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MEME - Motif discovery tool
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)
For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.
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REFERENCE
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If you use this program in your research, please cite:
Timothy L. Bailey and Charles Elkan,
"Fitting a mixture model by expectation maximization to discover
motifs in biopolymers", Proceedings of the Second International
Conference on Intelligent Systems for Molecular Biology, pp. 28-36,
AAAI Press, Menlo Park, California, 1994.
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TRAINING SET
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PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/ceh-9.fasta
CONTROL SEQUENCES= --none--
ALPHABET= ACGT
Sequence name Weight Length Sequence name Weight Length
------------- ------ ------ ------------- ------ ------
chrI:8263752-8263832 1.0000 80 chrI:11126473-11126553 1.0000 80
chrX:7285093-7285173 1.0000 80 chrV:966302-966382 1.0000 80
chrX:6316102-6316182 1.0000 80 chrII:243596-243676 1.0000 80
chrX:15189415-15189495 1.0000 80 chrV:11959096-11959176 1.0000 80
chrX:10482952-10483032 1.0000 80 chrI:12665000-12665080 1.0000 80
chrIV:13026239-13026319 1.0000 80 chrV:3057682-3057762 1.0000 80
chrIV:14033099-14033179 1.0000 80 chrX:15276846-15276926 1.0000 80
chrIV:11027716-11027796 1.0000 80 chrIV:2053660-2053740 1.0000 80
chrIV:12417964-12418044 1.0000 80 chrI:6435885-6435965 1.0000 80
chrX:1323145-1323225 1.0000 80 chrX:16682055-16682135 1.0000 80
chrX:11605831-11605911 1.0000 80 chrX:14561636-14561716 1.0000 80
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COMMAND LINE SUMMARY
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This information can also be useful in the event you wish to report a
problem with the MEME software.
command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_ceh-9/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/ceh-9.fasta
model: mod= zoops nmotifs= 5 evt= inf
objective function: em= E-value of product of p-values
starts= E-value of product of p-values
strands: +
width: minw= 8 maxw= 8
nsites: minsites= 2 maxsites= 22 wnsites= 0.8
theta: spmap= uni spfuzz= 0.5
em: prior= dirichlet b= 0.01 maxiter= 50
distance= 1e-05
trim: wg= 11 ws= 1 endgaps= yes
data: n= 1760 N= 22
sample: seed= 0 hsfrac= 0
searchsize= 1760 norand= no csites= 1000
Letter frequencies in dataset:
A 0.274 C 0.248 G 0.209 T 0.269
Background letter frequencies (from file dataset with add-one prior applied):
A 0.274 C 0.248 G 0.209 T 0.269
Background model order: 0
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MOTIF CTTTTCSC MEME-1 width = 8 sites = 13 llr = 100 E-value = 3.6e-001
********************************************************************************
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Motif CTTTTCSC MEME-1 Description
--------------------------------------------------------------------------------
Simplified A :3::::::
pos.-specific C 7::2:a59
probability G ::::1:3:
matrix T 37a89:21
bits 2.3
2.0 *
1.8 * *
1.6 * ** *
Relative 1.4 **** *
Entropy 1.1 * **** *
(11.1 bits) 0.9 ****** *
0.7 ********
0.5 ********
0.2 ********
0.0 --------
Multilevel CTTTTCCC
consensus TA G
sequence
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif CTTTTCSC MEME-1 sites sorted by position p-value
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Sequence name Start P-value Site
------------- ----- --------- --------
chrX:10482952-10483032 41 1.98e-05 GGTTGAGTTG CTTTTCCC AATATTTTCC
