******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/worm/fasta/RankLinear2.0_40/ceh-48.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIV:17119146-17119226 1.0000 80 chrII:3315067-3315147 1.0000 80 chrI:1488242-1488322 1.0000 80 chrIII:2836876-2836956 1.0000 80 chrIII:2837217-2837297 1.0000 80 chrIII:2283605-2283685 1.0000 80 chrIV:983733-983813 1.0000 80 chrIV:1000590-1000670 1.0000 80 chrIV:1435330-1435410 1.0000 80 chrIII:1583661-1583741 1.0000 80 chrIV:2236120-2236200 1.0000 80 chrI:649294-649374 1.0000 80 chrIII:2837468-2837548 1.0000 80 chrIII:11971524-11971604 1.0000 80 chrI:13413094-13413174 1.0000 80 chrII:5820428-5820508 1.0000 80 chrX:17464944-17465024 1.0000 80 chrI:11377410-11377490 1.0000 80 chrX:2841637-2841717 1.0000 80 chrIII:2994141-2994221 1.0000 80 chrIV:1443637-1443717 1.0000 80 chrIV:16643932-16644012 1.0000 80 chrX:11290662-11290742 1.0000 80 chrV:19907539-19907619 1.0000 80 chrIII:1580305-1580385 1.0000 80 chrIII:1892315-1892395 1.0000 80 chrV:19906161-19906241 1.0000 80 chrI:11486635-11486715 1.0000 80 chrV:19904946-19905026 1.0000 80 chrI:1489489-1489569 1.0000 80 chrII:6191504-6191584 1.0000 80 chrII:12805327-12805407 1.0000 80 chrIII:1879061-1879141 1.0000 80 chrIII:11614447-11614527 1.0000 80 chrI:11486072-11486152 1.0000 80 chrIII:11615037-11615117 1.0000 80 chrI:354955-355035 1.0000 80 chrII:14102277-14102357 1.0000 80 chrV:5558135-5558215 1.0000 80 chrIII:1805746-1805826 1.0000 80 chrV:19909569-19909649 1.0000 80 chrIII:1955686-1955766 1.0000 80 chrV:19113790-19113870 1.0000 80 chrIII:12411203-12411283 1.0000 80 chrII:12255698-12255778 1.0000 80 chrV:19112718-19112798 1.0000 80 chrI:96152-96232 1.0000 80 chrI:11487312-11487392 1.0000 80 chrIII:204086-204166 1.0000 80 chrI:3375823-3375903 1.0000 80 chrI:12214357-12214437 1.0000 80 chrIV:11694391-11694471 1.0000 80 chrV:19027523-19027603 1.0000 80 chrII:12301404-12301484 1.0000 80 chrIV:1408320-1408400 1.0000 80 chrV:18984846-18984926 1.0000 80 chrIV:999849-999929 1.0000 80 chrI:11384765-11384845 1.0000 80 chrIII:1058211-1058291 1.0000 80 chrIV:10735088-10735168 1.0000 80 chrIII:2438723-2438803 1.0000 80 chrI:1739937-1740017 1.0000 80 chrI:11533774-11533854 1.0000 80 chrX:2898240-2898320 1.0000 80 chrIII:1876444-1876524 1.0000 80 chrIII:1807441-1807521 1.0000 80 chrV:19635651-19635731 1.0000 80 chrV:19026923-19027003 1.0000 80 chrIII:2014271-2014351 1.0000 80 chrI:11532855-11532935 1.0000 80 chrII:13315797-13315877 1.0000 80 chrII:3063563-3063643 1.0000 80 chrIV:848989-849069 1.0000 80 chrV:19630119-19630199 1.0000 80 chrI:649963-650043 1.0000 80 chrI:13805319-13805399 1.0000 80 chrIII:2995465-2995545 1.0000 80 chrIII:2014072-2014152 1.0000 80 chrV:19902024-19902104 1.0000 80 chrI:3004068-3004148 1.0000 80 chrV:19633134-19633214 1.0000 80 chrIV:1751389-1751469 1.0000 80 chrII:11166531-11166611 1.0000 80 chrII:7755359-7755439 1.0000 80 chrII:13316238-13316318 1.0000 80 chrI:13804196-13804276 1.0000 80 chrIII:2328782-2328862 1.0000 80 chrIII:2098346-2098426 1.0000 80 chrV:19099612-19099692 1.0000 80 chrI:1487516-1487596 1.0000 80 chrIII:1578673-1578753 1.0000 80 chrIII:1834066-1834146 1.0000 80 chrIII:2419689-2419769 1.0000 80 chrIII:2960935-2961015 1.0000 80 chrIII:3170683-3170763 1.0000 80 chrIV:2313894-2313974 1.0000 80 chrIII:2780480-2780560 1.0000 80 chrIV:1740608-1740688 1.0000 80 chrII:13414266-13414346 1.0000 80 chrIII:1618450-1618530 1.0000 80 chrII:2502639-2502719 1.0000 80 chrIV:978357-978437 1.0000 80 chrIII:12978585-12978665 1.0000 80 chrIII:2282408-2282488 1.0000 80 chrI:1643233-1643313 1.0000 80 chrII:4256679-4256759 1.0000 80 chrX:5841978-5842058 1.0000 80 chrV:43230-43310 1.0000 80 chrV:19101757-19101837 1.0000 80 chrX:1339434-1339514 1.0000 80 chrIV:991819-991899 1.0000 80 chrI:1870818-1870898 1.0000 80 chrIV:206872-206952 1.0000 80 chrX:11223595-11223675 1.0000 80 chrI:1987503-1987583 1.0000 80 chrV:20105185-20105265 1.0000 80 chrX:13105511-13105591 1.0000 80 chrIV:13375062-13375142 1.0000 80 chrII:2758654-2758734 1.0000 80 chrI:2365022-2365102 1.0000 80 chrI:697829-697909 1.0000 80 chrIII:10819429-10819509 1.0000 80 chrIII:2112711-2112791 1.0000 80 chrX:5336172-5336252 1.0000 80 chrV:18940974-18941054 1.0000 80 chrI:692456-692536 1.0000 80 chrII:13315998-13316078 1.0000 80 chrX:5508077-5508157 1.0000 80 chrX:15431101-15431181 1.0000 80 chrII:13641474-13641554 1.0000 80 chrI:2937068-2937148 1.0000 80 chrX:16959792-16959872 1.0000 80 chrI:13724761-13724841 1.0000 80 chrV:19121253-19121333 1.0000 80 chrII:3064145-3064225 1.0000 80 chrIV:1004878-1004958 1.0000 80 chrV:18993672-18993752 1.0000 80 chrV:20104576-20104656 1.0000 80 chrIII:1807677-1807757 1.0000 80 chrII:724179-724259 1.0000 80 chrIV:15528394-15528474 1.0000 80 chrI:1816567-1816647 1.0000 80 chrI:627737-627817 1.0000 80 chrI:1052009-1052089 1.0000 80 chrI:2334883-2334963 1.0000 80 chrII:13417614-13417694 1.0000 80 chrIII:9950256-9950336 1.0000 80 chrI:651585-651665 1.0000 80 chrIII:2013370-2013450 1.0000 80 chrII:614888-614968 1.0000 80 chrII:3374015-3374095 1.0000 80 chrIV:17329045-17329125 1.0000 80 chrX:11658231-11658311 1.0000 80 chrIII:1965335-1965415 1.0000 80 chrI:11388935-11389015 1.0000 80 chrIII:9272256-9272336 1.0000 80 chrIV:2391993-2392073 1.0000 80 chrIV:1006796-1006876 1.0000 80 chrII:1341769-1341849 1.0000 80 chrV:20464989-20465069 1.0000 80 chrI:11385510-11385590 1.0000 80 chrX:11511354-11511434 1.0000 80 chrII:3291440-3291520 1.0000 80 chrI:12759817-12759897 1.0000 80 chrIII:1085162-1085242 1.0000 80 chrI:2338124-2338204 1.0000 80 chrIV:14034728-14034808 1.0000 80 chrIV:3738711-3738791 1.0000 80 chrIV:11662583-11662663 1.0000 80 chrIII:11129539-11129619 1.0000 80 chrV:19010580-19010660 1.0000 80 chrIII:10120243-10120323 1.0000 80 chrX:2261151-2261231 1.0000 80 chrII:7061224-7061304 1.0000 80 chrV:687687-687767 1.0000 80 chrII:2192458-2192538 1.0000 80 chrV:20457347-20457427 1.0000 80 chrI:13576496-13576576 1.0000 80 chrI:13806477-13806557 1.0000 80 chrI:1815559-1815639 1.0000 80 chrIII:12395254-12395334 1.0000 80 chrIII:12951712-12951792 1.0000 80 chrIII:4301452-4301532 1.0000 80 chrI:1435250-1435330 1.0000 80 chrIII:2961141-2961221 1.0000 80 chrV:19100321-19100401 1.0000 80 chrIII:11710001-11710081 1.0000 80 chrIV:8986901-8986981 1.0000 80 chrIII:11280079-11280159 1.0000 80 chrIII:2962002-2962082 1.0000 80 chrI:353358-353438 1.0000 80 chrI:1816800-1816880 1.0000 80 chrIII:10861462-10861542 1.0000 80 chrI:11533054-11533134 1.0000 80 chrI:10479100-10479180 1.0000 80 chrIII:1584462-1584542 1.0000 80 chrIII:3242532-3242612 1.0000 80 chrI:11526066-11526146 1.0000 80 chrI:113053-113133 1.0000 80 chrV:4812673-4812753 1.0000 80 chrI:14506844-14506924 1.0000 80 chrIV:15453556-15453636 1.0000 80 chrX:7222503-7222583 1.0000 80 chrII:12176625-12176705 1.0000 80 chrI:1448996-1449076 1.0000 80 chrX:3802890-3802970 1.0000 80 chrI:625261-625341 1.0000 80 chrI:626041-626121 1.0000 80 chrII:3070295-3070375 1.0000 80 chrIII:9538941-9539021 1.0000 80 chrIII:5879454-5879534 1.0000 80 chrV:19087603-19087683 1.0000 80 chrI:11488169-11488249 1.0000 80 chrI:1392940-1393020 1.0000 80 chrIV:1437763-1437843 1.0000 80 chrIV:1740819-1740899 1.0000 80 chrIV:977963-978043 1.0000 80 chrIV:16049028-16049108 1.0000 80 chrIII:11733108-11733188 1.0000 80 chrI:4996084-4996164 1.0000 80 chrII:1500873-1500953 1.0000 80 chrIV:7017300-7017380 1.0000 80 chrI:647560-647640 1.0000 80 chrV:13819827-13819907 1.0000 80 chrX:11974821-11974901 1.0000 80 chrX:183624-183704 1.0000 80 chrII:2901359-2901439 1.0000 80 chrV:7221237-7221317 1.0000 80 chrIII:9144074-9144154 1.0000 80 chrV:19073394-19073474 1.0000 80 chrII:12394250-12394330 1.0000 80 chrI:13793794-13793874 1.0000 80 chrI:2380734-2380814 1.0000 80 chrI:14699154-14699234 1.0000 80 chrIV:6958953-6959033 1.0000 80 chrIII:2112914-2112994 1.0000 80 chrV:17926337-17926417 1.0000 80 chrV:31461-31541 1.0000 80 chrII:12036662-12036742 1.0000 80 chrI:11592757-11592837 1.0000 80 chrX:4576413-4576493 1.0000 80 chrX:17222284-17222364 1.0000 80 chrII:7885007-7885087 1.0000 80 chrX:5121950-5122030 1.0000 80 chrI:627938-628018 1.0000 80 chrIV:1727709-1727789 1.0000 80 chrIII:2478794-2478874 1.0000 80 chrIII:6973893-6973973 1.0000 80 chrX:14513612-14513692 1.0000 80 chrIII:5906201-5906281 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/worm/inference_raw/MEME/RankLinear2.0_40_ceh-48/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/worm/fasta/RankLinear2.0_40/ceh-48.