******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/hlh-1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:6388798-6388878 1.0000 80 chrII:4293282-4293362 1.0000 80 chrIII:2976335-2976415 1.0000 80 chrII:8498332-8498412 1.0000 80 chrIII:4049293-4049373 1.0000 80 chrI:8927409-8927489 1.0000 80 chrIII:6822949-6823029 1.0000 80 chrX:6962506-6962586 1.0000 80 chrX:12416008-12416088 1.0000 80 chrIV:11922170-11922250 1.0000 80 chrX:1984990-1985070 1.0000 80 chrI:14632632-14632712 1.0000 80 chrI:9019105-9019185 1.0000 80 chrIII:9346890-9346970 1.0000 80 chrIII:3643761-3643841 1.0000 80 chrV:14101142-14101222 1.0000 80 chrIII:4360036-4360116 1.0000 80 chrX:15143949-15144029 1.0000 80 chrII:907365-907445 1.0000 80 chrIII:2683302-2683382 1.0000 80 chrII:2769232-2769312 1.0000 80 chrX:5038934-5039014 1.0000 80 chrV:11919765-11919845 1.0000 80 chrV:18713773-18713853 1.0000 80 chrI:7507097-7507177 1.0000 80 chrI:74715-74795 1.0000 80 chrX:5586876-5586956 1.0000 80 chrIII:2440822-2440902 1.0000 80 chrX:13773206-13773286 1.0000 80 chrIII:8480477-8480557 1.0000 80 chrIV:12621067-12621147 1.0000 80 chrX:3680708-3680788 1.0000 80 chrX:6733323-6733403 1.0000 80 chrX:5944942-5945022 1.0000 80 chrIV:12614102-12614182 1.0000 80 chrIV:9977750-9977830 1.0000 80 chrIV:1106137-1106217 1.0000 80 chrIII:9448625-9448705 1.0000 80 chrV:18598233-18598313 1.0000 80 chrX:6801713-6801793 1.0000 80 chrI:14167953-14168033 1.0000 80 chrI:13502588-13502668 1.0000 80 chrX:7222014-7222094 1.0000 80 chrX:5191667-5191747 1.0000 80 chrIII:12820073-12820153 1.0000 80 chrX:4435378-4435458 1.0000 80 chrX:7162913-7162993 1.0000 80 chrX:3976874-3976954 1.0000 80 chrI:9947883-9947963 1.0000 80 chrIII:4359369-4359449 1.0000 80 chrII:11234925-11235005 1.0000 80 chrV:11958539-11958619 1.0000 80 chrI:3837775-3837855 1.0000 80 chrII:6936665-6936745 1.0000 80 chrII:4906663-4906743 1.0000 80 chrIII:8867164-8867244 1.0000 80 chrV:7821555-7821635 1.0000 80 chrII:7935781-7935861 1.0000 80 chrV:4485388-4485468 1.0000 80 chrIII:10666815-10666895 1.0000 80 chrI:14526960-14527040 1.0000 80 chrIII:2700753-2700833 1.0000 80 chrX:300441-300521 1.0000 80 chrI:5536053-5536133 1.0000 80 chrX:3861457-3861537 1.0000 80 chrX:6915459-6915539 1.0000 80 chrV:11429928-11430008 1.0000 80 chrIII:5486486-5486566 1.0000 80 chrIII:2618886-2618966 1.0000 80 chrII:4517413-4517493 1.0000 80 chrIV:16375330-16375410 1.0000 80 chrX:5806262-5806342 1.0000 80 chrI:271012-271092 1.0000 80 chrX:14009660-14009740 1.0000 80 chrV:20409160-20409240 1.0000 80 chrI:8044310-8044390 1.0000 80 chrV:16234428-16234508 1.0000 80 chrV:8195061-8195141 1.0000 80 chrIII:6639202-6639282 1.0000 80 chrII:4519099-4519179 1.0000 80 chrIII:1381158-1381238 1.0000 80 chrII:4572738-4572818 1.0000 80 chrV:20920569-20920649 1.0000 80 chrIII:8286983-8287063 1.0000 80 chrX:7217323-7217403 1.0000 80 chrIII:7397361-7397441 1.0000 80 chrIV:7849394-7849474 1.0000 80 chrX:16388519-16388599 1.0000 80 chrIII:9701016-9701096 1.0000 80 chrV:15658825-15658905 1.0000 80 chrII:13008221-13008301 1.0000 80 chrX:12248314-12248394 1.0000 80 chrX:1708910-1708990 1.0000 80 chrX:4784964-4785044 1.0000 80 chrX:9638595-9638675 1.0000 80 chrX:11193876-11193956 1.0000 80 chrII:11766195-11766275 1.0000 80 chrII:1784486-1784566 1.0000 80 chrIV:8121139-8121219 1.0000 80 chrII:9142523-9142603 1.0000 80 chrV:13154293-13154373 1.0000 80 chrI:14837262-14837342 1.0000 80 chrIV:7942316-7942396 1.0000 80 chrX:14659620-14659700 1.0000 80 chrI:11755460-11755540 1.0000 80 chrII:2459881-2459961 1.0000 80 chrX:16044467-16044547 1.0000 80 chrX:4279316-4279396 1.0000 80 chrI:955543-955623 1.0000 80 chrX:7522712-7522792 1.0000 80 chrV:753253-753333 1.0000 80 chrIV:10665810-10665890 1.0000 80 chrX:6144653-6144733 1.0000 80 chrI:3899429-3899509 1.0000 80 chrIV:12216056-12216136 1.0000 80 chrI:6000359-6000439 1.0000 80 chrII:7357314-7357394 1.0000 80 chrIV:1790396-1790476 1.0000 80 chrV:9239383-9239463 1.0000 80 chrIII:7530336-7530416 1.0000 80 chrIII:5975490-5975570 1.0000 80 chrX:5591527-5591607 1.0000 80 chrII:10039962-10040042 1.0000 80 chrX:9301976-9302056 1.0000 80 chrII:7962350-7962430 1.0000 80 chrIII:9346300-9346380 1.0000 80 chrIV:9645349-9645429 1.0000 80 chrI:6893279-6893359 1.0000 80 chrX:16391311-16391391 1.0000 80 chrX:12910083-12910163 1.0000 80 chrIII:7215742-7215822 1.0000 80 chrV:13395522-13395602 1.0000 80 chrX:2452474-2452554 1.0000 80 chrV:5667118-5667198 1.0000 80 chrX:16321475-16321555 1.0000 80 chrV:1152018-1152098 1.0000 80 chrX:7225167-7225247 1.0000 80 chrV:11917802-11917882 1.0000 80 chrI:11559388-11559468 1.0000 80 chrII:11575093-11575173 1.0000 80 chrII:11188214-11188294 1.0000 80 chrII:909671-909751 1.0000 80 chrIII:11410564-11410644 1.0000 80 chrI:2861183-2861263 1.0000 80 chrIV:606266-606346 1.0000 80 chrIII:7531532-7531612 1.0000 80 chrV:13473610-13473690 1.0000 80 chrX:46390-46470 1.0000 80 chrX:7945597-7945677 1.0000 80 chrX:14039448-14039528 1.0000 80 chrIV:6135742-6135822 1.0000 80 chrIII:8299244-8299324 1.0000 80 chrX:2614325-2614405 1.0000 80 chrX:16088038-16088118 1.0000 80 chrIII:7907526-7907606 1.0000 80 chrI:9298595-9298675 1.0000 80 chrII:7415691-7415771 1.0000 80 chrII:11283146-11283226 1.0000 80 chrII:11555824-11555904 1.0000 80 chrII:606283-606363 1.0000 80 chrV:9550038-9550118 1.0000 80 chrII:12952329-12952409 1.0000 80 chrII:6788834-6788914 1.0000 80 chrIV:10957756-10957836 1.0000 80 chrV:12896991-12897071 1.0000 80 chrI:14963627-14963707 1.0000 80 chrV:6457048-6457128 1.0000 80 chrX:6823468-6823548 1.0000 80 chrIV:10958347-10958427 1.0000 80 chrIII:1372735-1372815 1.0000 80 chrIII:5307861-5307941 1.0000 80 chrIII:930498-930578 1.0000 80 chrII:526540-526620 1.0000 80 chrI:6925643-6925723 1.0000 80 chrIV:379001-379081 1.0000 80 chrII:11275659-11275739 1.0000 80 chrII:8894791-8894871 1.0000 80 chrIII:8501502-8501582 1.0000 80 chrIII:981350-981430 1.0000 80 chrX:9669910-9669990 1.0000 80 chrIII:5418104-5418184 1.0000 80 chrX:5259563-5259643 1.0000 80 chrX:812428-812508 1.0000 80 chrIV:314624-314704 1.0000 80 chrI:13038208-13038288 1.0000 80 chrV:10342607-10342687 1.0000 80 chrX:2050420-2050500 1.0000 80 chrII:2488573-2488653 1.0000 80 chrX:1115382-1115462 1.0000 80 chrX:3267620-3267700 1.0000 80 chrIV:11779201-11779281 1.0000 80 chrX:8786826-8786906 1.0000 80 chrX:3440009-3440089 1.0000 80 chrIV:6947000-6947080 1.0000 80 chrI:14384985-14385065 1.0000 80 chrII:683654-683734 1.0000 80 chrIV:5820254-5820334 1.0000 80 chrIV:9079466-9079546 1.0000 80 chrII:13394420-13394500 1.0000 80 chrX:9933622-9933702 1.0000 80 chrII:11275046-11275126 1.0000 80 chrII:6545170-6545250 1.0000 80 chrIII:8302257-8302337 1.0000 80 chrI:11807896-11807976 1.0000 80 chrX:4429537-4429617 1.0000 80 chrIV:6140835-6140915 1.0000 80 chrIV:6603095-6603175 1.0000 80 chrIII:6820513-6820593 1.0000 80 chrI:6155754-6155834 1.0000 80 chrIV:9976764-9976844 1.0000 80 chrII:8126789-8126869 1.0000 80 chrI:12094733-12094813 1.0000 80 chrV:20850754-20850834 1.0000 80 chrIV:2136766-2136846 1.0000 80 chrV:8667421-8667501 1.0000 80 chrX:4895418-4895498 1.0000 80 chrI:5189236-5189316 1.0000 80 chrX:9735608-9735688 1.0000 80 chrI:9550880-9550960 1.0000 80 chrV:16836494-16836574 1.0000 80 chrII:14178735-14178815 1.0000 80 chrX:6509918-6509998 1.0000 80 chrX:1191677-1191757 1.0000 80 chrIV:89872-89952 1.0000 80 chrI:8902598-8902678 1.0000 80 chrII:1816233-1816313 1.0000 80 chrX:6597265-6597345 1.0000 80 chrX:3738782-3738862 1.0000 80 chrX:3316606-3316686 1.0000 80 chrI:640146-640226 1.0000 80 chrV:8659495-8659575 1.0000 80 chrX:3959387-3959467 1.0000 80 chrIII:3991533-3991613 1.0000 80 chrIV:8068431-8068511 1.0000 80 chrII:4676385-4676465 1.0000 80 chrX:2520620-2520700 1.0000 80 chrIV:13021912-13021992 1.0000 80 chrII:13472219-13472299 1.0000 80 chrIII:9118573-9118653 1.0000 80 chrI:11993792-11993872 1.0000 80 chrV:3187954-3188034 1.0000 80 chrIV:3654987-3655067 1.0000 80 chrX:6957167-6957247 1.0000 80 chrX:4076113-4076193 1.0000 80 chrII:3596122-3596202 1.0000 80 chrIII:13063144-13063224 1.0000 80 chrX:15565489-15565569 1.0000 80 chrI:6250091-6250171 1.0000 80 chrIV:12192270-12192350 1.0000 80 chrX:13174622-13174702 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_hlh-1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/hlh-1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.272 C 0.23 G 0.241 T 0.258 Background letter frequencies (from file dataset with add-one prior applied): A 0.271 C 0.23 G 0.241 T 0.258 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CAGCTGTY MEME-1 width = 8 sites = 231 llr = 1591 E-value = 3.3e-206 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 Description -------------------------------------------------------------------------------- Simplified A :a2:::2: pos.