******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/fkh-4.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:9167092-9167172 1.0000 80 chrX:13212693-13212773 1.0000 80 chrV:5304546-5304626 1.0000 80 chrV:10286009-10286089 1.0000 80 chrI:8687252-8687332 1.0000 80 chrX:11597017-11597097 1.0000 80 chrV:8556114-8556194 1.0000 80 chrI:5962161-5962241 1.0000 80 chrX:845593-845673 1.0000 80 chrV:3821059-3821139 1.0000 80 chrV:10464325-10464405 1.0000 80 chrX:5260548-5260628 1.0000 80 chrX:4296061-4296141 1.0000 80 chrV:10065849-10065929 1.0000 80 chrV:12751814-12751894 1.0000 80 chrV:1307906-1307986 1.0000 80 chrIV:11569941-11570021 1.0000 80 chrI:3419262-3419342 1.0000 80 chrX:3709918-3709998 1.0000 80 chrIV:3853715-3853795 1.0000 80 chrX:3937655-3937735 1.0000 80 chrV:4864493-4864573 1.0000 80 chrX:16117317-16117397 1.0000 80 chrV:4868866-4868946 1.0000 80 chrII:4906017-4906097 1.0000 80 chrI:3644953-3645033 1.0000 80 chrX:9719236-9719316 1.0000 80 chrV:9292090-9292170 1.0000 80 chrI:2458767-2458847 1.0000 80 chrX:1053116-1053196 1.0000 80 chrV:20555292-20555372 1.0000 80 chrIII:6740241-6740321 1.0000 80 chrX:9597431-9597511 1.0000 80 chrX:16995663-16995743 1.0000 80 chrI:9016321-9016401 1.0000 80 chrI:4943019-4943099 1.0000 80 chrIV:8136734-8136814 1.0000 80 chrX:16532676-16532756 1.0000 80 chrV:8600107-8600187 1.0000 80 chrII:2439105-2439185 1.0000 80 chrX:16530621-16530701 1.0000 80 chrII:12346426-12346506 1.0000 80 chrV:9271999-9272079 1.0000 80 chrV:6753413-6753493 1.0000 80 chrX:14055873-14055953 1.0000 80 chrI:3472850-3472930 1.0000 80 chrV:8471057-8471137 1.0000 80 chrV:2204245-2204325 1.0000 80 chrIV:10489585-10489665 1.0000 80 chrX:15224272-15224352 1.0000 80 chrIII:4647484-4647564 1.0000 80 chrIV:82482-82562 1.0000 80 chrX:5565651-5565731 1.0000 80 chrV:8171846-8171926 1.0000 80 chrIV:14379367-14379447 1.0000 80 chrIV:81075-81155 1.0000 80 chrV:7554094-7554174 1.0000 80 chrV:211564-211644 1.0000 80 chrV:5039737-5039817 1.0000 80 chrIV:15280378-15280458 1.0000 80 chrV:8683910-8683990 1.0000 80 chrX:16958162-16958242 1.0000 80 chrI:10077634-10077714 1.0000 80 chrII:4658403-4658483 1.0000 80 chrIII:6155918-6155998 1.0000 80 chrX:12928906-12928986 1.0000 80 chrX:6407972-6408052 1.0000 80 chrI:7945565-7945645 1.0000 80 chrIV:13009658-13009738 1.0000 80 chrII:2206236-2206316 1.0000 80 chrII:9987007-9987087 1.0000 80 chrII:129948-130028 1.0000 80 chrV:5447217-5447297 1.0000 80 chrV:11133661-11133741 1.0000 80 chrII:10899152-10899232 1.0000 80 chrIII:10519045-10519125 1.0000 80 chrII:10680307-10680387 1.0000 80 chrX:5580022-5580102 1.0000 80 chrX:7447507-7447587 1.0000 80 chrX:6221259-6221339 1.0000 80 chrIV:2298538-2298618 1.0000 80 chrV:12663521-12663601 1.0000 80 chrX:16122801-16122881 1.0000 80 chrV:16835127-16835207 1.0000 80 chrV:10684902-10684982 1.0000 80 chrX:3711850-3711930 1.0000 80 chrIV:11785635-11785715 1.0000 80 chrX:4464523-4464603 1.0000 80 chrIII:7879087-7879167 1.0000 80 chrIV:5528469-5528549 1.0000 80 chrII:5220788-5220868 1.0000 80 chrIV:10804123-10804203 1.0000 80 chrIII:8371769-8371849 1.0000 80 chrIII:8535603-8535683 1.0000 80 chrX:11592698-11592778 1.0000 80 chrIII:9972538-9972618 1.0000 80 chrI:4080505-4080585 1.0000 80 chrV:13161190-13161270 1.0000 80 chrV:6769606-6769686 1.0000 80 chrIII:5872419-5872499 1.0000 80 chrX:4107092-4107172 1.0000 80 chrV:7556022-7556102 1.0000 80 chrI:9848433-9848513 1.0000 80 chrII:8644111-8644191 1.0000 80 chrIV:6748674-6748754 1.0000 80 chrX:2538882-2538962 1.0000 80 chrIII:5980684-5980764 1.0000 80 chrII:11659166-11659246 1.0000 80 chrIV:3168811-3168891 1.0000 80 chrI:436996-437076 1.0000 80 chrIV:10512973-10513053 1.0000 80 chrX:4653125-4653205 1.0000 80 chrX:11753329-11753409 1.0000 80 chrX:17528260-17528340 1.0000 80 chrX:15034275-15034355 1.0000 80 chrX:1086560-1086640 1.0000 80 chrX:14401413-14401493 1.0000 80 chrIII:5976180-5976260 1.0000 80 chrI:9426903-9426983 1.0000 80 chrX:6436595-6436675 1.0000 80 chrV:5302419-5302499 1.0000 80 chrX:13567645-13567725 1.0000 80 chrV:11506430-11506510 1.0000 80 chrIII:3590536-3590616 1.0000 80 chrX:3907518-3907598 1.0000 80 chrX:15032922-15033002 1.0000 80 chrX:15034924-15035004 1.0000 80 chrV:13832866-13832946 1.0000 80 chrI:5871581-5871661 1.0000 80 chrII:3265215-3265295 1.0000 80 chrV:19595039-19595119 1.0000 80 chrI:14937466-14937546 1.0000 80 chrIV:3894121-3894201 1.0000 80 chrII:160733-160813 1.0000 80 chrIV:10046103-10046183 1.0000 80 chrIV:1895152-1895232 1.0000 80 chrIV:9817305-9817385 1.0000 80 chrII:14646525-14646605 1.0000 80 chrV:14909613-14909693 1.0000 80 chrII:8784392-8784472 1.0000 80 chrX:5193642-5193722 1.0000 80 chrI:434657-434737 1.0000 80 chrIV:2778660-2778740 1.0000 80 chrV:13265768-13265848 1.0000 80 chrV:13517202-13517282 1.0000 80 chrII:6161845-6161925 1.0000 80 chrI:6250107-6250187 1.0000 80 chrV:5010929-5011009 1.0000 80 chrI:7375079-7375159 1.0000 80 chrIII:5710087-5710167 1.0000 80 chrX:8118079-8118159 1.0000 80 chrIV:1904296-1904376 1.0000 80 chrIII:1922694-1922774 1.0000 80 chrII:1276929-1277009 1.0000 80 chrX:8729186-8729266 1.0000 80 chrV:9283586-9283666 1.0000 80 chrV:5217626-5217706 1.0000 80 chrX:9654395-9654475 1.0000 80 chrII:11064321-11064401 1.0000 80 chrI:4944339-4944419 1.0000 80 chrI:10506347-10506427 1.0000 80 chrIII:4519608-4519688 1.0000 80 chrIII:5422886-5422966 1.0000 80 chrII:2687099-2687179 1.0000 80 chrIV:9525875-9525955 1.0000 80 chrI:5311156-5311236 1.0000 80 chrX:3255954-3256034 1.0000 80 chrIII:482897-482977 1.0000 80 chrX:3375430-3375510 1.0000 80 chrII:6373279-6373359 1.0000 80 chrV:16598643-16598723 1.0000 80 chrX:9782514-9782594 1.0000 80 chrIV:7767121-7767201 1.0000 80 chrII:7360648-7360728 1.0000 80 chrIII:12904295-12904375 