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.334 C 0.169 G 0.163 T 0.334 Background letter frequencies (from file dataset with add-one prior applied): A 0.334 C 0.169 G 0.163 T 0.334 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ATCGATWT MEME-1 width = 8 sites = 235 llr = 1820 E-value = 1.0e-300 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 Description -------------------------------------------------------------------------------- Simplified A a::1a:43 pos.-specific C ::9::::: probability G :::9:::: matrix T :a1::a66 bits 2.6 2.4 2.1 ** 1.8 ** Relative 1.6 ****** Entropy 1.3 ****** (11.2 bits) 1.0 ****** 0.8 ****** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATCGATTT consensus AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:1727709-1727789 26 3.82e-05 CACTCAAAAT ATCGATTT TTACTCAAAT chrI:627938-628018 39 3.82e-05 ATCAATAATT ATCGATTT TTGTGATTTT chrX:17222284-17222364 57 3.82e-05 CCGTTCTCCT ATCGATTT TTGTCCCTGC chrV:17926337-17926417 27 3.82e-05 TTTTAAAAAA ATCGATTT TTACCCCAAA chrIII:2112914-2112994 50 3.82e-05 tttggaaatt atcgattt ttcggaaatt chrI:14699154-14699234 6 3.82e-05 ACAAT ATCGATTT TTTATTATCG chrI:2380734-2380814 44 3.82e-05 AATAAAAATT ATCGATTT TTGATAGAAA chrI:13793794-13793874 55 3.82e-05 GCCGGAAATT ATCGATTT TTCCATCAAA chrII:12394250-12394330 49 3.82e-05 GTCTAATATT ATCGATTT TTCAAAAATC chrI:647560-647640 64 3.82e-05 CCTCGATCTT ATCGATTT TTTAAAAGA chrIV:7017300-7017380 18 3.82e-05 GCACACGCTT ATCGATTT CTATTTCGAG chrII:1500873-1500953 35 3.82e-05 CGCATAAATT ATCGATTT TCCAGTGTTG chrIII:11733108-11733188 34 3.82e-05 TTTTCGGAAT ATCGATTT TTCAGAAATT chrIV:1437763-1437843 24 3.82e-05 cgggaatttt atcgattt ttatagaatt chrI:1392940-1393020 42 3.82e-05 GGTGGGGAGA ATCGATTT TCACTTCAAC chrI:11488169-11488249 28 3.82e-05 TTGCTGTATT ATCGATTT TTCGCCGGTC chrV:19087603-19087683 57 3.82e-05 TAGCGCACTT ATCGATTT TTTCTCCCGC chrI:625261-625341 7 3.82e-05 ATAATC ATCGATTT TTTTGTGAAT chrX:7222503-7222583 37 3.82e-05 GCGTGCTCGC ATCGATTT TCAATGTACG chrIV:15453556-15453636 11 3.82e-05 TGGCAATTTT ATCGATTT TTTTCCGAAA chrI:11526066-11526146 24 3.82e-05 CGTCAGAGTT ATCGATTT TCTGATAAAA chrIII:3242532-3242612 9 3.82e-05 CGGAATTT ATCGATTT TTTGAAAATC chrIII:11280079-11280159 41 3.82e-05 AATTGGATTC ATCGATTT TTATTTGCGG chrIII:2961141-2961221 28 3.82e-05 ctggtgaatt atcgattt ttttcgattt chrI:1435250-1435330 41 3.82e-05 TTGCCTAGTT ATCGATTT TCTGAAGGGG chrI:13806477-13806557 20 3.82e-05 ATAAATTTTT ATCGATTT TCCCGCAAAA chrII:2192458-2192538 20 3.82e-05 CACGGAAATT ATCGATTT TTCGGTGATT chrV:19010580-19010660 56 3.82e-05 CCCCGAAAAT ATCGATTT TTCAGCTTCT chrIV:14034728-14034808 40 3.82e-05 ATTCAGAAAT ATCGATTT TCCAAGCGGC chrI:2338124-2338204 42 3.82e-05 TCTGAAAATT ATCGATTT TTTTCCAAAA chrIII:1085162-1085242 67 3.82e-05 GGTTAAAAAT ATCGATTT TACCCC chrI:12759817-12759897 59 3.82e-05 TGGTTGAATT ATCGATTT TATTCAAAAA chrI:11385510-11385590 6 3.82e-05 AAATT ATCGATTT TTTGATGAAG chrII:1341769-1341849 61 3.82e-05 TCCCCTTTTT ATCGATTT CTTTTTCCCC chrIV:1006796-1006876 17 3.82e-05 CCAGAAAATT ATCGATTT TTCCAGAAAA chrIV:2391993-2392073 15 3.82e-05 TTCAAAAATT ATCGATTT TTTCAGGACT chrI:11388935-11389015 46 3.82e-05 CCGGTAAATT ATCGATTT TCCCAGAAAT chrIII:1965335-1965415 57 3.82e-05 tccggaaatt atcgattt ttccggaaat chrI:651585-651665 31 3.82e-05 CCCGATAATT ATCGATTT TTCCGATAAT chrII:13417614-13417694 22 3.82e-05 atcggcaatt atcgattt ttttttgaaa chrI:2334883-2334963 42 3.82e-05 TTTGTAAGTT ATCGATTT TTGAAATTAT chrI:1052009-1052089 24 3.82e-05 CCCCTGGAAT ATCGATTT TATTGATTTT chrI:627737-627817 11 3.82e-05 ATCAATAATT ATCGATTT TTTGTGGATT chrIV:15528394-15528474 52 3.82e-05 CCTGGAAAAT ATCGATTT TTTCTTAAAA chrV:18993672-18993752 38 3.82e-05 ctggaacttt atcgattt ttctctcatt chrIV:1004878-1004958 44 3.82e-05 CCTGGAAAAT ATCGATTT TTCGATTTTC chrX:5508077-5508157 26 3.82e-05 CCGGCGACAT ATCGATTT TTGTGCCTCG chrI:692456-692536 63 3.82e-05 ATCAGAAATT ATCGATTT TTCTGTGAAA chrIII:2112711-2112791 29 3.82e-05 TGAAGGAATT ATCGATTT TTTTAAAATG chrI:697829-697909 31 3.82e-05 TCGGGAAAAT ATCGATTT TTTGGAGAAA chrX:13105511-13105591 38 3.82e-05 TGCCCTAATT ATCGATTT TCATTGCAGG chrV:20105185-20105265 28 3.82e-05 TCAAAATTTT ATCGATTT TCTAATAATC chrIV:206872-206952 46 3.82e-05 CCGCACAAAT ATCGATTT TTCCTCAATT chrIV:991819-991899 23 3.82e-05 CCAAAAAATT ATCGATTT TTACAGAAAA chrX:1339434-1339514 50 3.82e-05 GACACCAATT ATCGATTT TATTGCAATG chrV:43230-43310 26 3.82e-05 CACTTGCATT ATCGATTT TTTTTACTTT chrX:5841978-5842058 37 3.82e-05 GGCAGTAATT ATCGATTT TCCCCCGCAC chrIII:2282408-2282488 31 3.82e-05 tcgggaaatt atcgattt tttcgcgaaa chrII:13414266-13414346 38 3.82e-05 atcggcaatt atcgattt tttggaaaat chrIII:2780480-2780560 35 3.82e-05 GCACCACCCT ATCGATTT TCGTTCCGCC chrIV:2313894-2313974 4 3.82e-05 ATT ATCGATTT TTCGGGTAGA chrIII:3170683-3170763 19 3.82e-05 CTGAGAATTT ATCGATTT TTCTTAGAAA chrIII:2960935-2961015 31 3.82e-05 ctggtgaatt atcgattt ttttcgattt chrIII:1578673-1578753 40 3.82e-05 CGGTTAAAGT ATCGATTT TCACAAATTC chrI:1487516-1487596 43 3.82e-05 CGATAAAGTT ATCGATTT TCATTCGACA chrIII:2098346-2098426 63 3.82e-05 CAAAAAAATT ATCGATTT TGAAGGAAAT chrIII:2328782-2328862 50 3.82e-05 AGCGCGACTT ATCGATTT TTCGaaaaat chrII:7755359-7755439 29 3.82e-05 GCGCACGAAT ATCGATTT CTCTTGAAGA chrV:19633134-19633214 12 3.82e-05 TTGGAGAATT ATCGATTT TTTCGGTAAA chrIII:2014072-2014152 51 3.82e-05 ccttaaaatt atcgattt tccgtaaaag chrIII:2995465-2995545 53 3.82e-05 TCGAAAAATT ATCGATTT TTGCAAAAAG chrI:13805319-13805399 43 3.82e-05 TGTTACAATT ATCGATTT TTCAAACGTT chrI:649963-650043 44 3.82e-05 TCCGATAATT ATCGATTT TCCGGTAATT chrV:19630119-19630199 51 3.82e-05 TGGAAAATGT ATCGATTT TTAGGAGTTT chrIV:848989-849069 29 3.82e-05 cttggaaatt atcgattt ttctgcaaaa chrII:3063563-3063643 42 3.82e-05 TCGATAATTT ATCGATTT TTGACATTTT chrIII:2014271-2014351 23 3.82e-05 ccttaaaatt atcgattt tccgtaaaag chrI:11384765-11384845 71 3.82e-05 CGATGAAATT ATCGATTT TT chrV:18984846-18984926 41 3.82e-05 ctaaaaattt atcgattt ttctggaaat chrIV:1408320-1408400 27 3.82e-05 ctgaaatttc atcgattt ttcggaattt chrIV:11694391-11694471 40 3.82e-05 GTTCTTTGTT ATCGATTT CTCGTTGTGT chrI:12214357-12214437 24 3.82e-05 GTTAAAAAAT ATCGATTT TCGCGAAAAT chrI:3375823-3375903 38 3.82e-05 TTCTCAAATT ATCGATTT TTAAAGCTAG chrIII:204086-204166 21 3.82e-05 GTACGAAATT ATCGATTT TTTCTGTCGA chrI:11487312-11487392 50 3.82e-05 TCAATAAATT ATCGATTT TTCAAGAAAT chrV:19112718-19112798 42 3.82e-05 ctagaaattt atcgattt ttctggaatt chrII:12255698-12255778 33 3.82e-05 ACAATAAATT ATCGATTT TTCCAACAAA chrIII:12411203-12411283 22 3.82e-05 TGAAGAAATT ATCGATTT TTGAAGGAAA chrV:19113790-19113870 38 3.82e-05 ctggaatttt atcgattt ttctgaaatt chrIII:1955686-1955766 38 3.82e-05 TTTGAAAATT ATCGATTT TTCCAGAAAT chrV:19909569-19909649 2 3.82e-05 T ATCGATTT TTATGGAAAT chrI:354955-355035 35 3.82e-05 tctggaattt atcgattt ttctggaata chrI:11486072-11486152 59 3.82e-05 ttatgaaatt atcgattt ttccggaaat chrI:1489489-1489569 50 3.82e-05 GGCAAAGACT ATCGATTT TCTCTCTTTT chrIII:1580305-1580385 63 3.82e-05 CACGTGGATT ATCGATTT TCTGAAAAAT chrX:11290662-11290742 56 3.82e-05 CTCGTCTCGT ATCGATTT TTGGTGTTAT chrIV:16643932-16644012 45 3.82e-05 tccaggaatt