-specific C a:17::24 probability G ::71:a11 matrix T :::2a:55 bits 2.1 * * 1.9 * * 1.7 * ** 1.5 ** ** Relative 1.3 ** ** Entropy 1.1 ** ** (9.9 bits) 0.8 ** *** 0.6 ****** * 0.4 ****** * 0.2 ******** 0.0 -------- Multilevel CAGCTGTT consensus AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:12192270-12192350 32 1.43e-05 GATGCAAGTG CAGCTGTT TGGTGTCAAT chrI:6250091-6250171 44 1.43e-05 CGATCAGGAA CAGCTGTT TGTCAGCAGT chrII:3596122-3596202 22 1.43e-05 GTGAGCTCGC CAGCTGTT CCTATCAGTT chrIV:8068431-8068511 26 1.43e-05 AATGAAGAAA CAGCTGTT GCATTCGCTG chrX:3959387-3959467 58 1.43e-05 CTCTATAGTG CAGCTGTT TGATTGTCAC chrI:640146-640226 27 1.43e-05 TGCCTGACAA CAGCTGTT CACCGACAAA chrII:1816233-1816313 54 1.43e-05 GGCAGCTGGG CAGCTGTT GACCTAAACT chrII:2488573-2488653 55 1.43e-05 CAAAATGTAG CAGCTGTT GTGCAGATTG chrIII:981350-981430 27 1.43e-05 ctaagGCACG CAGCTGTT CAACAGGGAA chrIII:5307861-5307941 49 1.43e-05 TGGAAAAGGT CAGCTGTT ATATATAACG chrII:12952329-12952409 38 1.43e-05 CACAGAATGT CAGCTGTT TCGAGAGATA chrII:909671-909751 52 1.43e-05 TGACCCTGCA CAGCTGTT GCGCACACCT chrV:11917802-11917882 8 1.43e-05 TGTGAGA CAGCTGTT GTTAACAATT chrIV:9645349-9645429 37 1.43e-05 TGCTCGGCAG CAGCTGTT TGTTGAGCGT chrII:7962350-7962430 26 1.43e-05 AGTTTGTTGT CAGCTGTT CTGTTGACCT chrX:5591527-5591607 56 1.43e-05 ACACTGCGCA CAGCTGTT TGGCAGGTGG chrV:9239383-9239463 51 1.43e-05 CGGTCGAACA CAGCTGTT TCTAGAGAGG chrV:753253-753333 34 1.43e-05 TGTAACATAC CAGCTGTT CACTTTACCT chrI:14837262-14837342 8 1.43e-05 AAAGTGT CAGCTGTT TTGCATAAAT chrII:1784486-1784566 35 1.43e-05 GAGGGGAGAG CAGCTGTT GACCTTTAAA chrX:1708910-1708990 68 1.43e-05 TGCGGAGCAA CAGCTGTT GTGCA chrX:12248314-12248394 67 1.43e-05 CTGTCTTTGT CAGCTGTT GTTTTA chrV:15658825-15658905 59 1.43e-05 GATAAGAAAA CAGCTGTT GTGAGCTATC chrIII:2618886-2618966 28 1.43e-05 AAAAGTTAGT CAGCTGTT CCATCGGAAG chrX:6915459-6915539 48 1.43e-05 TCACGGAGTA CAGCTGTT AGAAGCTACC chrX:3861457-3861537 64 1.43e-05 ATGTTGATGA CAGCTGTT GGAAAATAC chrI:3837775-3837855 52 1.43e-05 GGAAGAGTGT CAGCTGTT ATAAGAGATG chrIII:4359369-4359449 29 1.43e-05 CGTAGAAGCG CAGCTGTT CTTATTCTCC chrIII:3643761-3643841 70 1.43e-05 AAAATTCAGA CAGCTGTT GAG chrIII:6822949-6823029 29 1.43e-05 CAAACGCAAA CAGCTGTT CCTGTGCTCA chrI:8927409-8927489 24 1.43e-05 ATCTATCTGT CAGCTGTT CTTGCCCGCG chrI:8902598-8902678 36 2.70e-05 CGGGAACTAA CAGCTGTC TTCAGGAGCC chrIV:6947000-6947080 15 2.70e-05 AGAGAAAGGT CAGCTGTC AATGCTTTTG chrIV:11779201-11779281 33 2.70e-05 TGTCACCGGT CAGCTGTC AATCGATCCG chrI:6000359-6000439 7 2.70e-05 AGGGGT CAGCTGTC CGGAGCACAC chrX:4784964-4785044 31 2.70e-05 GTTTCAACAA CAGCTGTC GTTGTGTTGT chrIV:7849394-7849474 42 2.70e-05 AGCTGCCTAC CAGCTGTC GCGGTCTCCA chrIII:8480477-8480557 27 2.70e-05 CACTGCACGT CAGCTGTC GTACTCGTTG chrX:13773206-13773286 26 2.70e-05 GTGGGAGGAT CAGCTGTC GACTGGAGAA chrIII:2440822-2440902 34 2.70e-05 GTCCTATGGG CAGCTGTC GGGGTGGCCG chrI:9019105-9019185 31 2.70e-05 AAATCAGCAT CAGCTGTC GTATCTCCTC chrII:8498332-8498412 41 2.70e-05 CATTAGTGCG CAGCTGTC ACAGAGTTGC chrX:16321475-16321555 4 4.21e-05 TCC CAGCTGAT CACAAGACAT chrI:11755460-11755540 31 4.21e-05 CTCTACCGAA CAGCTGAT TGTAATTGTT chrIV:16375330-16375410 59 4.21e-05 TCCAAAAGAG CAGCTGAT GAGCCGCCTT chrIV:12614102-12614182 33 4.21e-05 TGGCTCTTGA CAGCTGAT GTGGGTGAAT chrX:15143949-15144029 50 4.21e-05 AGTAAATGAA CAGCTGAT GTGATGGCAT chrX:15565489-15565569 20 6.82e-05 TGCCACAGGA CAGCTGCT TCCAAATGTC chrIII:13063144-13063224 3 6.82e-05 GT CAGCTGAC AAGCGGCGCG chrII:4676385-4676465 37 6.82e-05 AGTGCACAAG CAGCTGAC TACCAATCAC chrX:6597265-6597345 57 6.82e-05 ATCCCGAGGA CAGCTGCT CGTCACATTA chrII:14178735-14178815 41 6.82e-05 GCCTGAAGAG CAGCTGAC ATGATGGTCC chrV:20850754-20850834 56 6.82e-05 AGGCGAGGAG CAGCTGAC CTATTTTATG chrI:6155754-6155834 73 6.82e-05 GCTAATTGAG CAGCTGCT chrI:11807896-11807976 38 6.82e-05 AGTGCATGAA CAGCTGCT GCCAGAAGAG chrX:812428-812508 68 6.82e-05 TCCACGGTGG CAGCTGCT GCCGC chrIII:1372735-1372815 28 6.82e-05 ATATGCTCGC CAGCTGCT CTCTTTTACG chrV:12896991-12897071 30 6.82e-05 CGTCCAGGAA CAGCTGAC ATTTATTCTC chrV:9550038-9550118 46 6.82e-05 CGGGCGCTGG CAGCTGAC TGATACATAA chrII:7415691-7415771 45 6.82e-05 CTTCTTCCGC CAGCTGAC TTGGTTGACA chrI:9298595-9298675 70 6.82e-05 CAGAAATACG CAGCTGAC ACT chrV:13473610-13473690 29 6.82e-05 AATTGTTGAG CAGCTGAC ACATGTCGTC chrIV:606266-606346 36 6.82e-05 CACGCAGAGA CAGCTGCT TCTGCTGCTC chrIII:7530336-7530416 69 6.82e-05 TCTTGCCAAA CAGCTGAC TGTT chrIV:8121139-8121219 41 6.82e-05 CCCAACGTAG CAGCTGAC GAAATCACTC chrII:11766195-11766275 38 6.82e-05 GTCTGTTGGC CAGCTGAC ATTGGTCTTT chrV:20409160-20409240 33 6.82e-05 GAAAAGAGCA CAGCTGCT GCTCGGGGCT chrI:271012-271092 55 6.82e-05 ACACATAAAA CAGCTGAC ATCTTCTCTT chrIII:5486486-5486566 67 6.82e-05 TCTTATCCGT CAGCTGAC ATCTTA chrII:7935781-7935861 47 6.82e-05 AGAACAGAGA CAGCTGAC AGAACGCAAA chrII:6936665-6936745 29 6.82e-05 TCACACACAA CAGCTGAC AACGGCCTCC chrX:5586876-5586956 30 6.82e-05 AGCAAATCAA CAGCTGAC ACAGGAGAGA chrI:74715-74795 40 6.82e-05 GTCCGGCGGA CAGCTGAC CTGTGACAAG chrIII:2683302-2683382 26 6.82e-05 GAGGGGATGA CAGCTGCT GCTCGCCGAG chrII:907365-907445 53 6.82e-05 CCCTCACCCG CAGCTGCT GGAGCAAAGT chrII:4293282-4293362 5 6.82e-05 TCAA CAGCTGCT CAACGGAAAG chrX:1115382-1115462 32 7.96e-05 GCGACAACGA CAGCTGCC CGTTGGCGGT chrI:11559388-11559468 30 7.96e-05 CTCAATCCGT CAGCTGCC GTCGTCAGTC chrV:1152018-1152098 67 7.96e-05 CAAGAGCCGT CAGCTGCC TGTTTC chrI:3899429-3899509 67 7.96e-05 AACAACCAAA CAGCTGCC ACGTCA chrX:9638595-9638675 22 7.96e-05 ACAAATTGAA CAGCTGCC AGTCAAAATG chrIII:9701016-9701096 59 7.96e-05 TTCCGGATAG CAGCTGCC CCGTACACCT chrIV:3654987-3655067 22 9.56e-05 ATGTGGGGGA CAACTGTT CACGAATGGA chrI:11993792-11993872 38 9.56e-05 GATCAATCGC CAACTGTT CATGTCTGTT chrX:3316606-3316686 16 9.56e-05 CGGAGATGCG CAACTGTT GCAATGCACA chrIV:89872-89952 31 9.56e-05 TCCCGATTAC CAACTGTT CCTTTTCTTC chrIV:9079466-9079546 18 9.56e-05 TCTGAGCCGC CAACTGTT TTCTATTGGA chrIII:930498-930578 29 9.56e-05 GCAGTGCCGC CAACTGTT TTATGGAACC chrX:7945597-7945677 11 9.56e-05 AAGCTCACAC CAACTGTT CGGTCCCAAG chrX:46390-46470 60 9.56e-05 CCTCGGCTGC CAACTGTT CTTCTTCTGT chrII:4572738-4572818 5 9.56e-05 TGAA CAACTGTT TCTCACACGG chrI:14167953-14168033 37 9.56e-05 ATCACATCAA CAACTGTT CGAATGGGCT chrX:5944942-5945022 47 9.56e-05 GCCCGCAGAG CAACTGTT CCTTGGCTGT chrV:11919765-11919845 57 9.56e-05 TTGCGGATAC CAACTGTT GTTGCGGGGA chrV:14101142-14101222 66 9.56e-05 ATGTGTTGAG CAACTGTT CCCCAAA chrIII:2976335-2976415 14 9.56e-05 CAAACACGAA CAACTGTT TTCGGGTCCC chrX:6509918-6509998 37 1.23e-04 GTCTTCGGAC CAACTGTC GTCTTGTTTT chrIV:6603095-6603175 54 1.23e-04 AGCGTCGTAG CAGCTGGT ATATCTTTTC chrIII:7531532-7531612 68 1.23e-04 ACACCCAAAT CAACTGTC AATAA chrIV:1790396-1790476 63 1.23e-04 GATAATATAC CAACTGTC ACATGATGAT chrII:4906663-4906743 37 1.23e-04 CGAATGTTGC CAACTGTC CCTCTCTCCG chrII:11234925-11235005 47 1.23e-04 TGGAACCTGA CAACTGTC TGTTGTTGTG chrIII:4049293-4049373 17 1.23e-04 TTCTGCGCGG CAGCTGGT CGCGCGGTGT chrX:1191677-1191757 17 1.65e-04 TGTGTCGCGG CAGCTGGC CTTGCGGGTA chrV:16836494-16836574 58 1.65e-04 GATATCAGAA CAGTTGTT GCCACCACAT chrII:8126789-8126869 71 1.65e-04 AAAAAGAGGT CAGCTGTG GT chrX:8786826-8786906 50 1.65e-04 CTGATCACGT CAGTTGTT GTTTGTCATG chrII:11275659-11275739 30 1.65e-04 ACGGTGTGAC CAGTTGTT GCACACCTAC chrII:11283146-11283226 44 1.65e-04 AGGGAAAAGA CAGTTGTT TCGATAATTT chrIII:8299244-8299324 36 1.65e-04 TCTCATCGGT CAGCTGTG CACCTGTCTA chrX:2452474-2452554 72 1.65e-04 CAAAAGTGAA CAGTTGTT G chrV:13395522-13395602 41 1.65e-04 TCGTAAAAGC CAGCTGTG CGCATGCGAG chrX:16391311-16391391 46 1.65e-04 GCAGTTCAAG CAGTTGTT CGTCACCGAG chrV:16234428-16234508 44 1.65e-04 AAGCTCACCG CAGCTGGC GGCCAAATTG chrIII:10666815-10666895 63 1.65e-04 GTGGAGTCGT CAGCTGTG ACAGTGTGTC chrX:4435378-4435458 30 1.65e-04 GAGCCCTGAA CAGCTGTG TGCGCTGTCT chrX:3680708-3680788 19 1.65e-04 GTTGAATGGT CAGCTGTG ATTTCAATTT chrIV:13021912-13021992 36 1.93e-04 TCAGGCAGGT CACCTGTT GGTCAGCCGG chrV:10342607-10342687 44 1.93e-04 ATTTGCATAC CACCTGTT CAATTTCTTT chrIV:314624-314704 46 1.93e-04 CCCATTATCA CACCTGTT GGTTTGATTT chrX:5259563-5259643 34 1.93e-04 CTTTTAGCTG CAGTTGTC GCTATCAGTT chrII:8894791-8894871 25 1.93e-04 GTTGGCTAGA CACCTGTT GAAGCGCAAA chrX:16088038-16088118 49 1.93e-04 TGCGACCCGA CAGTTGTC AAGAACCCTC chrII:2459881-2459961 20 1.93e-04 CCACTGGGAA CACCTGTT GTTTCGGAAA chrIII:6639202-6639282 28 1.93e-04 AAGAATCAAA CAGTTGTC AGGAGCAGAT chrV:11429928-11430008 45 1.93e-04 TGCTTCACGT CAGTTGTC ATTTCTCCTG chrV:11958539-11958619 16 1.93e-04 TGGGAGATGC CACCTGTT AAGAAGAAAA chrX:12416008-12416088 39 1.93e-04 ACACGATGAA CACCTGTT TCTATGATGC chrIII:1381158-1381238 4 2.05e-04 GAC CACCTGTC GTCTCCTTTC chrIII:9448625-9448705 51 2.05e-04 ACACTTCGCG CACCTGTC ATTTGGTAGA chrV:3187954-3188034 31 2.20e-04 ATCGAAACAA CAGGTGTT CGCCCGTTGA chrX:7522712-7522792 72 2.20e-04 CAGTACCCGA CAGGTGTT C chrI:13038208-13038288 25 2.33e-04 TTAGACATGT CAGGTGTC TAGTTTAAAC chrI:12094733-12094813 31 2.50e-04 CTCTCCACAC CAACTGAT GTCGGCAGAT chrII:11575093-11575173 20 2.50e-04 TGGCTTCGAA CAACTGAT TAACGTTCGG chrX:4895418-4895498 37 2.79e-04 TCCCGCAAGA CAACTGAC ATCACTTAAA chrX:3267620-3267700 49 2.79e-04 CAGATCGCAG CAACTGCT CCACTTTTTT chrIII:11410564-11410644 41 2.79e-04 CTTCAGGGAA CAACTGAC ATTTGCGCGA chrIV:12216056-12216136 8 2.79e-04 CAGTGCA CAACTGAC ATGTTCGAGG chrII:9142523-9142603 59 2.79e-04 GCACTCTGAA CAACTGAC ACTTTGTCTA