1.0000 80 chrX:8204667-8204747 1.0000 80 chrII:8215410-8215490 1.0000 80 chrII:13788979-13789059 1.0000 80 chrX:6652839-6652919 1.0000 80 chrX:15014590-15014670 1.0000 80 chrV:9798334-9798414 1.0000 80 chrX:3502932-3503012 1.0000 80 chrI:13528224-13528304 1.0000 80 chrI:7043372-7043452 1.0000 80 chrX:16448653-16448733 1.0000 80 chrX:11459053-11459133 1.0000 80 chrI:6238463-6238543 1.0000 80 chrI:9172560-9172640 1.0000 80 chrIII:9082578-9082658 1.0000 80 chrV:976795-976875 1.0000 80 chrV:12636493-12636573 1.0000 80 chrII:4507027-4507107 1.0000 80 chrIII:12673536-12673616 1.0000 80 chrX:2438599-2438679 1.0000 80 chrV:154717-154797 1.0000 80 chrV:6721403-6721483 1.0000 80 chrX:3904733-3904813 1.0000 80 chrIII:3343469-3343549 1.0000 80 chrII:11607628-11607708 1.0000 80 chrX:5348725-5348805 1.0000 80 chrII:7283160-7283240 1.0000 80 chrV:18581910-18581990 1.0000 80 chrII:13839585-13839665 1.0000 80 chrX:7063459-7063539 1.0000 80 chrI:7938459-7938539 1.0000 80 chrV:6342704-6342784 1.0000 80 chrIII:8759853-8759933 1.0000 80 chrI:8407117-8407197 1.0000 80 chrI:11203243-11203323 1.0000 80 chrX:13253470-13253550 1.0000 80 chrX:2763528-2763608 1.0000 80 chrX:17062339-17062419 1.0000 80 chrIV:2284811-2284891 1.0000 80 chrX:12183140-12183220 1.0000 80 chrV:9465711-9465791 1.0000 80 chrX:2190880-2190960 1.0000 80 chrV:9446150-9446230 1.0000 80 chrI:4941236-4941316 1.0000 80 chrII:8962395-8962475 1.0000 80 chrX:7264766-7264846 1.0000 80 chrV:7023202-7023282 1.0000 80 chrX:14185732-14185812 1.0000 80 chrX:11470418-11470498 1.0000 80 chrII:14668198-14668278 1.0000 80 chrI:7373233-7373313 1.0000 80 chrIII:5500882-5500962 1.0000 80 chrX:15556152-15556232 1.0000 80 chrI:9150395-9150475 1.0000 80 chrIV:3844169-3844249 1.0000 80 chrIII:13187905-13187985 1.0000 80 chrX:10387329-10387409 1.0000 80 chrIII:12141708-12141788 1.0000 80 chrIII:12058602-12058682 1.0000 80 chrIII:8762304-8762384 1.0000 80 chrI:7040825-7040905 1.0000 80 chrIV:7659553-7659633 1.0000 80 chrX:12713106-12713186 1.0000 80 chrX:2854147-2854227 1.0000 80 chrIV:13989084-13989164 1.0000 80 chrX:5243732-5243812 1.0000 80 chrII:9264838-9264918 1.0000 80 chrII:15089575-15089655 1.0000 80 chrIII:3435787-3435867 1.0000 80 chrI:11693674-11693754 1.0000 80 chrIII:4905497-4905577 1.0000 80 chrI:2045074-2045154 1.0000 80 chrV:5444184-5444264 1.0000 80 chrX:15039201-15039281 1.0000 80 chrIII:8296446-8296526 1.0000 80 chrV:12636698-12636778 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_fkh-4/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/fkh-4.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.297 C 0.195 G 0.198 T 0.31 Background letter frequencies (from file dataset with add-one prior applied): A 0.297 C 0.195 G 0.198 T 0.31 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF MCAKMTGK MEME-1 width = 8 sites = 170 llr = 1170 E-value = 1.6e-100 ******************************************************************************** -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 4:a:5::1 pos.-specific C 3a:24::1 probability G 1::31:a4 matrix T 1::5:a:4 bits 2.4 * * 2.1 * * 1.9 * * 1.7 ** ** Relative 1.4 ** ** Entropy 1.2 ** ** (9.9 bits) 0.9 ** ** 0.7 ** *** 0.5 ****** 0.2 ******** 0.0 -------- Multilevel ACATATGT consensus C GC G sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrV:9446150-9446230 30 8.30e-06 CAGATGTTTC CCATCTGG TTTAATTTTC chrI:7938459-7938539 20 8.30e-06 GTAGAGGAGC CCATCTGG GAATGAGCAC chrV:976795-976875 47 8.30e-06 AAATAAAATG CCATCTGG AACCAATTGA chrIV:9817305-9817385 28 8.30e-06 GGTTTTTCTC CCATCTGG TTTCAATTTT chrIV:1895152-1895232 14 8.30e-06 CCTGTCCTCA CCATCTGG TGATCACAct chrIV:3168811-3168891 16 8.30e-06 TAGTCACCTA CCATCTGG TAATGATCTA chrV:9271999-9272079 18 8.30e-06 AAAATTAGAA CCATCTGG TGAACGCCCA chrV:10065849-10065929 43 8.30e-06 TCAATCTGTT CCATCTGG CTCTAAACGT chrIV:1904296-1904376 8 2.62e-05 CTCCTTT CCATATGG CACGACTCTG chrI:9426903-9426983 48 2.62e-05 ACAGCAATGA CCATATGG AATTAATTTT chrIV:13009658-13009738 42 2.62e-05 CCATTGACCA CCATATGG ATCCCATTAA chrV:2204245-2204325 56 2.62e-05 AGGAAGTGGT CCAGCTGG ATAATTCCGT chrX:16995663-16995743 37 2.62e-05 TCAATTGATT CCATATGG TTCTCAGTTC chrIII:6740241-6740321 56 2.62e-05 TTTAAAGGGC CCATATGG AAAAGTTTAG chrV:10286009-10286089 13 2.62e-05 GTGATTAGAA CCATATGG GAAAAAACTT chrX:5243732-5243812 57 5.99e-05 CAGTTACCAG CCATCTGT TGTCGCCAAA chrX:17062339-17062419 50 5.99e-05 TGCCGTTTAC CCATCTGT TATGAAAAAA chrIII:8759853-8759933 31 5.99e-05 GAGAAGATCA CCATCTGT CATGTAGTTC chrV:16598643-16598723 59 5.99e-05 TCAAAGTAGA ACATCTGG AAGTGATGGG chrIII:4519608-4519688 29 5.99e-05 GCCTTGTGTG CCATCTGT CCTCCATCAT chrX:8118079-8118159 16 5.99e-05 AATCCTGAGA ACATCTGG AGACAATTTC chrIII:5710087-5710167 63 5.99e-05 CAACATTTTG ACATCTGG AATTACTTAA chrV:5010929-5011009 4 5.99e-05 CAA ACATCTGG GAGATTATAC chrI:434657-434737 35 5.99e-05 TTCCAATTTT CCATCTGT TACCAATCAA chrI:14937466-14937546 35 5.99e-05 CTGTACCTAA ACATCTGG ATTGAATGAA chrX:1086560-1086640 13 5.99e-05 ATTTATTTGC ACATCTGG ATGGTATTAT chrIII:9972538-9972618 18 5.99e-05 AAACACAAGG ACATCTGG TTCTGGTTTC chrX:4464523-4464603 47 5.99e-05 TGAGCAAACG ACATCTGG TTTCTGTTTA chrII:10680307-10680387 18 5.99e-05 AGAAAGGGAC ACATCTGG TTATAATCAT chrII:9987007-9987087 24 5.99e-05 CCTCCTGAAA CCATCTGT TTTGCATAAC chrI:7945565-7945645 43 5.99e-05 GAGATGAAAA CCAGATGG GCGGCACATT chrX:16958162-16958242 28 5.99e-05 AAGATCAAAA ACATCTGG AACCATTCCC chrIV:15280378-15280458 44 5.99e-05 ATAAACTTGC ACATCTGG TTCCAATTTA chrX:14055873-14055953 49 5.99e-05 ATAATGTAAA CCAGATGG GCTTTTATGA chrI:9016321-9016401 38 5.99e-05 GGCTTTCAAA CCATCTGT TTTTCATCGA chrX:9597431-9597511 45 5.99e-05 TCCATCATTT CCATCTGT TTTAAATTAT chrI:3419262-3419342 33 5.99e-05 TGGGCAAAGG ACATCTGG ATCACATTCC chrV:12751814-12751894 