atcgattt tttcgaaaat chrIV:1443637-1443717 39 3.82e-05 ttgaaacttt atcgattt ttctggaatt chrIII:2994141-2994221 39 3.82e-05 TTCATTAATT ATCGATTT TCTGTAATAA chrX:17464944-17465024 48 3.82e-05 GTTGCCTTAT ATCGATTT TAGAGCTCGG chrI:649294-649374 33 3.82e-05 tctcaaaagt atcgattt ttgcaattta chrIV:2236120-2236200 59 3.82e-05 ATCAATGATT ATCGATTT TTTGTGAAAT chrIII:1583661-1583741 72 3.82e-05 GCGCGAATCT ATCGATTT T chrIV:983733-983813 44 3.82e-05 TGGCGGAAAT ATCGATTT TTTCGAAATT chrI:11592757-11592837 70 7.65e-05 CGCGAGCAAG ATCGATAT GAG chrIV:6958953-6959033 24 7.65e-05 AAACACAAAA ATCGATAT AGGAAAGGCG chrV:19073394-19073474 67 7.65e-05 TTGTTGAAAA ATCGATAT TTTTGT chrI:113053-113133 4 7.65e-05 AAA ATCGATAT ATTAGGCCAA chrX:11511354-11511434 39 7.65e-05 AAGGACAAAA ATCGATAT GCACAGAGGG chrIII:9272256-9272336 37 7.65e-05 CCGCAGAGAA ATCGATAT GACGCTGTGT chrII:614888-614968 35 7.65e-05 AAACGAAAAA ATCGATAT TTTTCCGGGA chrIII:1807677-1807757 26 7.65e-05 ttatcggaaa atcgatat cttatcggaa chrII:3064145-3064225 22 7.65e-05 AATTGAAGAA ATCGATAT TTTTCAAAAA chrII:13315998-13316078 48 7.65e-05 ATTTGAAAAA ATCGATAT GTCCTAAAAT chrIII:1834066-1834146 59 7.65e-05 caaaaaaaaa atcgatat tttttttgaa chrV:19099612-19099692 73 7.65e-05 TTTCCAAAAA ATCGATAT chrII:13316238-13316318 59 7.65e-05 AAATCGATTA ATCGATAT ATTTGGAAAA chrI:3004068-3004148 45 7.65e-05 GCACACAAAA ATCGATAT CAAGCGCAGT chrIII:1807441-1807521 36 7.65e-05 ttatcggaaa atcgatat tttatcggaa chrIV:1000590-1000670 7 7.65e-05 AGAAAA ATCGATAT ATTTTCCGGA chrII:14102277-14102357 54 1.15e-04 CTCCACACAA ATCGATTA TATTTTTGTG chrIII:5906201-5906281 23 1.53e-04 ATGAACACTG ATCGATAA ATTGGACAGC chrIII:2478794-2478874 21 1.53e-04 CCACTGAAaa atcgataa aaaatcaata chrII:12036662-12036742 8 1.53e-04 ACCAAAA ATCGATAA AAATCAATAA chrV:7221237-7221317 63 1.53e-04 GCGTGCGTAA ATCGATAA ATTTGCTTTG chrII:2901359-2901439 37 1.53e-04 TCAATTAGAA ATCGATAA AATATCACTT chrX:183624-183704 12 1.53e-04 ttccagaaaa atcgataa atttccagaa chrIV:16049028-16049108 51 1.53e-04 TTTAAGAGAG ATCGATAA GTTGCTGCAC chrIV:1740819-1740899 47 1.53e-04 tcccagaaaa atcgataa attcccagaa chrI:1448996-1449076 52 1.53e-04 TTCAGCAAAA ATCGATAA TTTTCATCAA chrI:11533054-11533134 37 1.53e-04 TTTCACAAAA ATCGATAA TATTGATGAA chrIII:10861462-10861542 38 1.53e-04 TTCCTGAAAA ATCGATAA TTCGAAACAA chrI:1816800-1816880 27 1.53e-04 TTCCTAGAAA ATCGATAA ATTCTCAGAA chrI:353358-353438 51 1.53e-04 ttccggaaaa atcgataa ttaccgGGAA chrIII:2962002-2962082 51 1.53e-04 TTCGAAAAAA ATCGATAA TTTCTCGAAA chrIII:11710001-11710081 26 1.53e-04 ATGCAAGAAA ATCGATAA TTTTACCCTC chrIII:4301452-4301532 34 1.53e-04 CGGGAAAAGA ATCGATAA AACTATGCTT chrV:687687-687767 18 1.53e-04 CCCCAAAAAA ATCGATAA AAATGAGAAG chrIII:10120243-10120323 39 1.53e-04 GGCAGAGAAA ATCGATAA TGAACACTCA chrIII:11129539-11129619 54 1.53e-04 CATGAAGAAA ATCGATAA GTACGTAGAT chrII:724179-724259 27 1.53e-04 TTATTGAGAA ATCGATAA TTTTAATTAA chrI:2937068-2937148 49 1.53e-04 CAATTAAAAA ATCGATAA TTTCAACTAA chrX:15431101-15431181 46 1.53e-04 GCCTGCAGGA ATCGATAA TGTGCGAAGG chrIII:10819429-10819509 67 1.53e-04 TTCAATATCG ATCGATAA TAATCC chrI:1987503-1987583 23 1.53e-04 TTCGAAAAAA ATCGATAA TTTTCAGTAT chrV:19101757-19101837 30 1.53e-04 ttttcaaaaa atcgataa atttccagaa chrI:1643233-1643313 17 1.53e-04 TTTCGGAAAA ATCGATAA TTTTCGATTT chrIII:1618450-1618530 58 1.53e-04 GGCAGGGAAA ATCGATAA TTGCATCATT chrIV:1740608-1740688 58 1.53e-04 TCTCAAAAAA ATCGATAA ACTCTCAGAA chrII:13315797-13315877 29 1.53e-04 TTTTGGAAAA ATCGATAA ATTTTGGAAA chrV:19026923-19027003 28 1.53e-04 tttcagaaaa atcgataa attttcagaa chrIII:1876444-1876524 21 1.53e-04 TTCCCGGAAA ATCGATAA TTTTAGAAAA chrI:11533774-11533854 41 1.53e-04 TTCTCGAAAA ATCGATAA TTTCCAAAAA chrIII:1058211-1058291 63 1.53e-04 TCTATAAAAA ATCGATAA TCCACGTGGA chrIV:999849-999929 7 1.53e-04 CTGAAA ATCGATAA TTTTCAAAAA chrII:12301404-12301484 36 1.53e-04 AAATCGAAAA ATCGATAA TTTTTATAAA chrV:19027523-19027603 33 1.53e-04 atcctgaaaa atcgataa attccagaaa chrIII:1805746-1805826 58 1.53e-04 ttaccggaaa atcgataa attaccggaa chrIII:11615037-11615117 4 1.53e-04 AAA ATCGATAA TTTTCCCAAA chrIII:11614447-11614527 8 1.53e-04 AATAAAA ATCGATAA TATTTCCGAA chrIII:1879061-1879141 22 1.53e-04 ttcttgaaaa atcgataa ttttctgaaa chrII:12805327-12805407 44 1.53e-04 GGGGGGAAAA ATCGATAA ATGTCGGTCA chrI:11486635-11486715 27 1.53e-04 TTCCAGAAAA ATCGATAA TTTCCAGAAA chrIII:1892315-1892395 33 1.53e-04 TGCTCGGAAA ATCGATAA CTCGTCGGAA chrV:19907539-19907619 30 1.53e-04 tcccgaaaaa atcgataa atttccaaaa chrI:11377410-11377490 14 1.53e-04 TCTGGAAAAA ATCGATAA AATTCCAGAA chrIII:11971524-11971604 15 1.53e-04 aaatagaaaa atCGATAA ATAACAGAGT chrIII:2837468-2837548 44 1.53e-04 cttgaaaaaa atcgataa tttccggaaA chrIV:1435330-1435410 45 1.53e-04 tttcagaaaa atcgataa tttcctgaaa chrIII:2283605-2283685 35 1.53e-04 TTGCAAGAAA ATCGATAA TTTCGCGAAA chrIII:2837217-2837297 9 1.53e-04 ctggaaaa atcgataa tttcagaaaa chrIII:2836876-2836956 28 1.53e-04 ttccggaaaa atcgataa tttccggaaa chrIV:17119146-17119226 35 1.53e-04 GCACGCAAAA ATCGATAA GCTTTCGGCG chrII:7885007-7885087 71 1.72e-04 CCGTCTTCTC ATCGATTC TC chrIV:13375062-13375142 61 1.72e-04 GACGTGGTTA ATCGATTC TGCTGTCCCC chrIII:5879454-5879534 16 1.92e-04 TCCGTTGAAA ATCGATAC GCGCTCTGTT chrV:20104576-20104656 42 1.92e-04 TAAAACAAAA ATCGATAC AAATTCTGGT chrII:5820428-5820508 72 2.10e-04 GAGACGGAAA ATCGATGT A chrX:5121950-5122030 43 3.64e-04 GCTCGCATTT ATTGATTT CTCCCCCcac chrV:13819827-13819907 43 3.64e-04 CCTGTGTATT ATTGATTT TTCCAAACCT chrI:4996084-4996164 20 3.64e-04 CTTCTCTTTT ATTGATTT GTCGTGCTCT chrII:3070295-3070375 44 3.64e-04 TGGGTTATTT ATTGATTT TTTGAGCATT chrI:626041-626121 29 3.64e-04 AACGACAATT ATTGATTT TTTCCGAAAA chrIII:1584462-1584542 67 3.64e-04 TTCGCTGATT ATTGATTT TTGGTA chrIV:8986901-8986981 49 3.64e-04 ATGCAAATTT ATTGATTT TTGTGGCCCG chrII:3291440-3291520 16 3.64e-04 TCTTGCTTTT ATTGATTT TTTGTTAAAC chrIV:17329045-17329125 68 3.64e-04 CGACGCGTTT ATTGATTT CCGTA chrV:19121253-19121333 29 3.64e-04 TTGGGAATTT ATTGATTT TTTTGGGAAT chrI:13724761-13724841 73 3.64e-04 CTGGAAATTT ATTGATTT chrII:13641474-13641554 36 3.64e-04 CCGCATTTTC ATTGATTT TCCGTCCAAT chrV:18940974-18941054 35 3.64e-04 AAAAATGATT ATTGATTT TTGAAGGGAA chrI:2365022-2365102 46 3.64e-04 CTAGAACATT ATTGATTT TTCTAGGACT chrIII:12978585-12978665 33 3.64e-04 GGCAAAAATT ATTGATTT TTCTTTAGAG chrIII:2419689-2419769 71 3.64e-04 tattgatttt attgattt ta chrV:19902024-19902104 30 3.64e-04 ctggaaattt attgattt tttcggaaat chrV:19635651-19635731 36 3.64e-04 ctggaaattt attgattt ttctggaaac chrI:96152-96232 55 3.64e-04 ATCAATAATT ATTGATTT TTTTTCTAAA chrV:5558135-5558215 65 3.64e-04 TGCTTAACTT ATTGATTT TCATGAGA chrV:19904946-19905026 35 3.64e-04 ctggaaattt attgattt tctggaaatt chrV:19906161-19906241 51 3.64e-04 tacaaaattt attgattt ttctgaaatt chrI:1488242-1488322 49 3.64e-04 CGATTAAATT ATTGATTT TCCGCCGGCA chrIII:9950256-9950336 60 3.83e-04 TGACCAGAAA ATCGATTG TGTTGTGTCC chrIII:9144074-9144154 49 5.56e-04 CTAACTCCCG ATCAATAT CCTTTCTCCC chrI:14506844-14506924 63 5.56e-04 TTGGGAAAAA ATCAATAT TTTACCAAAA chrI:1816567-1816647 32 5.56e-04 TTTTTAGAAA ATCAATAT TTTTCCAGAA chrX:2841637-2841717 57 5.56e-04 GTATTGGAAA ATCAATAT TGCTAGCAAG chrIV:3738711-3738791 22 5.74e-04 CACGCAACTA ATCGATAG AACCGTTTCC chrI:10479100-10479180 29 7.28e-04 GAAGTAATTT ATTGATTA TTTTCCCGTT chrX:4576413-4576493 27 8.82e-04 GTTGGTGCCA ATCAATAA TATGCATGTG chrX:11974821-11974901 22 8.82e-04 TTTTGAAAAA ATCAATAA TCTTGTCCAG chrIV:977963-978043 41 8.82e-04 CATTAAAAAA ATCAATAA TTTCCCAAAA chrV:19100321-19100401 19 8.82e-04 TTTCAGAAAA ATCAATAA ATTTCCAAAA chrIII:12395254-12395334 38 8.82e-04 TGAAAAAAAA ATCAATAA TTACCTCCGC chrI:1815559-1815639 5 8.82e-04 GAAA ATCAATAA ATTCCGAGAA chrI:13576496-13576576 43 8.82e-04 GCAAAAAAAA ATCAATAA TTGCGTCAGA chrIV:11662583-11662663 50 8.82e-04 AAACACAGAA ATCAATAA TCCGTGTCGA chrV:20464989-20465069 21 8.82e-04 