chrI:8044310-8044390 31 2.79e-04 AAGACGAGTG CAACTGAC AAGTAATCGG chrX:300441-300521 63 2.79e-04 CATCATCAGA CAACTGAC TTCAATTCGA chrIII:12820073-12820153 58 2.79e-04 GTCTCCCGAA CAACTGCT TCAGTACCTG chrX:5191667-5191747 64 2.79e-04 CACGAAAGAA CAACTGAC GACCGTCCG chrII:683654-683734 54 3.23e-04 AAATTCCCGA CAACTGCC GAAATTCCAA chrX:7225167-7225247 52 3.23e-04 ATGGGCGCGA CAGTTGAT ATCTGTCCAA chrX:7222014-7222094 4 3.23e-04 CAG CAACTGCC ATGTGGCGTT chrIV:9976764-9976844 66 3.79e-04 ATCACTTCAA CAGTTGCT CTTCATT chrIV:10958347-10958427 39 3.79e-04 AGCACAACAA CAGTTGAC CGCCCCCATC chrIII:7907526-7907606 22 3.79e-04 GATAAAGTGA CAGTTGCT CGATGACCCT chrX:16388519-16388599 48 3.79e-04 AGGATAGTGA CAGCTGCG GAGCGCGTCT chrIII:7397361-7397441 48 3.79e-04 GCAGATATGA CAGTTGCT GGTTTCACAT chrV:18713773-18713853 20 3.79e-04 TCTGCCATGA CAGCTGCG CAGGTCTGGT chrII:13472219-13472299 47 4.16e-04 TGGTGCAAAA CACCTGCT GCTCACAAAG chrX:3738782-3738862 48 4.16e-04 CAGAACAGAG CACCTGCT GTCGTCATCA chrIV:379001-379081 13 4.16e-04 TCCAATGAAG CACCTGAC ATTTGTGTCT chrII:526540-526620 56 4.16e-04 GGCACCACAC CACCTGAC GCAAGAAAAG chrI:9947883-9947963 29 4.16e-04 TATATGTCGC CACCTGCT CATCTTCTCA chrIV:9977750-9977830 61 4.59e-04 TATGAAAAGA CAACTGGT GTTGATGCAT chrIII:9346300-9346380 22 5.36e-04 CAATATCTGC CAACTGTG CGAGGTCATT chrII:10039962-10040042 41 5.36e-04 GGCTGTCCAA CAGATGTC GACCAGGCTC chrX:7217323-7217403 41 5.36e-04 CGGCGCACGG CAACTGTG TACAATTTAC chrV:20920569-20920649 72 5.36e-04 CACACAACAC CAACTGTG C chrX:7162913-7162993 51 5.36e-04 CCTACAGCAA CAGATGTC GTTCAGTCCT chrX:4076113-4076193 46 6.22e-04 GACAAGGCAG CAGTTGGT CGTGTCGGAC chrX:9933622-9933702 42 6.22e-04 GGGGACTGAA CAGTTGGT TCACGAGAAG chrII:13394420-13394500 18 6.22e-04 GGTGGTCTGT CAGGTGAC ATGTCACGGA chrIII:5418104-5418184 26 6.22e-04 TTTTCAAGAG CAGGTGCT TGTCGGATTG chrI:2861183-2861263 70 6.22e-04 AGTGAAGCGC CAGGTGCT GTC chrV:5667118-5667198 51 6.22e-04 GTTGTAAAAA CAGCTGGG CTTTTTTCGA chrI:6893279-6893359 57 6.22e-04 GTAACGATGC CAGGTGAC CTCTTATTCT chrX:11193876-11193956 32 6.22e-04 TCCAGGGCAA CAGTTGGT TGTCTCGGGG chrII:13008221-13008301 34 6.22e-04 CCGTCAGTAA CAGGTGAC GGAAGCTGAG chrIII:8286983-8287063 69 6.22e-04 TGTGATCCAC CAGTTGGT TCAT chrI:5536053-5536133 47 6.22e-04 TACATCCAAG CAGGTGAC GTCTCTAAGG chrI:13502588-13502668 61 6.22e-04 ACTGAGCCAA CAGGTGAC TAAGTGAAAG chrX:1984990-1985070 41 6.22e-04 GGAATAACAA CAGGTGCT CTCCAGTGTT chrIV:11922170-11922250 19 6.22e-04 TGTAATTGAG CAGTTGGT TGATAGAGGG chrX:6962506-6962586 29 6.22e-04 ATACTAGAAA CAGTTGGT CGTGAGGGAA chrX:13174622-13174702 55 6.89e-04 AATGGAGCAA CAGTTGGC AAGGTCAGAA chrII:6545170-6545250 32 6.89e-04 ATGGAGGGAA CAGTTGTG ACATTAGGAT chrX:9669910-9669990 53 6.89e-04 CAAATATCAA CATCTGTC CACAAGCAAG chrX:14039448-14039528 37 6.89e-04 TTTTATGCAA CAGTTGGC CTGTCGTCGG chrIV:12621067-12621147 72 6.89e-04 AATGTCCGCA CAGTTGTG T chrX:5038934-5039014 39 6.89e-04 AGCCTGGAGT CAGTTGGC CTGAATGCGC chrI:14632632-14632712 48 6.89e-04 ACATTCGAAA CAGTTGGC GTTCGAGAGT chrI:7507097-7507177 57 7.29e-04 TGAGATGTGT CACCTGTG TCAGATCAAA chrI:6925643-6925723 51 7.88e-04 AGTCTATCAC CAGGTGGT GGCATTTGAA chrX:6957167-6957247 57 8.41e-04 TTTAATTCGA CAGGTGGC TTGAAAAATT chrV:8667421-8667501 28 8.41e-04 TACGACCACG CGGCTGTT CGGACATTTC chrII:11275046-11275126 7 8.41e-04 GATAGG CGGCTGTT GAGACCAATT chrX:5806262-5806342 55 8.41e-04 TGTAAGACAA CAGGTGGC GAGATTGAGG chrIII:2700753-2700833 66 8.41e-04 TCTGTGTCGC CTGCTGTT GGTCACT chrX:6801713-6801793 34 8.41e-04 GATGGCGCGT CAGGTGGC TTTCACCCTA chrII:2769232-2769312 11 8.41e-04 AAATTGACGA CAGGTGGC GCATCCTCCG chrIII:6820513-6820593 54 8.96e-04 TGAAGACACA CGGCTGTC GAGGAATTGT chrV:8195061-8195141 32 8.96e-04 TTGCAAGAAA CAGATGAT ACGTTCAATT chrX:3440009-3440089 12 9.87e-04 TGCTGTTTCG CAATTGAT ATCATCTTTG chrV:6457048-6457128 6 9.87e-04 GGTGA CAGCCGTT CCCTCTCTGG chrX:12910083-12910163 38 9.87e-04 GCCTGAAGAA CAGATGAC GCCGCTCGTA chrII:4519099-4519179 43 9.87e-04 AACTCGAGTC CACGTGTC ACCGCAAATG chrII:6788834-6788914 3 1.07e-03 GA CAATTGAC ATAGAACAGA chrV:7821555-7821635 46 1.07e-03 GGCAAAGTGC CAGCCGTC TCCGATCGCC chrX:16044467-16044547 46 1.30e-03 GTGAGCCCAC CACTTGCT CAACAGACCC chrV:18598233-18598313 22 1.30e-03 GGACTGGGAA CACCTGCG TTTTCCTTCT chrII:11555824-11555904 57 1.40e-03 ATTTGTTCAA CAGATGGC TGCTCGGTGT chrX:14009660-14009740 30 1.40e-03 CCAACCTCAG CAACTGGG CAAACGTGAG chrV:8659495-8659575 58 1.52e-03 CTCCTGAAGA CAGGTGAG TTCAATGCAC chrIV:2136766-2136846 6 1.52e-03 TAGAG CACATGTT GTGATATTGC chrX:4429537-4429617 37 1.52e-03 GGTCAGTCGA CACATGTT CCGTGCACCT chrIV:6140835-6140915 23 1.67e-03 CCATAGTTTT CTGCTGCT GCGCGGGATG chrIV:5820254-5820334 69 1.67e-03 GTGACAAGAA CACATGTC AATA chrII:11188214-11188294 45 1.67e-03 CAATGGACAC CACATGTC GCTGCCTGTT chrX:3976874-3976954 46 1.67e-03 GTAGTTCTAG CTGCTGAC AGCCGCATTT chrX:9301976-9302056 9 1.78e-03 AGAAGAAG CATTTGTC GGGGAAGAGG chrIV:1106137-1106217 13 1.78e-03 TACACTTTGT CGGCTGCC ACGATCTGTA chrI:9550880-9550960 58 1.87e-03 GGATGAGGCA CACTTGGC CTGATTGATC chrX:2050420-2050500 69 1.87e-03 TACTGGTGAA CAGCAGTC AGGC chrX:2614325-2614405 9 2.04e-03 TGTCACAA CATGTGTT GTACATTGCA chrV:13154293-13154373 63 2.04e-03 CTCTTAATAT CTGCTGGT CATTTCTCGA chrI:14526960-14527040 40 2.04e-03 GGGGGGATGA CATGTGTT TGGCAGAGTG chrX:9735608-9735688 8 2.20e-03 CAAGCGT CATGTGTC ACCAATCTTA chrIV:6135742-6135822 61 2.20e-03 GCTCGCGGAG CATGTGTC ACTCTGAAGG chrX:6733323-6733403 7 2.33e-03 AGAGGT CTGTTGTC CACAGAGCTG chrX:14659620-14659700 26 2.44e-03 ATCAAGATCA CGCCTGTC CATTACTCTC chrII:4517413-4517493 71 2.54e-03 GAACGGATGC CAATTGCG CA chrIII:9346890-9346970 36 2.90e-03 ACGACAGCAG CAGCAGCC GGAGAGAGAG chrII:7357314-7357394 15 3.04e-03 GGAAATCAAC CATATGTC ACTCATCAAC chrIII:8867164-8867244 23 3.24e-03 CTCTGTGCTC CACATGTG TGTGCTCCTA chrX:4279316-4279396 42 3.64e-03 TTGGGATGAG CAGCCGAG ACGATGAGTG chrV:4485388-4485468 63 4.71e-03 CTTCTCGAGC CAATCGTC AAACAACTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:12192270-12192350 1.4e-05 31_[+1]_41 chrI:6250091-6250171 1.4e-05 43_[+1]_29 chrII:3596122-3596202 1.4e-05 21_[+1]_51 chrIV:8068431-8068511 1.4e-05 25_[+1]_47 chrX:3959387-3959467 1.4e-05 57_[+1]_15 chrI:640146-640226 1.4e-05 26_[+1]_46 chrII:1816233-1816313 1.4e-05 53_[+1]_19 chrII:2488573-2488653 1.4e-05 54_[+1]_18 chrIII:981350-981430 1.4e-05 26_[+1]_46 chrIII:5307861-5307941 1.4e-05 48_[+1]_24 chrII:12952329-12952409 1.4e-05 37_[+1]_35 chrII:909671-909751 1.4e-05 51_[+1]_21 chrV:11917802-11917882 1.4e-05 7_[+1]_65 chrIV:9645349-9645429 1.4e-05 36_[+1]_36 chrII:7962350-7962430 1.4e-05 25_[+1]_47 chrX:5591527-5591607 1.4e-05 55_[+1]_17 chrV:9239383-9239463 1.4e-05 50_[+1]_22 chrV:753253-753333 1.4e-05 33_[+1]_39 chrI:14837262-14837342 1.4e-05 7_[+1]_65 chrII:1784486-1784566 1.4e-05 34_[+1]_38 chrX:1708910-1708990 1.4e-05 67_[+1]_5 chrX:12248314-12248394 1.4e-05 66_[+1]_6 chrV:15658825-15658905 1.4e-05 58_[+1]_14 chrIII:2618886-2618966 1.4e-05 27_[+1]_45 chrX:6915459-6915539 1.4e-05 47_[+1]_25 chrX:3861457-3861537 1.4e-05 63_[+1]_9 chrI:3837775-3837855 1.4e-05 51_[+1]_21 chrIII:4359369-4359449 1.4e-05 28_[+1]_44 chrIII:3643761-3643841 1.4e-05 69_[+1]_3 chrIII:6822949-6823029 1.4e-05 28_[+1]_44 chrI:8927409-8927489 1.4e-05 23_[+1]_49 chrI:8902598-8902678 2.7e-05 35_[+1]_37 chrIV:6947000-6947080 2.7e-05 14_[+1]_58 chrIV:11779201-11779281 2.7e-05 32_[+1]_40 chrI:6000359-6000439 2.7e-05 6_[+1]_66 chrX:4784964-4785044 2.7e-05 30_[+1]_42 chrIV:7849394-7849474 2.7e-05 41_[+1]_31 chrIII:8480477-8480557 2.7e-05 26_[+1]_46 chrX:13773206-13773286 2.7e-05 25_[+1]_47 chrIII:2440822-2440902 2.7e-05 33_[+1]_39 chrI:9019105-9019185 2.7e-05 30_[+1]_42 chrII:8498332-8498412 2.7e-05 40_[+1]_32 chrX:16321475-16321555 4.2e-05 3_[+1]_69 chrI:11755460-11755540 4.2e-05 30_[+1]_42 chrIV:16375330-16375410 4.2e-05 58_[+1]_14 chrIV:12614102-12614182 4.2e-05 32_[+1]_40 chrX:15143949-15144029 4.2e-05 49_[+1]_23 chrX:15565489-15565569 6.8e-05 19_[+1]_53 chrIII:13063144-13063224 6.8e-05 2_[+1]_70 chrII:4676385-4676465 6.8e-05 36_[+1]_36 chrX:6597265-6597345 6.8e-05 56_[+1]_16 chrII:14178735-14178815 6.8e-05 40_[+1]_32 chrV:20850754-20850834 6.8e-05 55_[+1]_17 chrI:6155754-6155834 6.8e-05 72_[+1] chrI:11807896-11807976 6.8e-05 37_[+1]_35 chrX:812428-812508 6.8e-05 67_[+1]_5 chrIII:1372735-1372815 6.8e-05 27_[+1]_45 chrV:12896991-12897071 6.8e-05 29_[+1]_43 chrV:9550038-9550118 6.8e-05 45_[+1]_27 chrII:7415691-7415771 6.8e-05 44_[+1]_28 chrI:9298595-9298675 6.8e-05 69_[+1]_3 chrV:13473610-13473690 6.8e-05 28_[+1]_44 chrIV:606266-606346 6.8e-05 35_[+1]_37 chrIII:7530336-7530416 6.8e-05 68_[+1]_4 chrIV:8121139-8121219 6.8e-05 40_[+1]_32 chrII:11766195-11766275 6.8e-05 37_[+1]_35 chrV:20409160-20409240 6.8e-05 32_[+1]_40 chrI:271012-271092 6.8e-05 54_[+1]_18 chrIII:5486486-5486566 6.8e-05 66_[+1]_6 chrII:7935781-7935861 6.8e-05 46_[+1]_26 chrII:6936665-6936745 6.8e-05 28_[+1]_44 chrX:5586876-5586956 6.8e-05 29_[+1]_43 chrI:74715-74795 6.8e-05 39_[+1]_33 chrIII:2683302-2683382 6.8e-05 25_[+1]_47 chrII:907365-907445 6.8e-05 52_[+1]_20 chrII:4293282-4293362 6.8e-05 4_[+1]_68 chrX:1115382-1115462 8e-05 31_[+1]_41 chrI:11559388-11559468 