chrV:11959096-11959176 12 1.98e-05 TCTTTTTCTG CTTTTCCC TCAACACACA
chrII:243596-243676 65 3.65e-05 CAAACTACAA CTTTTCGC CCAGAACA
chrX:6316102-6316182 2 5.67e-05 A CATTTCCC AGTGCACATT
chrI:6435885-6435965 9 7.82e-05 CGTCATCG TTTTTCCC CTTTTTTCTC
chrX:1323145-1323225 8 9.52e-05 TTAATCT CATTTCGC ATGGAGAAGA
chrX:15276846-15276926 42 1.35e-04 GACATTTGCA CTTTtctc tatttctctt
chrIV:14033099-14033179 24 1.53e-04 CTCTCATCAG CTTCTCCC TATCGGTCCC
chrV:966302-966382 53 2.46e-04 CACCTAACAC TATTTCGC CGCCGTCTTC
chrIV:2053660-2053740 58 2.69e-04 GGGCTTCATC TTTTTCTC TCTCACTCAC
chrIV:13026239-13026319 62 3.29e-04 CCGCTTCTGG TTTCTCCC TCCGGATGAA
chrX:7285093-7285173 71 3.29e-04 TTTCGTCGCT CTTTTCCT CT
chrIV:12417964-12418044 18 5.47e-04 ACGCGTTATC CATTGCGC CACGCGGCCA
--------------------------------------------------------------------------------
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Motif CTTTTCSC MEME-1 block diagrams
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SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrX:10482952-10483032 2e-05 40_[+1]_32
chrV:11959096-11959176 2e-05 11_[+1]_61
chrII:243596-243676 3.6e-05 64_[+1]_8
chrX:6316102-6316182 5.7e-05 1_[+1]_71
chrI:6435885-6435965 7.8e-05 8_[+1]_64
chrX:1323145-1323225 9.5e-05 7_[+1]_65
chrX:15276846-15276926 0.00013 41_[+1]_31
chrIV:14033099-14033179 0.00015 23_[+1]_49
chrV:966302-966382 0.00025 52_[+1]_20
chrIV:2053660-2053740 0.00027 57_[+1]_15
chrIV:13026239-13026319 0.00033 61_[+1]_11
chrX:7285093-7285173 0.00033 70_[+1]_2
chrIV:12417964-12418044 0.00055 17_[+1]_55
--------------------------------------------------------------------------------
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Motif CTTTTCSC MEME-1 in BLOCKS format
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BL MOTIF CTTTTCSC width=8 seqs=13
chrX:10482952-10483032 ( 41) CTTTTCCC 1
chrV:11959096-11959176 ( 12) CTTTTCCC 1
chrII:243596-243676 ( 65) CTTTTCGC 1
chrX:6316102-6316182 ( 2) CATTTCCC 1
chrI:6435885-6435965 ( 9) TTTTTCCC 1
chrX:1323145-1323225 ( 8) CATTTCGC 1
chrX:15276846-15276926 ( 42) CTTTTCTC 1
chrIV:14033099-14033179 ( 24) CTTCTCCC 1
chrV:966302-966382 ( 53) TATTTCGC 1
chrIV:2053660-2053740 ( 58) TTTTTCTC 1
chrIV:13026239-13026319 ( 62) TTTCTCCC 1
chrX:7285093-7285173 ( 71) CTTTTCCT 1
chrIV:12417964-12418044 ( 18) CATTGCGC 1
//
--------------------------------------------------------------------------------
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Motif CTTTTCSC MEME-1 position-specific scoring matrix
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log-odds matrix: alength= 4 w= 8 n= 1606 bayes= 7.47122 E= 3.6e-001
-1035 148 -1035 20
17 -1035 -1035 136
-1035 -1035 -1035 190
-1035 -69 -1035 165
-1035 -1035 -144 178
-1035 201 -1035 -1035
-1035 112 56 -80
-1035 189 -1035 -180
--------------------------------------------------------------------------------
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Motif CTTTTCSC MEME-1 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 3.6e-001
0.000000 0.692308 0.000000 0.307692
0.307692 0.000000 0.000000 0.692308
0.000000 0.000000 0.000000 1.000000
0.000000 0.153846 0.000000 0.846154
0.000000 0.000000 0.076923 0.923077
0.000000 1.000000 0.000000 0.000000
0.000000 0.538462 0.307692 0.153846
0.000000 0.923077 0.000000 0.076923
--------------------------------------------------------------------------------
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Motif CTTTTCSC MEME-1 regular expression
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[CT][TA]TTTC[CG]C
--------------------------------------------------------------------------------
Time 6.14 secs.