48 5.99e-05 GTGGTAGAAC ACATCTGG AGATAATTTG chrX:5260548-5260628 44 5.99e-05 TTGAGTTTAG ACATCTGG CATTATCTAC chrI:6238463-6238543 34 1.15e-04 TTATTATTAT CCATATGT CTGCGTGTCC chrI:436996-437076 18 1.15e-04 GCAATTACCG ACATATGG AACCAATCGT chrV:7556022-7556102 61 1.15e-04 GTCATTGTTT CCAGCTGT TGCTGGTTAT chrIV:10804123-10804203 4 1.15e-04 TTA CCATATGT TGTCTCCCTC chrII:2206236-2206316 20 1.15e-04 AAACTTATAA ACATATGG TAGTTAAGCT chrI:8687252-8687332 31 1.15e-04 AGGAAAATTA ACATATGG AAATGATCAA chrIV:3844169-3844249 47 1.65e-04 TCGTTTCGAA CCAGATGT TGCCAAGAGG chrI:11203243-11203323 29 1.65e-04 AGAAACAAAG ACATCTGT CCTTCATCCA chrII:4507027-4507107 70 1.65e-04 AAGCTAAAGT CCAGATGT TTT chrV:12636493-12636573 59 1.65e-04 CGGAACCATC CCAGATGT CAGAATAAAG chrI:9172560-9172640 41 1.65e-04 TTTTCTATCT CCAGATGT TCATTTTCCA chrI:13528224-13528304 10 1.65e-04 GTGCATGTG ACATCTGT TTCCATGTAT chrII:2687099-2687179 19 1.65e-04 CTGACATCCG ACAGATGG ATCAAATTAG chrV:13832866-13832946 37 1.65e-04 GACTGGAGAA ACATCTGT CTTCAATATT chrX:6436595-6436675 25 1.65e-04 TATATTGTTT CCAGATGT TTGTCTACGC chrX:14401413-14401493 28 1.65e-04 AATCACCATC ACATCTGT TTCTGAGCAG chrIII:5980684-5980764 68 1.65e-04 GCAATAGGTA CCAGATGT GGAGC chrII:8644111-8644191 73 1.65e-04 CTCACAAGTA CCAGATGT chrX:11592698-11592778 40 1.65e-04 AAGTAGTCAG ACATCTGT TATCCATTAA chrIV:5528469-5528549 34 1.65e-04 GTAATAAAAA CCAGATGT TAAAGAAAGG chrIII:7879087-7879167 48 1.65e-04 ATAATCGGTG CCAGATGT TGTTTGAGCC chrX:6407972-6408052 32 1.65e-04 AAAATTGGCC CCAGATGT GTGTCTCGTA chrV:211564-211644 61 1.65e-04 AGTTCCGACT CCAGATGT TGTTCCAGTA chrIV:81075-81155 35 1.65e-04 CTCAGGGACC ACATCTGT TTCGTTGGAT chrX:15224272-15224352 57 1.65e-04 CTCATCAAAT CCAGATGT TTTGCATTTC chrX:16530621-16530701 45 1.65e-04 TTGGCCGTAT CCAGATGT CTCTGTATGT chrX:1053116-1053196 27 1.65e-04 CTCCTTTCCG ACATCTGT TTCAACCCGA chrV:10464325-10464405 21 1.65e-04 TGAATTGATT CCAGATGT TTGACGCAGC chrI:5962161-5962241 30 1.65e-04 ACATACACAA ACATCTGT TTTTGAACAA chrII:13839585-13839665 36 2.16e-04 TTCCCCACAC ACATATGT TTCCCATCAC chrII:8215410-8215490 66 2.16e-04 CAAAACATTT CCACATGG TGCATAG chrI:6250107-6250187 27 2.16e-04 GCGATCAGGA ACAGCTGT TTGTCAGCAG chrV:8171846-8171926 56 2.16e-04 CATGGTGGGA ACATATGT TTTATATTGT chrII:4906017-4906097 42 2.16e-04 TTTTTTCTTC ACATATGT TTTTAATGTT chrV:3821059-3821139 63 2.16e-04 GCTCTTAGAA ACATATGT TTTAAATTCT chrV:9283586-9283666 51 2.51e-04 CCGATTAGAC ACAGATGT GCTCCACCAC chrV:5039737-5039817 47 2.51e-04 AAAATGAATA ACAGATGT TTCTTGCTCC chrV:7554094-7554174 66 2.51e-04 CGCCCGACAA ACACCTGG TGGCAAT chrII:12346426-12346506 39 2.51e-04 GAAATCCGAC ACAGATGT TTTGAATTGC chrI:4943019-4943099 26 2.51e-04 GATATCGAAC ACAGATGT TATCGTCTTC chrV:4868866-4868946 22 2.51e-04 CATATGACAA ACAGATGT TTTAGAGCAC chrIV:2284811-2284891 19 2.76e-04 GTGACCACCG CCACATGT TTTAAATTTA chrIII:9082578-9082658 10 2.76e-04 AAATGGCTA CCACATGT CGGCTTCACG chrII:14646525-14646605 65 2.76e-04 GTGTCGCAAA ACACATGG GAAATGGG chrI:5871581-5871661 29 2.76e-04 ATATACACAA ACACATGG AAGTAATATT chrIII:5872419-5872499 18 2.76e-04 TCTCTGTTCG CCACATGT GTTGTGTAAT chrIII:8535603-8535683 9 2.76e-04 CGAAGTTT CCACATGT GTTTTCATTT chrV:20555292-20555372 16 2.76e-04 ATAAACAAAA CCACATGT TGCTAATGAA chrI:7373233-7373313 36 3.16e-04 TTATTGTCGT ACACATGT TTTCAATTTT chrII:11607628-11607708 17 3.16e-04 AACATTGGAA ACACATGT TTCATGAATG chrX:16448653-16448733 56 3.16e-04 TTGACTTCCA ACACATGT TTCCATTCTG chrII:13788979-13789059 46 3.16e-04 CCGTTTTTTC ACACATGT TTTGCGTCAT chrII:7360648-7360728 73 3.16e-04 TTGATTGGCA ACACATGT chrX:3255954-3256034 41 3.16e-04 GTGAGTCAAC GCATCTGG CAATCGGGCG chrIV:2778660-2778740 12 3.16e-04 AAAATTAGAA ACACATGT AGCTGTCACG chrX:17528260-17528340 50 3.16e-04 CGAATCTGAA ACACATGT GTTGTGCTCT chrII:11659166-11659246 37 3.16e-04 AAGAGCTGAA GCATCTGG AACCTATAAT chrI:9848433-9848513 31 3.16e-04 GTTGCTAACA ACACATGT GTGTCTACGT chrV:13161190-13161270 61 3.16e-04 CTCTTTTGAC ACACATGT TTTTGATCTA chrV:5447217-5447297 46 3.16e-04 GTGATTTGAA ACACATGT CTCTTCATGA chrII:2439105-2439185 69 3.16e-04 CCCTTATTCA ACACATGT GTCT chrV:9292090-9292170 70 3.16e-04 TTTGATGCTC GCATCTGG AAA chrV:5444184-5444264 52 3.42e-04 CGTGCCAAGA CCATGTGG AAGAGGAGAA chrX:15556152-15556232 2 3.42e-04 a gcagctgg atctaatttt chrV:154717-154797 46 3.42e-04 TTTTAAACTG GCATATGG TGAGTCAGAT chrX:3375430-3375510 41 3.42e-04 AAAGTTCAAA GCATATGG AAACAATCTT chrI:4944339-4944419 50 3.42e-04 CTGTCACTGA GCATATGG TAAGTACACA chrX:8729186-8729266 28 3.42e-04 CTTTTCAATT GCAGCTGG TTCGTATTAG chrI:2045074-2045154 43 3.77e-04 CTTTCACGGG GCAGATGG GCGTTTCGCC chrX:7063459-7063539 30 3.77e-04 TGTCTGTTGT GCATCTGT TTCAAATCAA chrX:5193642-5193722 52 3.77e-04 TTTAGCGGAA GCATCTGT ACTTGAGTAC chrX:9719236-9719316 56 3.77e-04 GTTTTCCTAA CCATCTGC TTTGTTACTC chrX:2763528-2763608 65 4.50e-04 GTTAGTTGGA ACATGTGG TTGCAATA chrX:9654395-9654475 70 4.50e-04 ATCGTTCAGG ACATGTGG CTT chrIII:4647484-4647564 61 4.50e-04 ATCCATTTTG GCAGCTGT TTCTTGTTAG chrX:2438599-2438679 70 5.05e-04 TAATAGAATA ACATCTGC TTT chrII:160733-160813 45 5.05e-04 CACCACCCAC CCAGGTGT TCGTAGATCA chrV:11506430-11506510 35 5.05e-04 TGAGCAGCTG ACATCTGC TCCTCATTTC chrIII:10519045-10519125 73 5.05e-04 TAAATGAGCT CCAGATGC chrI:3644953-3645033 26 5.05e-04 GAGATTAGTT GCAGATGT CGATTGCTTG chrX:11597017-11597097 2 5.05e-04 T ACATCTGC TTTAAGAGAA chrV:6342704-6342784 22 5.65e-04 GCAGAGCAAA ACAGCTGC TCGACGATGT chrV:6721403-6721483 59 5.65e-04 TACATCCATG CCACGTGG TATCAATTAC chrI:7375079-7375159 16 5.65e-04 CTCATAGTGC ACATGTGT TTTTCATCAA chrIII:8371769-8371849 37 5.65e-04 TCAATATGTC ACATGTGT TTGTGTCTTT chrX:3711850-3711930 63 5.65e-04 TTAAATAGTT ACAGCTGC AACTAATAAT chrX:6221259-6221339 38 5.65e-04 CCAGCATGAA GCACATGG AACTAGATAG chrV:4864493-4864573 15 5.65e-04 TTTAATCTTG ACATGTGT