TGTGCGGAAA ATCAATAA TACAAACACG chrII:3374015-3374095 40 8.82e-04 TAAATCGAAA ATCAATAA AAAAGAAGAG chrIII:2013370-2013450 5 8.82e-04 AAAA ATCAATAA AACCCAAAAT chrII:2758654-2758734 63 8.82e-04 TGATTGAATA ATCAATAA TACGTCCACC chrII:4256679-4256759 21 8.82e-04 TCTTTGAAAA ATCAATAA ATTGTGGTTT chrIV:978357-978437 39 8.82e-04 TTTTAAAAAA ATCAATAA TTTCCCAAAA chrII:2502639-2502719 28 8.82e-04 ATAATGAAAA ATCAATAA AAGCAAGAGG chrI:11532855-11532935 27 8.82e-04 TTTGACGAAA ATCAATAA TTTTCACAAA chrI:13413094-13413174 31 8.82e-04 TTTGGAAAAA ATCAATAA AAAGAGACCG chrII:3315067-3315147 23 8.82e-04 atcaataaaa atcaataa aaaAAGGGGA chrX:3802890-3802970 47 8.92e-04 CTAGCGGAAA ATCGATGC GAGACTGCGC chrII:7061224-7061304 37 8.92e-04 CGGATGGAAA ATCGATGC GGAACAGAGA chrII:6191504-6191584 36 8.92e-04 TGACACGAAA ATCGATGC AGAGCAGGCG chrX:11658231-11658311 39 9.69e-04 GTTGTTCTTT ATTGATTC TGTGCTCTTG chrV:4812673-4812753 24 1.05e-03 ATGGAGCACA ATCAATAC GTGGCAGTGG chrI:1870818-1870898 38 1.05e-03 CTTTCGATTA ATCAATAC GTTGCAGTGC chrX:2261151-2261231 31 1.13e-03 CCCACCAAAA ATCGATGG TTTGGTCTCA chrX:14513612-14513692 7 1.67e-03 TAGATA ATCAATAG ATTTGGTCAA chrX:2898240-2898320 47 2.01e-03 CCCCCCAAAA ATCAATGC GCAACGACAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1727709-1727789 3.8e-05 25_[+1]_47 chrI:627938-628018 3.8e-05 38_[+1]_34 chrX:17222284-17222364 3.8e-05 56_[+1]_16 chrV:17926337-17926417 3.8e-05 26_[+1]_46 chrIII:2112914-2112994 3.8e-05 49_[+1]_23 chrI:14699154-14699234 3.8e-05 5_[+1]_67 chrI:2380734-2380814 3.8e-05 43_[+1]_29 chrI:13793794-13793874 3.8e-05 54_[+1]_18 chrII:12394250-12394330 3.8e-05 48_[+1]_24 chrI:647560-647640 3.8e-05 63_[+1]_9 chrIV:7017300-7017380 3.8e-05 17_[+1]_55 chrII:1500873-1500953 3.8e-05 34_[+1]_38 chrIII:11733108-11733188 3.8e-05 33_[+1]_39 chrIV:1437763-1437843 3.8e-05 23_[+1]_49 chrI:1392940-1393020 3.8e-05 41_[+1]_31 chrI:11488169-11488249 3.8e-05 27_[+1]_45 chrV:19087603-19087683 3.8e-05 56_[+1]_16 chrI:625261-625341 3.8e-05 6_[+1]_66 chrX:7222503-7222583 3.8e-05 36_[+1]_36 chrIV:15453556-15453636 3.8e-05 10_[+1]_62 chrI:11526066-11526146 3.8e-05 23_[+1]_49 chrIII:3242532-3242612 3.8e-05 8_[+1]_64 chrIII:11280079-11280159 3.8e-05 40_[+1]_32 chrIII:2961141-2961221 3.8e-05 27_[+1]_45 chrI:1435250-1435330 3.8e-05 40_[+1]_32 chrI:13806477-13806557 3.8e-05 19_[+1]_53 chrII:2192458-2192538 3.8e-05 19_[+1]_53 chrV:19010580-19010660 3.8e-05 55_[+1]_17 chrIV:14034728-14034808 3.8e-05 39_[+1]_33 chrI:2338124-2338204 3.8e-05 41_[+1]_31 chrIII:1085162-1085242 3.8e-05 66_[+1]_6 chrI:12759817-12759897 3.8e-05 58_[+1]_14 chrI:11385510-11385590 3.8e-05 5_[+1]_67 chrII:1341769-1341849 3.8e-05 60_[+1]_12 chrIV:1006796-1006876 3.8e-05 16_[+1]_56 chrIV:2391993-2392073 3.8e-05 14_[+1]_58 chrI:11388935-11389015 3.8e-05 45_[+1]_27 chrIII:1965335-1965415 3.8e-05 56_[+1]_16 chrI:651585-651665 3.8e-05 30_[+1]_42 chrII:13417614-13417694 3.8e-05 21_[+1]_51 chrI:2334883-2334963 3.8e-05 41_[+1]_31 chrI:1052009-1052089 3.8e-05 23_[+1]_49 chrI:627737-627817 3.8e-05 10_[+1]_62 chrIV:15528394-15528474 3.8e-05 51_[+1]_21 chrV:18993672-18993752 3.8e-05 37_[+1]_35 chrIV:1004878-1004958 3.8e-05 43_[+1]_29 chrX:5508077-5508157 3.8e-05 25_[+1]_47 chrI:692456-692536 3.8e-05 62_[+1]_10 chrIII:2112711-2112791 3.8e-05 28_[+1]_44 chrI:697829-697909 3.8e-05 30_[+1]_42 chrX:13105511-13105591 3.8e-05 37_[+1]_35 chrV:20105185-20105265 3.8e-05 27_[+1]_45 chrIV:206872-206952 3.8e-05 45_[+1]_27 chrIV:991819-991899 3.8e-05 22_[+1]_50 chrX:1339434-1339514 3.8e-05 49_[+1]_23 chrV:43230-43310 3.8e-05 25_[+1]_47 chrX:5841978-5842058 3.8e-05 36_[+1]_36 chrIII:2282408-2282488 3.8e-05 30_[+1]_42 chrII:13414266-13414346 3.8e-05 37_[+1]_35 chrIII:2780480-2780560 3.8e-05 34_[+1]_38 chrIV:2313894-2313974 3.8e-05 3_[+1]_69 chrIII:3170683-3170763 3.8e-05 18_[+1]_54 chrIII:2960935-2961015 3.8e-05 30_[+1]_42 chrIII:1578673-1578753 3.8e-05 39_[+1]_33 chrI:1487516-1487596 3.8e-05 42_[+1]_30 chrIII:2098346-2098426 3.8e-05 62_[+1]_10 chrIII:2328782-2328862 3.8e-05 49_[+1]_23 chrII:7755359-7755439 3.8e-05 28_[+1]_44 chrV:19633134-19633214 3.8e-05 11_[+1]_61 chrIII:2014072-2014152 3.8e-05 50_[+1]_22 chrIII:2995465-2995545 3.8e-05 52_[+1]_20 chrI:13805319-13805399 3.8e-05 42_[+1]_30 chrI:649963-650043 3.8e-05 43_[+1]_29 chrV:19630119-19630199 3.8e-05 50_[+1]_22 chrIV:848989-849069 3.8e-05 28_[+1]_44 chrII:3063563-3063643 3.8e-05 41_[+1]_31 chrIII:2014271-2014351 3.8e-05 22_[+1]_50 chrI:11384765-11384845 3.8e-05 70_[+1]_2 chrV:18984846-18984926 3.8e-05 40_[+1]_32 chrIV:1408320-1408400 3.8e-05 26_[+1]_46 chrIV:11694391-11694471 3.8e-05 39_[+1]_33 chrI:12214357-12214437 3.8e-05 23_[+1]_49 chrI:3375823-3375903 3.8e-05 37_[+1]_35 chrIII:204086-204166 3.8e-05 20_[+1]_52 chrI:11487312-11487392 3.8e-05 49_[+1]_23 chrV:19112718-19112798 3.8e-05 41_[+1]_31 chrII:12255698-12255778 3.8e-05 32_[+1]_40 chrIII:12411203-12411283 3.8e-05 21_[+1]_51 chrV:19113790-19113870 3.8e-05 37_[+1]_35 chrIII:1955686-1955766 3.8e-05 37_[+1]_35 chrV:19909569-19909649 3.8e-05 1_[+1]_71 chrI:354955-355035 3.8e-05 34_[+1]_38 chrI:11486072-11486152 3.8e-05 58_[+1]_14 chrI:1489489-1489569 3.8e-05 49_[+1]_23 chrIII:1580305-1580385 3.8e-05 62_[+1]_10 chrX:11290662-11290742 3.8e-05 55_[+1]_17 chrIV:16643932-16644012 3.8e-05 44_[+1]_28 chrIV:1443637-1443717 3.8e-05 38_[+1]_34 chrIII:2994141-2994221 3.8e-05 38_[+1]_34 chrX:17464944-17465024 3.8e-05 47_[+1]_25 chrI:649294-649374 3.8e-05 32_[+1]_40 chrIV:2236120-2236200 3.8e-05 58_[+1]_14 chrIII:1583661-1583741 3.8e-05 71_[+1]_1 chrIV:983733-983813 3.8e-05 43_[+1]_29 chrI:11592757-11592837 7.6e-05 69_[+1]_3 chrIV:6958953-6959033 7.6e-05 23_[+1]_49 chrV:19073394-19073474 7.6e-05 66_[+1]_6 chrI:113053-113133 7.6e-05 3_[+1]_69 chrX:11511354-11511434 7.6e-05 38_[+1]_34 chrIII:9272256-9272336 7.6e-05 36_[+1]_36 chrII:614888-614968 7.6e-05 34_[+1]_38 chrIII:1807677-1807757 7.6e-05 25_[+1]_47 chrII:3064145-3064225 7.6e-05 21_[+1]_51 chrII:13315998-13316078 7.6e-05 47_[+1]_25 chrIII:1834066-1834146 7.6e-05 58_[+1]_14 chrV:19099612-19099692 7.6e-05 72_[+1] chrII:13316238-13316318 7.6e-05 58_[+1]_14 chrI:3004068-3004148 7.6e-05 44_[+1]_28 chrIII:1807441-1807521 7.6e-05 35_[+1]_37 chrIV:1000590-1000670 7.6e-05 6_[+1]_66 chrII:14102277-14102357 0.00011 53_[+1]_19 chrIII:5906201-5906281 0.00015 22_[+1]_50 chrIII:2478794-2478874 0.00015 20_[+1]_52 chrII:12036662-12036742 0.00015 7_[+1]_65 chrV:7221237-7221317 0.00015 62_[+1]_10 chrII:2901359-2901439 0.00015 36_[+1]_36 chrX:183624-183704 0.00015 11_[+1]_61 chrIV:16049028-16049108 0.00015 50_[+1]_22 chrIV:1740819-1740899 0.00015 46_[+1]_26 chrI:1448996-1449076 0.00015 51_[+1]_21 chrI:11533054-11533134 0.00015 36_[+1]_36 chrIII:10861462-10861542 0.00015 37_[+1]_35 chrI:1816800-1816880 0.00015 26_[+1]_46 chrI:353358-353438 0.00015 50_[+1]_22 chrIII:2962002-2962082 0.00015 50_[+1]_22 chrIII:11710001-11710081 0.00015 25_[+1]_47 chrIII:4301452-4301532 0.00015 33_[+1]_39 chrV:687687-687767 0.00015 17_[+1]_55 chrIII:10120243-10120323 0.00015 38_[+1]_34 chrIII:11129539-11129619 0.00015 53_[+1]_19 chrII:724179-724259 0.00015 26_[+1]_46 chrI:2937068-2937148 0.00015 48_[+1]_24 chrX:15431101-15431181 0.00015 45_[+1]_27 chrIII:10819429-10819509 0.00015 66_[+1]_6 chrI:1987503-1987583 0.00015 22_[+1]_50 chrV:19101757-19101837 0.00015 29_[+1]_43 chrI:1643233-1643313 0.00015 16_[+1]_56 chrIII:1618450-1618530 0.00015 57_[+1]_15 chrIV:1740608-1740688 0.00015 57_[+1]_15 chrII:13315797-13315877 0.00015 28_[+1]_44 chrV:19026923-19027003 0.00015 27_[+1]_45 chrIII:1876444-1876524 0.00015 20_[+1]_52 chrI:11533774-11533854 0.00015 40_[+1]_32 chrIII:1058211-1058291 0.00015 62_[+1]_10 chrIV:999849-999929 0.00015 6_[+1]_66 chrII:12301404-12301484 0.00015 35_[+1]_37 chrV:19027523-19027603 0.00015 32_[+1]_40 chrIII:1805746-1805826 