********************************************************************************
********************************************************************************
MOTIF TCTGCGYC MEME-2 width = 8 sites = 5 llr = 48 E-value = 2.5e+002
********************************************************************************
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Motif TCTGCGYC MEME-2 Description
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Simplified A ::::::::
pos.-specific C :a::a:48
probability G ::2a:a:2
matrix T a:8:::6:
bits 2.3 * *
2.0 * ***
1.8 ** ***
1.6 ** ***
Relative 1.4 ****** *
Entropy 1.1 ****** *
(14.0 bits) 0.9 ********
0.7 ********
0.5 ********
0.2 ********
0.0 --------
Multilevel TCTGCGTC
consensus G CG
sequence
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Motif TCTGCGYC MEME-2 sites sorted by position p-value
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Sequence name Start P-value Site
------------- ----- --------- --------
chrIV:14033099-14033179 7 1.30e-05 TAGTTG TCTGCGTC TCTCATCAGC
chrV:966302-966382 27 1.30e-05 GTATGTAAAG TCTGCGTC TCTATAGCCA
chrV:11959096-11959176 43 2.49e-05 ACATAAACCA TCTGCGCC AAAAACAATT
chrV:3057682-3057762 45 4.59e-05 TACCACCGCC TCTGCGTG GACTGTTGTA
chrI:12665000-12665080 11 5.52e-05 GCGATTCAAA TCGGCGCC AATTTAAAGT
--------------------------------------------------------------------------------
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Motif TCTGCGYC MEME-2 block diagrams
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SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrIV:14033099-14033179 1.3e-05 6_[+2]_66
chrV:966302-966382 1.3e-05 26_[+2]_46
chrV:11959096-11959176 2.5e-05 42_[+2]_30
chrV:3057682-3057762 4.6e-05 44_[+2]_28
chrI:12665000-12665080 5.5e-05 10_[+2]_62
--------------------------------------------------------------------------------
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Motif TCTGCGYC MEME-2 in BLOCKS format
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BL MOTIF TCTGCGYC width=8 seqs=5
chrIV:14033099-14033179 ( 7) TCTGCGTC 1
chrV:966302-966382 ( 27) TCTGCGTC 1
chrV:11959096-11959176 ( 43) TCTGCGCC 1
chrV:3057682-3057762 ( 45) TCTGCGTG 1
chrI:12665000-12665080 ( 11) TCGGCGCC 1
//
--------------------------------------------------------------------------------
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Motif TCTGCGYC MEME-2 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 8 n= 1606 bayes= 8.57509 E= 2.5e+002
-897 -897 -897 189
-897 201 -897 -897
-897 -897 -6 157
-897 -897 225 -897
-897 201 -897 -897
-897 -897 225 -897
-897 69 -897 116
-897 169 -6 -897
--------------------------------------------------------------------------------
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Motif TCTGCGYC MEME-2 position-specific probability matrix
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letter-probability matrix: alength= 4 w= 8 nsites= 5 E= 2.5e+002
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.200000 0.800000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.400000 0.000000 0.600000
0.000000 0.800000 0.200000 0.000000
--------------------------------------------------------------------------------
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Motif TCTGCGYC MEME-2 regular expression
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TC[TG]GCG[TC][CG]
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Time 8.39 secs.