TCTGAATCAG chrIV:11569941-11570021 65 5.65e-04 GAAATCAAAT ACATATGC TTAATTCA chrV:5304546-5304626 69 5.65e-04 AAAATCAAGA ACATGTGT GTGT chrIII:3435787-3435867 13 6.03e-04 GGAATCACAA ACAGATGC TCCACCATCT chrX:11459053-11459133 37 6.03e-04 ATCATTAAAA ACAGATGC TATGCGATTC chrIV:3853715-3853795 51 6.03e-04 GAAATTGAGA ACAGATGC GGTGAGAGTA chrIII:13187905-13187985 26 6.53e-04 CCGATTTTGT CCACGTGT AGTACGTAGT chrII:10899152-10899232 50 6.53e-04 TTTGCAATCA ACACGTGG AATTAATTTC chrV:8600107-8600187 70 6.53e-04 TTGATGAGTT CCACGTGT TGT chrX:3937655-3937735 11 6.53e-04 TCAATCGAAA CCACATGC TGTCTCAGTA chrX:15034924-15035004 58 7.85e-04 TTCCACCCTC ACATCTGA GATTAATTGA chrX:2538882-2538962 54 7.85e-04 GAAATGTGAA CCAGATGA ATCAGAGTGT chrV:6753413-6753493 67 7.85e-04 CACATTGCAA ACACATGC ACAAGA chrIII:12058602-12058682 13 8.68e-04 CGGAAATTAA TCATCTGT GCAAACACGG chrX:11470418-11470498 38 8.68e-04 GAAATTCGAA ACATATGA TATTGGTATT chrI:4941236-4941316 54 8.68e-04 GACAAACGCA ACAGCTGA CCATTGGGTT chrIII:1922694-1922774 60 8.68e-04 GTATGAGATT ACATATGA ATTGGAGCTG chrIV:10489585-10489665 20 8.68e-04 GATCTTCGGA GCATGTGG TTCCGATTGA chrI:3472850-3472930 4 8.68e-04 CTG ACATATGA AGTCGATTAT chrI:9150395-9150475 35 9.52e-04 TTAATCAATT TCATATGT GGAATGATCG chrV:13517202-13517282 30 9.52e-04 CAATTTGACT TCATATGT TTTCAGTTTC chrIV:6748674-6748754 45 9.52e-04 TTAACACGAA ACAGATGA CCTTAGTTTG chrII:4658403-4658483 58 9.52e-04 GAAAAAAGAA ACAGATGA ACAAATATAT chrI:2458767-2458847 43 9.52e-04 TTAATTGGAA ACAGATGA TTATTCTTTT chrX:9782514-9782594 29 1.03e-03 ATGTCACTCG GCAGCTGC GCTCCGCCCA chrX:13212693-13212773 50 1.03e-03 TTCCAATCAA GCATGTGT TTCTGAACCG chrX:15039201-15039281 22 1.08e-03 GGAAGCCCCG TCACATGG GCTTATCCTC chrIV:7767121-7767201 59 1.08e-03 CCACTGTGTT GCAGATGC GGAGCACACA chrX:13567645-13567725 67 1.08e-03 TAAAGTTCAC TCACATGG TAGCAA chrIV:10512973-10513053 27 1.08e-03 ATGACTAAAA TCACATGG TTTAAGACGG chrV:8471057-8471137 32 1.08e-03 GAAATTGTTA GCAGATGC CAAAGAGCAC chrV:12636698-12636778 72 1.16e-03 TGCATTCAGC TCACATGT G chrV:5217626-5217706 33 1.20e-03 ctttctagct ccacgtgC AATCAGAAAC chrX:7447507-7447587 53 1.24e-03 TTTTGAAAAC GCAGCTGA ACCATTAAAC chrX:3502932-3503012 28 1.28e-03 ATTCATGTGA TCATGTGG CTTATATGCC chrX:12928906-12928986 68 1.28e-03 CCAATGAATG TCATGTGG TTCGC chrX:16532676-16532756 12 1.28e-03 TCCCATACCC TCATGTGG GGGGGGAGGG chrV:1307906-1307986 48 1.28e-03 TGAGGAGGTG TCATGTGG AAAATGAAAA chrX:8204667-8204747 41 1.32e-03 TAGATATCAA ACATGTGA ATAAGCTTAA chrV:18581910-18581990 11 1.39e-03 AAAATTAATG TCAGCTGC CGTCGTAGGG chrII:8784392-8784472 22 1.44e-03 GATTTATGTG GCACATGA AAATAATCAC chrX:15032922-15033002 65 1.44e-03 ATCCAAAGAT GCACATGA TCATTTTC chrIII:482897-482977 55 1.57e-03 TTGGAAATTG TCATATGA CACAGGAAGC chrI:4080505-4080585 34 1.57e-03 ATTCGTTTTC TCAGCTGA ATCTCTTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:9446150-9446230 8.3e-06 29_[+1]_43 chrI:7938459-7938539 8.3e-06 19_[+1]_53 chrV:976795-976875 8.3e-06 46_[+1]_26 chrIV:9817305-9817385 8.3e-06 27_[+1]_45 chrIV:1895152-1895232 8.3e-06 13_[+1]_59 chrIV:3168811-3168891 8.3e-06 15_[+1]_57 chrV:9271999-9272079 8.3e-06 17_[+1]_55 chrV:10065849-10065929 8.3e-06 42_[+1]_30 chrIV:1904296-1904376 2.6e-05 7_[+1]_65 chrI:9426903-9426983 2.6e-05 47_[+1]_25 chrIV:13009658-13009738 2.6e-05 41_[+1]_31 chrV:2204245-2204325 2.6e-05 55_[+1]_17 chrX:16995663-16995743 2.6e-05 36_[+1]_36 chrIII:6740241-6740321 2.6e-05 55_[+1]_17 chrV:10286009-10286089 2.6e-05 12_[+1]_60 chrX:5243732-5243812 6e-05 56_[+1]_16 chrX:17062339-17062419 6e-05 49_[+1]_23 chrIII:8759853-8759933 6e-05 30_[+1]_42 chrV:16598643-16598723 6e-05 58_[+1]_14 chrIII:4519608-4519688 6e-05 28_[+1]_44 chrX:8118079-8118159 6e-05 15_[+1]_57 chrIII:5710087-5710167 6e-05 62_[+1]_10 chrV:5010929-5011009 6e-05 3_[+1]_69 chrI:434657-434737 6e-05 34_[+1]_38 chrI:14937466-14937546 6e-05 34_[+1]_38 chrX:1086560-1086640 6e-05 12_[+1]_60 chrIII:9972538-9972618 6e-05 17_[+1]_55 chrX:4464523-4464603 6e-05 46_[+1]_26 chrII:10680307-10680387 6e-05 17_[+1]_55 chrII:9987007-9987087 6e-05 23_[+1]_49 chrI:7945565-7945645 6e-05 42_[+1]_30 chrX:16958162-16958242 6e-05 27_[+1]_45 chrIV:15280378-15280458 6e-05 43_[+1]_29 chrX:14055873-14055953 6e-05 48_[+1]_24 chrI:9016321-9016401 6e-05 37_[+1]_35 chrX:9597431-9597511 6e-05 44_[+1]_28 chrI:3419262-3419342 6e-05 32_[+1]_40 chrV:12751814-12751894 6e-05 47_[+1]_25 chrX:5260548-5260628 6e-05 43_[+1]_29 chrI:6238463-6238543 0.00012 33_[+1]_39 chrI:436996-437076 0.00012 17_[+1]_55 chrV:7556022-7556102 0.00012 60_[+1]_12 chrIV:10804123-10804203 0.00012 3_[+1]_69 chrII:2206236-2206316 0.00012 19_[+1]_53 chrI:8687252-8687332 0.00012 30_[+1]_42 chrIV:3844169-3844249 0.00017 46_[+1]_26 chrI:11203243-11203323 0.00017 28_[+1]_44 chrII:4507027-4507107 0.00017 69_[+1]_3 chrV:12636493-12636573 0.00017 58_[+1]_14 chrI:9172560-9172640 0.00017 40_[+1]_32 chrI:13528224-13528304 0.00017 9_[+1]_63 chrII:2687099-2687179 0.00017 18_[+1]_54 chrV:13832866-13832946 0.00017 36_[+1]_36 chrX:6436595-6436675 0.00017 24_[+1]_48 chrX:14401413-14401493 0.00017 27_[+1]_45 chrIII:5980684-5980764 0.00017 67_[+1]_5 chrII:8644111-8644191 0.00017 72_[+1] chrX:11592698-11592778 0.00017 39_[+1]_33 chrIV:5528469-5528549 0.00017 33_[+1]_39 chrIII:7879087-7879167 0.00017 47_[+1]_25 chrX:6407972-6408052 0.00017 31_[+1]_41 chrV:211564-211644 0.00017 60_[+1]_12 chrIV:81075-81155 0.00017 34_[+1]_38 chrX:15224272-15224352 0.00017 56_[+1]_16 chrX:16530621-16530701 0.00017 44_[+1]_28 chrX:1053116-1053196 0.00017 26_[+1]_46 chrV:10464325-10464405 0.00017 20_[+1]_52 chrI:5962161-5962241 0.00017 29_[+1]_43 chrII:13839585-13839665 0.00022 35_[+1]_37 chrII:8215410-8215490 0.00022 65_[+1]_7 chrI:6250107-6250187 0.00022 26_[+1]_46 chrV:8171846-8171926 0.00022 55_[+1]_17 