrV:10259404-10259484 39 5.01e-05 TAAATGGCAA TTCCTGGA ATTGCAGAGA chrX:13814041-13814121 17 5.01e-05 ACAAAAACGT TTCCTGGA ATCGAATTAA chrIV:15687984-15688064 35 5.01e-05 TTGACCGTCT TTCCTGGA AAACTCAAAA chrX:7886344-7886424 55 5.01e-05 CGAACAATCA TTCCTGGA AAACGACACA chrV:13338826-13338906 12 6.12e-05 TTAAGTAGTC TTCCGAGA CTTTATCAGG chrIV:1977885-1977965 11 6.12e-05 AGGTTCAAAG TTCCGAGA AAAAAAATTC chrIV:6511912-6511992 27 6.12e-05 AGTTTTCTGT TTCCGAGA ATTCTATTCA chrII:12469870-12469950 43 6.12e-05 TTTGAACTTG TTCCGAGA ATGTTAACTA chrIV:11893794-11893874 62 6.12e-05 ACGTGGGATT TTCCGAGA AATATGAAAG chrV:2814002-2814082 45 6.12e-05 TAGATGTTGG TTCCGAGA ACTCGAATTT chrII:10730843-10730923 42 8.69e-05 TCTGATTTTG TTCCAAGA AACTGAAAAA chrII:10852800-10852880 36 8.69e-05 CACATGTCGA TTCCAAGA ACTCACAGCG chrIV:9053531-9053611 38 8.69e-05 CCCTTTCGTA TTCCAAGA AACGCCACCT chrIV:11892714-11892794 14 8.69e-05 TCATATTACA TTCCAAGA ATATCTGATA chrII:14834755-14834835 48 8.69e-05 ATCTCTGTTT TTCCAAGA GCAAAAAAAT chrIV:4288426-4288506 37 8.69e-05 ACACGTGTCA TTCCAAGA AGATATGAAG chrV:10710492-10710572 55 8.69e-05 CGTAATCTCT TTCCGGGA AACATGTGGT chrV:15309150-15309230 19 8.69e-05 AGAACTGGGT TTCCAAGA GCAGTGCTTA chrV:15162856-15162936 30 8.69e-05 AATATACATT TTCCAAGA ATTTGGTGTT chrII:3514796-3514876 60 8.69e-05 AAACGCCAAA TTCCAAGA AAAACATTTT chrV:19583803-19583883 31 8.69e-05 TTGAGCCAAT TTCCGGGA ATTTTCAGAG chrIII:5361062-5361142 37 8.69e-05 CCCTTCCTTT TTCCGGGA ATTTTTTGTT chrV:4240406-4240486 61 8.69e-05 AAATCACCTG TTCCAAGA AATTATTCAA chrV:8299515-8299595 59 8.69e-05 CAACAGGATT TTCCAAGA ATTCTTCTTA chrII:9279175-9279255 50 8.69e-05 TTTCCACCTG TTCCAAGA AAACTCGTTT chrV:17030589-17030669 49 8.69e-05 ATTGTACAAA TTCCAAGA ACTTGATCAA chrIV:3482719-3482799 30 8.69e-05 ATCACCTGTC TTCCAAGA AAATGAAATC chrI:40195-40275 73 1.55e-04 ATTTGTGCTA TTCTTAGA chrI:10756798-10756878 57 1.55e-04 ATTTTGAGAT TTCTCAGA AACAATTTCA chrIV:5580747-5580827 45 1.55e-04 GTGTCTCAAT TTCTCAGA ATATGCAACT chrX:10685617-10685697 62 1.55e-04 ACCATTTCAT TTCCAGGA AAATCAATTA chrV:11022282-11022362 14 1.55e-04 TATTATCCTT TTCTCAGA AAGAACAACA chrIII:2061955-2062035 63 1.55e-04 CTGAAAATGT TTCTCAGA ATTTAAAAAA chrII:10132951-10133031 52 1.55e-04 CGTTTTCAGA TTCTTAGA AACATGTGCT chrV:9358937-9359017 16 1.55e-04 AACTTCTAAA TTCTCAGA ATCAAATGAA chrX:13347396-13347476 41 1.55e-04 CAGGATTCGA TTCCAGGA ACTAGACATG chrIV:8685976-8686056 53 1.55e-04 GTTTTTTCTT TTCTTAGA ACCATTTTCC chrX:12951350-12951430 70 1.55e-04 ATACCAGAAT TTCTCAGA GTT chrII:8713421-8713501 21 1.55e-04 AAAGTAATCT TTCCAGGA ATAGGAAGTT chrV:17452609-17452689 26 1.55e-04 ATATTTTCGA TTCTTAGA AACTTCCTGA chrV:11458039-11458119 34 1.55e-04 TTATTTGTAA TTCTTAGA AAGCAATTGG chrIV:3471476-3471556 21 1.55e-04 AAATTAACTA TTCTCAGA AATTCTGTCA chrX:1267542-1267622 33 1.55e-04 GAAATTCAAA TTCTTAGA AATTCGAAAA chrV:15400241-15400321 64 1.55e-04 TAACCGAAAT TTCCAGGA AATGTTCAA chrII:8722114-8722194 32 1.55e-04 TTTCCTGAAT TTCTTAGA ATCAGAGTGT chrIV:3453505-3453585 39 1.55e-04 CTATCACCTG TTCTCAGA AAAGCCCAGG chrX:5836686-5836766 29 1.55e-04 AACACCTGCT TTCTTAGA ATTCAGCTGT chrII:10154439-10154519 13 1.87e-04 GTTGCAGCTA TTCTTGGA GAACTTTACA chrX:11875434-11875514 48 1.87e-04 CATGTGTTTT TTCTTGGA AAAGGTTTTG chrV:9901299-9901379 33 1.87e-04 AGATTTATTC TTCTTGGA AACGCAATTT chrIV:15906242-15906322 31 1.87e-04 GCGATAATAA TTCTTGGA ACTCATTAAT chrII:12387646-12387726 37 1.87e-04 GAAATTGATC TTCTTGGA AATTCCACCC chrIII:2069390-2069470 22 1.87e-04 TGATCCAAGA TTCTCGGA ATTAATCATA chrV:16497663-16497743 61 1.87e-04 TAAGCATCTG TTCTCGGA AATTTTGTAT chrX:12022655-12022735 33 1.87e-04 CTGTAATAAT TTCTTGGA AACGTTGAAA chrI:2273951-2274031 21 2.07e-04 GAAAATTTTT TTCTGAGA ATCAGAAATA chrI:7285222-7285302 4 2.07e-04 TGT TTCTGAGA AACATTTCAA chrIV:6403558-6403638 17 2.07e-04 AGAGAAAAAG TTCTGAGA ATCTGTTGTT chrV:17192424-17192504 29 2.07e-04 AAAACAAGCT TTCTGAGA ATGCAGTCTG chrX:4628487-4628567 68 2.07e-04 ATTCTTTGTT TTCTGAGA AAAGT chrV:8978706-8978786 42 2.07e-04 TAAAGCTAAA TTCTGAGA GTGTAATGCA chrIV:16287879-16287959 33 2.52e-04 GCAAATTGAA TTCTAAGA AAAACTCTCG chrV:13804907-13804987 13 2.52e-04 AGTTTATGTT TTCTAAGA AACTACGTGC chrV:9049430-9049510 5 2.52e-04 TTAA TTCTGGGA AACTTGATTT chrI:13006392-13006472 33 2.72e-04 TTTTCTAGTT TTCTAGGA AAAAGTTTTA chrII:12418166-12418246 48 2.72e-04 TGATGTGTTT TTCTAGGA AATCTGAATT chrX:994811-994891 20 2.72e-04 TCATGGGCAG TTCTAGGA AAACAAAATA chrV:9051679-9051759 68 3.06e-04 ATAAAATGGA TTCCTTGA AAAGT chrIII:6264027-6264107 33 3.06e-04 GATTTTTTAT TTCCCTGA TTGCCTGTCG chrV:4794446-4794526 59 3.24e-04 CAGTTTCAAG TTCCCCGA ATCCGAATAC chrV:10063809-10063889 56 3.24e-04 CACTGTATTT TTCCTCGA ATTCTTATTC chrV:8082343-8082423 7 3.36e-04 TTATTA TTCCGTGA TTGGGAGTGA chrII:8396577-8396657 2 3.36e-04 G TTCCGTGA ATGAATAACA chrV:13366604-13366684 71 4.34e-04 ATTGCTTCAC TTCTTTGA GA chrV:5708313-5708393 18 4.34e-04 TACACCTGAG TTCTCTGA AAACTAGACA chrV:2816020-2816100 43 4.34e-04 GAATGCGTGA TTCTTTGA AATTGCAGTT chrX:15666619-15666699 29 4.34e-04 TGAACAGAAT TTCTTTGA ATATGATTGA chrI:3014661-3014741 16 4.34e-04 ACAACTAGTT TTCTCTGA AATCGAGGCA chrIV:7550602-7550682 13 4.34e-04 ATATTATTGT TTCCACGA ATTCAGAGTA chrV:9703035-9703115 34 4.34e-04 TTTGTCGTAA TTCCACGA AATTTCAGAT chrI:469889-469969 5 5.24e-04 TGTA TTTCCAGA CGGGTTGGAA chrII:7924252-7924332 49 5.24e-04 TTAGGTCATG TTTCTAGA GAAACAGCTG chrII:1293865-1293945 27 5.24e-04 CTTCACCTGT TTCTTCGA AAGCAGCTGA chrX:4625239-4625319 12 5.24e-04 TCTCGTCGAC TTCTTCGA ATTTCCATTT chrI:7406091-7406171 28 6.31e-04 CTGAATTTTG TTTCTGGA AAGGTCTGCT chrII:2579634-2579714 38 6.31e-04 AAAATATCTT TTCATAGA ACCGCATGAG chrIV:7301652-7301732 35 6.31e-04 AGCTTTGTGT TTCACAGA AAATATGCAT chrV:9053509-9053589 14 6.31e-04 AATGTCTCAT TTTCCGGA CATTTGCTAG chrIV:6200408-6200488 58 