8e-05 29_[+1]_43 chrV:1152018-1152098 8e-05 66_[+1]_6 chrI:3899429-3899509 8e-05 66_[+1]_6 chrX:9638595-9638675 8e-05 21_[+1]_51 chrIII:9701016-9701096 8e-05 58_[+1]_14 chrIV:3654987-3655067 9.6e-05 21_[+1]_51 chrI:11993792-11993872 9.6e-05 37_[+1]_35 chrX:3316606-3316686 9.6e-05 15_[+1]_57 chrIV:89872-89952 9.6e-05 30_[+1]_42 chrIV:9079466-9079546 9.6e-05 17_[+1]_55 chrIII:930498-930578 9.6e-05 28_[+1]_44 chrX:7945597-7945677 9.6e-05 10_[+1]_62 chrX:46390-46470 9.6e-05 59_[+1]_13 chrII:4572738-4572818 9.6e-05 4_[+1]_68 chrI:14167953-14168033 9.6e-05 36_[+1]_36 chrX:5944942-5945022 9.6e-05 46_[+1]_26 chrV:11919765-11919845 9.6e-05 56_[+1]_16 chrV:14101142-14101222 9.6e-05 65_[+1]_7 chrIII:2976335-2976415 9.6e-05 13_[+1]_59 chrX:6509918-6509998 0.00012 36_[+1]_36 chrIV:6603095-6603175 0.00012 53_[+1]_19 chrIII:7531532-7531612 0.00012 67_[+1]_5 chrIV:1790396-1790476 0.00012 62_[+1]_10 chrII:4906663-4906743 0.00012 36_[+1]_36 chrII:11234925-11235005 0.00012 46_[+1]_26 chrIII:4049293-4049373 0.00012 16_[+1]_56 chrX:1191677-1191757 0.00016 16_[+1]_56 chrV:16836494-16836574 0.00016 57_[+1]_15 chrII:8126789-8126869 0.00016 70_[+1]_2 chrX:8786826-8786906 0.00016 49_[+1]_23 chrII:11275659-11275739 0.00016 29_[+1]_43 chrII:11283146-11283226 0.00016 43_[+1]_29 chrIII:8299244-8299324 0.00016 35_[+1]_37 chrX:2452474-2452554 0.00016 71_[+1]_1 chrV:13395522-13395602 0.00016 40_[+1]_32 chrX:16391311-16391391 0.00016 45_[+1]_27 chrV:16234428-16234508 0.00016 43_[+1]_29 chrIII:10666815-10666895 0.00016 62_[+1]_10 chrX:4435378-4435458 0.00016 29_[+1]_43 chrX:3680708-3680788 0.00016 18_[+1]_54 chrIV:13021912-13021992 0.00019 35_[+1]_37 chrV:10342607-10342687 0.00019 43_[+1]_29 chrIV:314624-314704 0.00019 45_[+1]_27 chrX:5259563-5259643 0.00019 33_[+1]_39 chrII:8894791-8894871 0.00019 24_[+1]_48 chrX:16088038-16088118 0.00019 48_[+1]_24 chrII:2459881-2459961 0.00019 19_[+1]_53 chrIII:6639202-6639282 0.00019 27_[+1]_45 chrV:11429928-11430008 0.00019 44_[+1]_28 chrV:11958539-11958619 0.00019 15_[+1]_57 chrX:12416008-12416088 0.00019 38_[+1]_34 chrIII:1381158-1381238 0.0002 3_[+1]_69 chrIII:9448625-9448705 0.0002 50_[+1]_22 chrV:3187954-3188034 0.00022 30_[+1]_42 chrX:7522712-7522792 0.00022 71_[+1]_1 chrI:13038208-13038288 0.00023 24_[+1]_48 chrI:12094733-12094813 0.00025 30_[+1]_42 chrII:11575093-11575173 0.00025 19_[+1]_53 chrX:4895418-4895498 0.00028 36_[+1]_36 chrX:3267620-3267700 0.00028 48_[+1]_24 chrIII:11410564-11410644 0.00028 40_[+1]_32 chrIV:12216056-12216136 0.00028 7_[+1]_65 chrII:9142523-9142603 0.00028 58_[+1]_14 chrI:8044310-8044390 0.00028 30_[+1]_42 chrX:300441-300521 0.00028 62_[+1]_10 chrIII:12820073-12820153 0.00028 57_[+1]_15 chrX:5191667-5191747 0.00028 63_[+1]_9 chrII:683654-683734 0.00032 53_[+1]_19 chrX:7225167-7225247 0.00032 51_[+1]_21 chrX:7222014-7222094 0.00032 3_[+1]_69 chrIV:9976764-9976844 0.00038 65_[+1]_7 chrIV:10958347-10958427 0.00038 38_[+1]_34 chrIII:7907526-7907606 0.00038 21_[+1]_51 chrX:16388519-16388599 0.00038 47_[+1]_25 chrIII:7397361-7397441 0.00038 47_[+1]_25 chrV:18713773-18713853 0.00038 19_[+1]_53 chrII:13472219-13472299 0.00042 46_[+1]_26 chrX:3738782-3738862 0.00042 47_[+1]_25 chrIV:379001-379081 0.00042 12_[+1]_60 chrII:526540-526620 0.00042 55_[+1]_17 chrI:9947883-9947963 0.00042 28_[+1]_44 chrIV:9977750-9977830 0.00046 60_[+1]_12 chrIII:9346300-9346380 0.00054 21_[+1]_51 chrII:10039962-10040042 0.00054 40_[+1]_32 chrX:7217323-7217403 0.00054 40_[+1]_32 chrV:20920569-20920649 0.00054 71_[+1]_1 chrX:7162913-7162993 0.00054 50_[+1]_22 chrX:4076113-4076193 0.00062 45_[+1]_27 chrX:9933622-9933702 0.00062 41_[+1]_31 chrII:13394420-13394500 0.00062 17_[+1]_55 chrIII:5418104-5418184 0.00062 25_[+1]_47 chrI:2861183-2861263 0.00062 69_[+1]_3 chrV:5667118-5667198 0.00062 50_[+1]_22 chrI:6893279-6893359 0.00062 56_[+1]_16 chrX:11193876-11193956 0.00062 31_[+1]_41 chrII:13008221-13008301 0.00062 33_[+1]_39 chrIII:8286983-8287063 0.00062 68_[+1]_4 chrI:5536053-5536133 0.00062 46_[+1]_26 chrI:13502588-13502668 0.00062 60_[+1]_12 chrX:1984990-1985070 0.00062 40_[+1]_32 chrIV:11922170-11922250 0.00062 18_[+1]_54 chrX:6962506-6962586 0.00062 28_[+1]_44 chrX:13174622-13174702 0.00069 54_[+1]_18 chrII:6545170-6545250 0.00069 31_[+1]_41 chrX:9669910-9669990 0.00069 52_[+1]_20 chrX:14039448-14039528 0.00069 36_[+1]_36 chrIV:12621067-12621147 0.00069 71_[+1]_1 chrX:5038934-5039014 0.00069 38_[+1]_34 chrI:14632632-14632712 0.00069 47_[+1]_25 chrI:7507097-7507177 0.00073 56_[+1]_16 chrI:6925643-6925723 0.00079 50_[+1]_22 chrX:6957167-6957247 0.00084 56_[+1]_16 chrV:8667421-8667501 0.00084 27_[+1]_45 chrII:11275046-11275126 0.00084 6_[+1]_66 chrX:5806262-5806342 0.00084 54_[+1]_18 chrIII:2700753-2700833 0.00084 65_[+1]_7 chrX:6801713-6801793 0.00084 33_[+1]_39 chrII:2769232-2769312 0.00084 10_[+1]_62 chrIII:6820513-6820593 0.0009 53_[+1]_19 chrV:8195061-8195141 0.0009 31_[+1]_41 chrX:3440009-3440089 0.00099 11_[+1]_61 chrV:6457048-6457128 0.00099 5_[+1]_67 chrX:12910083-12910163 0.00099 37_[+1]_35 chrII:4519099-4519179 0.00099 42_[+1]_30 chrII:6788834-6788914 0.0011 2_[+1]_70 chrV:7821555-7821635 0.0011 45_[+1]_27 chrX:16044467-16044547 0.0013 45_[+1]_27 chrV:18598233-18598313 0.0013 21_[+1]_51 chrII:11555824-11555904 0.0014 56_[+1]_16 chrX:14009660-14009740 0.0014 29_[+1]_43 chrV:8659495-8659575 0.0015 57_[+1]_15 chrIV:2136766-2136846 0.0015 5_[+1]_67 chrX:4429537-4429617 0.0015 36_[+1]_36 chrIV:6140835-6140915 0.0017 22_[+1]_50 chrIV:5820254-5820334 0.0017 68_[+1]_4 chrII:11188214-11188294 0.0017 44_[+1]_28 chrX:3976874-3976954 0.0017 45_[+1]_27 chrX:9301976-9302056 0.0018 8_[+1]_64 chrIV:1106137-1106217 0.0018 12_[+1]_60 chrI:9550880-9550960 0.0019 57_[+1]_15 chrX:2050420-2050500 0.0019 68_[+1]_4 chrX:2614325-2614405 0.002 8_[+1]_64 chrV:13154293-13154373 0.002 62_[+1]_10 chrI:14526960-14527040 0.002 39_[+1]_33 chrX:9735608-9735688 0.0022 7_[+1]_65 chrIV:6135742-6135822 0.0022 60_[+1]_12 chrX:6733323-6733403 0.0023 6_[+1]_66 chrX:14659620-14659700 0.0024 25_[+1]_47 chrII:4517413-4517493 0.0025 70_[+1]_2 chrIII:9346890-9346970 0.0029 35_[+1]_37 chrII:7357314-7357394 0.003 14_[+1]_58 chrIII:8867164-8867244 0.0032 22_[+1]_50 chrX:4279316-4279396 0.0036 41_[+1]_31 chrV:4485388-4485468 0.0047 62_[+1]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGTY width=8 seqs=231 chrIV:12192270-12192350 ( 32) CAGCTGTT 1 chrI:6250091-6250171 ( 44) CAGCTGTT 1 chrII:3596122-3596202 ( 22) CAGCTGTT 1 chrIV:8068431-8068511 ( 26) CAGCTGTT 1 chrX:3959387-3959467 ( 58) CAGCTGTT 1 chrI:640146-640226 ( 27) CAGCTGTT 1 chrII:1816233-1816313 ( 54) CAGCTGTT 1 chrII:2488573-2488653 ( 55) CAGCTGTT 1 chrIII:981350-981430 ( 27) CAGCTGTT 1 chrIII:5307861-5307941 ( 49) CAGCTGTT 1 chrII:12952329-12952409 ( 38) CAGCTGTT 1 chrII:909671-909751 ( 52) CAGCTGTT 1 chrV:11917802-11917882 ( 8) CAGCTGTT 1 chrIV:9645349-9645429 ( 37) CAGCTGTT 1 chrII:7962350-7962430 ( 26) CAGCTGTT 1 chrX:5591527-5591607 ( 56) CAGCTGTT 1 chrV:9239383-9239463 ( 51) CAGCTGTT 1 chrV:753253-753333 ( 34) CAGCTGTT 1 chrI:14837262-14837342 ( 8) CAGCTGTT 1 chrII:1784486-1784566 ( 35) CAGCTGTT 1 chrX:1708910-1708990 ( 68) CAGCTGTT 1 chrX:12248314-12248394 ( 67) CAGCTGTT 1 chrV:15658825-15658905 ( 59) CAGCTGTT 1 chrIII:2618886-2618966 ( 28) CAGCTGTT 1 chrX:6915459-6915539 ( 48) CAGCTGTT 1 chrX:3861457-3861537 ( 64) CAGCTGTT 1 chrI:3837775-3837855 ( 52) CAGCTGTT 1 chrIII:4359369-4359449 ( 29) CAGCTGTT 1 chrIII:3643761-3643841 ( 70) CAGCTGTT 1 chrIII:6822949-6823029 ( 29) CAGCTGTT 1 chrI:8927409-8927489 ( 24) CAGCTGTT 1 chrI:8902598-8902678 ( 36) CAGCTGTC 1 chrIV:6947000-6947080 ( 15) CAGCTGTC 1 chrIV:11779201-11779281 ( 33) CAGCTGTC 1 chrI:6000359-6000439 ( 7) CAGCTGTC 1 chrX:4784964-4785044 ( 31) CAGCTGTC 1 chrIV:7849394-7849474 ( 42) CAGCTGTC 1 chrIII:8480477-8480557 ( 27) CAGCTGTC 1 chrX:13773206-13773286 ( 26) CAGCTGTC 1 chrIII:2440822-2440902 ( 34) CAGCTGTC 1 chrI:9019105-9019185 ( 31) CAGCTGTC 1 chrII:8498332-8498412 ( 41) CAGCTGTC 1 chrX:16321475-16321555 ( 4) CAGCTGAT 1 chrI:11755460-11755540 ( 31) CAGCTGAT 1 chrIV:16375330-16375410 ( 59) CAGCTGAT 1 chrIV:12614102-12614182 ( 33) CAGCTGAT 1 chrX:15143949-15144029 ( 50) CAGCTGAT 1 chrX:15565489-15565569 ( 20) CAGCTGCT 1 chrIII:13063144-13063224 ( 3) CAGCTGAC 1 chrII:4676385-4676465 ( 37) CAGCTGAC 1 chrX:6597265-6597345 ( 57) CAGCTGCT 1 chrII:14178735-14178815 ( 41) CAGCTGAC 1 chrV:20850754-20850834 ( 56) CAGCTGAC 1 chrI:6155754-6155834 ( 73) CAGCTGCT 1 chrI:11807896-11807976 ( 38) CAGCTGCT 1 chrX:812428-812508 ( 68) CAGCTGCT 1 chrIII:1372735-1372815 ( 28) CAGCTGCT 1 chrV:12896991-12897071 ( 30) CAGCTGAC 1 chrV:9550038-9550118 ( 46) CAGCTGAC 1 chrII:7415691-7415771 ( 45) CAGCTGAC 1 chrI:9298595-9298675 ( 70) CAGCTGAC 1 chrV:13473610-13473690 ( 29) CAGCTGAC 1 chrIV:606266-606346 ( 36) CAGCTGCT 1 chrIII:7530336-7530416 ( 69) CAGCTGAC 1 chrIV:8121139-8121219 ( 41) CAGCTGAC 1 chrII:11766195-11766275 ( 38) CAGCTGAC 1 chrV:20409160-20409240 ( 33) CAGCTGCT 1 chrI:271012-271092 ( 55) CAGCTGAC 1 chrIII:5486486-5486566 ( 67) CAGCTGAC 