chrII:4906017-4906097 0.00022 41_[+1]_31 chrV:3821059-3821139 0.00022 62_[+1]_10 chrV:9283586-9283666 0.00025 50_[+1]_22 chrV:5039737-5039817 0.00025 46_[+1]_26 chrV:7554094-7554174 0.00025 65_[+1]_7 chrII:12346426-12346506 0.00025 38_[+1]_34 chrI:4943019-4943099 0.00025 25_[+1]_47 chrV:4868866-4868946 0.00025 21_[+1]_51 chrIV:2284811-2284891 0.00028 18_[+1]_54 chrIII:9082578-9082658 0.00028 9_[+1]_63 chrII:14646525-14646605 0.00028 64_[+1]_8 chrI:5871581-5871661 0.00028 28_[+1]_44 chrIII:5872419-5872499 0.00028 17_[+1]_55 chrIII:8535603-8535683 0.00028 8_[+1]_64 chrV:20555292-20555372 0.00028 15_[+1]_57 chrI:7373233-7373313 0.00032 35_[+1]_37 chrII:11607628-11607708 0.00032 16_[+1]_56 chrX:16448653-16448733 0.00032 55_[+1]_17 chrII:13788979-13789059 0.00032 45_[+1]_27 chrII:7360648-7360728 0.00032 72_[+1] chrX:3255954-3256034 0.00032 40_[+1]_32 chrIV:2778660-2778740 0.00032 11_[+1]_61 chrX:17528260-17528340 0.00032 49_[+1]_23 chrII:11659166-11659246 0.00032 36_[+1]_36 chrI:9848433-9848513 0.00032 30_[+1]_42 chrV:13161190-13161270 0.00032 60_[+1]_12 chrV:5447217-5447297 0.00032 45_[+1]_27 chrII:2439105-2439185 0.00032 68_[+1]_4 chrV:9292090-9292170 0.00032 69_[+1]_3 chrV:5444184-5444264 0.00034 51_[+1]_21 chrX:15556152-15556232 0.00034 1_[+1]_71 chrV:154717-154797 0.00034 45_[+1]_27 chrX:3375430-3375510 0.00034 40_[+1]_32 chrI:4944339-4944419 0.00034 49_[+1]_23 chrX:8729186-8729266 0.00034 27_[+1]_45 chrI:2045074-2045154 0.00038 42_[+1]_30 chrX:7063459-7063539 0.00038 29_[+1]_43 chrX:5193642-5193722 0.00038 51_[+1]_21 chrX:9719236-9719316 0.00038 55_[+1]_17 chrX:2763528-2763608 0.00045 64_[+1]_8 chrX:9654395-9654475 0.00045 69_[+1]_3 chrIII:4647484-4647564 0.00045 60_[+1]_12 chrX:2438599-2438679 0.0005 69_[+1]_3 chrII:160733-160813 0.0005 44_[+1]_28 chrV:11506430-11506510 0.0005 34_[+1]_38 chrIII:10519045-10519125 0.0005 72_[+1] chrI:3644953-3645033 0.0005 25_[+1]_47 chrX:11597017-11597097 0.0005 1_[+1]_71 chrV:6342704-6342784 0.00057 21_[+1]_51 chrV:6721403-6721483 0.00057 58_[+1]_14 chrI:7375079-7375159 0.00057 15_[+1]_57 chrIII:8371769-8371849 0.00057 36_[+1]_36 chrX:3711850-3711930 0.00057 62_[+1]_10 chrX:6221259-6221339 0.00057 37_[+1]_35 chrV:4864493-4864573 0.00057 14_[+1]_58 chrIV:11569941-11570021 0.00057 64_[+1]_8 chrV:5304546-5304626 0.00057 68_[+1]_4 chrIII:3435787-3435867 0.0006 12_[+1]_60 chrX:11459053-11459133 0.0006 36_[+1]_36 chrIV:3853715-3853795 0.0006 50_[+1]_22 chrIII:13187905-13187985 0.00065 25_[+1]_47 chrII:10899152-10899232 0.00065 49_[+1]_23 chrV:8600107-8600187 0.00065 69_[+1]_3 chrX:3937655-3937735 0.00065 10_[+1]_62 chrX:15034924-15035004 0.00078 57_[+1]_15 chrX:2538882-2538962 0.00078 53_[+1]_19 chrV:6753413-6753493 0.00078 66_[+1]_6 chrIII:12058602-12058682 0.00087 12_[+1]_60 chrX:11470418-11470498 0.00087 37_[+1]_35 chrI:4941236-4941316 0.00087 53_[+1]_19 chrIII:1922694-1922774 0.00087 59_[+1]_13 chrIV:10489585-10489665 0.00087 19_[+1]_53 chrI:3472850-3472930 0.00087 3_[+1]_69 chrI:9150395-9150475 0.00095 34_[+1]_38 chrV:13517202-13517282 0.00095 29_[+1]_43 chrIV:6748674-6748754 0.00095 44_[+1]_28 chrII:4658403-4658483 0.00095 57_[+1]_15 chrI:2458767-2458847 0.00095 42_[+1]_30 chrX:9782514-9782594 0.001 28_[+1]_44 chrX:13212693-13212773 0.001 49_[+1]_23 chrX:15039201-15039281 0.0011 21_[+1]_51 chrIV:7767121-7767201 0.0011 58_[+1]_14 chrX:13567645-13567725 0.0011 66_[+1]_6 chrIV:10512973-10513053 0.0011 26_[+1]_46 chrV:8471057-8471137 0.0011 31_[+1]_41 chrV:12636698-12636778 0.0012 71_[+1]_1 chrV:5217626-5217706 0.0012 32_[+1]_40 chrX:7447507-7447587 0.0012 52_[+1]_20 chrX:3502932-3503012 0.0013 27_[+1]_45 chrX:12928906-12928986 0.0013 67_[+1]_5 chrX:16532676-16532756 0.0013 11_[+1]_61 chrV:1307906-1307986 0.0013 47_[+1]_25 chrX:8204667-8204747 0.0013 40_[+1]_32 chrV:18581910-18581990 0.0014 10_[+1]_62 chrII:8784392-8784472 0.0014 21_[+1]_51 chrX:15032922-15033002 0.0014 64_[+1]_8 chrIII:482897-482977 0.0016 54_[+1]_18 chrI:4080505-4080585 0.0016 33_[+1]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MCAKMTGK width=8 seqs=170 chrV:9446150-9446230 ( 30) CCATCTGG 1 chrI:7938459-7938539 ( 20) CCATCTGG 1 chrV:976795-976875 ( 47) CCATCTGG 1 chrIV:9817305-9817385 ( 28) CCATCTGG 1 chrIV:1895152-1895232 ( 14) CCATCTGG 1 chrIV:3168811-3168891 ( 16) CCATCTGG 1 chrV:9271999-9272079 ( 18) CCATCTGG 1 chrV:10065849-10065929 ( 43) CCATCTGG 1 chrIV:1904296-1904376 ( 8) CCATATGG 1 chrI:9426903-9426983 ( 48) CCATATGG 1 chrIV:13009658-13009738 ( 42) CCATATGG 1 chrV:2204245-2204325 ( 56) CCAGCTGG 1 chrX:16995663-16995743 ( 37) CCATATGG 1 chrIII:6740241-6740321 ( 56) CCATATGG 1 chrV:10286009-10286089 ( 13) CCATATGG 1 chrX:5243732-5243812 ( 57) CCATCTGT 1 chrX:17062339-17062419 ( 50) CCATCTGT 1 chrIII:8759853-8759933 ( 31) CCATCTGT 1 chrV:16598643-16598723 ( 59) ACATCTGG 1 chrIII:4519608-4519688 ( 29) CCATCTGT 1 chrX:8118079-8118159 ( 16) ACATCTGG 1 chrIII:5710087-5710167 ( 63) ACATCTGG 1 chrV:5010929-5011009 ( 4) ACATCTGG 1 chrI:434657-434737 ( 35) CCATCTGT 1 chrI:14937466-14937546 ( 35) ACATCTGG 1 chrX:1086560-1086640 ( 13) ACATCTGG 1 chrIII:9972538-9972618 ( 18) ACATCTGG 1 chrX:4464523-4464603 ( 47) ACATCTGG 1 chrII:10680307-10680387 ( 18) ACATCTGG 1 chrII:9987007-9987087 ( 24) CCATCTGT 1 chrI:7945565-7945645 ( 43) CCAGATGG 1 chrX:16958162-16958242 ( 28) ACATCTGG 1 chrIV:15280378-15280458 ( 44) ACATCTGG 1 chrX:14055873-14055953 ( 49) CCAGATGG 1 chrI:9016321-9016401 ( 38) CCATCTGT 1 chrX:9597431-9597511 ( 45) CCATCTGT 1 chrI:3419262-3419342 ( 33) ACATCTGG 1 chrV:12751814-12751894 ( 48) ACATCTGG 1 chrX:5260548-5260628 ( 44) ACATCTGG 1 chrI:6238463-6238543 ( 34) CCATATGT 1 chrI:436996-437076 ( 18) ACATATGG 1 chrV:7556022-7556102 ( 61) CCAGCTGT 1 chrIV:10804123-10804203 ( 4) CCATATGT 