6.31e-04 CAGGTGATTT TTCTGTGA CGTGACATTT chrIV:4036787-4036867 28 7.30e-04 AAACTAGAAA TTTCGAGA AAATTACATG chrX:1830178-1830258 50 7.30e-04 AGAATTTTCT TTTCGAGA ACGTGATGTT chrX:8440520-8440600 13 7.30e-04 TTTCCTATAA TTCATGGA AACACCTGTT chrIV:3772014-3772094 52 7.30e-04 AGCACCTGTC TTTCGAGA AAAACTAAAC chrII:9146263-9146343 28 7.30e-04 AGATGAACCA TTCATGGA AAACCAAGAC chrV:11014917-11014997 60 7.30e-04 TCAACCCGAA TTCTATGA TTACATCAAT chrIV:10893988-10894068 39 8.14e-04 GTCCTGAAAA TTTCAAGA ATAAACCAAG chrV:4870781-4870861 63 9.78e-04 AAATTTTGAT TTCAAAGA AACAAGTATA chrIV:3361733-3361813 60 9.78e-04 ACTTTTAAAG TTTTTAGA AATGTTTATT chrX:15350410-15350490 67 9.78e-04 GAGCACATTT TTTTCAGA ATTAGT chrIV:5102092-5102172 22 9.78e-04 ATTATTTGTA TTTTCAGA TTATCCCCGT chrX:2252573-2252653 32 9.78e-04 AGAACTAAGT TTTTCAGA GGTACAGATG chrIV:8046608-8046688 39 9.78e-04 CAATTTTATT TTTCAGGA ATTGTGGTAA chrV:14210994-14211074 24 9.78e-04 TATATAACTA TTCAAAGA AAGCAGCTGA chrV:8397676-8397756 34 9.78e-04 TTGTGTCAAA TTTTTAGA ATTCAAATTT chrV:7477024-7477104 10 9.78e-04 AGCAATGTT TTCAAAGA AAATGAGAAC chrV:16169248-16169328 29 9.78e-04 AGCTTACTTT TTCAAAGA AAACGTACAG chrIII:9370954-9371034 3 9.78e-04 AT TTTCAGGA TTTACATGAT chrII:7982277-7982357 49 9.78e-04 AAAGCCTGAA TTTTCAGA TAAGGTATAA chrII:8058042-8058122 63 1.05e-03 TTCAAAATAT TTTTTGGA ATTCCCAAGG chrV:17188676-17188756 72 1.05e-03 AAATCACCTG TTTTTGGA G chrII:9759224-9759304 46 1.05e-03 AGGTGATTTT TTTTTGGA AAAAATGCAT chrV:4707805-4707885 45 1.05e-03 GTGATATCAA TTCAAGGA AGTGATACAA chrIV:8681011-8681091 46 1.09e-03 CACATGGGTC TTTTGAGA AAACAAAATG chrV:10276197-10276277 51 1.09e-03 TGGATTTTCA TTTTGAGA GCACAAAATC chrV:4867725-4867805 45 1.17e-03 ATAGCAAGAA TTTTAAGA ACTGAGCCTT chrV:13094545-13094625 71 1.27e-03 GTATAGTTGA TTTCTTGA AC chrII:6313574-6313654 52 1.27e-03 AAAAAGCAAA TTTCTTGA CGTCGATAAA chrIV:12918362-12918442 63 1.27e-03 GCATTTTTGA TTTCTTGA AATTTCCAGG chrI:13008294-13008374 36 1.36e-03 TCAATAAGAT TTCATTGA ATTACTGAAC chrV:18473570-18473650 43 1.36e-03 GGAAATTGAA TTCATTGA ATTGGGGTGT chrX:12206710-12206790 43 1.36e-03 TAAACCATAA TTCATTGA AAAGTGGTCT chrV:20642046-20642126 63 1.36e-03 AAACGTCATT TTTCTCGA AATTCCGCGG chrV:342557-342637 59 1.36e-03 TTTTTTCAGC TTCACTGA TTTTACAGCT chrV:3176211-3176291 38 1.36e-03 ACCTAACTTT TTCACTGA CTGCCTGATA chrII:8554727-8554807 44 1.36e-03 CATCATAGAA TTCACTGA AAACAGATGT chrII:4885045-4885125 9 1.65e-03 ATATCACA TTTTTTGA AACATATTCC chrV:10465669-10465749 61 1.65e-03 CAAGAAAACA TTTCACGA TATACTGACA chrII:13722618-13722698 62 1.65e-03 TTAACTGGAA TTTTTTGA TAGATCACGA chrV:16350200-16350280 55 1.65e-03 GGAAATTAAT TTTTTTGA AAATCACCTG chrI:12613508-12613588 45 1.73e-03 AATTGGGGTT TTTTCCGA ATTGCAGCGG chrX:5927207-5927287 17 1.73e-03 GAAAACTACT TTTTTCGA ATTTTCACGG chrV:6288171-6288251 20 1.73e-03 AAGTAGGCAG TTTTTCGA TTCAGGTGAT chrV:13185540-13185620 50 1.73e-03 GGTTCCGCTT TTTTTCGA ATGCCAGGTG chrX:7888756-7888836 21 1.86e-03 CAGGTGTAAC TTTTGTGA CGAAATGAGG chrV:15841231-15841311 4 2.15e-03 GCT TTTAAAGA TAGAAAAGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:7347581-7347661 3.2e-05 42_[+2]_30 chrV:17448218-17448298 3.2e-05 72_[+2] chrIV:15908412-15908492 3.2e-05 49_[+2]_23 chrV:11033388-11033468 3.2e-05 54_[+2]_18 chrV:17182247-17182327 3.2e-05 56_[+2]_16 chrX:980799-980879 5e-05 68_[+2]_4 chrI:12620665-12620745 5e-05 34_[+2]_38 chrII:12386898-12386978 5e-05 63_[+2]_9 chrV:6778613-6778693 5e-05 67_[+2]_5 chrV:10259404-10259484 5e-05 38_[+2]_34 chrX:13814041-13814121 5e-05 16_[+2]_56 chrIV:15687984-15688064 5e-05 34_[+2]_38 chrX:7886344-7886424 5e-05 54_[+2]_18 chrV:13338826-13338906 6.1e-05 11_[+2]_61 chrIV:1977885-1977965 6.1e-05 10_[+2]_62 chrIV:6511912-6511992 6.1e-05 26_[+2]_46 chrII:12469870-12469950 6.1e-05 42_[+2]_30 chrIV:11893794-11893874 6.1e-05 61_[+2]_11 chrV:2814002-2814082 6.1e-05 44_[+2]_28 chrII:10730843-10730923 8.7e-05 41_[+2]_31 chrII:10852800-10852880 8.7e-05 35_[+2]_37 chrIV:9053531-9053611 8.7e-05 37_[+2]_35 chrIV:11892714-11892794 8.7e-05 13_[+2]_59 chrII:14834755-14834835 8.7e-05 47_[+2]_25 chrIV:4288426-4288506 8.7e-05 36_[+2]_36 chrV:10710492-10710572 8.7e-05 54_[+2]_18 chrV:15309150-15309230 8.7e-05 18_[+2]_54 chrV:15162856-15162936 8.7e-05 29_[+2]_43 chrII:3514796-3514876 8.7e-05 59_[+2]_13 chrV:19583803-19583883 8.7e-05 30_[+2]_42 chrIII:5361062-5361142 8.7e-05 36_[+2]_36 chrV:4240406-4240486 8.7e-05 60_[+2]_12 chrV:8299515-8299595 8.7e-05 58_[+2]_14 chrII:9279175-9279255 8.7e-05 49_[+2]_23 chrV:17030589-17030669 8.7e-05 48_[+2]_24 chrIV:3482719-3482799 8.7e-05 29_[+2]_43 chrI:40195-40275 0.00015 72_[+2] chrI:10756798-10756878 0.00015 56_[+2]_16 chrIV:5580747-5580827 0.00015 44_[+2]_28 chrX:10685617-10685697 0.00015 61_[+2]_11 chrV:11022282-11022362 0.00015 13_[+2]_59 chrIII:2061955-2062035 0.00015 62_[+2]_10 chrII:10132951-10133031 0.00015 51_[+2]_21 chrV:9358937-9359017 0.00015 15_[+2]_57 chrX:13347396-13347476 0.00015 40_[+2]_32 chrIV:8685976-8686056 0.00015 52_[+2]_20 chrX:12951350-12951430 0.00015 69_[+2]_3 chrII:8713421-8713501 0.00015 20_[+2]_52 chrV:17452609-17452689 0.00015 25_[+2]_47 chrV:11458039-11458119 0.00015 33_[+2]_39 chrIV:3471476-3471556 0.00015 20_[+2]_52 chrX:1267542-1267622 0.00015 32_[+2]_40 chrV:15400241-15400321 0.00015 63_[+2]_9 chrII:8722114-8722194 0.00015 31_[+2]_41 chrIV:3453505-3453585 0.00015 38_[+2]_34 chrX:5836686-5836766 0.00015 28_[+2]_44 chrII:10154439-10154519 0.00019 12_[+2]_60 chrX:11875434-11875514 0.00019 47_[+2]_25 chrV:9901299-9901379 0.00019 32_[+2]_40 chrIV:15906242-15906322 0.00019 30_[+2]_42 chrII:12387646-12387726 0.00019 36_[+2]_36 chrIII:2069390-2069470 0.00019 21_[+2]_51 chrV:16497663-16497743 0.00019 60_[+2]_12 chrX:12022655-12022735 0.00019 32_[+2]_40 chrI:2273951-2274031 