1 chrII:7935781-7935861 ( 47) CAGCTGAC 1 chrII:6936665-6936745 ( 29) CAGCTGAC 1 chrX:5586876-5586956 ( 30) CAGCTGAC 1 chrI:74715-74795 ( 40) CAGCTGAC 1 chrIII:2683302-2683382 ( 26) CAGCTGCT 1 chrII:907365-907445 ( 53) CAGCTGCT 1 chrII:4293282-4293362 ( 5) CAGCTGCT 1 chrX:1115382-1115462 ( 32) CAGCTGCC 1 chrI:11559388-11559468 ( 30) CAGCTGCC 1 chrV:1152018-1152098 ( 67) CAGCTGCC 1 chrI:3899429-3899509 ( 67) CAGCTGCC 1 chrX:9638595-9638675 ( 22) CAGCTGCC 1 chrIII:9701016-9701096 ( 59) CAGCTGCC 1 chrIV:3654987-3655067 ( 22) CAACTGTT 1 chrI:11993792-11993872 ( 38) CAACTGTT 1 chrX:3316606-3316686 ( 16) CAACTGTT 1 chrIV:89872-89952 ( 31) CAACTGTT 1 chrIV:9079466-9079546 ( 18) CAACTGTT 1 chrIII:930498-930578 ( 29) CAACTGTT 1 chrX:7945597-7945677 ( 11) CAACTGTT 1 chrX:46390-46470 ( 60) CAACTGTT 1 chrII:4572738-4572818 ( 5) CAACTGTT 1 chrI:14167953-14168033 ( 37) CAACTGTT 1 chrX:5944942-5945022 ( 47) CAACTGTT 1 chrV:11919765-11919845 ( 57) CAACTGTT 1 chrV:14101142-14101222 ( 66) CAACTGTT 1 chrIII:2976335-2976415 ( 14) CAACTGTT 1 chrX:6509918-6509998 ( 37) CAACTGTC 1 chrIV:6603095-6603175 ( 54) CAGCTGGT 1 chrIII:7531532-7531612 ( 68) CAACTGTC 1 chrIV:1790396-1790476 ( 63) CAACTGTC 1 chrII:4906663-4906743 ( 37) CAACTGTC 1 chrII:11234925-11235005 ( 47) CAACTGTC 1 chrIII:4049293-4049373 ( 17) CAGCTGGT 1 chrX:1191677-1191757 ( 17) CAGCTGGC 1 chrV:16836494-16836574 ( 58) CAGTTGTT 1 chrII:8126789-8126869 ( 71) CAGCTGTG 1 chrX:8786826-8786906 ( 50) CAGTTGTT 1 chrII:11275659-11275739 ( 30) CAGTTGTT 1 chrII:11283146-11283226 ( 44) CAGTTGTT 1 chrIII:8299244-8299324 ( 36) CAGCTGTG 1 chrX:2452474-2452554 ( 72) CAGTTGTT 1 chrV:13395522-13395602 ( 41) CAGCTGTG 1 chrX:16391311-16391391 ( 46) CAGTTGTT 1 chrV:16234428-16234508 ( 44) CAGCTGGC 1 chrIII:10666815-10666895 ( 63) CAGCTGTG 1 chrX:4435378-4435458 ( 30) CAGCTGTG 1 chrX:3680708-3680788 ( 19) CAGCTGTG 1 chrIV:13021912-13021992 ( 36) CACCTGTT 1 chrV:10342607-10342687 ( 44) CACCTGTT 1 chrIV:314624-314704 ( 46) CACCTGTT 1 chrX:5259563-5259643 ( 34) CAGTTGTC 1 chrII:8894791-8894871 ( 25) CACCTGTT 1 chrX:16088038-16088118 ( 49) CAGTTGTC 1 chrII:2459881-2459961 ( 20) CACCTGTT 1 chrIII:6639202-6639282 ( 28) CAGTTGTC 1 chrV:11429928-11430008 ( 45) CAGTTGTC 1 chrV:11958539-11958619 ( 16) CACCTGTT 1 chrX:12416008-12416088 ( 39) CACCTGTT 1 chrIII:1381158-1381238 ( 4) CACCTGTC 1 chrIII:9448625-9448705 ( 51) CACCTGTC 1 chrV:3187954-3188034 ( 31) CAGGTGTT 1 chrX:7522712-7522792 ( 72) CAGGTGTT 1 chrI:13038208-13038288 ( 25) CAGGTGTC 1 chrI:12094733-12094813 ( 31) CAACTGAT 1 chrII:11575093-11575173 ( 20) CAACTGAT 1 chrX:4895418-4895498 ( 37) CAACTGAC 1 chrX:3267620-3267700 ( 49) CAACTGCT 1 chrIII:11410564-11410644 ( 41) CAACTGAC 1 chrIV:12216056-12216136 ( 8) CAACTGAC 1 chrII:9142523-9142603 ( 59) CAACTGAC 1 chrI:8044310-8044390 ( 31) CAACTGAC 1 chrX:300441-300521 ( 63) CAACTGAC 1 chrIII:12820073-12820153 ( 58) CAACTGCT 1 chrX:5191667-5191747 ( 64) CAACTGAC 1 chrII:683654-683734 ( 54) CAACTGCC 1 chrX:7225167-7225247 ( 52) CAGTTGAT 1 chrX:7222014-7222094 ( 4) CAACTGCC 1 chrIV:9976764-9976844 ( 66) CAGTTGCT 1 chrIV:10958347-10958427 ( 39) CAGTTGAC 1 chrIII:7907526-7907606 ( 22) CAGTTGCT 1 chrX:16388519-16388599 ( 48) CAGCTGCG 1 chrIII:7397361-7397441 ( 48) CAGTTGCT 1 chrV:18713773-18713853 ( 20) CAGCTGCG 1 chrII:13472219-13472299 ( 47) CACCTGCT 1 chrX:3738782-3738862 ( 48) CACCTGCT 1 chrIV:379001-379081 ( 13) CACCTGAC 1 chrII:526540-526620 ( 56) CACCTGAC 1 chrI:9947883-9947963 ( 29) CACCTGCT 1 chrIV:9977750-9977830 ( 61) CAACTGGT 1 chrIII:9346300-9346380 ( 22) CAACTGTG 1 chrII:10039962-10040042 ( 41) CAGATGTC 1 chrX:7217323-7217403 ( 41) CAACTGTG 1 chrV:20920569-20920649 ( 72) CAACTGTG 1 chrX:7162913-7162993 ( 51) CAGATGTC 1 chrX:4076113-4076193 ( 46) CAGTTGGT 1 chrX:9933622-9933702 ( 42) CAGTTGGT 1 chrII:13394420-13394500 ( 18) CAGGTGAC 1 chrIII:5418104-5418184 ( 26) CAGGTGCT 1 chrI:2861183-2861263 ( 70) CAGGTGCT 1 chrV:5667118-5667198 ( 51) CAGCTGGG 1 chrI:6893279-6893359 ( 57) CAGGTGAC 1 chrX:11193876-11193956 ( 32) CAGTTGGT 1 chrII:13008221-13008301 ( 34) CAGGTGAC 1 chrIII:8286983-8287063 ( 69) CAGTTGGT 1 chrI:5536053-5536133 ( 47) CAGGTGAC 1 chrI:13502588-13502668 ( 61) CAGGTGAC 1 chrX:1984990-1985070 ( 41) CAGGTGCT 1 chrIV:11922170-11922250 ( 19) CAGTTGGT 1 chrX:6962506-6962586 ( 29) CAGTTGGT 1 chrX:13174622-13174702 ( 55) CAGTTGGC 1 chrII:6545170-6545250 ( 32) CAGTTGTG 1 chrX:9669910-9669990 ( 53) CATCTGTC 1 chrX:14039448-14039528 ( 37) CAGTTGGC 1 chrIV:12621067-12621147 ( 72) CAGTTGTG 1 chrX:5038934-5039014 ( 39) CAGTTGGC 1 chrI:14632632-14632712 ( 48) CAGTTGGC 1 chrI:7507097-7507177 ( 57) CACCTGTG 1 chrI:6925643-6925723 ( 51) CAGGTGGT 1 chrX:6957167-6957247 ( 57) CAGGTGGC 1 chrV:8667421-8667501 ( 28) CGGCTGTT 1 chrII:11275046-11275126 ( 7) CGGCTGTT 1 chrX:5806262-5806342 ( 55) CAGGTGGC 1 chrIII:2700753-2700833 ( 66) CTGCTGTT 1 chrX:6801713-6801793 ( 34) CAGGTGGC 1 chrII:2769232-2769312 ( 11) CAGGTGGC 1 chrIII:6820513-6820593 ( 54) CGGCTGTC 1 chrV:8195061-8195141 ( 32) CAGATGAT 1 chrX:3440009-3440089 ( 12) CAATTGAT 1 chrV:6457048-6457128 ( 6) CAGCCGTT 1 chrX:12910083-12910163 ( 38) CAGATGAC 1 chrII:4519099-4519179 ( 43) CACGTGTC 1 chrII:6788834-6788914 ( 3) CAATTGAC 1 chrV:7821555-7821635 ( 46) CAGCCGTC 1 chrX:16044467-16044547 ( 46) CACTTGCT 1 chrV:18598233-18598313 ( 22) CACCTGCG 1 chrII:11555824-11555904 ( 57) CAGATGGC 1 chrX:14009660-14009740 ( 30) CAACTGGG 1 chrV:8659495-8659575 ( 58) CAGGTGAG 1 chrIV:2136766-2136846 ( 6) CACATGTT 1 chrX:4429537-4429617 ( 37) CACATGTT 1 chrIV:6140835-6140915 ( 23) CTGCTGCT 1 chrIV:5820254-5820334 ( 69) CACATGTC 1 chrII:11188214-11188294 ( 45) CACATGTC 1 chrX:3976874-3976954 ( 46) CTGCTGAC 1 chrX:9301976-9302056 ( 9) CATTTGTC 1 chrIV:1106137-1106217 ( 13) CGGCTGCC 1 chrI:9550880-9550960 ( 58) CACTTGGC 1 chrX:2050420-2050500 ( 69) CAGCAGTC 1 chrX:2614325-2614405 ( 9) CATGTGTT 1 chrV:13154293-13154373 ( 63) CTGCTGGT 1 chrI:14526960-14527040 ( 40) CATGTGTT 1 chrX:9735608-9735688 ( 8) CATGTGTC 1 chrIV:6135742-6135822 ( 61) CATGTGTC 1 chrX:6733323-6733403 ( 7) CTGTTGTC 1 chrX:14659620-14659700 ( 26) CGCCTGTC 1 chrII:4517413-4517493 ( 71) CAATTGCG 1 chrIII:9346890-9346970 ( 36) CAGCAGCC 1 chrII:7357314-7357394 ( 15) CATATGTC 1 chrIII:8867164-8867244 ( 23) CACATGTG 1 chrX:4279316-4279396 ( 42) CAGCCGAG 1 chrV:4485388-4485468 ( 63) CAATCGTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.92852 E= 3.3e-206 -1450 212 -1450 -1450 182 -1450 -347 -357 -61 -109 151 -309 -251 162 -134 -77 -497 -373 -1450 192 -1450 -1450 205 -1450 -39 -48 -115 101 -1450 87 -140 92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 231 E= 3.3e-206 0.000000 1.000000 0.000000 0.000000 0.956710 0.000000 0.021645 0.021645 0.177489 0.108225 0.683983 0.030303 0.047619 0.705628 0.095238 0.151515 0.008658 0.017316 0.000000 0.974026 0.000000 0.000000 1.000000 0.000000 0.207792 0.164502 0.108225 0.519481 0.000000 0.419913 0.090909 0.489177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTY MEME-1 regular expression -------------------------------------------------------------------------------- CAGCTG[TA][TC] -------------------------------------------------------------------------------- Time 6.99 secs. ******************************************************************************** ******************************************************************************** MOTIF HWGTGTAA MEME-2 width = 8 sites = 21 llr = 186 E-value = 1.9e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 56::::aa pos.-specific C 2::::::: probability G :1a:a::: matrix T 33:a:a:: bits 2.1 * * 1.9 ****** 1.7 ****** 1.5 ****** Relative 1.3 ****** Entropy 1.1 ****** (12.8 bits) 0.8 ****** 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAGTGTAA consensus TT sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrI:6250091-6250171 73 2.09e-05 ATAAGAGGAA AAGTGTAA chrII:1816233-1816313 73 2.09e-05 ACCTAAACTA AAGTGTAA chrII:526540-526620 5 2.09e-05 CAAA AAGTGTAA TTTTTGTTGT chrI:3899429-3899509 51 2.09e-05 AGCCGGGGGC AAGTGTAA CAACCAAACA chrX:5806262-5806342 42 2.09e-05 GGTAAAGGAA AAGTGTAA GACAACAGGT chrX:7222014-7222094 71 2.09e-05 CAGTGTGGAG AAGTGTAA AG chrIII:2683302-2683382 3 2.09e-05 AA AAGTGTAA ATCTTGAGGG chrII:907365-907445 67 2.09e-05 TGCTGGAGCA AAGTGTAA CTTTGA chrIV:9976764-9976844 38 5.84e-05 CTGTCTTCTT CAGTGTAA ACCACGCGGT chrV:9550038-9550118 28 5.84e-05 TGAGCAGAGT TAGTGTAA CGGGCGCTGG chrII:2459881-2459961 42 5.84e-05 CGGAAATCAC TAGTGTAA TGGGTCCCCC chrII:9142523-9142603 23 5.84e-05 CTCCGATTTC TAGTGTAA GATATTGAGT chrI:3837775-3837855 67 7.83e-05 GTTATAAGAG ATGTGTAA TAGGAT chrIII:3643761-3643841 16 7.83e-05 CAAAAGAGCA ATGTGTAA CACTGGCGCT chrI:6925643-6925723 4 1.33e-04 TTT TTGTGTAA GGATGCGAAC chrV:753253-753333 21 1.33e-04 AACCAAACTC CTGTGTAA CATACCAGCT chrIII:2700753-2700833 14 1.33e-04 CTGGTGGCCG CTGTGTAA TATGTGGCTC chrV:11919765-11919845 19 1.33e-04 TTAGTGGACT TTGTGTAA ATTATAGTGG chrII:11555824-11555904 69 1.66e-04 GATGGCTGCT CGGTGTAA TATT chrX:14009660-14009740 54 1.66e-04 TGAGCGTTCG TGGTGTAA TGCACAGGTA