1 chrII:2206236-2206316 ( 20) ACATATGG 1 chrI:8687252-8687332 ( 31) ACATATGG 1 chrIV:3844169-3844249 ( 47) CCAGATGT 1 chrI:11203243-11203323 ( 29) ACATCTGT 1 chrII:4507027-4507107 ( 70) CCAGATGT 1 chrV:12636493-12636573 ( 59) CCAGATGT 1 chrI:9172560-9172640 ( 41) CCAGATGT 1 chrI:13528224-13528304 ( 10) ACATCTGT 1 chrII:2687099-2687179 ( 19) ACAGATGG 1 chrV:13832866-13832946 ( 37) ACATCTGT 1 chrX:6436595-6436675 ( 25) CCAGATGT 1 chrX:14401413-14401493 ( 28) ACATCTGT 1 chrIII:5980684-5980764 ( 68) CCAGATGT 1 chrII:8644111-8644191 ( 73) CCAGATGT 1 chrX:11592698-11592778 ( 40) ACATCTGT 1 chrIV:5528469-5528549 ( 34) CCAGATGT 1 chrIII:7879087-7879167 ( 48) CCAGATGT 1 chrX:6407972-6408052 ( 32) CCAGATGT 1 chrV:211564-211644 ( 61) CCAGATGT 1 chrIV:81075-81155 ( 35) ACATCTGT 1 chrX:15224272-15224352 ( 57) CCAGATGT 1 chrX:16530621-16530701 ( 45) CCAGATGT 1 chrX:1053116-1053196 ( 27) ACATCTGT 1 chrV:10464325-10464405 ( 21) CCAGATGT 1 chrI:5962161-5962241 ( 30) ACATCTGT 1 chrII:13839585-13839665 ( 36) ACATATGT 1 chrII:8215410-8215490 ( 66) CCACATGG 1 chrI:6250107-6250187 ( 27) ACAGCTGT 1 chrV:8171846-8171926 ( 56) ACATATGT 1 chrII:4906017-4906097 ( 42) ACATATGT 1 chrV:3821059-3821139 ( 63) ACATATGT 1 chrV:9283586-9283666 ( 51) ACAGATGT 1 chrV:5039737-5039817 ( 47) ACAGATGT 1 chrV:7554094-7554174 ( 66) ACACCTGG 1 chrII:12346426-12346506 ( 39) ACAGATGT 1 chrI:4943019-4943099 ( 26) ACAGATGT 1 chrV:4868866-4868946 ( 22) ACAGATGT 1 chrIV:2284811-2284891 ( 19) CCACATGT 1 chrIII:9082578-9082658 ( 10) CCACATGT 1 chrII:14646525-14646605 ( 65) ACACATGG 1 chrI:5871581-5871661 ( 29) ACACATGG 1 chrIII:5872419-5872499 ( 18) CCACATGT 1 chrIII:8535603-8535683 ( 9) CCACATGT 1 chrV:20555292-20555372 ( 16) CCACATGT 1 chrI:7373233-7373313 ( 36) ACACATGT 1 chrII:11607628-11607708 ( 17) ACACATGT 1 chrX:16448653-16448733 ( 56) ACACATGT 1 chrII:13788979-13789059 ( 46) ACACATGT 1 chrII:7360648-7360728 ( 73) ACACATGT 1 chrX:3255954-3256034 ( 41) GCATCTGG 1 chrIV:2778660-2778740 ( 12) ACACATGT 1 chrX:17528260-17528340 ( 50) ACACATGT 1 chrII:11659166-11659246 ( 37) GCATCTGG 1 chrI:9848433-9848513 ( 31) ACACATGT 1 chrV:13161190-13161270 ( 61) ACACATGT 1 chrV:5447217-5447297 ( 46) ACACATGT 1 chrII:2439105-2439185 ( 69) ACACATGT 1 chrV:9292090-9292170 ( 70) GCATCTGG 1 chrV:5444184-5444264 ( 52) CCATGTGG 1 chrX:15556152-15556232 ( 2) GCAGCTGG 1 chrV:154717-154797 ( 46) GCATATGG 1 chrX:3375430-3375510 ( 41) GCATATGG 1 chrI:4944339-4944419 ( 50) GCATATGG 1 chrX:8729186-8729266 ( 28) GCAGCTGG 1 chrI:2045074-2045154 ( 43) GCAGATGG 1 chrX:7063459-7063539 ( 30) GCATCTGT 1 chrX:5193642-5193722 ( 52) GCATCTGT 1 chrX:9719236-9719316 ( 56) CCATCTGC 1 chrX:2763528-2763608 ( 65) ACATGTGG 1 chrX:9654395-9654475 ( 70) ACATGTGG 1 chrIII:4647484-4647564 ( 61) GCAGCTGT 1 chrX:2438599-2438679 ( 70) ACATCTGC 1 chrII:160733-160813 ( 45) CCAGGTGT 1 chrV:11506430-11506510 ( 35) ACATCTGC 1 chrIII:10519045-10519125 ( 73) CCAGATGC 1 chrI:3644953-3645033 ( 26) GCAGATGT 1 chrX:11597017-11597097 ( 2) ACATCTGC 1 chrV:6342704-6342784 ( 22) ACAGCTGC 1 chrV:6721403-6721483 ( 59) CCACGTGG 1 chrI:7375079-7375159 ( 16) ACATGTGT 1 chrIII:8371769-8371849 ( 37) ACATGTGT 1 chrX:3711850-3711930 ( 63) ACAGCTGC 1 chrX:6221259-6221339 ( 38) GCACATGG 1 chrV:4864493-4864573 ( 15) ACATGTGT 1 chrIV:11569941-11570021 ( 65) ACATATGC 1 chrV:5304546-5304626 ( 69) ACATGTGT 1 chrIII:3435787-3435867 ( 13) ACAGATGC 1 chrX:11459053-11459133 ( 37) ACAGATGC 1 chrIV:3853715-3853795 ( 51) ACAGATGC 1 chrIII:13187905-13187985 ( 26) CCACGTGT 1 chrII:10899152-10899232 ( 50) ACACGTGG 1 chrV:8600107-8600187 ( 70) CCACGTGT 1 chrX:3937655-3937735 ( 11) CCACATGC 1 chrX:15034924-15035004 ( 58) ACATCTGA 1 chrX:2538882-2538962 ( 54) CCAGATGA 1 chrV:6753413-6753493 ( 67) ACACATGC 1 chrIII:12058602-12058682 ( 13) TCATCTGT 1 chrX:11470418-11470498 ( 38) ACATATGA 1 chrI:4941236-4941316 ( 54) ACAGCTGA 1 chrIII:1922694-1922774 ( 60) ACATATGA 1 chrIV:10489585-10489665 ( 20) GCATGTGG 1 chrI:3472850-3472930 ( 4) ACATATGA 1 chrI:9150395-9150475 ( 35) TCATATGT 1 chrV:13517202-13517282 ( 30) TCATATGT 1 chrIV:6748674-6748754 ( 45) ACAGATGA 1 chrII:4658403-4658483 ( 58) ACAGATGA 1 chrI:2458767-2458847 ( 43) ACAGATGA 1 chrX:9782514-9782594 ( 29) GCAGCTGC 1 chrX:13212693-13212773 ( 50) GCATGTGT 1 chrX:15039201-15039281 ( 22) TCACATGG 1 chrIV:7767121-7767201 ( 59) GCAGATGC 1 chrX:13567645-13567725 ( 67) TCACATGG 1 chrIV:10512973-10513053 ( 27) TCACATGG 1 chrV:8471057-8471137 ( 32) GCAGATGC 1 chrV:12636698-12636778 ( 72) TCACATGT 1 chrV:5217626-5217706 ( 33) CCACGTGC 1 chrX:7447507-7447587 ( 53) GCAGCTGA 1 chrX:3502932-3503012 ( 28) TCATGTGG 1 chrX:12928906-12928986 ( 68) TCATGTGG 1 chrX:16532676-16532756 ( 12) TCATGTGG 1 chrV:1307906-1307986 ( 48) TCATGTGG 1 chrX:8204667-8204747 ( 41) ACATGTGA 1 chrV:18581910-18581990 ( 11) TCAGCTGC 1 chrII:8784392-8784472 ( 22) GCACATGA 1 chrX:15032922-15033002 ( 65) GCACATGA 1 chrIII:482897-482977 ( 55) TCATATGA 1 chrI:4080505-4080585 ( 34) TCAGCTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.25365 E= 1.6e-100 59 81 -62 -191 -1405 236 -1405 -1405 175 -1405 -1405 -1405 -1405 4 51 74 79 93 -75 -1405 -1405 -1405 -1405 169 -1405 -1405 233 -1405 -175 -88 88 51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 170 E= 1.6e-100 0.447059 0.341176 0.129412 0.082353 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.282353 0.517647 0.511765 0.370588 0.117647 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.088235 0.105882 0.364706 0.441176 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MCAKMTGK MEME-1 regular expression -------------------------------------------------------------------------------- [AC]CA[TGC][AC]TG[TG] -------------------------------------------------------------------------------- Time 8.32 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGGGRGS MEME-2 width = 8 sites = 17 llr = 158 E-value = 3.5e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::2::4:: pos.