0.00021 20_[+2]_52 chrI:7285222-7285302 0.00021 3_[+2]_69 chrIV:6403558-6403638 0.00021 16_[+2]_56 chrV:17192424-17192504 0.00021 28_[+2]_44 chrX:4628487-4628567 0.00021 67_[+2]_5 chrV:8978706-8978786 0.00021 41_[+2]_31 chrIV:16287879-16287959 0.00025 32_[+2]_40 chrV:13804907-13804987 0.00025 12_[+2]_60 chrV:9049430-9049510 0.00025 4_[+2]_68 chrI:13006392-13006472 0.00027 32_[+2]_40 chrII:12418166-12418246 0.00027 47_[+2]_25 chrX:994811-994891 0.00027 19_[+2]_53 chrV:9051679-9051759 0.00031 67_[+2]_5 chrIII:6264027-6264107 0.00031 32_[+2]_40 chrV:4794446-4794526 0.00032 58_[+2]_14 chrV:10063809-10063889 0.00032 55_[+2]_17 chrV:8082343-8082423 0.00034 6_[+2]_66 chrII:8396577-8396657 0.00034 1_[+2]_71 chrV:13366604-13366684 0.00043 70_[+2]_2 chrV:5708313-5708393 0.00043 17_[+2]_55 chrV:2816020-2816100 0.00043 42_[+2]_30 chrX:15666619-15666699 0.00043 28_[+2]_44 chrI:3014661-3014741 0.00043 15_[+2]_57 chrIV:7550602-7550682 0.00043 12_[+2]_60 chrV:9703035-9703115 0.00043 33_[+2]_39 chrI:469889-469969 0.00052 4_[+2]_68 chrII:7924252-7924332 0.00052 48_[+2]_24 chrII:1293865-1293945 0.00052 26_[+2]_46 chrX:4625239-4625319 0.00052 11_[+2]_61 chrI:7406091-7406171 0.00063 27_[+2]_45 chrII:2579634-2579714 0.00063 37_[+2]_35 chrIV:7301652-7301732 0.00063 34_[+2]_38 chrV:9053509-9053589 0.00063 13_[+2]_59 chrIV:6200408-6200488 0.00063 57_[+2]_15 chrIV:4036787-4036867 0.00073 27_[+2]_45 chrX:1830178-1830258 0.00073 49_[+2]_23 chrX:8440520-8440600 0.00073 12_[+2]_60 chrIV:3772014-3772094 0.00073 51_[+2]_21 chrII:9146263-9146343 0.00073 27_[+2]_45 chrV:11014917-11014997 0.00073 59_[+2]_13 chrIV:10893988-10894068 0.00081 38_[+2]_34 chrV:4870781-4870861 0.00098 62_[+2]_10 chrIV:3361733-3361813 0.00098 59_[+2]_13 chrX:15350410-15350490 0.00098 66_[+2]_6 chrIV:5102092-5102172 0.00098 21_[+2]_51 chrX:2252573-2252653 0.00098 31_[+2]_41 chrIV:8046608-8046688 0.00098 38_[+2]_34 chrV:14210994-14211074 0.00098 23_[+2]_49 chrV:8397676-8397756 0.00098 33_[+2]_39 chrV:7477024-7477104 0.00098 9_[+2]_63 chrV:16169248-16169328 0.00098 28_[+2]_44 chrIII:9370954-9371034 0.00098 2_[+2]_70 chrII:7982277-7982357 0.00098 48_[+2]_24 chrII:8058042-8058122 0.0011 62_[+2]_10 chrV:17188676-17188756 0.0011 71_[+2]_1 chrII:9759224-9759304 0.0011 45_[+2]_27 chrV:4707805-4707885 0.0011 44_[+2]_28 chrIV:8681011-8681091 0.0011 45_[+2]_27 chrV:10276197-10276277 0.0011 50_[+2]_22 chrV:4867725-4867805 0.0012 44_[+2]_28 chrV:13094545-13094625 0.0013 70_[+2]_2 chrII:6313574-6313654 0.0013 51_[+2]_21 chrIV:12918362-12918442 0.0013 62_[+2]_10 chrI:13008294-13008374 0.0014 35_[+2]_37 chrV:18473570-18473650 0.0014 42_[+2]_30 chrX:12206710-12206790 0.0014 42_[+2]_30 chrV:20642046-20642126 0.0014 62_[+2]_10 chrV:342557-342637 0.0014 58_[+2]_14 chrV:3176211-3176291 0.0014 37_[+2]_35 chrII:8554727-8554807 0.0014 43_[+2]_29 chrII:4885045-4885125 0.0016 8_[+2]_64 chrV:10465669-10465749 0.0016 60_[+2]_12 chrII:13722618-13722698 0.0016 61_[+2]_11 chrV:16350200-16350280 0.0016 54_[+2]_18 chrI:12613508-12613588 0.0017 44_[+2]_28 chrX:5927207-5927287 0.0017 16_[+2]_56 chrV:6288171-6288251 0.0017 19_[+2]_53 chrV:13185540-13185620 0.0017 49_[+2]_23 chrX:7888756-7888836 0.0019 20_[+2]_52 chrV:15841231-15841311 0.0021 3_[+2]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTCYHRGA width=8 seqs=144 chrI:7347581-7347661 ( 43) TTCCCAGA 1 chrV:17448218-17448298 ( 73) TTCCCAGA 1 chrIV:15908412-15908492 ( 50) TTCCTAGA 1 chrV:11033388-11033468 ( 55) TTCCCAGA 1 chrV:17182247-17182327 ( 57) TTCCCAGA 1 chrX:980799-980879 ( 69) TTCCCGGA 1 chrI:12620665-12620745 ( 35) TTCCTGGA 1 chrII:12386898-12386978 ( 64) TTCCTGGA 1 chrV:6778613-6778693 ( 68) TTCCTGGA 1 chrV:10259404-10259484 ( 39) TTCCTGGA 1 chrX:13814041-13814121 ( 17) TTCCTGGA 1 chrIV:15687984-15688064 ( 35) TTCCTGGA 1 chrX:7886344-7886424 ( 55) TTCCTGGA 1 chrV:13338826-13338906 ( 12) TTCCGAGA 1 chrIV:1977885-1977965 ( 11) TTCCGAGA 1 chrIV:6511912-6511992 ( 27) TTCCGAGA 1 chrII:12469870-12469950 ( 43) TTCCGAGA 1 chrIV:11893794-11893874 ( 62) TTCCGAGA 1 chrV:2814002-2814082 ( 45) TTCCGAGA 1 chrII:10730843-10730923 ( 42) TTCCAAGA 1 chrII:10852800-10852880 ( 36) TTCCAAGA 1 chrIV:9053531-9053611 ( 38) TTCCAAGA 1 chrIV:11892714-11892794 ( 14) TTCCAAGA 1 chrII:14834755-14834835 ( 48) TTCCAAGA 1 chrIV:4288426-4288506 ( 37) TTCCAAGA 1 chrV:10710492-10710572 ( 55) TTCCGGGA 1 chrV:15309150-15309230 ( 19) TTCCAAGA 1 chrV:15162856-15162936 ( 30) TTCCAAGA 1 chrII:3514796-3514876 ( 60) TTCCAAGA 1 chrV:19583803-19583883 ( 31) TTCCGGGA 1 chrIII:5361062-5361142 ( 37) TTCCGGGA 1 chrV:4240406-4240486 ( 61) TTCCAAGA 1 chrV:8299515-8299595 ( 59) TTCCAAGA 1 chrII:9279175-9279255 ( 50) TTCCAAGA 1 chrV:17030589-17030669 ( 49) TTCCAAGA 1 chrIV:3482719-3482799 ( 30) TTCCAAGA 1 chrI:40195-40275 ( 73) TTCTTAGA 1 chrI:10756798-10756878 ( 57) TTCTCAGA 1 chrIV:5580747-5580827 ( 45) TTCTCAGA 1 chrX:10685617-10685697 ( 62) TTCCAGGA 1 chrV:11022282-11022362 ( 14) TTCTCAGA 1 chrIII:2061955-2062035 ( 63) TTCTCAGA 1 chrII:10132951-10133031 ( 52) TTCTTAGA 1 chrV:9358937-9359017 ( 16) TTCTCAGA 1 chrX:13347396-13347476 ( 41) TTCCAGGA 1 chrIV:8685976-8686056 ( 53) TTCTTAGA 1 chrX:12951350-12951430 ( 70) TTCTCAGA 1 chrII:8713421-8713501 ( 21) TTCCAGGA 1 chrV:17452609-17452689 ( 26) TTCTTAGA 1 chrV:11458039-11458119 ( 34) TTCTTAGA 1 chrIV:3471476-3471556 ( 21) TTCTCAGA 1 chrX:1267542-1267622 ( 33) TTCTTAGA 1 chrV:15400241-15400321 ( 64) TTCCAGGA 1 chrII:8722114-8722194 ( 32) TTCTTAGA 1 chrIV:3453505-3453585 ( 39) TTCTCAGA 1 chrX:5836686-5836766 ( 29) TTCTTAGA 1 chrII:10154439-10154519 ( 13) TTCTTGGA 1 chrX:11875434-11875514 ( 48) TTCTTGGA 1 chrV:9901299-9901379 ( 33) TTCTTGGA 1 chrIV:15906242-15906322 ( 31) TTCTTGGA 1 chrII:12387646-12387726 ( 37) TTCTTGGA 