chrIII:9448625-9448705 71 1.66e-04 TTGGTAGATG CGGTGTAA TA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:6250091-6250171 2.1e-05 72_[+2] chrII:1816233-1816313 2.1e-05 72_[+2] chrII:526540-526620 2.1e-05 4_[+2]_68 chrI:3899429-3899509 2.1e-05 50_[+2]_22 chrX:5806262-5806342 2.1e-05 41_[+2]_31 chrX:7222014-7222094 2.1e-05 70_[+2]_2 chrIII:2683302-2683382 2.1e-05 2_[+2]_70 chrII:907365-907445 2.1e-05 66_[+2]_6 chrIV:9976764-9976844 5.8e-05 37_[+2]_35 chrV:9550038-9550118 5.8e-05 27_[+2]_45 chrII:2459881-2459961 5.8e-05 41_[+2]_31 chrII:9142523-9142603 5.8e-05 22_[+2]_50 chrI:3837775-3837855 7.8e-05 66_[+2]_6 chrIII:3643761-3643841 7.8e-05 15_[+2]_57 chrI:6925643-6925723 0.00013 3_[+2]_69 chrV:753253-753333 0.00013 20_[+2]_52 chrIII:2700753-2700833 0.00013 13_[+2]_59 chrV:11919765-11919845 0.00013 18_[+2]_54 chrII:11555824-11555904 0.00017 68_[+2]_4 chrX:14009660-14009740 0.00017 53_[+2]_19 chrIII:9448625-9448705 0.00017 70_[+2]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HWGTGTAA width=8 seqs=21 chrI:6250091-6250171 ( 73) AAGTGTAA 1 chrII:1816233-1816313 ( 73) AAGTGTAA 1 chrII:526540-526620 ( 5) AAGTGTAA 1 chrI:3899429-3899509 ( 51) AAGTGTAA 1 chrX:5806262-5806342 ( 42) AAGTGTAA 1 chrX:7222014-7222094 ( 71) AAGTGTAA 1 chrIII:2683302-2683382 ( 3) AAGTGTAA 1 chrII:907365-907445 ( 67) AAGTGTAA 1 chrIV:9976764-9976844 ( 38) CAGTGTAA 1 chrV:9550038-9550118 ( 28) TAGTGTAA 1 chrII:2459881-2459961 ( 42) TAGTGTAA 1 chrII:9142523-9142603 ( 23) TAGTGTAA 1 chrI:3837775-3837855 ( 67) ATGTGTAA 1 chrIII:3643761-3643841 ( 16) ATGTGTAA 1 chrI:6925643-6925723 ( 4) TTGTGTAA 1 chrV:753253-753333 ( 21) CTGTGTAA 1 chrIII:2700753-2700833 ( 14) CTGTGTAA 1 chrV:11919765-11919845 ( 19) TTGTGTAA 1 chrII:11555824-11555904 ( 69) CGGTGTAA 1 chrX:14009660-14009740 ( 54) TGGTGTAA 1 chrIII:9448625-9448705 ( 71) CGGTGTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.7488 E= 1.9e+003 81 5 -1104 15 107 -1104 -75 15 -1104 -1104 205 -1104 -1104 -1104 -1104 196 -1104 -1104 205 -1104 -1104 -1104 -1104 196 188 -1104 -1104 -1104 188 -1104 -1104 -1104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 1.9e+003 0.476190 0.238095 0.000000 0.285714 0.571429 0.000000 0.142857 0.285714 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HWGTGTAA MEME-2 regular expression -------------------------------------------------------------------------------- [ATC][AT]GTGTAA -------------------------------------------------------------------------------- Time 10.32 secs. ******************************************************************************** ******************************************************************************** MOTIF RRARAGAG MEME-3 width = 8 sites = 50 llr = 373 E-value = 2.1e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3676a:a1 pos.-specific C 1:1::::: probability G 6424:a:9 matrix T :::::::: bits 2.1 * 1.9 *** 1.7 *** 1.5 **** Relative 1.3 **** Entropy 1.1 * **** (10.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAAAAGAG consensus AGGG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:6947000-6947080 1 2.05e-05 . GAAAAGAG AAAGGTCAGC chrII:526540-526620 68 2.05e-05 CCTGACGCAA GAAAAGAG TTGGC chrII:7357314-7357394 70 2.05e-05 GAGCCAGAAG GAAAAGAG ACA chrIII:7397361-7397441 28 2.05e-05 ACAATGGATT GAAAAGAG TCGCAGATAT chrV:20409160-20409240 23 2.05e-05 GCGCTAAACC GAAAAGAG CACAGCTGCT chrX:3959387-3959467 12 5.68e-05 CCAAAAACTT GAAGAGAG GCTCGGAATG chrX:9933622-9933702 56 5.68e-05 TGGTTCACGA GAAGAGAG CACCACGTCT chrI:14384985-14385065 44 5.68e-05 CTCACCGGCA GAAGAGAG CAGGCTACTG chrII:11283146-11283226 28 5.68e-05 TACGAGATGT GAAGAGAG GGAAAAGACA chrX:12910083-12910163 18 5.68e-05 GTGGGGAAAT GGAAAGAG GTGCCTGAAG chrV:9239383-9239463 22 5.68e-05 GAGCGGATGG GAAGAGAG AAAAAGAAAG chrX:6962506-6962586 43 5.68e-05 TGGTCGTGAG GGAAAGAG AACTTTCCCG chrI:6250091-6250171 20 9.60e-05 GAGAAAGTGT AAAAAGAG TGACCGCGAT chrV:16836494-16836574 39 9.60e-05 TCAATTTGCA AAAAAGAG AGATATCAGA chrV:8667421-8667501 55 9.60e-05 CCGAAAAGCT GGAGAGAG AAAGATTGGT chrII:8126789-8126869 61 9.60e-05 ATCCGATTTC AAAAAGAG GTCAGCTGTG chrII:606283-606363 56 9.60e-05 CTCTGTCAAC AAAAAGAG CGCATATTCC chrX:1708910-1708990 20 9.60e-05 TACACTGTAC GGAGAGAG CAATTGGTTT chrX:5586876-5586956 41 9.60e-05 AGCTGACACA GGAGAGAG TGTGAAAAAG chrIII:9346890-9346970 44 9.60e-05 AGCAGCAGCC GGAGAGAG AGAGTCTCTT chrX:6388798-6388878 33 9.60e-05 GTAGAAGCGG AAAAAGAG AAGAAGCCCT chrX:4076113-4076193 1 1.55e-04 . AGAAAGAG GATGTAACCA chrX:6823468-6823548 35 1.55e-04 TGGGAGGAGG GAGAAGAG ATATCATTCG chrV:12896991-12897071 3 1.55e-04 CG AGAAAGAG AAATGCCCGC chrIV:10957756-10957836 63 1.55e-04 GGGAACTAAG AGAAAGAG CATTGAGCAC chrI:9298595-9298675 10 1.55e-04 TTGGATGGA AGAAAGAG AATGAGAGAG chrI:7507097-7507177 27 1.55e-04 GTTTCTGTGG GAGAAGAG CTACGGGATG chrIV:12192270-12192350 3 2.06e-04 TA AGAGAGAG AAGTAGAAGG chrX:9301976-9302056 18 2.06e-04 GCATTTGTCG GGGAAGAG GATGTAACTA chrII:1816233-1816313 21 2.64e-04 GGGTGGGAGA GAAAAGAA ACTGGGTGTT chrI:6925643-6925723 22 2.64e-04 GGATGCGAAC GGGGAGAG ATTCTCGAAA chrIII:7531532-7531612 1 2.64e-04 . GAAAAGAA GCCGCAAGAC chrIV:7942316-7942396 46 2.64e-04 CGCGGGATGG GAAAAGAA CAGGCAATGA chrII:1784486-1784566 27 2.64e-04 GTCAGGCAGA GGGGAGAG CAGCTGTTGA chrIV:9977750-9977830 42 2.64e-04 GGCTCACGGG AAGAAGAG CTATGAAAAG chrI:14632632-14632712 2 2.64e-04 C GAAAAGAA GCAATTGTGG chrII:14178735-14178815 14 2.83e-04 ATATTGTTTT CAAAAGAG CATCTGCTCG chrIV:16375330-16375410 51 2.83e-04 CCGCCTGCTC CAAAAGAG CAGCTGATGA chrIII:3643761-3643841 6 2.83e-04 CGGAG CAAAAGAG CAATGTGTAA chrIII:5975490-5975570 61 3.78e-04 AAGAGCAGTA AGGAAGAG CCAATGAGAA chrI:3837775-3837855 41 3.78e-04 CCGGTTTGAA AGGAAGAG TGTCAGCTGT chrX:3738782-3738862 40 3.95e-04 TTGACTGGCA GAACAGAG CACCTGCTGT chrII:7935781-7935861 38 3.95e-04 CGAGCCATCA GAACAGAG ACAGCTGACA chrX:3316606-3316686 42 5.21e-04 CAAAGATGCC GACGAGAG GTTCCTGCTC chrII:10039962-10040042 9 5.21e-04 CATCGAAG GACGAGAG ATGGAGAAGA chrI:13502588-13502668 36 5.21e-04 TTTTTGTAAA GGAGAGAA CTGGCTCACT chrII:2769232-2769312 57 5.21e-04 GGGGGATGAG AGGGAGAG CAAAAAACAT chrII:11275046-11275126 63 6.52e-04 GCACTTGCCC GAGAAGAA CTCTCGGGCA chrI:2861183-2861263 50 7.80e-04 GAAGAGATTT AGAGAGAA ATAGTGAAGC chrV:11919765-11919845 39 7.80e-04 TATAGTGGCT AACGAGAG TTGCGGATAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:6947000-6947080 2e-05 [+3]_72 chrII:526540-526620 2e-05 67_[+3]_5 chrII:7357314-7357394 2e-05 69_[+3]_3 chrIII:7397361-7397441 2e-05 27_[+3]_45 chrV:20409160-20409240 2e-05 22_[+3]_50 chrX:3959387-3959467 5.7e-05 11_[+3]_61 chrX:9933622-9933702 5.7e-05 55_[+3]_17 chrI:14384985-14385065 5.7e-05 43_[+3]_29 chrII:11283146-11283226 5.7e-05 27_[+3]_45 chrX:12910083-12910163 5.7e-05 17_[+3]_55 chrV:9239383-9239463 5.7e-05 21_[+3]_51 chrX:6962506-6962586 5.7e-05 42_[+3]_30 chrI:6250091-6250171 9.6e-05 19_[+3]_53 chrV:16836494-16836574 9.6e-05 38_[+3]_34 chrV:8667421-8667501 9.6e-05 54_[+3]_18 chrII:8126789-8126869 9.6e-05 60_[+3]_12 chrII:606283-606363 9.6e-05 55_[+3]_17 chrX:1708910-1708990 9.6e-05 19_[+3]_53 chrX:5586876-5586956 9.6e-05 40_[+3]_32 chrIII:9346890-9346970 9.6e-05 43_[+3]_29 chrX:6388798-6388878 9.6e-05 32_[+3]_40 chrX:4076113-4076193 0.00016 [+3]_72 chrX:6823468-6823548 0.00016 34_[+3]_38 chrV:12896991-12897071 0.00016 2_[+3]_70 chrIV:10957756-10957836 0.00016 62_[+3]_10 chrI:9298595-9298675 0.00016 9_[+3]_63 chrI:7507097-7507177 0.00016 26_[+3]_46 chrIV:12192270-12192350 0.00021 2_[+3]_70 chrX:9301976-9302056 0.00021 17_[+3]_55 chrII:1816233-1816313 0.00026 20_[+3]_52 chrI:6925643-6925723 0.00026 21_[+3]_51 chrIII:7531532-7531612 0.00026 [+3]_72 chrIV:7942316-7942396 0.00026 45_[+3]_27 chrII:1784486-1784566 0.00026 26_[+3]_46 chrIV:9977750-9977830 0.00026 41_[+3]_31 chrI:14632632-14632712 0.00026 1_[+3]_71 chrII:14178735-14178815 0.00028 13_[+3]_59 chrIV:16375330-16375410 0.00028 50_[+3]_22 chrIII:3643761-3643841 0.00028 5_[+3]_67 chrIII:5975490-5975570 0.00038 60_[+3]_12 chrI:3837775-3837855 0.00038 40_[+3]_32 chrX:3738782-3738862 0.0004 39_[+3]_33 chrII:7935781-7935861 0.0004 37_[+3]_35 chrX:3316606-3316686 0.00052 41_[+3]_31 chrII:10039962-10040042 0.00052 8_[+3]_64 chrI:13502588-13502668 0.00052 35_[+3]_37 chrII:2769232-2769312 0.00052 56_[+3]_16 chrII:11275046-11275126 0.00065 62_[+3]_10 chrI:2861183-2861263 0.00078 49_[+3]_23 chrV:11919765-11919845 0.00078 38_[+3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRARAGAG width=8 seqs=50 chrIV:6947000-6947080 ( 1) GAAAAGAG 1 chrII:526540-526620 ( 68) GAAAAGAG 1 chrII:7357314-7357394 ( 70) GAAAAGAG 1 chrIII:7397361-7397441 ( 28) GAAAAGAG 1 chrV:20409160-20409240 ( 23) GAAAAGAG 1 chrX:3959387-3959467 ( 12) GAAGAGAG 1 chrX:9933622-9933702 ( 56) GAAGAGAG 1 chrI:14384985-14385065 ( 44) GAAGAGAG 1 chrII:11283146-11283226 ( 28) GAAGAGAG 1 chrX:12910083-12910163 ( 18) GGAAAGAG 1 chrV:9239383-9239463 ( 22) GAAGAGAG 1 chrX:6962506-6962586 ( 43) GGAAAGAG 1 chrI:6250091-6250171 ( 20) AAAAAGAG 1 chrV:16836494-16836574 ( 39) AAAAAGAG 1 chrV:8667421-8667501 ( 55) GGAGAGAG 1 chrII:8126789-8126869 ( 61) AAAAAGAG 1 chrII:606283-606363 ( 