0.00015 57_[+1]_15 chrIII:11615037-11615117 0.00015 3_[+1]_69 chrIII:11614447-11614527 0.00015 7_[+1]_65 chrIII:1879061-1879141 0.00015 21_[+1]_51 chrII:12805327-12805407 0.00015 43_[+1]_29 chrI:11486635-11486715 0.00015 26_[+1]_46 chrIII:1892315-1892395 0.00015 32_[+1]_40 chrV:19907539-19907619 0.00015 29_[+1]_43 chrI:11377410-11377490 0.00015 13_[+1]_59 chrIII:11971524-11971604 0.00015 14_[+1]_58 chrIII:2837468-2837548 0.00015 43_[+1]_29 chrIV:1435330-1435410 0.00015 44_[+1]_28 chrIII:2283605-2283685 0.00015 34_[+1]_38 chrIII:2837217-2837297 0.00015 8_[+1]_64 chrIII:2836876-2836956 0.00015 27_[+1]_45 chrIV:17119146-17119226 0.00015 34_[+1]_38 chrII:7885007-7885087 0.00017 70_[+1]_2 chrIV:13375062-13375142 0.00017 60_[+1]_12 chrIII:5879454-5879534 0.00019 15_[+1]_57 chrV:20104576-20104656 0.00019 41_[+1]_31 chrII:5820428-5820508 0.00021 71_[+1]_1 chrX:5121950-5122030 0.00036 42_[+1]_30 chrV:13819827-13819907 0.00036 42_[+1]_30 chrI:4996084-4996164 0.00036 19_[+1]_53 chrII:3070295-3070375 0.00036 43_[+1]_29 chrI:626041-626121 0.00036 28_[+1]_44 chrIII:1584462-1584542 0.00036 66_[+1]_6 chrIV:8986901-8986981 0.00036 48_[+1]_24 chrII:3291440-3291520 0.00036 15_[+1]_57 chrIV:17329045-17329125 0.00036 67_[+1]_5 chrV:19121253-19121333 0.00036 28_[+1]_44 chrI:13724761-13724841 0.00036 72_[+1] chrII:13641474-13641554 0.00036 35_[+1]_37 chrV:18940974-18941054 0.00036 34_[+1]_38 chrI:2365022-2365102 0.00036 45_[+1]_27 chrIII:12978585-12978665 0.00036 32_[+1]_40 chrIII:2419689-2419769 0.00036 70_[+1]_2 chrV:19902024-19902104 0.00036 29_[+1]_43 chrV:19635651-19635731 0.00036 35_[+1]_37 chrI:96152-96232 0.00036 54_[+1]_18 chrV:5558135-5558215 0.00036 64_[+1]_8 chrV:19904946-19905026 0.00036 34_[+1]_38 chrV:19906161-19906241 0.00036 50_[+1]_22 chrI:1488242-1488322 0.00036 48_[+1]_24 chrIII:9950256-9950336 0.00038 59_[+1]_13 chrIII:9144074-9144154 0.00056 48_[+1]_24 chrI:14506844-14506924 0.00056 62_[+1]_10 chrI:1816567-1816647 0.00056 31_[+1]_41 chrX:2841637-2841717 0.00056 56_[+1]_16 chrIV:3738711-3738791 0.00057 21_[+1]_51 chrI:10479100-10479180 0.00073 28_[+1]_44 chrX:4576413-4576493 0.00088 26_[+1]_46 chrX:11974821-11974901 0.00088 21_[+1]_51 chrIV:977963-978043 0.00088 40_[+1]_32 chrV:19100321-19100401 0.00088 18_[+1]_54 chrIII:12395254-12395334 0.00088 37_[+1]_35 chrI:1815559-1815639 0.00088 4_[+1]_68 chrI:13576496-13576576 0.00088 42_[+1]_30 chrIV:11662583-11662663 0.00088 49_[+1]_23 chrV:20464989-20465069 0.00088 20_[+1]_52 chrII:3374015-3374095 0.00088 39_[+1]_33 chrIII:2013370-2013450 0.00088 4_[+1]_68 chrII:2758654-2758734 0.00088 62_[+1]_10 chrII:4256679-4256759 0.00088 20_[+1]_52 chrIV:978357-978437 0.00088 38_[+1]_34 chrII:2502639-2502719 0.00088 27_[+1]_45 chrI:11532855-11532935 0.00088 26_[+1]_46 chrI:13413094-13413174 0.00088 30_[+1]_42 chrII:3315067-3315147 0.00088 22_[+1]_50 chrX:3802890-3802970 0.00089 46_[+1]_26 chrII:7061224-7061304 0.00089 36_[+1]_36 chrII:6191504-6191584 0.00089 35_[+1]_37 chrX:11658231-11658311 0.00097 38_[+1]_34 chrV:4812673-4812753 0.001 23_[+1]_49 chrI:1870818-1870898 0.001 37_[+1]_35 chrX:2261151-2261231 0.0011 30_[+1]_42 chrX:14513612-14513692 0.0017 6_[+1]_66 chrX:2898240-2898320 0.002 46_[+1]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATCGATWT width=8 seqs=235 chrIV:1727709-1727789 ( 26) ATCGATTT 1 chrI:627938-628018 ( 39) ATCGATTT 1 chrX:17222284-17222364 ( 57) ATCGATTT 1 chrV:17926337-17926417 ( 27) ATCGATTT 1 chrIII:2112914-2112994 ( 50) ATCGATTT 1 chrI:14699154-14699234 ( 6) ATCGATTT 1 chrI:2380734-2380814 ( 44) ATCGATTT 1 chrI:13793794-13793874 ( 55) ATCGATTT 1 chrII:12394250-12394330 ( 49) ATCGATTT 1 chrI:647560-647640 ( 64) ATCGATTT 1 chrIV:7017300-7017380 ( 18) ATCGATTT 1 chrII:1500873-1500953 ( 35) ATCGATTT 1 chrIII:11733108-11733188 ( 34) ATCGATTT 1 chrIV:1437763-1437843 ( 24) ATCGATTT 1 chrI:1392940-1393020 ( 42) ATCGATTT 1 chrI:11488169-11488249 ( 28) ATCGATTT 1 chrV:19087603-19087683 ( 57) ATCGATTT 1 chrI:625261-625341 ( 7) ATCGATTT 1 chrX:7222503-7222583 ( 37) ATCGATTT 1 chrIV:15453556-15453636 ( 11) ATCGATTT 1 chrI:11526066-11526146 ( 24) ATCGATTT 1 chrIII:3242532-3242612 ( 9) ATCGATTT 1 chrIII:11280079-11280159 ( 41) ATCGATTT 1 chrIII:2961141-2961221 ( 28) ATCGATTT 1 chrI:1435250-1435330 ( 41) ATCGATTT 1 chrI:13806477-13806557 ( 20) ATCGATTT 1 chrII:2192458-2192538 ( 20) ATCGATTT 1 chrV:19010580-19010660 ( 56) ATCGATTT 1 chrIV:14034728-14034808 ( 40) ATCGATTT 1 chrI:2338124-2338204 ( 42) ATCGATTT 1 chrIII:1085162-1085242 ( 67) ATCGATTT 1 chrI:12759817-12759897 ( 59) ATCGATTT 1 chrI:11385510-11385590 ( 6) ATCGATTT 1 chrII:1341769-1341849 ( 61) ATCGATTT 1 chrIV:1006796-1006876 ( 17) ATCGATTT 1 chrIV:2391993-2392073 ( 15) ATCGATTT 1 chrI:11388935-11389015 ( 46) ATCGATTT 1 chrIII:1965335-1965415 ( 57) ATCGATTT 1 chrI:651585-651665 ( 31) ATCGATTT 1 chrII:13417614-13417694 ( 22) ATCGATTT 1 chrI:2334883-2334963 ( 42) ATCGATTT 1 chrI:1052009-1052089 ( 24) ATCGATTT 1 chrI:627737-627817 ( 11) ATCGATTT 1 chrIV:15528394-15528474 ( 52) ATCGATTT 1 chrV:18993672-18993752 ( 38) ATCGATTT 1 chrIV:1004878-1004958 ( 44) ATCGATTT 1 chrX:5508077-5508157 ( 26) ATCGATTT 1 chrI:692456-692536 ( 63) ATCGATTT 1 chrIII:2112711-2112791 ( 29) ATCGATTT 1 chrI:697829-697909 ( 31) ATCGATTT 1 chrX:13105511-13105591 ( 38) ATCGATTT 1 chrV:20105185-20105265 ( 28) ATCGATTT 1 chrIV:206872-206952 ( 46) ATCGATTT 1 chrIV:991819-991899 ( 23) ATCGATTT 1 chrX:1339434-1339514 ( 50) ATCGATTT 1 chrV:43230-43310 ( 26) ATCGATTT 1 chrX:5841978-5842058 ( 37) ATCGATTT 1 chrIII:2282408-2282488 ( 31) ATCGATTT 1 chrII:13414266-13414346 ( 38) ATCGATTT 1 chrIII:2780480-2780560 ( 35) ATCGATTT 1 chrIV:2313894-2313974 ( 4) ATCGATTT 1 chrIII:3170683-3170763 ( 19) ATCGATTT 1 chrIII:2960935-2961015 ( 31) ATCGATTT 1 chrIII:1578673-1578753 ( 40) ATCGATTT 1 chrI:1487516-1487596 ( 43) ATCGATTT 1 chrIII:2098346-2098426 ( 63) ATCGATTT 1 chrIII:2328782-2328862 ( 50) ATCGATTT 1 chrII:7755359-7755439 ( 29) ATCGATTT 1 chrV:19633134-19633214 ( 12) ATCGATTT 1 chrIII:2014072-2014152 ( 51) ATCGATTT 1 chrIII:2995465-2995545 ( 53) ATCGATTT 1 chrI:13805319-13805399 ( 43) ATCGATTT 1 chrI:649963-650043 ( 44) ATCGATTT 1 chrV:19630119-19630199 ( 51) ATCGATTT 1 chrIV:848989-849069 ( 29) ATCGATTT 1 chrII:3063563-3063643 ( 42) ATCGATTT 1 chrIII:2014271-2014351 ( 23) ATCGATTT 1 chrI:11384765-11384845 ( 71) ATCGATTT 1 chrV:18984846-18984926 ( 41) ATCGATTT 1 chrIV:1408320-1408400 ( 27) ATCGATTT 1 chrIV:11694391-11694471 ( 40) ATCGATTT 1 chrI:12214357-12214437 ( 24) ATCGATTT 1 chrI:3375823-3375903 ( 38) ATCGATTT 1 chrIII:204086-204166 ( 21) ATCGATTT 1 chrI:11487312-11487392 ( 50) ATCGATTT 1 chrV:19112718-19112798 ( 42) ATCGATTT 1 chrII:12255698-12255778 ( 33) ATCGATTT 1 chrIII:12411203-12411283 ( 22) ATCGATTT 1 chrV:19113790-19113870 ( 38) ATCGATTT 1 chrIII:1955686-1955766 ( 38) ATCGATTT 1 chrV:19909569-19909649 ( 2) ATCGATTT 1 chrI:354955-355035 ( 35) ATCGATTT 1 chrI:11486072-11486152 ( 59) ATCGATTT 1 chrI:1489489-1489569 ( 50) ATCGATTT 1 chrIII:1580305-1580385 ( 63) ATCGATTT 1 chrX:11290662-11290742 ( 56) ATCGATTT 1 chrIV:16643932-16644012 ( 45) ATCGATTT 1 chrIV:1443637-1443717 ( 39) ATCGATTT 1 chrIII:2994141-2994221 ( 39) ATCGATTT 1 chrX:17464944-17465024 ( 48) ATCGATTT 1 chrI:649294-649374 ( 33) ATCGATTT 1 chrIV:2236120-2236200 ( 59) ATCGATTT 1 chrIII:1583661-1583741 ( 72) ATCGATTT 1 chrIV:983733-983813 ( 44) ATCGATTT 1 chrI:11592757-11592837 ( 70) ATCGATAT 1 chrIV:6958953-6959033 ( 24) ATCGATAT 1 chrV:19073394-19073474 ( 67) ATCGATAT 1 chrI:113053-113133 ( 4) ATCGATAT 1 chrX:11511354-11511434 ( 39) ATCGATAT 1 chrIII:9272256-9272336 ( 37) ATCGATAT 1 chrII:614888-614968 ( 35) ATCGATAT 1 chrIII:1807677-1807757 ( 26) ATCGATAT 1 chrII:3064145-3064225 ( 22) ATCGATAT 1 chrII:13315998-13316078 ( 48) ATCGATAT 1 