1 chrIII:2069390-2069470 ( 22) TTCTCGGA 1 chrV:16497663-16497743 ( 61) TTCTCGGA 1 chrX:12022655-12022735 ( 33) TTCTTGGA 1 chrI:2273951-2274031 ( 21) TTCTGAGA 1 chrI:7285222-7285302 ( 4) TTCTGAGA 1 chrIV:6403558-6403638 ( 17) TTCTGAGA 1 chrV:17192424-17192504 ( 29) TTCTGAGA 1 chrX:4628487-4628567 ( 68) TTCTGAGA 1 chrV:8978706-8978786 ( 42) TTCTGAGA 1 chrIV:16287879-16287959 ( 33) TTCTAAGA 1 chrV:13804907-13804987 ( 13) TTCTAAGA 1 chrV:9049430-9049510 ( 5) TTCTGGGA 1 chrI:13006392-13006472 ( 33) TTCTAGGA 1 chrII:12418166-12418246 ( 48) TTCTAGGA 1 chrX:994811-994891 ( 20) TTCTAGGA 1 chrV:9051679-9051759 ( 68) TTCCTTGA 1 chrIII:6264027-6264107 ( 33) TTCCCTGA 1 chrV:4794446-4794526 ( 59) TTCCCCGA 1 chrV:10063809-10063889 ( 56) TTCCTCGA 1 chrV:8082343-8082423 ( 7) TTCCGTGA 1 chrII:8396577-8396657 ( 2) TTCCGTGA 1 chrV:13366604-13366684 ( 71) TTCTTTGA 1 chrV:5708313-5708393 ( 18) TTCTCTGA 1 chrV:2816020-2816100 ( 43) TTCTTTGA 1 chrX:15666619-15666699 ( 29) TTCTTTGA 1 chrI:3014661-3014741 ( 16) TTCTCTGA 1 chrIV:7550602-7550682 ( 13) TTCCACGA 1 chrV:9703035-9703115 ( 34) TTCCACGA 1 chrI:469889-469969 ( 5) TTTCCAGA 1 chrII:7924252-7924332 ( 49) TTTCTAGA 1 chrII:1293865-1293945 ( 27) TTCTTCGA 1 chrX:4625239-4625319 ( 12) TTCTTCGA 1 chrI:7406091-7406171 ( 28) TTTCTGGA 1 chrII:2579634-2579714 ( 38) TTCATAGA 1 chrIV:7301652-7301732 ( 35) TTCACAGA 1 chrV:9053509-9053589 ( 14) TTTCCGGA 1 chrIV:6200408-6200488 ( 58) TTCTGTGA 1 chrIV:4036787-4036867 ( 28) TTTCGAGA 1 chrX:1830178-1830258 ( 50) TTTCGAGA 1 chrX:8440520-8440600 ( 13) TTCATGGA 1 chrIV:3772014-3772094 ( 52) TTTCGAGA 1 chrII:9146263-9146343 ( 28) TTCATGGA 1 chrV:11014917-11014997 ( 60) TTCTATGA 1 chrIV:10893988-10894068 ( 39) TTTCAAGA 1 chrV:4870781-4870861 ( 63) TTCAAAGA 1 chrIV:3361733-3361813 ( 60) TTTTTAGA 1 chrX:15350410-15350490 ( 67) TTTTCAGA 1 chrIV:5102092-5102172 ( 22) TTTTCAGA 1 chrX:2252573-2252653 ( 32) TTTTCAGA 1 chrIV:8046608-8046688 ( 39) TTTCAGGA 1 chrV:14210994-14211074 ( 24) TTCAAAGA 1 chrV:8397676-8397756 ( 34) TTTTTAGA 1 chrV:7477024-7477104 ( 10) TTCAAAGA 1 chrV:16169248-16169328 ( 29) TTCAAAGA 1 chrIII:9370954-9371034 ( 3) TTTCAGGA 1 chrII:7982277-7982357 ( 49) TTTTCAGA 1 chrII:8058042-8058122 ( 63) TTTTTGGA 1 chrV:17188676-17188756 ( 72) TTTTTGGA 1 chrII:9759224-9759304 ( 46) TTTTTGGA 1 chrV:4707805-4707885 ( 45) TTCAAGGA 1 chrIV:8681011-8681091 ( 46) TTTTGAGA 1 chrV:10276197-10276277 ( 51) TTTTGAGA 1 chrV:4867725-4867805 ( 45) TTTTAAGA 1 chrV:13094545-13094625 ( 71) TTTCTTGA 1 chrII:6313574-6313654 ( 52) TTTCTTGA 1 chrIV:12918362-12918442 ( 63) TTTCTTGA 1 chrI:13008294-13008374 ( 36) TTCATTGA 1 chrV:18473570-18473650 ( 43) TTCATTGA 1 chrX:12206710-12206790 ( 43) TTCATTGA 1 chrV:20642046-20642126 ( 63) TTTCTCGA 1 chrV:342557-342637 ( 59) TTCACTGA 1 chrV:3176211-3176291 ( 38) TTCACTGA 1 chrII:8554727-8554807 ( 44) TTCACTGA 1 chrII:4885045-4885125 ( 9) TTTTTTGA 1 chrV:10465669-10465749 ( 61) TTTCACGA 1 chrII:13722618-13722698 ( 62) TTTTTTGA 1 chrV:16350200-16350280 ( 55) TTTTTTGA 1 chrI:12613508-12613588 ( 45) TTTTCCGA 1 chrX:5927207-5927287 ( 17) TTTTTCGA 1 chrV:6288171-6288251 ( 20) TTTTTCGA 1 chrV:13185540-13185620 ( 50) TTTTTCGA 1 chrX:7888756-7888836 ( 21) TTTTGTGA 1 chrV:15841231-15841311 ( 4) TTTAAAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.7738 E= 1.7e-054 -1381 -1381 -1381 161 -1381 -1381 -1381 161 -1381 203 -1381 -39 -148 125 -1381 47 -28 18 -4 14 67 -114 53 -97 -1381 -1381 249 -1381 169 -1381 -1381 -1381 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 144 E= 1.7e-054 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.750000 0.000000 0.250000 0.111111 0.437500 0.000000 0.451389 0.256944 0.208333 0.173611 0.361111 0.493056 0.083333 0.256944 0.166667 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYHRGA MEME-2 regular expression -------------------------------------------------------------------------------- TT[CT][TC][TAC][AG]GA -------------------------------------------------------------------------------- Time 8.14 secs. ******************************************************************************** ******************************************************************************** MOTIF CACCTGCT MEME-3 width = 8 sites = 12 llr = 125 E-value = 3.9e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a:::::: pos.-specific C a:89::9: probability G :::11a1: matrix T ::3:9::a bits 2.5 * * 2.2 * * 2.0 * * ** 1.7 ** * ** Relative 1.5 **** *** Entropy 1.2 ******** (15.0 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CACCTGCT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrII:12969636-12969716 8 6.78e-06 GCCAACT CACCTGCT CTTAATTTCA chrV:20354146-20354226 72 6.78e-06 CAGTTGGCAG CACCTGCT G chrV:18827533-18827613 69 6.78e-06 TAAAAATTTC CACCTGCT TTCC chrV:20775566-20775646 17 6.78e-06 CCTTCAAAAT CACCTGCT CTGCTTTACA chrX:5836686-5836766 21 6.78e-06 ACTAAAGAAA CACCTGCT TTCTTAGAAT chrIV:592541-592621 34 6.78e-06 ATTTTACGTT CACCTGCT CGTTTTCTCG chrII:9759224-9759304 61 1.88e-05 GGAAAAAATG CATCTGCT TCGCTCTTAA chrIII:9478976-9479056 39 1.88e-05 TTCTAAAATT CATCTGCT CATAATTTCG chrV:6003606-6003686 18 1.88e-05 ATAGGAAAAT CATCTGCT GGGCAGCTGT chrV:15858442-15858522 38 2.25e-05 TCGGAAAATC CACCGGCT CTTTGTTTGA chrIV:8179172-8179252 36 3.57e-05 CCTCAGTTTG CACCTGGT TTCTTTACCT chrIV:7532535-7532615 4 3.57e-05 AAT CACGTGCT TCATTTCATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:12969636-12969716 6.8e-06 7_[+3]_65 chrV:20354146-20354226 6.8e-06 71_[+3]_1 chrV:18827533-18827613 6.8e-06 68_[+3]_4 chrV:20775566-20775646 6.8e-06 16_[+3]_56 chrX:5836686-5836766 6.8e-06 20_[+3]_52 chrIV:592541-592621 6.8e-06 33_[+3]_39 chrII:9759224-9759304 1.9e-05 60_[+3]_12 chrIII:9478976-9479056 1.9e-05 38_[+3]_34 