********************************************************************************
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MOTIF RAWGAAGA MEME-3 width = 8 sites = 13 llr = 94 E-value = 2.5e+002
********************************************************************************
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Motif RAWGAAGA MEME-3 Description
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Simplified A 5a5:581a
pos.-specific C 1::::11:
probability G 5::a2:8:
matrix T ::5:22::
bits 2.3 *
2.0 *
1.8 * * *
1.6 * * *
Relative 1.4 * * **
Entropy 1.1 * * **
(10.5 bits) 0.9 *** ***
0.7 **** ***
0.5 ********
0.2 ********
0.0 --------
Multilevel AAAGAAGA
consensus G T G
sequence T
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 sites sorted by position p-value
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Sequence name Start P-value Site
------------- ----- --------- --------
chrX:1323145-1323225 30 1.41e-05 AGAAGAGAAA GAAGAAGA TGCAGAAAAC
chrX:15189415-15189495 56 1.41e-05 ACTGAACGGC GAAGAAGA AACGCGAGAA
chrX:14561636-14561716 30 2.79e-05 AGCACGAAGA GATGAAGA CGTGCACGTA
chrIV:2053660-2053740 6 2.79e-05 GATTT GATGAAGA AGTGTGGGGG
chrX:15276846-15276926 26 4.64e-05 CGGAGAATGC AAAGAAGA CATTTGCACT
chrX:7285093-7285173 2 1.14e-04 C AAAGGAGA CGCAGCTTCA
chrIV:11027716-11027796 17 1.77e-04 agatagGAAT AATGTAGA GTAACGAGAC
chrI:8263752-8263832 25 3.64e-04 ACGTATGGAA AAAGACGA CACATGCATG
chrX:11605831-11605911 2 4.55e-04 T GAAGAAAA TATAAGTTTT
chrIV:14033099-14033179 57 4.55e-04 TGATGGCGGC AATGGTGA CTCTCTCTCT
chrV:966302-966382 70 5.68e-04 CCGCCGTCTT CAAGTAGA GAG
chrI:11126473-11126553 68 6.10e-04 ACATCCGGAA AATGTTGA CGACG
chrX:6316102-6316182 38 7.87e-04 AAATCCACCA GATGGACA CGACGGAAGA
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 block diagrams
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SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrX:1323145-1323225 1.4e-05 29_[+3]_43
chrX:15189415-15189495 1.4e-05 55_[+3]_17
chrX:14561636-14561716 2.8e-05 29_[+3]_43
chrIV:2053660-2053740 2.8e-05 5_[+3]_67
chrX:15276846-15276926 4.6e-05 25_[+3]_47
chrX:7285093-7285173 0.00011 1_[+3]_71
chrIV:11027716-11027796 0.00018 16_[+3]_56
chrI:8263752-8263832 0.00036 24_[+3]_48
chrX:11605831-11605911 0.00046 1_[+3]_71
chrIV:14033099-14033179 0.00046 56_[+3]_16
chrV:966302-966382 0.00057 69_[+3]_3
chrI:11126473-11126553 0.00061 67_[+3]_5
chrX:6316102-6316182 0.00079 37_[+3]_35
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 in BLOCKS format
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BL MOTIF RAWGAAGA width=8 seqs=13
chrX:1323145-1323225 ( 30) GAAGAAGA 1
chrX:15189415-15189495 ( 56) GAAGAAGA 1
chrX:14561636-14561716 ( 30) GATGAAGA 1
chrIV:2053660-2053740 ( 6) GATGAAGA 1
chrX:15276846-15276926 ( 26) AAAGAAGA 1
chrX:7285093-7285173 ( 2) AAAGGAGA 1
chrIV:11027716-11027796 ( 17) AATGTAGA 1
chrI:8263752-8263832 ( 25) AAAGACGA 1
chrX:11605831-11605911 ( 2) GAAGAAAA 1
chrIV:14033099-14033179 ( 57) AATGGTGA 1
chrV:966302-966382 ( 70) CAAGTAGA 1
chrI:11126473-11126553 ( 68) AATGTTGA 1
chrX:6316102-6316182 ( 38) GATGGACA 1
//
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 8 n= 1606 bayes= 7.47122 E= 2.5e+002
75 -169 114 -1035
187 -1035 -1035 -1035
98 -1035 -1035 78
-1035 -1035 226 -1035
98 -1035 14 -22
149 -169 -1035 -80
-183 -169 202 -1035
187 -1035 -1035 -1035
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 2.5e+002
0.461538 0.076923 0.461538 0.000000
1.000000 0.000000 0.000000 0.000000
0.538462 0.000000 0.000000 0.461538
0.000000 0.000000 1.000000 0.000000
0.538462 0.000000 0.230769 0.230769
0.769231 0.076923 0.000000 0.153846
0.076923 0.076923 0.846154 0.000000
1.000000 0.000000 0.000000 0.000000
--------------------------------------------------------------------------------
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Motif RAWGAAGA MEME-3 regular expression
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[AG]A[AT]G[AGT]AGA
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Time 8.82 secs.