chrIII:1834066-1834146 ( 59) ATCGATAT 1 chrV:19099612-19099692 ( 73) ATCGATAT 1 chrII:13316238-13316318 ( 59) ATCGATAT 1 chrI:3004068-3004148 ( 45) ATCGATAT 1 chrIII:1807441-1807521 ( 36) ATCGATAT 1 chrIV:1000590-1000670 ( 7) ATCGATAT 1 chrII:14102277-14102357 ( 54) ATCGATTA 1 chrIII:5906201-5906281 ( 23) ATCGATAA 1 chrIII:2478794-2478874 ( 21) ATCGATAA 1 chrII:12036662-12036742 ( 8) ATCGATAA 1 chrV:7221237-7221317 ( 63) ATCGATAA 1 chrII:2901359-2901439 ( 37) ATCGATAA 1 chrX:183624-183704 ( 12) ATCGATAA 1 chrIV:16049028-16049108 ( 51) ATCGATAA 1 chrIV:1740819-1740899 ( 47) ATCGATAA 1 chrI:1448996-1449076 ( 52) ATCGATAA 1 chrI:11533054-11533134 ( 37) ATCGATAA 1 chrIII:10861462-10861542 ( 38) ATCGATAA 1 chrI:1816800-1816880 ( 27) ATCGATAA 1 chrI:353358-353438 ( 51) ATCGATAA 1 chrIII:2962002-2962082 ( 51) ATCGATAA 1 chrIII:11710001-11710081 ( 26) ATCGATAA 1 chrIII:4301452-4301532 ( 34) ATCGATAA 1 chrV:687687-687767 ( 18) ATCGATAA 1 chrIII:10120243-10120323 ( 39) ATCGATAA 1 chrIII:11129539-11129619 ( 54) ATCGATAA 1 chrII:724179-724259 ( 27) ATCGATAA 1 chrI:2937068-2937148 ( 49) ATCGATAA 1 chrX:15431101-15431181 ( 46) ATCGATAA 1 chrIII:10819429-10819509 ( 67) ATCGATAA 1 chrI:1987503-1987583 ( 23) ATCGATAA 1 chrV:19101757-19101837 ( 30) ATCGATAA 1 chrI:1643233-1643313 ( 17) ATCGATAA 1 chrIII:1618450-1618530 ( 58) ATCGATAA 1 chrIV:1740608-1740688 ( 58) ATCGATAA 1 chrII:13315797-13315877 ( 29) ATCGATAA 1 chrV:19026923-19027003 ( 28) ATCGATAA 1 chrIII:1876444-1876524 ( 21) ATCGATAA 1 chrI:11533774-11533854 ( 41) ATCGATAA 1 chrIII:1058211-1058291 ( 63) ATCGATAA 1 chrIV:999849-999929 ( 7) ATCGATAA 1 chrII:12301404-12301484 ( 36) ATCGATAA 1 chrV:19027523-19027603 ( 33) ATCGATAA 1 chrIII:1805746-1805826 ( 58) ATCGATAA 1 chrIII:11615037-11615117 ( 4) ATCGATAA 1 chrIII:11614447-11614527 ( 8) ATCGATAA 1 chrIII:1879061-1879141 ( 22) ATCGATAA 1 chrII:12805327-12805407 ( 44) ATCGATAA 1 chrI:11486635-11486715 ( 27) ATCGATAA 1 chrIII:1892315-1892395 ( 33) ATCGATAA 1 chrV:19907539-19907619 ( 30) ATCGATAA 1 chrI:11377410-11377490 ( 14) ATCGATAA 1 chrIII:11971524-11971604 ( 15) ATCGATAA 1 chrIII:2837468-2837548 ( 44) ATCGATAA 1 chrIV:1435330-1435410 ( 45) ATCGATAA 1 chrIII:2283605-2283685 ( 35) ATCGATAA 1 chrIII:2837217-2837297 ( 9) ATCGATAA 1 chrIII:2836876-2836956 ( 28) ATCGATAA 1 chrIV:17119146-17119226 ( 35) ATCGATAA 1 chrII:7885007-7885087 ( 71) ATCGATTC 1 chrIV:13375062-13375142 ( 61) ATCGATTC 1 chrIII:5879454-5879534 ( 16) ATCGATAC 1 chrV:20104576-20104656 ( 42) ATCGATAC 1 chrII:5820428-5820508 ( 72) ATCGATGT 1 chrX:5121950-5122030 ( 43) ATTGATTT 1 chrV:13819827-13819907 ( 43) ATTGATTT 1 chrI:4996084-4996164 ( 20) ATTGATTT 1 chrII:3070295-3070375 ( 44) ATTGATTT 1 chrI:626041-626121 ( 29) ATTGATTT 1 chrIII:1584462-1584542 ( 67) ATTGATTT 1 chrIV:8986901-8986981 ( 49) ATTGATTT 1 chrII:3291440-3291520 ( 16) ATTGATTT 1 chrIV:17329045-17329125 ( 68) ATTGATTT 1 chrV:19121253-19121333 ( 29) ATTGATTT 1 chrI:13724761-13724841 ( 73) ATTGATTT 1 chrII:13641474-13641554 ( 36) ATTGATTT 1 chrV:18940974-18941054 ( 35) ATTGATTT 1 chrI:2365022-2365102 ( 46) ATTGATTT 1 chrIII:12978585-12978665 ( 33) ATTGATTT 1 chrIII:2419689-2419769 ( 71) ATTGATTT 1 chrV:19902024-19902104 ( 30) ATTGATTT 1 chrV:19635651-19635731 ( 36) ATTGATTT 1 chrI:96152-96232 ( 55) ATTGATTT 1 chrV:5558135-5558215 ( 65) ATTGATTT 1 chrV:19904946-19905026 ( 35) ATTGATTT 1 chrV:19906161-19906241 ( 51) ATTGATTT 1 chrI:1488242-1488322 ( 49) ATTGATTT 1 chrIII:9950256-9950336 ( 60) ATCGATTG 1 chrIII:9144074-9144154 ( 49) ATCAATAT 1 chrI:14506844-14506924 ( 63) ATCAATAT 1 chrI:1816567-1816647 ( 32) ATCAATAT 1 chrX:2841637-2841717 ( 57) ATCAATAT 1 chrIV:3738711-3738791 ( 22) ATCGATAG 1 chrI:10479100-10479180 ( 29) ATTGATTA 1 chrX:4576413-4576493 ( 27) ATCAATAA 1 chrX:11974821-11974901 ( 22) ATCAATAA 1 chrIV:977963-978043 ( 41) ATCAATAA 1 chrV:19100321-19100401 ( 19) ATCAATAA 1 chrIII:12395254-12395334 ( 38) ATCAATAA 1 chrI:1815559-1815639 ( 5) ATCAATAA 1 chrI:13576496-13576576 ( 43) ATCAATAA 1 chrIV:11662583-11662663 ( 50) ATCAATAA 1 chrV:20464989-20465069 ( 21) ATCAATAA 1 chrII:3374015-3374095 ( 40) ATCAATAA 1 chrIII:2013370-2013450 ( 5) ATCAATAA 1 chrII:2758654-2758734 ( 63) ATCAATAA 1 chrII:4256679-4256759 ( 21) ATCAATAA 1 chrIV:978357-978437 ( 39) ATCAATAA 1 chrII:2502639-2502719 ( 28) ATCAATAA 1 chrI:11532855-11532935 ( 27) ATCAATAA 1 chrI:13413094-13413174 ( 31) ATCAATAA 1 chrII:3315067-3315147 ( 23) ATCAATAA 1 chrX:3802890-3802970 ( 47) ATCGATGC 1 chrII:7061224-7061304 ( 37) ATCGATGC 1 chrII:6191504-6191584 ( 36) ATCGATGC 1 chrX:11658231-11658311 ( 39) ATTGATTC 1 chrV:4812673-4812753 ( 24) ATCAATAC 1 chrI:1870818-1870898 ( 38) ATCAATAC 1 chrX:2261151-2261231 ( 31) ATCGATGG 1 chrX:14513612-14513692 ( 7) ATCAATAG 1 chrX:2898240-2898320 ( 47) ATCAATGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.92071 E= 1.0e-300 158 -1452 -1452 -1452 -1452 -1452 -1452 158 -1452 241 -1452 -165 -159 -1452 245 -1452 158 -1452 -1452 -1452 -1452 -1452 -1452 158 29 -1452 -267 76 -12 -185 -326 91 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 235 E= 1.0e-300 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.893617 0.000000 0.106383 0.110638 0.000000 0.889362 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.408511 0.000000 0.025532 0.565957 0.306383 0.046809 0.017021 0.629787 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCGATWT MEME-1 regular expression -------------------------------------------------------------------------------- ATCGAT[TA][TA] -------------------------------------------------------------------------------- Time 6.72 secs. ******************************************************************************** ******************************************************************************** MOTIF WWATCGAT MEME-2 width = 8 sites = 149 llr = 1121 E-value = 3.5e-112 ******************************************************************************** -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 66a::2a: pos.-specific C ::::9::: probability G :::::8:: matrix T 44:a1::a bits 2.6 2.4 2.1 1.8 ** Relative 1.6 ***** Entropy 1.3 ****** (10.8 bits) 1.0 ****** 0.8 ****** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AAATCGAT consensus TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrI:13793794-13793874 73 3.82e-05 TTCCATCAAA AAATCGAT chrII:2901359-2901439 66 3.82e-05 TTCACTGAAA AAATCGAT AAATCGT chrX:183624-183704 70 3.82e-05 atttccagaa aaatcgat aaa chrIV:1740819-1740899 5 3.82e-05 tgaa aaatcgat aaattttcag chrIV:15453556-15453636 40 3.82e-05 AATCCACGAA AAATCGAT AAAAAACTAA chrIII:3242532-3242612 33 3.82e-05 AATCAACAAA AAATCGAT AATTTCCGTA chrI:11533054-11533134 73 3.82e-05 ATTTTCACAA AAATCGAT chrI:1816800-1816880 6 3.82e-05 CAAGA AAATCGAT AAATTCCTAG chrIII:11280079-11280159 21 3.82e-05 TTCTTTGTAA AAATCGAT AAAATTGGAT chrI:13806477-13806557 35 3.82e-05 TTTTCCCGCA AAATCGAT AAATTATATG chrV:19010580-19010660 25 3.82e-05 TGCCGCCGGA AAATCGAT AATCACCGAA chrIII:1085162-1085242 11 3.82e-05 GCGTTTTAAA AAATCGAT AATTGGTGTC chrI:12759817-12759897 30 3.82e-05 AGCCTGAAAA AAATCGAT AATTGATCAT chrII:724179-724259 5 3.82e-05 TTAA AAATCGAT AATTTTATTG chrIII:1807677-1807757 43 3.82e-05 tcttatcgga aaatcgat aatttctcgg chrII:3064145-3064225 49 3.82e-05 AAATTGAAAA AAATCGAT ATTTTTCAAA chrI:2937068-2937148 6 3.82e-05 ACTAA AAATCGAT AATTTCCACC chrV:20105185-20105265 63 3.82e-05 AATCGGAAAA AAATCGAT TTTTCCAGAA chrI:1987503-1987583 59 3.82e-05 ATTCTTGGAA AAATCGAT AATTTTCAGT chrV:43230-43310 67 3.82e-05 TTTCCAGGAA AAATCGAT AAATCA chrI:1643233-1643313 45 3.82e-05 TCAGGCAGAA AAATCGAT AAATGACCAA chrIV:2313894-2313974 22 3.82e-05 TTCGGGTAGA AAATCGAT AAACTCACGC chrIII:1834066-1834146 34 3.82e-05 ttttctgaaa aaatcgat aattttccaa chrIII:1578673-1578753 66 3.82e-05 TCTGTTCAGA