chrV:6003606-6003686 1.9e-05 17_[+3]_55 chrV:15858442-15858522 2.3e-05 37_[+3]_35 chrIV:8179172-8179252 3.6e-05 35_[+3]_37 chrIV:7532535-7532615 3.6e-05 3_[+3]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACCTGCT width=8 seqs=12 chrII:12969636-12969716 ( 8) CACCTGCT 1 chrV:20354146-20354226 ( 72) CACCTGCT 1 chrV:18827533-18827613 ( 69) CACCTGCT 1 chrV:20775566-20775646 ( 17) CACCTGCT 1 chrX:5836686-5836766 ( 21) CACCTGCT 1 chrIV:592541-592621 ( 34) CACCTGCT 1 chrII:9759224-9759304 ( 61) CATCTGCT 1 chrIII:9478976-9479056 ( 39) CATCTGCT 1 chrV:6003606-6003686 ( 18) CATCTGCT 1 chrV:15858442-15858522 ( 38) CACCGGCT 1 chrIV:8179172-8179252 ( 36) CACCTGGT 1 chrIV:7532535-7532615 ( 4) CACGTGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2284 E= 3.9e+000 -1023 244 -1023 -1023 168 -1023 -1023 -1023 -1023 203 -1023 -39 -1023 231 -109 -1023 -1023 -1023 -109 149 -1023 -1023 249 -1023 -1023 231 -109 -1023 -1023 -1023 -1023 161 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 3.9e+000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.000000 0.916667 0.083333 0.000000 0.000000 0.000000 0.083333 0.916667 0.000000 0.000000 1.000000 0.000000 0.000000 0.916667 0.083333 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCTGCT MEME-3 regular expression -------------------------------------------------------------------------------- CA[CT]CTGCT -------------------------------------------------------------------------------- Time 11.23 secs. ******************************************************************************** ******************************************************************************** MOTIF ACAGGTGW MEME-4 width = 8 sites = 15 llr = 148 E-value = 6.8e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 Description -------------------------------------------------------------------------------- Simplified A 7:a::::5 pos.-specific C 1a:::::2 probability G 2::aa:a: matrix T :::::a:3 bits 2.5 * ** * 2.2 * ** * 2.0 * ** * 1.7 **** * Relative 1.5 ****** Entropy 1.2 ****** (14.3 bits) 1.0 ****** 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel ACAGGTGA consensus G T sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIII:180206-180286 41 1.02e-05 ATTTGTTGAA ACAGGTGA AAAAGAAACA chrII:2579634-2579714 68 1.02e-05 AAGAATTTCA ACAGGTGA AAGTT chrV:9897084-9897164 10 1.02e-05 TTCGTAAAA ACAGGTGA TTATGTGAAG chrV:12031162-12031242 13 1.02e-05 TTTGGCAGAA ACAGGTGA TAACGTTTTT chrV:6003606-6003686 61 1.02e-05 CACTCAAAAC ACAGGTGA GTCTGAAAAA chrII:9139331-9139411 11 1.02e-05 TAGATAAGAA ACAGGTGA AATTAGATAG chrI:4200366-4200446 69 1.62e-05 GATTCCCGAG ACAGGTGC AATT chrV:19329559-19329639 10 1.62e-05 TATCATCCG ACAGGTGC GACAATCACT chrX:5927207-5927287 1 2.21e-05 . GCAGGTGA AAACTACTTT chrIV:5102092-5102172 43 3.28e-05 TCCCCGTTTC ACAGGTGT ATATTGAAAG chrX:10568053-10568133 25 3.28e-05 ATTAGATGAG ACAGGTGT TTCAGTACAT chrX:1830178-1830258 2 4.23e-05 C GCAGGTGC ATTTTTGGTG chrV:20351227-20351307 61 4.23e-05 CATCAGAATA CCAGGTGA TTTTGGCCGT chrV:6288171-6288251 54 4.85e-05 TAAATTTCAG GCAGGTGT CTTAAAATAA chrX:11375729-11375809 26 5.84e-05 ATTTGCGTTT CCAGGTGT TTTTGCCTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:180206-180286 1e-05 40_[+4]_32 chrII:2579634-2579714 1e-05 67_[+4]_5 chrV:9897084-9897164 1e-05 9_[+4]_63 chrV:12031162-12031242 1e-05 12_[+4]_60 chrV:6003606-6003686 1e-05 60_[+4]_12 chrII:9139331-9139411 1e-05 10_[+4]_62 chrI:4200366-4200446 1.6e-05 68_[+4]_4 chrV:19329559-19329639 1.6e-05 9_[+4]_63 chrX:5927207-5927287 2.2e-05 [+4]_72 chrIV:5102092-5102172 3.3e-05 42_[+4]_30 chrX:10568053-10568133 3.3e-05 24_[+4]_48 chrX:1830178-1830258 4.2e-05 1_[+4]_71 chrV:20351227-20351307 4.2e-05 60_[+4]_12 chrV:6288171-6288251 4.8e-05 53_[+4]_19 chrX:11375729-11375809 5.8e-05 25_[+4]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACAGGTGW width=8 seqs=15 chrIII:180206-180286 ( 41) ACAGGTGA 1 chrII:2579634-2579714 ( 68) ACAGGTGA 1 chrV:9897084-9897164 ( 10) ACAGGTGA 1 chrV:12031162-12031242 ( 13) ACAGGTGA 1 chrV:6003606-6003686 ( 61) ACAGGTGA 1 chrII:9139331-9139411 ( 11) ACAGGTGA 1 chrI:4200366-4200446 ( 69) ACAGGTGC 1 chrV:19329559-19329639 ( 10) ACAGGTGC 1 chrX:5927207-5927287 ( 1) GCAGGTGA 1 chrIV:5102092-5102172 ( 43) ACAGGTGT 1 chrX:10568053-10568133 ( 25) ACAGGTGT 1 chrX:1830178-1830258 ( 2) GCAGGTGC 1 chrV:20351227-20351307 ( 61) CCAGGTGA 1 chrV:6288171-6288251 ( 54) GCAGGTGT 1 chrX:11375729-11375809 ( 26) CCAGGTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.9222 E= 6.8e+000 110 -47 17 -1055 -1055 244 -1055 -1055 168 -1055 -1055 -1055 -1055 -1055 249 -1055 -1055 -1055 249 -1055 -1055 -1055 -1055 161 -1055 -1055 249 -1055 78 12 -1055 -29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 15 E= 6.8e+000 0.666667 0.133333 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.533333 0.200000 0.000000 0.266667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAGGTGW MEME-4 regular expression -------------------------------------------------------------------------------- [AG]CAGGTG[ATC] -------------------------------------------------------------------------------- Time 14.32 secs. ******************************************************************************** ******************************************************************************** MOTIF YCTGAAAA MEME-5 width = 8 sites = 26 llr = 227 E-value = 5.1e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2:::8aaa pos.