********************************************************************************
********************************************************************************
MOTIF YGGCGCGC MEME-4 width = 8 sites = 2 llr = 22 E-value = 1.3e+003
********************************************************************************
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Motif YGGCGCGC MEME-4 Description
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Simplified A ::::::::
pos.-specific C 5::a:a:a
probability G :aa:a:a:
matrix T 5:::::::
bits 2.3 ** * *
2.0 *******
1.8 *******
1.6 *******
Relative 1.4 *******
Entropy 1.1 *******
(16.0 bits) 0.9 ********
0.7 ********
0.5 ********
0.2 ********
0.0 --------
Multilevel CGGCGCGC
consensus T
sequence
--------------------------------------------------------------------------------
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Motif YGGCGCGC MEME-4 sites sorted by position p-value
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Sequence name Start P-value Site
------------- ----- --------- --------
chrI:12665000-12665080 41 7.22e-06 GCAAACACGG CGGCGCGC ACTTGCGTAC
chrX:11605831-11605911 46 1.50e-05 AAGAGCCGTT TGGCGCGC TACAAACACA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif YGGCGCGC MEME-4 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrI:12665000-12665080 7.2e-06 40_[+4]_32
chrX:11605831-11605911 1.5e-05 45_[+4]_27
--------------------------------------------------------------------------------
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Motif YGGCGCGC MEME-4 in BLOCKS format
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BL MOTIF YGGCGCGC width=8 seqs=2
chrI:12665000-12665080 ( 41) CGGCGCGC 1
chrX:11605831-11605911 ( 46) TGGCGCGC 1
//
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif YGGCGCGC MEME-4 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 8 n= 1606 bayes= 9.64746 E= 1.3e+003
-765 101 -765 89
-765 -765 225 -765
-765 -765 225 -765
-765 200 -765 -765
-765 -765 225 -765
-765 200 -765 -765
-765 -765 225 -765
-765 200 -765 -765
--------------------------------------------------------------------------------
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Motif YGGCGCGC MEME-4 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.3e+003
0.000000 0.500000 0.000000 0.500000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
--------------------------------------------------------------------------------
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Motif YGGCGCGC MEME-4 regular expression
--------------------------------------------------------------------------------
[CT]GGCGCGC
--------------------------------------------------------------------------------
Time 9.17 secs.