56) AAAAAGAG 1 chrX:1708910-1708990 ( 20) GGAGAGAG 1 chrX:5586876-5586956 ( 41) GGAGAGAG 1 chrIII:9346890-9346970 ( 44) GGAGAGAG 1 chrX:6388798-6388878 ( 33) AAAAAGAG 1 chrX:4076113-4076193 ( 1) AGAAAGAG 1 chrX:6823468-6823548 ( 35) GAGAAGAG 1 chrV:12896991-12897071 ( 3) AGAAAGAG 1 chrIV:10957756-10957836 ( 63) AGAAAGAG 1 chrI:9298595-9298675 ( 10) AGAAAGAG 1 chrI:7507097-7507177 ( 27) GAGAAGAG 1 chrIV:12192270-12192350 ( 3) AGAGAGAG 1 chrX:9301976-9302056 ( 18) GGGAAGAG 1 chrII:1816233-1816313 ( 21) GAAAAGAA 1 chrI:6925643-6925723 ( 22) GGGGAGAG 1 chrIII:7531532-7531612 ( 1) GAAAAGAA 1 chrIV:7942316-7942396 ( 46) GAAAAGAA 1 chrII:1784486-1784566 ( 27) GGGGAGAG 1 chrIV:9977750-9977830 ( 42) AAGAAGAG 1 chrI:14632632-14632712 ( 2) GAAAAGAA 1 chrII:14178735-14178815 ( 14) CAAAAGAG 1 chrIV:16375330-16375410 ( 51) CAAAAGAG 1 chrIII:3643761-3643841 ( 6) CAAAAGAG 1 chrIII:5975490-5975570 ( 61) AGGAAGAG 1 chrI:3837775-3837855 ( 41) AGGAAGAG 1 chrX:3738782-3738862 ( 40) GAACAGAG 1 chrII:7935781-7935861 ( 38) GAACAGAG 1 chrX:3316606-3316686 ( 42) GACGAGAG 1 chrII:10039962-10040042 ( 9) GACGAGAG 1 chrI:13502588-13502668 ( 36) GGAGAGAA 1 chrII:2769232-2769312 ( 57) AGGGAGAG 1 chrII:11275046-11275126 ( 63) GAGAAGAA 1 chrI:2861183-2861263 ( 50) AGAGAGAA 1 chrV:11919765-11919845 ( 39) AACGAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.99899 E= 2.1e+003 24 -194 137 -1229 119 -1229 66 -1229 145 -194 -27 -1229 114 -252 58 -1229 188 -1229 -1229 -1229 -1229 -1229 205 -1229 188 -1229 -1229 -1229 -96 -1229 184 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 50 E= 2.1e+003 0.320000 0.060000 0.620000 0.000000 0.620000 0.000000 0.380000 0.000000 0.740000 0.060000 0.200000 0.000000 0.600000 0.040000 0.360000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.140000 0.000000 0.860000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRARAGAG MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AG][AG][AG]AGAG -------------------------------------------------------------------------------- Time 13.61 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTCTCTC MEME-4 width = 8 sites = 13 llr = 125 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::2:::: pos.-specific C 1::8:8:9 probability G :::::::: matrix T 9aa:a2a1 bits 2.1 1.9 ** * * 1.7 ** * ** 1.5 *** **** Relative 1.3 ******** Entropy 1.1 ******** (13.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTCTCTC consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:2520620-2520700 21 1.39e-05 CGAACCATtc tttctctc tatatctctc chrIII:8299244-8299324 22 1.39e-05 TGTCACTCTA TTTCTCTC ATCGGTCAGC chrX:2452474-2452554 28 1.39e-05 GCAGTTGCCC TTTCTCTC AGGTGACGCA chrV:753253-753333 63 1.39e-05 GAACTTTATT TTTCTCTC CGAAGCATCT chrIII:9701016-9701096 28 1.39e-05 CAACTCATGG TTTCTCTC ACGTTAAAAG chrX:14009660-14009740 6 1.39e-05 AGTTA TTTCTCTC TCCTCTCCAA chrIII:6820513-6820593 2 3.03e-05 A TTTATCTC TGCGTCTCTC chrIV:1790396-1790476 26 3.03e-05 CTGCACTCAA TTTATCTC TGGAGGTCGC chrV:13154293-13154373 18 3.03e-05 TTTATGCACT TTTATCTC AGAAGGGAAC chrIV:6603095-6603175 68 4.59e-05 TGGTATATCT TTTCTTTC TATTC chrX:5586876-5586956 12 4.59e-05 TCTCCGCGCT TTTCTTTC AGCAAATCAA chrIII:9346890-9346970 8 5.83e-05 GAAGCAT CTTCTCTC TGTATATTAA chrIV:379001-379081 62 7.39e-05 GTTTTCCTGA TTTCTCTT CTTCTTTTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:2520620-2520700 1.4e-05 20_[+4]_52 chrIII:8299244-8299324 1.4e-05 21_[+4]_51 chrX:2452474-2452554 1.4e-05 27_[+4]_45 chrV:753253-753333 1.4e-05 62_[+4]_10 chrIII:9701016-9701096 1.4e-05 27_[+4]_45 chrX:14009660-14009740 1.4e-05 5_[+4]_67 chrIII:6820513-6820593 3e-05 1_[+4]_71 chrIV:1790396-1790476 3e-05 25_[+4]_47 chrV:13154293-13154373 3e-05 17_[+4]_55 chrIV:6603095-6603175 4.6e-05 67_[+4]_5 chrX:5586876-5586956 4.6e-05 11_[+4]_61 chrIII:9346890-9346970 5.8e-05 7_[+4]_65 chrIV:379001-379081 7.4e-05 61_[+4]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTCTCTC width=8 seqs=13 chrX:2520620-2520700 ( 21) TTTCTCTC 1 chrIII:8299244-8299324 ( 22) TTTCTCTC 1 chrX:2452474-2452554 ( 28) TTTCTCTC 1 chrV:753253-753333 ( 63) TTTCTCTC 1 chrIII:9701016-9701096 ( 28) TTTCTCTC 1 chrX:14009660-14009740 ( 6) TTTCTCTC 1 chrIII:6820513-6820593 ( 2) TTTATCTC 1 chrIV:1790396-1790476 ( 26) TTTATCTC 1 chrV:13154293-13154373 ( 18) TTTATCTC 1 chrIV:6603095-6603175 ( 68) TTTCTTTC 1 chrX:5586876-5586956 ( 12) TTTCTTTC 1 chrIII:9346890-9346970 ( 8) CTTCTCTC 1 chrIV:379001-379081 ( 62) TTTCTCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.6191 E= 1.1e+004 -1035 -158 -1035 184 -1035 -1035 -1035 196 -1035 -1035 -1035 196 -23 174 -1035 -1035 -1035 -1035 -1035 196 -1035 188 -1035 -74 -1035 -1035 -1035 196 -1035 200 -1035 -174 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 1.1e+004 0.000000 0.076923 0.000000 0.923077 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.230769 0.769231 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.846154 0.000000 0.153846 0.000000 0.000000 0.000000 1.000000 0.000000 0.923077 0.000000 0.076923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTCTC MEME-4 regular expression -------------------------------------------------------------------------------- TTT[CA]TCTC -------------------------------------------------------------------------------- Time 16.78 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCTTCCC MEME-5 width = 8 sites = 2 llr = 23 E-value = 6.7e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C aaa::aaa probability G :::::::: matrix T :::aa::: bits 2.1 *** *** 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (16.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCCTTCCC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:89872-89952 17 9.85e-06 CATCATTTGT CCCTTCCC GATTACCAAC chrIII:1381158-1381238 39 9.85e-06 ATCCGTTGCT CCCTTCCC TCCTCATTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:89872-89952 9.9e-06 16_[+5]_56 chrIII:1381158-1381238 9.9e-06 38_[+5]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCTTCCC width=8 seqs=2 chrIV:89872-89952 ( 17) CCCTTCCC 1 chrIII:1381158-1381238 ( 39) CCCTTCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 6.7e+004 -765 211 -765 -765 -765 211 -765 -765 -765 211 -765 -765 -765 -765 -765 195 -765 -765 -765 195 -765 211 -765 -765 -765 211 -765 -765 -765 211 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 6.7e+004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCTTCCC MEME-5 regular expression -------------------------------------------------------------------------------- CCCTTCCC -------------------------------------------------------------------------------- Time 19.79 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:6388798-6388878 5.10e-02 32_[+3(9.60e-05)]_40 chrII:4293282-4293362 2.56e-02 4_[+1(6.82e-05)]_68 chrIII:2976335-2976415 2.54e-02 13_[+1(9.56e-05)]_59 chrII:8498332-8498412 7.19e-02 40_[+1(2.70e-05)]_32 chrIII:4049293-4049373 2.30e-01 80 chrI:8927409-8927489 1.58e-02 23_[+1(1.43e-05)]_49 chrIII:6822949-6823029 1.02e-01 28_[+1(1.43e-05)]_44 chrX:6962506-6962586 1.60e-02 42_[+3(5.68e-05)]_30 chrX:12416008-12416088 2.72e-01 80 chrIV:11922170-11922250 2.85e-01 80 chrX:1984990-1985070 2.39e-01 80 chrI:14632632-14632712 5.37e-02 80 chrI:9019105-9019185 3.81e-02 30_[+1(2.70e-05)]_42 chrIII:9346890-9346970 5.19e-03 7_[+4(5.83e-05)]_28_[+3(9.60e-05)]_\ 29 chrIII:3643761-3643841 4.11e-04 15_[+2(7.83e-05)]_46_[+1(1.43e-05)]_\ 3 chrV:14101142-14101222 2.64e-02 65_[+1(9.56e-05)]_7 chrIII:4360036-4360116 1.23e-01 80 chrX:15143949-15144029 1.63e-02 49_[+1(4.21e-05)]_23 chrII:907365-907445 9.77e-04 52_[+1(6.82e-05)]_6_[+2(2.09e-05)]_\ 6 chrIII:2683302-2683382 7.93e-04 2_[+2(2.09e-05)]_15_[+1(6.82e-05)]_\ 47 chrII:2769232-2769312 1.71e-01 80 chrX:5038934-5039014 6.79e-01 80 chrV:11919765-11919845 4.99e-03 56_[+1(9.56e-05)]_16 chrV:18713773-18713853 1.80e-01 80 chrI:7507097-7507177 1.66e-02 80 chrI:74715-74795 4.61e-02 39_[+1(6.82e-05)]_33 chrX:5586876-5586956 1.06e-04 11_[+4(4.59e-05)]_10_[+1(6.82e-05)]_\ 3_[+3(9.60e-05)]_32 chrIII:2440822-2440902 6.38e-02 33_[+1(2.70e-05)]_39 chrX:13773206-13773286 3.01e-02 25_[+1(2.70e-05)]_47 chrIII:8480477-8480557 3.11e-03 26_[+1(2.70e-05)]_46 chrIV:12621067-12621147 3.35e-01 80 chrX:3680708-3680788 1.28e-01 80 chrX:6733323-6733403 6.06e-01 80 chrX:5944942-5945022 2.01e-01 46_[+1(9.56e-05)]_26 chrIV:12614102-12614182 1.71e-01 32_[+1(4.21e-05)]_40 chrIV:9977750-9977830 9.18e-02 80 chrIV:1106137-1106217 3.65e-01 80 chrIII:9448625-9448705 1.34e-02 80 chrV:18598233-18598313 3.06e-01 80 chrX:6801713-6801793 4.58e-01 80 chrI:14167953-14168033 4.88e-02 36_[+1(9.56e-05)]_36 chrI:13502588-13502668 8.70e-03 80 chrX:7222014-7222094 2.13e-03 70_[+2(2.09e-05)]_2 chrX:5191667-5191747 1.19e-01 80 chrIII:12820073-12820153 1.13e-01 80 chrX:4435378-4435458 1.28e-01 80 chrX:7162913-7162993 2.05e-01 80 chrX:3976874-3976954 5.62e-01 80 chrI:9947883-9947963 2.78e-02 80 chrIII:4359369-4359449 4.75e-02 28_[+1(1.43e-05)]_44 chrII:11234925-11235005 3.42e-01 80 chrV:11958539-11958619 2.11e-02 80 chrI:3837775-3837855 5.28e-04 