-specific C 5a:::::: probability G ::2a2::: matrix T 4:8::::: bits 2.5 * 2.2 * * 2.0 * * 1.7 * * *** Relative 1.5 * * *** Entropy 1.2 ******* (12.6 bits) 1.0 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCTGAAAA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrV:4794446-4794526 3 1.84e-05 TT CCTGAAAA TTGGGAGTTG chrIV:10893988-10894068 31 1.84e-05 TTGTAAATGT CCTGAAAA TTTCAAGAAT chrIII:2061955-2062035 52 1.84e-05 CCCTTCACTG CCTGAAAA TGTTTCTCAG chrII:2700366-2700446 39 1.84e-05 TATTTGGGTT CCTGAAAA CCTGGCCTAA chrV:10063809-10063889 13 1.84e-05 ATTTTAAATT CCTGAAAA ATGCAGAAGA chrIV:6058783-6058863 72 1.84e-05 TTCCACAAAT CCTGAAAA A chrI:13008294-13008374 54 5.12e-05 ATTACTGAAC TCTGAAAA TTCAGATTTC chrII:13722618-13722698 26 5.12e-05 TTTCACCTGT TCTGAAAA CACCATTTGA chrV:9358937-9359017 72 5.12e-05 ACACTTGATA TCTGAAAA T chrV:20775566-20775646 47 5.12e-05 AAAGACACTT TCTGAAAA TGGTAAAAGT chrII:7709661-7709741 34 5.12e-05 GTGGGTTGTT TCTGAAAA AAAAACGAAT chrV:17543247-17543327 41 5.12e-05 aaatactagt tctgaaaa aaattttCAA chrV:6003606-6003686 70 5.12e-05 CACAGGTGAG TCTGAAAA AAT chrX:15350410-15350490 27 7.18e-05 ACACCTGTTG CCGGAAAA AAATCAGCAC chrII:10132951-10133031 4 7.18e-05 GCA CCTGGAAA GCATATCTAT chrI:9443487-9443567 40 7.18e-05 AACAGGTCTA CCTGGAAA GGAAACAGGT chrX:4625239-4625319 46 7.18e-05 GTTGCAAGTG CCTGGAAA CAAAAAATTC chrV:13804907-13804987 70 7.18e-05 GTTTATGATT CCGGAAAA GCA chrII:10730843-10730923 51 1.03e-04 GTTCCAAGAA ACTGAAAA ATCATCAAAT chrII:8713421-8713501 51 1.03e-04 AAATTTTGAG ACTGAAAA TGGAGCAAGC chrIV:2972135-2972215 20 1.03e-04 TTTAGCATTT ACTGAAAA ATATCAAAAT chrV:8978706-8978786 68 1.03e-04 CAGGCTTTAT ACTGAAAA TGTTT chrV:6857209-6857289 30 1.40e-04 AGACACGTTG TCTGGAAA ACTGTTTTTG chrV:15858442-15858522 28 1.40e-04 ATTTTGTCAG TCGGAAAA TCCACCGGCT chrV:17396689-17396769 52 1.40e-04 TAATAAATCT TCGGAAAA ATAATAATTA chrV:17192424-17192504 15 2.08e-04 AGTGAGTTTT CGTGAAAA CAAGCTTTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:4794446-4794526 1.8e-05 2_[+5]_70 chrIV:10893988-10894068 1.8e-05 30_[+5]_42 chrIII:2061955-2062035 1.8e-05 51_[+5]_21 chrII:2700366-2700446 1.8e-05 38_[+5]_34 chrV:10063809-10063889 1.8e-05 12_[+5]_60 chrIV:6058783-6058863 1.8e-05 71_[+5]_1 chrI:13008294-13008374 5.1e-05 53_[+5]_19 chrII:13722618-13722698 5.1e-05 25_[+5]_47 chrV:9358937-9359017 5.1e-05 71_[+5]_1 chrV:20775566-20775646 5.1e-05 46_[+5]_26 chrII:7709661-7709741 5.1e-05 33_[+5]_39 chrV:17543247-17543327 5.1e-05 40_[+5]_32 chrV:6003606-6003686 5.1e-05 69_[+5]_3 chrX:15350410-15350490 7.2e-05 26_[+5]_46 chrII:10132951-10133031 7.2e-05 3_[+5]_69 chrI:9443487-9443567 7.2e-05 39_[+5]_33 chrX:4625239-4625319 7.2e-05 45_[+5]_27 chrV:13804907-13804987 7.2e-05 69_[+5]_3 chrII:10730843-10730923 0.0001 50_[+5]_22 chrII:8713421-8713501 0.0001 50_[+5]_22 chrIV:2972135-2972215 0.0001 19_[+5]_53 chrV:8978706-8978786 0.0001 67_[+5]_5 chrV:6857209-6857289 0.00014 29_[+5]_43 chrV:15858442-15858522 0.00014 27_[+5]_45 chrV:17396689-17396769 0.00014 51_[+5]_21 chrV:17192424-17192504 0.00021 14_[+5]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YCTGAAAA width=8 seqs=26 chrV:4794446-4794526 ( 3) CCTGAAAA 1 chrIV:10893988-10894068 ( 31) CCTGAAAA 1 chrIII:2061955-2062035 ( 52) CCTGAAAA 1 chrII:2700366-2700446 ( 39) CCTGAAAA 1 chrV:10063809-10063889 ( 13) CCTGAAAA 1 chrIV:6058783-6058863 ( 72) CCTGAAAA 1 chrI:13008294-13008374 ( 54) TCTGAAAA 1 chrII:13722618-13722698 ( 26) TCTGAAAA 1 chrV:9358937-9359017 ( 72) TCTGAAAA 1 chrV:20775566-20775646 ( 47) TCTGAAAA 1 chrII:7709661-7709741 ( 34) TCTGAAAA 1 chrV:17543247-17543327 ( 41) TCTGAAAA 1 chrV:6003606-6003686 ( 70) TCTGAAAA 1 chrX:15350410-15350490 ( 27) CCGGAAAA 1 chrII:10132951-10133031 ( 4) CCTGGAAA 1 chrI:9443487-9443567 ( 40) CCTGGAAA 1 chrX:4625239-4625319 ( 46) CCTGGAAA 1 chrV:13804907-13804987 ( 70) CCGGAAAA 1 chrII:10730843-10730923 ( 51) ACTGAAAA 1 chrII:8713421-8713501 ( 51) ACTGAAAA 1 chrIV:2972135-2972215 ( 20) ACTGAAAA 1 chrV:8978706-8978786 ( 68) ACTGAAAA 1 chrV:6857209-6857289 ( 30) TCTGGAAA 1 chrV:15858442-15858522 ( 28) TCGGAAAA 1 chrV:17396689-17396769 ( 52) TCGGAAAA 1 chrV:17192424-17192504 ( 15) CGTGAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.98426 E= 5.1e+000 -101 133 -1134 23 -1134 238 -221 -1134 -1134 -1134 -21 137 -1134 -1134 249 -1134 144 -1134 -21 -1134 168 -1134 -1134 -1134 168 -1134 -1134 -1134 168 -1134 -1134 -1134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 5.1e+000 0.153846 0.461538 0.000000 0.384615 0.000000 0.961538 0.038462 0.000000 0.000000 0.000000 0.153846 0.846154 0.000000 0.000000 1.000000 0.000000 0.846154 0.000000 0.153846 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGAAAA MEME-5 regular expression -------------------------------------------------------------------------------- [CT]CTGAAAA -------------------------------------------------------------------------------- Time 17.69 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:12022655-12022735 4.34e-03 80 chrIV:3482719-3482799 5.97e-03 29_[+2(8.69e-05)]_43 chrV:10276197-10276277 2.77e-03 34_[+1(6.35e-06)]_38 chrV:11201985-11202065 2.32e-04 80 chrX:7886344-7886424 4.24e-03 54_[+2(5.01e-05)]_18 chrV:17030589-17030669 9.54e-04 6_[+1(4.88e-05)]_34_[+2(8.69e-05)]_\ 24 chrV:9049430-9049510 7.63e-02 80 chrIV:15687984-15688064 1.39e-06 2_[+4(1.02e-05)]_24_[+2(5.01e-05)]_\ 38 chrIV:592541-592621 8.33e-06 15_[+4(2.21e-05)]_10_[+3(6.78e-06)]_\ 39 chrV:4707805-4707885 3.43e-04 65_[+4(6.42e-05)]_7 chrV:7501353-7501433 7.80e-01 80 chrIV:6200408-6200488 2.21e-03 46_[+4(4.23e-05)]_26 chrII:9279175-9279255 1.08e-04 49_[+2(8.69e-05)]_23 chrX:5836686-5836766 2.08e-05 20_[+3(6.78e-06)]_9_[+1(4.88e-05)]_\ 35 chrIV:3453505-3453585 7.92e-05 80 chrV:16497663-16497743 6.93e-05 43_[+3(3.57e-05)]_29 chrII:8610744-8610824 5.82e-04 53_[+4(1.62e-05)]_19 chrII:8554727-8554807 4.68e-05 80 chrV:15850571-15850651 2.44e-03 51_[+4(2.21e-05)]_21 chrV:215856-215936 2.82e-02 80 chrV:11014917-11014997 2.24e-05 24_[+1(2.51e-05)]_48 chrII:8722114-8722194 1.79e-04 58_[+1(4.88e-05)]_14 chrII:9139331-9139411 