********************************************************************************
********************************************************************************
MOTIF AGAGGGST MEME-5 width = 8 sites = 2 llr = 22 E-value = 3.6e+003
********************************************************************************
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 Description
--------------------------------------------------------------------------------
Simplified A a:a:::::
pos.-specific C ::::::5:
probability G :a:aaa5:
matrix T :::::::a
bits 2.3 * ***
2.0 * ***
1.8 ****** *
1.6 ****** *
Relative 1.4 ****** *
Entropy 1.1 ********
(15.8 bits) 0.9 ********
0.7 ********
0.5 ********
0.2 ********
0.0 --------
Multilevel AGAGGGCT
consensus G
sequence
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name Start P-value Site
------------- ----- --------- --------
chrI:8263752-8263832 1 8.05e-06 . AGAGGGGT CAACAGACGT
chrIV:2053660-2053740 45 1.76e-05 TGCTCCCAGG AGAGGGCT TCATCTTTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrI:8263752-8263832 8.1e-06 [+5]_72
chrIV:2053660-2053740 1.8e-05 44_[+5]_28
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 in BLOCKS format
--------------------------------------------------------------------------------
BL MOTIF AGAGGGST width=8 seqs=2
chrI:8263752-8263832 ( 1) AGAGGGGT 1
chrIV:2053660-2053740 ( 45) AGAGGGCT 1
//
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 8 n= 1606 bayes= 7.8776 E= 3.6e+003
186 -765 -765 -765
-765 -765 225 -765
186 -765 -765 -765
-765 -765 225 -765
-765 -765 225 -765
-765 -765 225 -765
-765 101 125 -765
-765 -765 -765 189
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 3.6e+003
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.500000 0.500000 0.000000
0.000000 0.000000 0.000000 1.000000
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Motif AGAGGGST MEME-5 regular expression
--------------------------------------------------------------------------------
AGAGGG[CG]T
--------------------------------------------------------------------------------
Time 9.54 secs.
********************************************************************************
********************************************************************************
SUMMARY OF MOTIFS
********************************************************************************
--------------------------------------------------------------------------------
Combined block diagrams: non-overlapping sites with p-value < 0.0001
--------------------------------------------------------------------------------
SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM
------------- ---------------- -------------
chrI:8263752-8263832 1.30e-02 [+5(8.05e-06)]_72
chrI:11126473-11126553 4.59e-01 80
chrX:7285093-7285173 7.34e-03 80
chrV:966302-966382 1.30e-03 26_[+2(1.30e-05)]_46
chrX:6316102-6316182 4.11e-02 1_[+1(5.67e-05)]_71
chrII:243596-243676 1.24e-01 64_[+1(3.65e-05)]_8
chrX:15189415-15189495 1.91e-02 55_[+3(1.41e-05)]_17
chrV:11959096-11959176 2.88e-03 11_[+1(1.98e-05)]_23_[+2(2.49e-05)]_\
30
chrX:10482952-10483032 5.40e-02 40_[+1(1.98e-05)]_32
chrI:12665000-12665080 2.10e-03 10_[+2(5.52e-05)]_22_[+4(7.22e-06)]_\
32
chrIV:13026239-13026319 1.78e-01 80
chrV:3057682-3057762 5.81e-02 44_[+2(4.59e-05)]_28
chrIV:14033099-14033179 5.15e-04 6_[+2(1.30e-05)]_66
chrX:15276846-15276926 1.29e-02 25_[+3(4.64e-05)]_47
chrIV:11027716-11027796 1.33e-01 80
chrIV:2053660-2053740 1.12e-04 5_[+3(2.79e-05)]_31_[+5(1.76e-05)]_\
28
chrIV:12417964-12418044 1.15e-01 80
chrI:6435885-6435965 2.39e-01 8_[+1(7.82e-05)]_64
chrX:1323145-1323225 6.10e-03 7_[+1(9.52e-05)]_14_[+3(1.41e-05)]_\
43
chrX:16682055-16682135 2.47e-01 80
chrX:11605831-11605911 1.23e-03 45_[+4(1.50e-05)]_27
chrX:14561636-14561716 5.73e-02 29_[+3(2.79e-05)]_43
--------------------------------------------------------------------------------
********************************************************************************
********************************************************************************
Stopped because requested number of motifs (5) found.
********************************************************************************
CPU: c27n12.farnam.hpc.yale.internal
********************************************************************************