AAATCGAT AAATATT chrI:1487516-1487596 29 3.82e-05 GCAATCAAAA AAATCGAT AAAGTTATCG chrV:19099612-19099692 34 3.82e-05 TGAACTGAAA AAATCGAT AATTTTCAAA chrIII:2098346-2098426 2 3.82e-05 A AAATCGAT CATTTAGCAC chrII:13316238-13316318 31 3.82e-05 AAAAATCGAA AAATCGAT AAATTTGGTA chrIII:2995465-2995545 72 3.82e-05 TGCAAAAAGA AAATCGAT A chrII:3063563-3063643 29 3.82e-05 TTTCACTAGA AAATCGAT AATTTATCGA chrII:13315797-13315877 46 3.82e-05 AATTTTGGAA AAATCGAT AAATTTTGAA chrV:19026923-19027003 46 3.82e-05 attttcagaa aaatcgat aaattttcag chrIII:1807441-1807521 15 3.82e-05 atttatcgga aaatcgat atcttatcgg chrI:11533774-11533854 20 3.82e-05 ATTTCCCGAA AAATCGAT AATTTCTCGA chrIV:999849-999929 23 3.82e-05 AATTTTCAAA AAATCGAT ACTTTCAGGA chrII:12301404-12301484 6 3.82e-05 TCAAA AAATCGAT AATTTTTGGA chrV:19027523-19027603 51 3.82e-05 attccagaaa aaatcgat aaaattctga chrIII:11615037-11615117 60 3.82e-05 ATTTTCCCAA AAATCGAT AATTTCCACA chrIII:11614447-11614527 45 3.82e-05 TTGTCACAAA AAATCGAT AACTGTCACA chrIII:1879061-1879141 60 3.82e-05 ttttctgaaa aaatcgat aattttcgga chrI:11486635-11486715 6 3.82e-05 ATCAA AAATCGAT AATTTCCAGA chrIII:1892315-1892395 49 3.82e-05 AACTCGTCGG AAATCGAT AATTCGTCGG chrIII:1580305-1580385 38 3.82e-05 TTTTTCAGAA AAATCGAT ATTTCGCCAC chrV:19907539-19907619 48 3.82e-05 atttccaaaa aaatcgat aaatttccag chrIII:2837468-2837548 2 3.82e-05 a aaatcgat aatttctgga chrIII:1583661-1583741 49 3.82e-05 CTTCTAAAAA AAATCGAT AATTCGCGCG chrIV:1435330-1435410 4 3.82e-05 caa aaatcgat aaattcccaa chrIV:1000590-1000670 66 3.82e-05 TTTGTCCAAA AAATCGAT ATTGTTC chrIII:2283605-2283685 13 3.82e-05 TTTTGCAAGA AAATCGAT AATTTTGCAA chrIII:2837217-2837297 44 3.82e-05 atttcctgaa aaatcgat aatttccgga chrIII:2836876-2836956 45 3.82e-05 atttccggaa aaatcgat agtttcctga chrIII:9538941-9539021 38 7.65e-05 GACCTAGAAT ATATCGAT CGTCGTAGCG chrI:11388935-11389015 25 7.65e-05 TTTGATGAAA ATATCGAT TTTCCGGTAA chrIII:2112711-2112791 66 7.65e-05 CCTTCGGAAA ATATCGAT TTTTCAA chrI:11487312-11487392 10 7.65e-05 TTCAAGAAA ATATCGAT TTTTGCACGA chrII:12255698-12255778 67 7.65e-05 TCCAAGGAAA ATATCGAT TTTTTT chrI:354955-355035 52 7.65e-05 tttctggaat atatcgat ttttctggaa chrII:13417614-13417694 48 1.15e-04 aaatcggcaa taatcgat tttttgaaaa chrIV:1408320-1408400 64 1.15e-04 ttctggaaat taatcgat ttttaggaa chrIV:1727709-1727789 43 1.53e-04 TTTACTCAAA TTATCGAT TTTTCACTTT chrI:14699154-14699234 18 1.53e-04 CGATTTTTTA TTATCGAT TCCACAAAAA chrI:2380734-2380814 62 1.53e-04 TTGATAGAAA TTATCGAT TTTTCATGGA chrII:12394250-12394330 6 1.53e-04 CAAAT TTATCGAT TTTTACAAAA chrI:647560-647640 42 1.53e-04 TAGTTGAAAT TTATCGAT TTTCCCTCGA chrIII:11733108-11733188 16 1.53e-04 TTTTCGGAAT TTATCGAT TTTTCGGAAT chrI:625261-625341 46 1.53e-04 AAATCAATAA TTATCGAT TTTTCCGATT chrI:113053-113133 73 1.53e-04 TTTGGCTAGA TTATCGAT chrI:11526066-11526146 63 1.53e-04 TTTCACTAAA TTATCGAT TATATGACGA chrIII:2961141-2961221 56 1.53e-04 ttctgacaat ttatcgat tttttcggaa chrI:651585-651665 67 1.53e-04 TTTCGGATAA TTATCGAT TTTTCC chrI:2334883-2334963 56 1.53e-04 ATTTTTGAAA TTATCGAT TTTTGAAAGT chrIV:1004878-1004958 69 1.53e-04 TTCGGTAAAT TTATCGAT TTTT chrI:697829-697909 72 1.53e-04 TTTGAGAAAA TTATCGAT C chrIII:2282408-2282488 49 1.53e-04 tttcgcgaaa ttatcgat ttttcgcgga chrII:13414266-13414346 62 1.53e-04 aaatcgtcaa ttatcgat tttttggaaa chrIII:3170683-3170763 52 1.53e-04 TTCTAGAAAT TTATCGAT TTTCCGAAAA chrIII:2960935-2961015 59 1.53e-04 ttcggaacat ttatcgat ttttcagaaa chrIII:2014072-2014152 10 1.53e-04 tccttaaaa ttatcgat tttccgtaga chrI:13805319-13805399 73 1.53e-04 TTCGGTTATA TTATCGAT chrI:649963-650043 22 1.53e-04 TTTCGGATAA TTATCGAT TTTTTCCGAT chrIV:848989-849069 67 1.53e-04 ttcttccaaa ttatcgat ttttct chrIII:2014271-2014351 59 1.53e-04 tttagtgaaa ttatcgat ttttccataa chrI:11384765-11384845 9 1.53e-04 CGATGAAA TTATCGAT TTTTCGATGA chrV:18984846-18984926 59 1.53e-04 ttctggaaat ttatcgat ttttctgaaa chrI:12214357-12214437 66 1.53e-04 ATAAAAAAAA TTATCGAT TTTTTGA chrV:19112718-19112798 20 1.53e-04 ttctagaaat ttatcgat ttttctagaa chrIII:12411203-12411283 1 1.53e-04 . TTATCGAT TTTTGAAGAA chrV:19113790-19113870 16 1.53e-04 ttctggaatt ttatcgat ttttctggaa chrIII:1955686-1955766 14 1.53e-04 TTTCAGAAAA TTATCGAT TTTTTTTTTG chrI:11486072-11486152 19 1.53e-04 CTCAATTAAA ttatcgat tttccgagaa chrIV:16643932-16644012 71 1.53e-04 attcgagaaa ttatcgat tt chrIV:1443637-1443717 57 1.53e-04 ttctggaatt ttatcgat ttttctgaga chrIII:2994141-2994221 6 1.53e-04 TAGAT TTATCGAT TTTTCTTGGG chrI:649294-649374 48 1.53e-04 tttttgcaat ttatcgat tttttgaaat chrIV:983733-983813 62 1.53e-04 TTTCGAAATT TTATCGAT TTTTCAGAAT chrIII:2478794-2478874 38 2.31e-04 aaaaatcaat aaatcaat aaatTTTCCA chrI:627938-628018 27 2.31e-04 TTTTTTGGAA AAATCAAT AATTATCGAT chrII:7885007-7885087 31 2.31e-04 CAAAGACACC AAATCAAT AAGTAGCCGT chrII:12036662-12036742 16 2.31e-04 AAATCGATAA AAATCAAT AATTTTACCT chrV:19073394-19073474 21 2.31e-04 TTTTCTTGAA AAATCAAT AATTTTTCTT chrIV:977963-978043 18 2.31e-04 ATTTCCCAAA AAATCAAT AATTTCATTA chrI:11488169-11488249 7 2.31e-04 CCGGAA AAATCAAT AAATTGCTGT chrII:3070295-3070375 71 2.31e-04 TTCCAGTGAA AAATCAAT AA chrI:1448996-1449076 70 2.31e-04 TTTTCATCAA AAATCAAT AAT chrIII:1584462-1584542 41 2.31e-04 AAAATCCGGG AAATCAAT AAATACGGTT chrIII:2962002-2962082 26 2.31e-04 TGTGTTTTTG AAATCAAT AAAATCTTTC chrV:19100321-19100401 37 2.31e-04 ATTTCCAAAA AAATCAAT AAATTTTCAG chrII:614888-614968 55 2.31e-04 TTCCGGGAAA AAATCAAT AATTATAAGG chrI:627737-627817 38 2.31e-04 TTTTTGTAAA AAATCAAT AGTTTTCGAT chrI:1816567-1816647 11 2.31e-04 AATTTCCAGA AAATCAAT AAATTTTTAG chrV:19101757-19101837 9 2.31e-04 ttccagaa aaatcaat aaattttcaa chrIV:978357-978437 56 2.31e-04 ATTTCCCAAA AAATCAAT AATTTCCCAA chrIV:1740608-1740688 16 2.31e-04 ACTCTCAGAA AAATCAAT AAATTCTCAG chrI:11532855-11532935 6 2.31e-04 GACGA AAATCAAT AATTTTGACG chrIII:1876444-1876524 40 2.31e-04 TTTAGAAAAA AAATCAAT AATTTCGAAG chrI:96152-96232 43 2.31e-04 CGCTGCACAA AAATCAAT AATTATTGAT chrV:19906161-19906241 11 2.31e-04 atttccagaa aaatcaat aacatttgag chrI:11377410-11377490 32 2.31e-04 AATTCCAGAA AAATCAAT AAAATTCTGT chrIV:2236120-2236200 6 2.31e-04 GAAAA AAATCAAT ATTTATCGCC chrII:3315067-3315147 11 2.31e-04 AGTTTAGCaa aaatcaat aaaaatcaat chrIII:2112914-2112994 12 4.04e-04 acttttagaa atatcaat attttcataa chrV:19087603-19087683 5 4.04e-04 GACC AAATTGAT CTAGACTGCA chrIII:10861462-10861542 54 4.04e-04 AATTCGAAAC AAGTCGAT TTTTGTCGAA chrI:353358-353438 12 4.04e-04 aatttccgga aaattgat aaattccaga chrV:20457347-20457427 33 4.04e-04 CATGCGCAAA AAGTCGAT AAAAACGGAC chrII:4256679-4256759 50 4.04e-04 TTTGTTGCAA AAGTCGAT GTTTGCCATT chrIII:2780480-2780560 72 4.04e-04 GAGCGGCGGA AAGTCGAT A chrI:1489489-1489569 12 4.04e-04 CGGCGATAAA AAATTGAT AAAAGTATTG chrI:2365022-2365102 24 5.77e-04 TTCTAGAACA ATATTGAT TTTTCTAGAA chrI:2338124-2338204 16 7.49e-04 CACTGGTTTT TAATTGAT TAACTTTTTC chrV:18993672-18993752 56 7.49e-04 ttctctcatt taattgat ttttctgcaa chrI:626041-626121 57 7.69e-04 AATTACAAAA AAATCGAC AAGTACTGAT chrI:11385510-11385590 44 8.63e-04 TTTGAGGAAA TTATTGAT TTTTTGATGA chrV:19121253-19121333 47 8.63e-04 TTTTGGGAAT TTATTGAT TTTTTTGGGA chrX:16959792-16959872 32 8.63e-04 CGTATAATTA TTATTGAT CCCCCCGTTT chrI:692456-692536 32 8.63e-04 AATCAGTAAT TTATTGAT TTCTTCGGCT chrV:18940974-18941054 54 8.63e-04 TGAAGGGAAA TTATTGAT TTTTCAAGAA chrIV:991819-991899 60 8.63e-04 TTTGAGAAAA TTGTCGAT TTTTCCACAA chrIII:2419689-2419769 60 8.63e-04 CAGGTGAGAA ttattgat tttattgatt chrV:19902024-19902104 68 8.63e-04 tttcggaaat ttattgat ttttt chrV:19635651-19635731 54 8.63e-04 ttctggaaac ttattgat ttttctggaa chrI:3375823-3375903 57 8.63e-04 TAAAGCTAGG TTATTGAT TTATCGTTAA chrV:19909569-19909649 40 8.63e-04 TTATGGAAAT TTATTGAT TTTTCTGGAA chrV:19904946-19905026 14 8.63e-04 ttctggaaat ttattgat tttctggaaa chrI:1488242-1488322 11 8.63e-04 ATCAATAAAA TTATTGAT TTTCCGCCGG