6.53e-04 10_[+4(1.02e-05)]_62 chrV:17182247-17182327 3.87e-06 34_[+3(6.78e-06)]_14_[+2(3.18e-05)]_\ 16 chrV:3176211-3176291 7.50e-03 61_[+1(4.88e-05)]_11 chrV:6003606-6003686 3.61e-07 17_[+3(1.88e-05)]_1_[+1(7.45e-05)]_\ 26_[+4(1.02e-05)]_1_[+5(5.12e-05)]_3 chrV:15400241-15400321 2.65e-05 22_[+3(6.78e-06)]_50 chrIV:6058783-6058863 1.80e-04 71_[+5(1.84e-05)]_1 chrV:16388361-16388441 2.00e-01 80 chrI:7641696-7641776 5.82e-01 80 chrIV:14536066-14536146 1.38e-04 48_[+1(1.24e-05)]_24 chrX:1267542-1267622 6.34e-05 51_[+3(1.88e-05)]_21 chrV:8978706-8978786 3.87e-06 19_[+1(2.51e-05)]_53 chrIV:7353730-7353810 4.71e-02 80 chrX:4562438-4562518 2.88e-03 43_[+3(6.78e-06)]_29 chrV:13804907-13804987 2.03e-05 30_[+1(9.14e-05)]_31_[+5(7.18e-05)]_\ 3 chrV:2814002-2814082 1.73e-05 11_[+4(2.21e-05)]_25_[+2(6.12e-05)]_\ 28 chrV:10063809-10063889 9.74e-05 12_[+5(1.84e-05)]_60 chrX:13814041-13814121 4.79e-05 16_[+2(5.01e-05)]_10_[+3(1.88e-05)]_\ 38 chrX:10919640-10919720 5.30e-01 80 chrV:17396689-17396769 7.52e-02 80 chrIV:16287879-16287959 1.08e-01 80 chrV:342557-342637 7.26e-04 69_[+1(7.45e-05)]_3 chrII:4851090-4851170 1.82e-02 80 chrII:2700366-2700446 9.29e-06 20_[+4(2.21e-05)]_10_[+5(1.84e-05)]_\ 34 chrV:15849691-15849771 4.23e-02 80 chrIV:3471476-3471556 3.01e-04 41_[+4(7.50e-05)]_31 chrIV:11893794-11893874 1.42e-04 48_[+1(9.14e-05)]_5_[+2(6.12e-05)]_\ 11 chrX:3894171-3894251 8.12e-04 24_[+4(2.21e-05)]_48 chrX:4628487-4628567 5.81e-05 3_[+1(2.51e-05)]_69 chrX:16470681-16470761 7.05e-04 56_[+4(2.21e-05)]_16 chrII:5776424-5776504 2.66e-02 80 chrV:17543247-17543327 1.54e-01 40_[+5(5.12e-05)]_32 chrV:10259404-10259484 1.42e-03 38_[+2(5.01e-05)]_34 chrV:11458039-11458119 1.07e-02 80 chrV:9053509-9053589 1.22e-04 41_[+4(6.42e-05)]_31 chrV:16350200-16350280 8.56e-03 80 chrV:8299515-8299595 1.78e-04 24_[+4(1.62e-05)]_26_[+2(8.69e-05)]_\ 14 chrV:12719871-12719951 6.61e-01 80 chrII:7982277-7982357 6.99e-02 80 chrX:994811-994891 6.31e-02 80 chrIII:9370954-9371034 2.89e-03 80 chrII:10150686-10150766 2.19e-03 69_[+4(4.23e-05)]_3 chrV:4240406-4240486 1.02e-03 60_[+2(8.69e-05)]_12 chrV:16169248-16169328 1.36e-04 42_[+4(1.02e-05)]_30 chrV:13185540-13185620 5.20e-03 60_[+4(4.23e-05)]_12 chrV:10998431-10998511 1.58e-02 80 chrIII:2069390-2069470 6.98e-04 41_[+3(6.56e-05)]_31 chrV:7477024-7477104 2.10e-03 24_[+1(9.14e-05)]_48 chrIV:8682023-8682103 1.01e-02 20_[+1(2.51e-05)]_52 chrV:6288171-6288251 5.74e-04 28_[+4(7.50e-05)]_17_[+4(4.85e-05)]_\ 19 chrIII:5361062-5361142 7.18e-02 36_[+2(8.69e-05)]_36 chrV:19329559-19329639 4.50e-04 9_[+4(1.62e-05)]_63 chrV:12433922-12434002 2.87e-03 80 chrV:20642046-20642126 3.16e-01 80 chrV:12031162-12031242 7.35e-05 12_[+4(1.02e-05)]_60 chrV:19583803-19583883 1.49e-01 30_[+2(8.69e-05)]_42 chrIV:8681011-8681091 3.81e-02 80 chrV:17452609-17452689 3.68e-05 1_[+1(2.51e-05)]_56_[+3(6.56e-05)]_\ 7 chrIII:9478976-9479056 2.87e-05 38_[+3(1.88e-05)]_20_[+4(1.02e-05)]_\ 6 chrII:7709661-7709741 2.87e-03 33_[+5(5.12e-05)]_39 chrV:9703035-9703115 1.00e-03 51_[+1(4.88e-05)]_21 chrV:8263780-8263860 2.26e-02 34_[+1(7.45e-05)]_38 chrII:3514796-3514876 3.31e-04 59_[+2(8.69e-05)]_13 chrII:5138309-5138389 6.02e-02 80 chrII:3706504-3706584 6.44e-03 80 chrX:4561611-4561691 2.13e-02 80 chrV:15162856-15162936 5.74e-02 29_[+2(8.69e-05)]_43 chrV:20775566-20775646 4.18e-05 16_[+3(6.78e-06)]_22_[+5(5.12e-05)]_\ 26 chrII:12387646-12387726 1.39e-05 20_[+4(1.02e-05)]_52 chrIII:6264027-6264107 8.74e-04 16_[+4(4.23e-05)]_56 chrV:20351227-20351307 7.65e-05 21_[+1(2.51e-05)]_31_[+4(4.23e-05)]_\ 12 chrII:8396577-8396657 4.03e-04 31_[+4(6.42e-05)]_41 chrV:15309150-15309230 1.92e-01 18_[+2(8.69e-05)]_54 chrV:13427337-13427417 2.54e-01 80 chrV:4002612-4002692 8.01e-04 80 chrV:8397676-8397756 3.69e-04 80 chrV:15841231-15841311 5.18e-04 20_[+4(2.21e-05)]_52 chrV:15721590-15721670 2.76e-01 80 chrV:10349075-10349155 1.45e-01 80 chrV:11033388-11033468 2.97e-03 54_[+2(3.18e-05)]_18 chrV:10710492-10710572 1.27e-05 54_[+2(8.69e-05)]_18 chrV:18827533-18827613 3.03e-04 11_[+3(3.57e-05)]_49_[+3(6.78e-06)]_\ 4 chrX:4625239-4625319 2.81e-05 45_[+5(7.18e-05)]_27 chrII:1293865-1293945 8.68e-05 35_[+1(1.24e-05)]_37 chrV:20354146-20354226 1.76e-05 16_[+1(6.35e-06)]_47_[+3(6.78e-06)]_\ 1 chrII:5775699-5775779 1.63e-03 50_[+1(9.14e-05)]_22 chrII:6216782-6216862 1.80e-04 32_[+3(6.78e-06)]_40 chrIV:12918362-12918442 6.35e-04 5_[+4(1.02e-05)]_67 chrV:6778613-6778693 1.20e-02 67_[+2(5.01e-05)]_5 chrIV:4288426-4288506 3.44e-04 36_[+2(8.69e-05)]_36 chrV:4871855-4871935 2.65e-02 80 chrX:7888756-7888836 4.76e-03 9_[+4(4.85e-05)]_63 chrIV:10206130-10206210 7.63e-03 80 chrIV:7296933-7297013 6.00e-03 24_[+1(4.88e-05)]_48 chrIV:4620708-4620788 4.86e-01 80 chrIV:7550602-7550682 7.18e-03 38_[+1(5.99e-05)]_34 chrII:14834755-14834835 1.92e-01 47_[+2(8.69e-05)]_25 chrV:17178666-17178746 2.60e-04 27_[+1(1.24e-05)]_45 chrX:12206710-12206790 2.26e-01 80 chrIV:7532535-7532615 8.76e-04 3_[+3(3.57e-05)]_69 chrI:3014661-3014741 5.24e-02 80 chrII:9146263-9146343 9.80e-05 48_[+4(2.21e-05)]_24 chrI:9443487-9443567 2.87e-05 39_[+5(7.18e-05)]_4_[+4(1.02e-05)]_\ 21 chrIII:6610833-6610913 6.59e-02 80 chrV:9897084-9897164 1.64e-05 9_[+4(1.02e-05)]_34_[+1(2.51e-05)]_\ 21 chrIV:2972135-2972215 5.68e-04 37_[+1(4.88e-05)]_35 chrII:12969636-12969716 1.55e-03 7_[+3(6.78e-06)]_8_[+3(6.78e-06)]_\ 49 chrII:8713421-8713501 2.53e-02 80 chrII:7924252-7924332 3.84e-04 58_[+1(9.14e-05)]_14 chrV:18473570-18473650 6.24e-03 80 chrX:12951350-12951430 9.18e-06 46_[+4(2.21e-05)]_26 chrV:8082343-8082423 5.10e-05 28_[+4(2.21e-05)]_44 chrIV:3493470-3493550 9.06e-05 38_[+1(4.88e-05)]_24_[+4(2.21e-05)]_\ 2 chrV:4062484-4062564 2.11e-01 80 chrII:12418166-12418246 1.00e-03 25_[+1(2.51e-05)]_47 