-specific C 1:1:1::5 probability G 9a6a9675 matrix T ::::::3: bits 2.4 * * 2.1 ** ** 1.9 ** ** 1.7 ** ** Relative 1.4 ** ** * Entropy 1.2 ** ***** (13.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGGGGGGG consensus A ATC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrV:16598643-16598723 39 2.36e-06 ATAGAGGTGG GGGGGGGG GGTCAAAGTA chrII:1276929-1277009 73 2.36e-06 GGAGCTCCCC GGGGGGGG chrII:2687099-2687179 54 8.23e-06 TAAGCGATCT GGGGGAGG ATGAGAGATA chrV:14909613-14909693 53 8.23e-06 AGAGGGATCG GGGGGAGG AAAATGAAAA chrX:16532676-16532756 21 8.23e-06 CTCATGTGGG GGGGGAGG GAGGGCCGCT chrI:2458767-2458847 6 8.23e-06 ATTCA GGGGGAGG TTGGAGAATA chrIII:5976180-5976260 11 2.26e-05 GAGTTGATGA GGGGGGTC AGTCAGTCAG chrII:5220788-5220868 27 2.26e-05 ACACCTCGAT GGGGGGTC ATAAATTTCC chrII:2439105-2439185 50 2.26e-05 AAGGGGGCGT GGGGGGTC ACCCTTATTC chrX:11753329-11753409 38 2.61e-05 GGATGAGGAT GGAGGGGC ACATTGGATT chrV:4864493-4864573 38 2.61e-05 ATCAGTGTCA GGAGGGGC AGAAAAAGTA chrV:5039737-5039817 18 3.07e-05 GTAGCTGAGC GGCGGGGC TGTAAAATGA chrII:11064321-11064401 6 5.23e-05 GTAGT GGAGGAGC AACAATTTTG chrV:16835127-16835207 34 7.49e-05 AGTGGCAAGC GGGGCGGG AAAGAGAAAT chrX:1086560-1086640 31 7.94e-05 ATGGTATTAT CGGGGGGC ATTTTGGCAA chrIII:3343469-3343549 6 8.31e-05 TTTCC GGCGGGTG TATGTGTGTG chrIII:5710087-5710167 29 9.50e-05 AAATTGTAGC GGAGGATG CTTCCTTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:16598643-16598723 2.4e-06 38_[+2]_34 chrII:1276929-1277009 2.4e-06 72_[+2] chrII:2687099-2687179 8.2e-06 53_[+2]_19 chrV:14909613-14909693 8.2e-06 52_[+2]_20 chrX:16532676-16532756 8.2e-06 20_[+2]_52 chrI:2458767-2458847 8.2e-06 5_[+2]_67 chrIII:5976180-5976260 2.3e-05 10_[+2]_62 chrII:5220788-5220868 2.3e-05 26_[+2]_46 chrII:2439105-2439185 2.3e-05 49_[+2]_23 chrX:11753329-11753409 2.6e-05 37_[+2]_35 chrV:4864493-4864573 2.6e-05 37_[+2]_35 chrV:5039737-5039817 3.1e-05 17_[+2]_55 chrII:11064321-11064401 5.2e-05 5_[+2]_67 chrV:16835127-16835207 7.5e-05 33_[+2]_39 chrX:1086560-1086640 7.9e-05 30_[+2]_42 chrIII:3343469-3343549 8.3e-05 5_[+2]_67 chrIII:5710087-5710167 9.5e-05 28_[+2]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGGGRGS width=8 seqs=17 chrV:16598643-16598723 ( 39) GGGGGGGG 1 chrII:1276929-1277009 ( 73) GGGGGGGG 1 chrII:2687099-2687179 ( 54) GGGGGAGG 1 chrV:14909613-14909693 ( 53) GGGGGAGG 1 chrX:16532676-16532756 ( 21) GGGGGAGG 1 chrI:2458767-2458847 ( 6) GGGGGAGG 1 chrIII:5976180-5976260 ( 11) GGGGGGTC 1 chrII:5220788-5220868 ( 27) GGGGGGTC 1 chrII:2439105-2439185 ( 50) GGGGGGTC 1 chrX:11753329-11753409 ( 38) GGAGGGGC 1 chrV:4864493-4864573 ( 38) GGAGGGGC 1 chrV:5039737-5039817 ( 18) GGCGGGGC 1 chrII:11064321-11064401 ( 6) GGAGGAGC 1 chrV:16835127-16835207 ( 34) GGGGCGGG 1 chrX:1086560-1086640 ( 31) CGGGGGGC 1 chrIII:3343469-3343549 ( 6) GGCGGGTG 1 chrIII:5710087-5710167 ( 29) GGAGGATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.4326 E= 3.5e+002 -1073 -173 225 -1073 -1073 -1073 233 -1073 -33 -73 170 -1073 -1073 -1073 233 -1073 -1073 -173 225 -1073 25 -1073 170 -1073 -1073 -1073 183 -8 -1073 127 142 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 17 E= 3.5e+002 0.000000 0.058824 0.941176 0.000000 0.000000 0.000000 1.000000 0.000000 0.235294 0.117647 0.647059 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.058824 0.941176 0.000000 0.352941 0.000000 0.647059 0.000000 0.000000 0.000000 0.705882 0.294118 0.000000 0.470588 0.529412 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGRGS MEME-2 regular expression -------------------------------------------------------------------------------- GG[GA]GG[GA][GT][GC] -------------------------------------------------------------------------------- Time 11.80 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCCTCCG MEME-3 width = 8 sites = 2 llr = 25 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C aaaa:aa: probability G :::::::a matrix T ::::a::: bits 2.4 **** *** 2.1 **** *** 1.9 **** *** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (18.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCCCTCCG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrII:3265215-3265295 54 3.37e-06 GCAAATGTTT CCCCTCCG TTTTTTTTCA chrIV:2298538-2298618 56 3.37e-06 CACACACCCT CCCCTCCG ACTTATTAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:3265215-3265295 3.4e-06 53_[+3]_19 chrIV:2298538-2298618 3.4e-06 55_[+3]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCCTCCG width=8 seqs=2 chrII:3265215-3265295 ( 54) CCCCTCCG 1 chrIV:2298538-2298618 ( 56) CCCCTCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.1e+004 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 -765 -765 168 -765 235 -765 -765 -765 235 -765 -765 -765 -765 233 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.1e+004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCCTCCG MEME-3 regular expression -------------------------------------------------------------------------------- CCCCTCCG -------------------------------------------------------------------------------- Time 15.24 secs. ******************************************************************************** ******************************************************************************** MOTIF CACCCCCA MEME-4 width = 8 sites = 2 llr = 24 E-value = 1.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :a:::::a pos.