51_[+1(1.43e-05)]_7_[+2(7.83e-05)]_\ 6 chrII:6936665-6936745 1.87e-01 28_[+1(6.82e-05)]_44 chrII:4906663-4906743 2.08e-02 80 chrIII:8867164-8867244 7.00e-01 80 chrV:7821555-7821635 3.67e-01 80 chrII:7935781-7935861 2.59e-03 46_[+1(6.82e-05)]_26 chrV:4485388-4485468 3.38e-01 80 chrIII:10666815-10666895 1.47e-01 80 chrI:14526960-14527040 6.98e-01 80 chrIII:2700753-2700833 1.04e-01 80 chrX:300441-300521 3.45e-01 80 chrI:5536053-5536133 4.47e-01 80 chrX:3861457-3861537 1.50e-01 17_[+1(1.43e-05)]_38_[+1(1.43e-05)]_\ 9 chrX:6915459-6915539 8.99e-03 47_[+1(1.43e-05)]_25 chrV:11429928-11430008 1.41e-01 80 chrIII:5486486-5486566 3.61e-02 66_[+1(6.82e-05)]_6 chrIII:2618886-2618966 3.23e-02 27_[+1(1.43e-05)]_45 chrII:4517413-4517493 8.87e-01 80 chrIV:16375330-16375410 1.11e-02 58_[+1(4.21e-05)]_14 chrX:5806262-5806342 5.29e-03 41_[+2(2.09e-05)]_31 chrI:271012-271092 4.37e-03 54_[+1(6.82e-05)]_10_[+4(9.23e-05)] chrX:14009660-14009740 1.13e-03 5_[+4(1.39e-05)]_67 chrV:20409160-20409240 4.93e-03 22_[+3(2.05e-05)]_2_[+1(6.82e-05)]_\ 40 chrI:8044310-8044390 1.21e-01 80 chrV:16234428-16234508 2.81e-01 80 chrV:8195061-8195141 4.33e-01 80 chrIII:6639202-6639282 1.20e-01 80 chrII:4519099-4519179 5.53e-01 80 chrIII:1381158-1381238 2.09e-03 38_[+5(9.85e-06)]_34 chrII:4572738-4572818 1.17e-02 4_[+1(9.56e-05)]_68 chrV:20920569-20920649 3.09e-01 80 chrIII:8286983-8287063 3.77e-01 80 chrX:7217323-7217403 1.69e-01 80 chrIII:7397361-7397441 6.83e-03 27_[+3(2.05e-05)]_45 chrIV:7849394-7849474 3.34e-02 30_[+1(7.96e-05)]_3_[+1(2.70e-05)]_\ 31 chrX:16388519-16388599 1.47e-01 80 chrIII:9701016-9701096 4.90e-03 27_[+4(1.39e-05)]_23_[+1(7.96e-05)]_\ 14 chrV:15658825-15658905 6.35e-03 58_[+1(1.43e-05)]_14 chrII:13008221-13008301 7.57e-02 80 chrX:12248314-12248394 1.41e-02 66_[+1(1.43e-05)]_6 chrX:1708910-1708990 2.33e-03 19_[+3(9.60e-05)]_40_[+1(1.43e-05)]_\ 5 chrX:4784964-4785044 3.09e-02 30_[+1(2.70e-05)]_42 chrX:9638595-9638675 1.13e-01 21_[+1(7.96e-05)]_51 chrX:11193876-11193956 1.38e-01 80 chrII:11766195-11766275 1.28e-01 37_[+1(6.82e-05)]_35 chrII:1784486-1784566 1.03e-02 34_[+1(1.43e-05)]_38 chrIV:8121139-8121219 1.87e-01 40_[+1(6.82e-05)]_32 chrII:9142523-9142603 1.92e-02 22_[+2(5.84e-05)]_50 chrV:13154293-13154373 4.51e-02 17_[+4(3.03e-05)]_55 chrI:14837262-14837342 1.52e-02 7_[+1(1.43e-05)]_65 chrIV:7942316-7942396 7.32e-02 80 chrX:14659620-14659700 6.96e-02 80 chrI:11755460-11755540 3.03e-02 30_[+1(4.21e-05)]_42 chrII:2459881-2459961 5.61e-03 41_[+2(5.84e-05)]_31 chrX:16044467-16044547 7.49e-02 62_[+5(6.65e-05)]_10 chrX:4279316-4279396 3.65e-01 80 chrI:955543-955623 7.61e-01 80 chrX:7522712-7522792 4.33e-02 80 chrV:753253-753333 9.53e-06 33_[+1(1.43e-05)]_21_[+4(1.39e-05)]_\ 10 chrIV:10665810-10665890 5.16e-01 80 chrX:6144653-6144733 5.10e-01 80 chrI:3899429-3899509 1.01e-03 50_[+2(2.09e-05)]_8_[+1(7.96e-05)]_\ 6 chrIV:12216056-12216136 1.09e-01 80 chrI:6000359-6000439 7.17e-02 6_[+1(2.70e-05)]_66 chrII:7357314-7357394 3.90e-02 69_[+3(2.05e-05)]_3 chrIV:1790396-1790476 7.12e-03 25_[+4(3.03e-05)]_47 chrV:9239383-9239463 4.59e-03 21_[+3(5.68e-05)]_21_[+1(1.43e-05)]_\ 22 chrIII:7530336-7530416 5.34e-02 68_[+1(6.82e-05)]_4 chrIII:5975490-5975570 5.54e-02 80 chrX:5591527-5591607 2.29e-02 55_[+1(1.43e-05)]_17 chrII:10039962-10040042 8.13e-02 80 chrX:9301976-9302056 1.37e-01 80 chrII:7962350-7962430 2.46e-02 25_[+1(1.43e-05)]_47 chrIII:9346300-9346380 2.78e-01 80 chrIV:9645349-9645429 4.06e-02 36_[+1(1.43e-05)]_36 chrI:6893279-6893359 5.28e-02 80 chrX:16391311-16391391 2.20e-01 80 chrX:12910083-12910163 4.92e-02 17_[+3(5.68e-05)]_55 chrIII:7215742-7215822 8.04e-01 80 chrV:13395522-13395602 4.27e-02 80 chrX:2452474-2452554 7.73e-04 27_[+4(1.39e-05)]_45 chrV:5667118-5667198 9.67e-02 80 chrX:16321475-16321555 1.56e-02 3_[+1(4.21e-05)]_69 chrV:1152018-1152098 1.81e-02 66_[+1(7.96e-05)]_6 chrX:7225167-7225247 3.08e-01 80 chrV:11917802-11917882 6.20e-02 7_[+1(1.43e-05)]_65 chrI:11559388-11559468 1.52e-01 29_[+1(7.96e-05)]_43 chrII:11575093-11575173 2.30e-01 80 chrII:11188214-11188294 9.43e-02 80 chrII:909671-909751 9.28e-03 51_[+1(1.43e-05)]_21 chrIII:11410564-11410644 4.44e-02 80 chrI:2861183-2861263 1.93e-01 80 chrIV:606266-606346 3.74e-02 35_[+1(6.82e-05)]_37 chrIII:7531532-7531612 3.02e-02 80 chrV:13473610-13473690 1.24e-01 28_[+1(6.82e-05)]_44 chrX:46390-46470 6.69e-02 59_[+1(9.56e-05)]_13 chrX:7945597-7945677 1.13e-01 10_[+1(9.56e-05)]_62 chrX:14039448-14039528 1.87e-01 80 chrIV:6135742-6135822 4.03e-01 80 chrIII:8299244-8299324 1.91e-03 21_[+4(1.39e-05)]_51 chrX:2614325-2614405 5.30e-01 80 chrX:16088038-16088118 2.55e-02 80 chrIII:7907526-7907606 2.32e-01 80 chrI:9298595-9298675 1.22e-02 69_[+1(6.82e-05)]_3 chrII:7415691-7415771 4.53e-02 44_[+1(6.82e-05)]_28 chrII:11283146-11283226 1.01e-02 27_[+3(5.68e-05)]_45 chrII:11555824-11555904 3.17e-02 80 chrII:606283-606363 2.00e-01 55_[+3(9.60e-05)]_17 chrV:9550038-9550118 2.38e-03 27_[+2(5.84e-05)]_10_[+1(6.82e-05)]_\ 27 chrII:12952329-12952409 2.79e-02 37_[+1(1.43e-05)]_35 chrII:6788834-6788914 2.27e-01 80 chrIV:10957756-10957836 2.83e-01 80 chrV:12896991-12897071 4.31e-03 29_[+1(6.82e-05)]_43 chrI:14963627-14963707 9.99e-01 80 chrV:6457048-6457128 3.34e-02 80 chrX:6823468-6823548 2.20e-01 80 chrIV:10958347-10958427 9.14e-02 80 chrIII:1372735-1372815 1.14e-02 27_[+1(6.82e-05)]_45 chrIII:5307861-5307941 9.18e-02 48_[+1(1.43e-05)]_24 chrIII:930498-930578 2.27e-01 28_[+1(9.56e-05)]_44 chrII:526540-526620 1.70e-04 4_[+2(2.09e-05)]_55_[+3(2.05e-05)]_\ 5 chrI:6925643-6925723 6.53e-03 80 chrIV:379001-379081 4.60e-02 61_[+4(7.39e-05)]_11 chrII:11275659-11275739 1.79e-01 80 chrII:8894791-8894871 1.51e-01 80 chrIII:8501502-8501582 4.70e-01 80 chrIII:981350-981430 9.93e-03 26_[+1(1.43e-05)]_46 chrX:9669910-9669990 3.43e-01 80 chrIII:5418104-5418184 5.00e-01 80 chrX:5259563-5259643 2.59e-01 80 chrX:812428-812508 1.19e-01 67_[+1(6.82e-05)]_5 chrIV:314624-314704 1.95e-02 80 chrI:13038208-13038288 2.93e-02 80 chrV:10342607-10342687 4.25e-02 80 chrX:2050420-2050500 3.06e-01 80 chrII:2488573-2488653 6.17e-02 54_[+1(1.43e-05)]_18 chrX:1115382-1115462 6.56e-02 31_[+1(7.96e-05)]_41 chrX:3267620-3267700 8.54e-02 80 chrIV:11779201-11779281 3.21e-02 32_[+1(2.70e-05)]_40 chrX:8786826-8786906 2.27e-01 80 chrX:3440009-3440089 6.19e-01 80 chrIV:6947000-6947080 9.89e-04 [+3(2.05e-05)]_6_[+1(2.70e-05)]_58 chrI:14384985-14385065 8.56e-02 43_[+3(5.68e-05)]_29 chrII:683654-683734 2.56e-01 80 chrIV:5820254-5820334 1.36e-01 80 chrIV:9079466-9079546 2.33e-02 17_[+1(9.56e-05)]_55 chrII:13394420-13394500 6.47e-01 80 chrX:9933622-9933702 1.76e-02 55_[+3(5.68e-05)]_17 chrII:11275046-11275126 7.77e-02 80 chrII:6545170-6545250 1.54e-01 80 chrIII:8302257-8302337 3.50e-01 80 chrI:11807896-11807976 3.49e-03 37_[+1(6.82e-05)]_35 chrX:4429537-4429617 5.31e-01 80 chrIV:6140835-6140915 1.89e-01 80 chrIV:6603095-6603175 2.50e-03 67_[+4(4.59e-05)]_5 chrIII:6820513-6820593 1.93e-02 1_[+4(3.03e-05)]_71 chrI:6155754-6155834 8.96e-02 72_[+1(6.82e-05)] chrIV:9976764-9976844 8.76e-03 37_[+2(5.84e-05)]_35 chrII:8126789-8126869 1.33e-02 60_[+3(9.60e-05)]_12 chrI:12094733-12094813 2.55e-01 80 chrV:20850754-20850834 3.29e-02 55_[+1(6.82e-05)]_17 chrIV:2136766-2136846 5.72e-01 80 chrV:8667421-8667501 8.19e-02 54_[+3(9.60e-05)]_18 chrX:4895418-4895498 2.97e-01 80 chrI:5189236-5189316 4.59e-01 80 chrX:9735608-9735688 3.10e-01 80 chrI:9550880-9550960 6.30e-01 80 chrV:16836494-16836574 2.48e-02 38_[+3(9.60e-05)]_34 chrII:14178735-14178815 5.41e-03 40_[+1(6.82e-05)]_32 chrX:6509918-6509998 1.38e-01 80 chrX:1191677-1191757 6.97e-02 80 chrIV:89872-89952 1.96e-03 16_[+5(9.85e-06)]_6_[+1(9.56e-05)]_\ 42 chrI:8902598-8902678 8.77e-03 35_[+1(2.70e-05)]_37 chrII:1816233-1816313 1.42e-04 53_[+1(1.43e-05)]_11_[+2(2.09e-05)] chrX:6597265-6597345 2.41e-02 56_[+1(6.82e-05)]_16 chrX:3738782-3738862 8.63e-02 80 chrX:3316606-3316686 2.44e-02 15_[+1(9.56e-05)]_57 chrI:640146-640226 2.72e-02 26_[+1(1.43e-05)]_46 chrV:8659495-8659575 2.06e-01 80 chrX:3959387-3959467 1.85e-04 11_[+3(5.68e-05)]_38_[+1(1.43e-05)]_\ 15 chrIII:3991533-3991613 8.70e-01 80 chrIV:8068431-8068511 1.49e-03 25_[+1(1.43e-05)]_47 chrII:4676385-4676465 9.97e-02 36_[+1(6.82e-05)]_36 chrX:2520620-2520700 7.46e-02 20_[+4(1.39e-05)]_10_[+4(7.39e-05)]_\ 34 chrIV:13021912-13021992 2.31e-01 80 chrII:13472219-13472299 1.83e-01 80 chrIII:9118573-9118653 1.16e-01 80 chrI:11993792-11993872 2.05e-02 37_[+1(9.56e-05)]_35 chrV:3187954-3188034 4.72e-02 80 chrIV:3654987-3655067 9.66e-02 21_[+1(9.56e-05)]_51 chrX:6957167-6957247 3.68e-01 80 chrX:4076113-4076193 9.18e-02 80 chrII:3596122-3596202 1.41e-02 21_[+1(1.43e-05)]_51 chrIII:13063144-13063224 1.80e-01 2_[+1(6.82e-05)]_70 chrX:15565489-15565569 7.77e-02 19_[+1(6.82e-05)]_53 chrI:6250091-6250171 6.09e-05 13_[+2(2.09e-05)]_22_[+1(1.43e-05)]_\ 21_[+2(2.09e-05)] chrIV:12192270-12192350 4.30e-03 31_[+1(1.43e-05)]_41 chrX:13174622-13174702 2.23e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n08.farnam.hpc.yale.internal ********************************************************************************