chrV:17450679-17450759 2.37e-04 65_[+3(6.78e-06)]_7 chrIV:15906242-15906322 1.82e-01 80 chrII:12386898-12386978 1.09e-05 23_[+1(1.24e-05)]_32_[+2(5.01e-05)]_\ 9 chrI:11684427-11684507 1.87e-02 80 chrIV:10912456-10912536 7.89e-04 63_[+1(6.35e-06)]_9 chrII:9759224-9759304 1.02e-05 33_[+4(4.23e-05)]_19_[+3(1.88e-05)]_\ 12 chrX:7447490-7447570 1.52e-02 80 chrV:9051679-9051759 7.72e-06 9_[+4(1.02e-05)]_63 chrIV:15908412-15908492 7.88e-06 49_[+2(3.18e-05)]_2_[+4(2.21e-05)]_\ 13 chrV:14210994-14211074 1.01e-03 32_[+1(1.24e-05)]_40 chrV:17448218-17448298 2.92e-06 50_[+3(6.78e-06)]_14_[+2(3.18e-05)] chrI:12620665-12620745 1.60e-04 34_[+2(5.01e-05)]_9_[+1(4.88e-05)]_\ 21 chrX:4902542-4902622 1.33e-02 13_[+1(4.88e-05)]_59 chrII:12469870-12469950 5.51e-05 42_[+2(6.12e-05)]_15_[+4(2.21e-05)]_\ 7 chrX:15666619-15666699 3.61e-01 80 chrV:17188676-17188756 7.30e-04 80 chrV:16193198-16193278 3.39e-03 49_[+1(1.24e-05)]_23 chrIV:8685976-8686056 4.47e-03 80 chrIV:6511912-6511992 1.13e-02 26_[+2(6.12e-05)]_20_[+2(8.69e-05)]_\ 18 chrX:13347396-13347476 7.38e-06 4_[+1(1.24e-05)]_68 chrV:15847346-15847426 2.69e-03 21_[+4(1.02e-05)]_51 chrIV:8046608-8046688 2.05e-03 19_[+1(4.88e-05)]_53 chrI:7347581-7347661 7.78e-05 27_[+5(1.84e-05)]_7_[+2(3.18e-05)]_\ 30 chrIV:8179172-8179252 4.13e-05 33_[+1(2.51e-05)]_16_[+1(2.51e-05)]_\ 15 chrIV:7301652-7301732 3.09e-01 80 chrX:14930389-14930469 2.00e-03 55_[+4(4.23e-05)]_17 chrV:9358937-9359017 1.37e-05 36_[+1(9.14e-05)]_27_[+5(5.12e-05)]_\ 1 chrV:9901299-9901379 7.55e-02 80 chrX:8582933-8583013 9.31e-05 33_[+2(8.69e-05)]_[+4(1.62e-05)]_31 chrX:11375729-11375809 2.06e-03 25_[+4(5.84e-05)]_47 chrX:14794556-14794636 2.15e-01 80 chrII:2579634-2579714 8.24e-07 67_[+4(1.02e-05)]_5 chrI:4873037-4873117 9.31e-01 80 chrIV:15814720-15814800 5.06e-04 49_[+3(6.78e-06)]_23 chrIII:9739007-9739087 8.82e-03 80 chrX:11875434-11875514 7.25e-05 22_[+1(4.88e-05)]_50 chrII:13722618-13722698 1.59e-04 25_[+5(5.12e-05)]_47 chrV:2816020-2816100 5.95e-04 12_[+4(1.02e-05)]_60 chrIV:3917007-3917087 2.07e-04 8_[+4(2.21e-05)]_64 chrII:10132951-10133031 5.93e-06 3_[+5(7.18e-05)]_50_[+3(6.56e-05)]_\ 11 chrIV:6199144-6199224 5.55e-04 32_[+4(1.02e-05)]_40 chrX:980799-980879 4.82e-05 68_[+2(5.01e-05)]_4 chrV:6780825-6780905 4.69e-01 80 chrI:13006392-13006472 2.39e-02 80 chrII:6027993-6028073 4.80e-03 80 chrII:9952000-9952080 8.64e-03 16_[+5(5.12e-05)]_56 chrIV:10890239-10890319 5.22e-03 46_[+4(1.02e-05)]_26 chrV:17192424-17192504 3.51e-03 80 chrIV:3259093-3259173 1.89e-01 80 chrV:10873791-10873871 7.01e-03 44_[+1(9.14e-05)]_28 chrIII:2061955-2062035 3.59e-03 51_[+5(1.84e-05)]_21 chrIV:11892714-11892794 1.66e-04 13_[+2(8.69e-05)]_51_[+1(7.45e-05)] chrV:5708313-5708393 4.86e-05 20_[+5(5.12e-05)]_52 chrV:618073-618153 1.05e-03 45_[+4(2.21e-05)]_27 chrV:18709025-18709105 9.53e-01 80 chrIV:1977885-1977965 5.65e-02 10_[+2(6.12e-05)]_62 chrV:7386295-7386375 7.67e-04 24_[+4(2.21e-05)]_48 chrI:7406091-7406171 3.61e-05 55_[+4(3.28e-05)]_17 chrV:11022282-11022362 4.98e-05 37_[+4(2.21e-05)]_35 chrV:10465669-10465749 4.65e-01 80 chrX:2252573-2252653 7.13e-02 80 chrI:13008294-13008374 1.62e-05 5_[+4(2.21e-05)]_40_[+5(5.12e-05)]_\ 19 chrV:17016901-17016981 1.95e-01 80 chrV:14380311-14380391 1.11e-02 32_[+1(1.24e-05)]_40 chrIII:180206-180286 4.57e-05 40_[+4(1.02e-05)]_32 chrIV:9053531-9053611 1.63e-03 37_[+2(8.69e-05)]_35 chrX:10568053-10568133 3.72e-03 24_[+4(3.28e-05)]_37_[+4(4.85e-05)]_\ 3 chrX:10685617-10685697 3.20e-02 80 chrII:8191454-8191534 8.56e-04 67_[+4(1.62e-05)]_5 chrIV:10893988-10894068 3.03e-02 30_[+5(1.84e-05)]_42 chrII:10852800-10852880 4.08e-02 35_[+2(8.69e-05)]_37 chrV:4794446-4794526 8.21e-03 2_[+5(1.84e-05)]_70 chrX:5387851-5387931 9.13e-04 16_[+4(2.21e-05)]_56 chrI:4200366-4200446 9.70e-04 68_[+4(1.62e-05)]_4 chrV:2813262-2813342 6.60e-03 27_[+1(9.14e-05)]_45 chrIV:5102092-5102172 8.94e-05 2_[+1(4.88e-05)]_32_[+4(3.28e-05)]_\ 30 chrII:8058042-8058122 2.77e-01 80 chrX:15350410-15350490 2.01e-04 26_[+5(7.18e-05)]_46 chrIV:5580747-5580827 1.54e-02 80 chrI:10756798-10756878 1.18e-03 80 chrIV:3772014-3772094 4.49e-03 41_[+1(4.88e-05)]_31 chrIV:6284866-6284946 4.28e-04 80 chrX:8440520-8440600 1.70e-03 80 chrX:5927207-5927287 1.58e-03 [+4(2.21e-05)]_72 chrV:15858442-15858522 1.35e-06 3_[+4(1.02e-05)]_26_[+3(2.25e-05)]_\ 35 chrV:8170456-8170536 1.00e-01 80 chrV:13366604-13366684 1.18e-03 36_[+1(4.88e-05)]_36 chrI:13034453-13034533 3.34e-03 53_[+4(2.21e-05)]_19 chrII:10730843-10730923 5.03e-05 23_[+3(6.56e-05)]_10_[+2(8.69e-05)]_\ 31 chrV:4283843-4283923 2.61e-02 80 chrX:1830178-1830258 1.01e-03 1_[+4(4.23e-05)]_71 chrV:6857209-6857289 5.09e-04 80 chrV:13338826-13338906 8.89e-02 11_[+2(6.12e-05)]_12_[+2(8.69e-05)]_\ 41 chrI:40195-40275 2.63e-04 37_[+1(4.88e-05)]_35 chrIV:6403558-6403638 6.61e-02 80 chrX:4563286-4563366 6.33e-01 80 chrI:14973378-14973458 9.53e-04 30_[+4(3.28e-05)]_42 chrIV:3361733-3361813 4.92e-02 80 chrII:6313574-6313654 7.08e-01 80 chrV:4870781-4870861 3.36e-04 23_[+3(6.56e-05)]_49 chrIV:4036787-4036867 2.49e-01 80 chrV:13094545-13094625 3.60e-04 37_[+4(2.21e-05)]_35 chrII:10154439-10154519 7.13e-04 80 chrI:12613508-12613588 2.58e-04 4_[+1(1.24e-05)]_68 chrI:7285222-7285302 4.17e-02 80 chrIV:14622204-14622284 1.61e-02 36_[+1(9.14e-05)]_36 chrV:4867725-4867805 3.33e-01 80 chrIII:9365864-9365944 1.26e-02 67_[+1(4.88e-05)]_5 chrI:2273951-2274031 2.15e-04 80 chrV:666661-666741 3.32e-02 80 chrI:469889-469969 2.00e-01 80 chrIV:16415751-16415831 6.79e-01 80 chrII:4885045-4885125 1.98e-01 80 chrII:12387845-12387925 2.96e-03 43_[+4(2.21e-05)]_29 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n10.farnam.hpc.yale.internal ********************************************************************************