-specific C a:aaaaa: probability G :::::::: matrix T :::::::: bits 2.4 * ***** 2.1 * ***** 1.9 * ***** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.7 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CACCCCCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:5580022-5580102 34 4.85e-06 GGTTAGGCTT CACCCCCA GGATTCTTAG chrX:15224272-15224352 14 4.85e-06 GCCCCCGATT CACCCCCA ATCATTATTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:5580022-5580102 4.8e-06 33_[+4]_39 chrX:15224272-15224352 4.8e-06 13_[+4]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACCCCCA width=8 seqs=2 chrX:5580022-5580102 ( 34) CACCCCCA 1 chrX:15224272-15224352 ( 14) CACCCCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.3073 E= 1.4e+004 -765 235 -765 -765 175 -765 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 175 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.4e+004 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCCCA MEME-4 regular expression -------------------------------------------------------------------------------- CACCCCCA -------------------------------------------------------------------------------- Time 18.65 secs. ******************************************************************************** ******************************************************************************** MOTIF CACCACCC MEME-5 width = 8 sites = 3 llr = 37 E-value = 5.4e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::a::: pos.-specific C a:aa:aaa probability G :::::::: matrix T :::::::: bits 2.4 * ** *** 2.1 * ** *** 1.9 * ** *** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.7 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CACCACCC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIII:13187905-13187985 59 4.85e-06 GTTTCTAGGT CACCACCC GTGTACTACA chrII:7360648-7360728 30 4.85e-06 TCTATCCCTT CACCACCC CTTAAATTTT chrII:160733-160813 35 4.85e-06 GGTTGTTTTA CACCACCC ACCCAGGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:13187905-13187985 4.8e-06 58_[+5]_14 chrII:7360648-7360728 4.8e-06 29_[+5]_43 chrII:160733-160813 4.8e-06 34_[+5]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACCACCC width=8 seqs=3 chrIII:13187905-13187985 ( 59) CACCACCC 1 chrII:7360648-7360728 ( 30) CACCACCC 1 chrII:160733-160813 ( 35) CACCACCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.2293 E= 5.4e+003 -823 236 -823 -823 175 -823 -823 -823 -823 236 -823 -823 -823 236 -823 -823 175 -823 -823 -823 -823 236 -823 -823 -823 236 -823 -823 -823 236 -823 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 5.4e+003 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCACCC MEME-5 regular expression -------------------------------------------------------------------------------- CACCACCC -------------------------------------------------------------------------------- Time 22.08 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:9167092-9167172 9.80e-01 80 chrX:13212693-13212773 2.93e-01 80 chrV:5304546-5304626 5.83e-01 80 chrV:10286009-10286089 1.24e-02 12_[+1(2.62e-05)]_60 chrI:8687252-8687332 4.77e-01 80 chrX:11597017-11597097 6.00e-01 80 chrV:8556114-8556194 7.43e-01 80 chrI:5962161-5962241 2.20e-01 80 chrX:845593-845673 8.36e-01 80 chrV:3821059-3821139 5.93e-01 80 chrV:10464325-10464405 2.35e-01 80 chrX:5260548-5260628 7.18e-02 25_[+1(5.99e-05)]_10_[+1(5.99e-05)]_\ 29 chrX:4296061-4296141 6.44e-01 80 chrV:10065849-10065929 1.01e-01 42_[+1(8.30e-06)]_30 chrV:12751814-12751894 7.40e-02 47_[+1(5.99e-05)]_25 chrV:1307906-1307986 4.02e-01 80 chrIV:11569941-11570021 6.82e-01 80 chrI:3419262-3419342 9.70e-02 32_[+1(5.99e-05)]_40 chrX:3709918-3709998 9.94e-01 80 chrIV:3853715-3853795 3.57e-01 80 chrX:3937655-3937735 6.34e-01 80 chrV:4864493-4864573 4.07e-02 37_[+2(2.61e-05)]_35 chrX:16117317-16117397 6.20e-01 80 chrV:4868866-4868946 5.95e-01 80 chrII:4906017-4906097 4.53e-01 80 chrI:3644953-3645033 1.00e-01 80 chrX:9719236-9719316 3.13e-01 80 chrV:9292090-9292170 4.17e-01 80 chrI:2458767-2458847 2.71e-02 5_[+2(8.23e-06)]_67 chrX:1053116-1053196 4.08e-02 80 chrV:20555292-20555372 4.46e-01 80 chrIII:6740241-6740321 5.39e-02 55_[+1(2.62e-05)]_17 chrX:9597431-9597511 2.41e-01 44_[+1(5.99e-05)]_28 chrX:16995663-16995743 8.35e-02 36_[+1(2.62e-05)]_36 chrI:9016321-9016401 6.26e-02 37_[+1(5.99e-05)]_35 chrI:4943019-4943099 6.05e-02 80 chrIV:8136734-8136814 9.83e-01 80 chrX:16532676-16532756 1.38e-03 17_[+2(2.36e-06)]_55 chrV:8600107-8600187 5.79e-01 80 chrII:2439105-2439185 3.83e-03 49_[+2(2.26e-05)]_23 chrX:16530621-16530701 4.21e-01 80 chrII:12346426-12346506 1.35e-01 80 chrV:9271999-9272079 9.52e-03 17_[+1(8.30e-06)]_55 chrV:6753413-6753493 1.43e-01 80 chrX:14055873-14055953 2.71e-01 48_[+1(5.99e-05)]_24 chrI:3472850-3472930 3.17e-01 80 chrV:8471057-8471137 2.69e-03 80 chrV:2204245-2204325 1.28e-01 55_[+1(2.62e-05)]_17 chrIV:10489585-10489665 1.63e-01 80 chrX:15224272-15224352 2.44e-04 13_[+4(4.85e-06)]_59 chrIII:4647484-4647564 8.52e-02 80 chrIV:82482-82562 9.76e-01 80 chrX:5565651-5565731 7.26e-01 80 chrV:8171846-8171926 1.30e-01 80 chrIV:14379367-14379447 7.15e-01 80 chrIV:81075-81155 4.62e-03 80 chrV:7554094-7554174 5.82e-02 80 chrV:211564-211644 2.53e-01 80 chrV:5039737-5039817 2.65e-02 17_[+2(3.07e-05)]_55 chrIV:15280378-15280458 4.68e-02 43_[+1(5.99e-05)]_29 chrV:8683910-8683990 9.80e-01 80 chrX:16958162-16958242 3.87e-02 27_[+1(5.99e-05)]_45 chrI:10077634-10077714 7.98e-01 80 chrII:4658403-4658483 7.80e-01 80 chrIII:6155918-6155998 8.74e-01 80 chrX:12928906-12928986 1.74e-01 80 chrX:6407972-6408052 3.77e-01 80 chrI:7945565-7945645 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chrV:5444184-5444264 9.09e-02 80 chrX:15039201-15039281 3.13e-01 80 chrIII:8296446-8296526 9.96e-01 80 chrV:12636698-12636778 7.59e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n12.farnam.hpc.yale.internal ********************************************************************************