chrV:19630119-19630199 10 8.81e-04 TTTTGAGAA AGATCGAT TTTTCGGAAA chrV:31461-31541 13 9.57e-04 CTCGAAGCGA AAAGCGAT CGTTTCGACA chrI:1815559-1815639 41 9.57e-04 AGTTCTGAGA AAATCGGT AAATTCCCAG chrIII:1965335-1965415 36 9.95e-04 ttcccggaaa ttatcgac ttttccggaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:13793794-13793874 3.8e-05 72_[+2] chrII:2901359-2901439 3.8e-05 65_[+2]_7 chrX:183624-183704 3.8e-05 69_[+2]_3 chrIV:1740819-1740899 3.8e-05 4_[+2]_68 chrIV:15453556-15453636 3.8e-05 39_[+2]_33 chrIII:3242532-3242612 3.8e-05 32_[+2]_40 chrI:11533054-11533134 3.8e-05 72_[+2] chrI:1816800-1816880 3.8e-05 5_[+2]_67 chrIII:11280079-11280159 3.8e-05 20_[+2]_52 chrI:13806477-13806557 3.8e-05 34_[+2]_38 chrV:19010580-19010660 3.8e-05 24_[+2]_48 chrIII:1085162-1085242 3.8e-05 10_[+2]_62 chrI:12759817-12759897 3.8e-05 29_[+2]_43 chrII:724179-724259 3.8e-05 4_[+2]_68 chrIII:1807677-1807757 3.8e-05 42_[+2]_30 chrII:3064145-3064225 3.8e-05 48_[+2]_24 chrI:2937068-2937148 3.8e-05 5_[+2]_67 chrV:20105185-20105265 3.8e-05 62_[+2]_10 chrI:1987503-1987583 3.8e-05 58_[+2]_14 chrV:43230-43310 3.8e-05 66_[+2]_6 chrI:1643233-1643313 3.8e-05 44_[+2]_28 chrIV:2313894-2313974 3.8e-05 21_[+2]_51 chrIII:1834066-1834146 3.8e-05 33_[+2]_39 chrIII:1578673-1578753 3.8e-05 65_[+2]_7 chrI:1487516-1487596 3.8e-05 28_[+2]_44 chrV:19099612-19099692 3.8e-05 33_[+2]_39 chrIII:2098346-2098426 3.8e-05 1_[+2]_71 chrII:13316238-13316318 3.8e-05 30_[+2]_42 chrIII:2995465-2995545 3.8e-05 71_[+2]_1 chrII:3063563-3063643 3.8e-05 28_[+2]_44 chrII:13315797-13315877 3.8e-05 45_[+2]_27 chrV:19026923-19027003 3.8e-05 45_[+2]_27 chrIII:1807441-1807521 3.8e-05 14_[+2]_58 chrI:11533774-11533854 3.8e-05 19_[+2]_53 chrIV:999849-999929 3.8e-05 22_[+2]_50 chrII:12301404-12301484 3.8e-05 5_[+2]_67 chrV:19027523-19027603 3.8e-05 50_[+2]_22 chrIII:11615037-11615117 3.8e-05 59_[+2]_13 chrIII:11614447-11614527 3.8e-05 44_[+2]_28 chrIII:1879061-1879141 3.8e-05 59_[+2]_13 chrI:11486635-11486715 3.8e-05 5_[+2]_67 chrIII:1892315-1892395 3.8e-05 48_[+2]_24 chrIII:1580305-1580385 3.8e-05 37_[+2]_35 chrV:19907539-19907619 3.8e-05 47_[+2]_25 chrIII:2837468-2837548 3.8e-05 1_[+2]_71 chrIII:1583661-1583741 3.8e-05 48_[+2]_24 chrIV:1435330-1435410 3.8e-05 3_[+2]_69 chrIV:1000590-1000670 3.8e-05 65_[+2]_7 chrIII:2283605-2283685 3.8e-05 12_[+2]_60 chrIII:2837217-2837297 3.8e-05 43_[+2]_29 chrIII:2836876-2836956 3.8e-05 44_[+2]_28 chrIII:9538941-9539021 7.6e-05 37_[+2]_35 chrI:11388935-11389015 7.6e-05 24_[+2]_48 chrIII:2112711-2112791 7.6e-05 65_[+2]_7 chrI:11487312-11487392 7.6e-05 9_[+2]_63 chrII:12255698-12255778 7.6e-05 66_[+2]_6 chrI:354955-355035 7.6e-05 51_[+2]_21 chrII:13417614-13417694 0.00011 47_[+2]_25 chrIV:1408320-1408400 0.00011 63_[+2]_9 chrIV:1727709-1727789 0.00015 42_[+2]_30 chrI:14699154-14699234 0.00015 17_[+2]_55 chrI:2380734-2380814 0.00015 61_[+2]_11 chrII:12394250-12394330 0.00015 5_[+2]_67 chrI:647560-647640 0.00015 41_[+2]_31 chrIII:11733108-11733188 0.00015 15_[+2]_57 chrI:625261-625341 0.00015 45_[+2]_27 chrI:113053-113133 0.00015 72_[+2] chrI:11526066-11526146 0.00015 62_[+2]_10 chrIII:2961141-2961221 0.00015 55_[+2]_17 chrI:651585-651665 0.00015 66_[+2]_6 chrI:2334883-2334963 0.00015 55_[+2]_17 chrIV:1004878-1004958 0.00015 68_[+2]_4 chrI:697829-697909 0.00015 71_[+2]_1 chrIII:2282408-2282488 0.00015 48_[+2]_24 chrII:13414266-13414346 0.00015 61_[+2]_11 chrIII:3170683-3170763 0.00015 51_[+2]_21 chrIII:2960935-2961015 0.00015 58_[+2]_14 chrIII:2014072-2014152 0.00015 9_[+2]_63 chrI:13805319-13805399 0.00015 72_[+2] chrI:649963-650043 0.00015 21_[+2]_51 chrIV:848989-849069 0.00015 66_[+2]_6 chrIII:2014271-2014351 0.00015 58_[+2]_14 chrI:11384765-11384845 0.00015 8_[+2]_64 chrV:18984846-18984926 0.00015 58_[+2]_14 chrI:12214357-12214437 0.00015 65_[+2]_7 chrV:19112718-19112798 0.00015 19_[+2]_53 chrIII:12411203-12411283 0.00015 [+2]_72 chrV:19113790-19113870 0.00015 15_[+2]_57 chrIII:1955686-1955766 0.00015 13_[+2]_59 chrI:11486072-11486152 0.00015 18_[+2]_54 chrIV:16643932-16644012 0.00015 70_[+2]_2 chrIV:1443637-1443717 0.00015 56_[+2]_16 chrIII:2994141-2994221 0.00015 5_[+2]_67 chrI:649294-649374 0.00015 47_[+2]_25 chrIV:983733-983813 0.00015 61_[+2]_11 chrIII:2478794-2478874 0.00023 37_[+2]_35 chrI:627938-628018 0.00023 26_[+2]_46 chrII:7885007-7885087 0.00023 30_[+2]_42 chrII:12036662-12036742 0.00023 15_[+2]_57 chrV:19073394-19073474 0.00023 20_[+2]_52 chrIV:977963-978043 0.00023 17_[+2]_55 chrI:11488169-11488249 0.00023 6_[+2]_66 chrII:3070295-3070375 0.00023 70_[+2]_2 chrI:1448996-1449076 0.00023 69_[+2]_3 chrIII:1584462-1584542 0.00023 40_[+2]_32 chrIII:2962002-2962082 0.00023 25_[+2]_47 chrV:19100321-19100401 0.00023 36_[+2]_36 chrII:614888-614968 0.00023 54_[+2]_18 chrI:627737-627817 0.00023 37_[+2]_35 chrI:1816567-1816647 0.00023 10_[+2]_62 chrV:19101757-19101837 0.00023 8_[+2]_64 chrIV:978357-978437 0.00023 55_[+2]_17 chrIV:1740608-1740688 0.00023 15_[+2]_57 chrI:11532855-11532935 0.00023 5_[+2]_67 chrIII:1876444-1876524 0.00023 39_[+2]_33 chrI:96152-96232 0.00023 42_[+2]_30 chrV:19906161-19906241 0.00023 10_[+2]_62 chrI:11377410-11377490 0.00023 31_[+2]_41 chrIV:2236120-2236200 0.00023 5_[+2]_67 chrII:3315067-3315147 0.00023 10_[+2]_62 chrIII:2112914-2112994 0.0004 11_[+2]_61 chrV:19087603-19087683 0.0004 4_[+2]_68 chrIII:10861462-10861542 0.0004 53_[+2]_19 chrI:353358-353438 0.0004 11_[+2]_61 chrV:20457347-20457427 0.0004 32_[+2]_40 chrII:4256679-4256759 0.0004 49_[+2]_23 chrIII:2780480-2780560 0.0004 71_[+2]_1 chrI:1489489-1489569 0.0004 11_[+2]_61 chrI:2365022-2365102 0.00058 23_[+2]_49 chrI:2338124-2338204 0.00075 15_[+2]_57 chrV:18993672-18993752 0.00075 55_[+2]_17 chrI:626041-626121 0.00077 56_[+2]_16 chrI:11385510-11385590 0.00086 43_[+2]_29 chrV:19121253-19121333 0.00086 46_[+2]_26 chrX:16959792-16959872 0.00086 31_[+2]_41 chrI:692456-692536 0.00086 31_[+2]_41 chrV:18940974-18941054 0.00086 53_[+2]_19 chrIV:991819-991899 0.00086 59_[+2]_13 chrIII:2419689-2419769 0.00086 59_[+2]_13 chrV:19902024-19902104 0.00086 67_[+2]_5 chrV:19635651-19635731 0.00086 53_[+2]_19 chrI:3375823-3375903 0.00086 56_[+2]_16 chrV:19909569-19909649 0.00086 39_[+2]_33 chrV:19904946-19905026 0.00086 13_[+2]_59 chrI:1488242-1488322 0.00086 10_[+2]_62 chrV:19630119-19630199 0.00088 9_[+2]_63 chrV:31461-31541 0.00096 12_[+2]_60 chrI:1815559-1815639 0.00096 40_[+2]_32 chrIII:1965335-1965415 0.001 35_[+2]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WWATCGAT width=8 seqs=149 chrI:13793794-13793874 ( 73) AAATCGAT 1 chrII:2901359-2901439 ( 66) AAATCGAT 1 chrX:183624-183704 ( 70) AAATCGAT 1 chrIV:1740819-1740899 ( 5) AAATCGAT 1 chrIV:15453556-15453636 ( 40) AAATCGAT 1 chrIII:3242532-3242612 ( 33) AAATCGAT 1 chrI:11533054-11533134 ( 73) AAATCGAT 1 chrI:1816800-1816880 ( 6) AAATCGAT 1 chrIII:11280079-11280159 ( 21) AAATCGAT 1 chrI:13806477-13806557 ( 35) AAATCGAT 1 chrV:19010580-19010660 ( 25) AAATCGAT 1 chrIII:1085162-1085242 ( 11) AAATCGAT 1 chrI:12759817-12759897 ( 30) AAATCGAT 1 chrII:724179-724259 ( 5) AAATCGAT 1 chrIII:1807677-1807757 ( 43) AAATCGAT 1 chrII:3064145-3064225 ( 49) AAATCGAT 1 chrI:2937068-2937148 ( 6) AAATCGAT 1 chrV:20105185-20105265 ( 63) AAATCGAT 1 chrI:1987503-1987583 ( 59) AAATCGAT 1 chrV:43230-43310 ( 67) AAATCGAT 1 chrI:1643233-1643313 ( 45) AAATCGAT 1 chrIV:2313894-2313974 ( 22) AAATCGAT 1 chrIII:1834066-1834146 ( 34) AAATCGAT 1 chrIII:1578673-1578753 ( 66) AAATCGAT 1 chrI:1487516-1487596 ( 29) AAATCGAT 1 chrV:19099612-19099692 ( 34) AAATCGAT 1 chrIII:2098346-2098426 ( 2) AAATCGAT 1 chrII:13316238-13316318 ( 31) AAATCGAT 1 chrIII:2995465-2995545 ( 72) AAATCGAT 1 chrII:3063563-3063643 ( 29) AAATCGAT 1 chrII:13315797-13315877 ( 46) AAATCGAT 1 chrV:19026923-19027003 ( 46) AAATCGAT 1 chrIII:1807441-1807521 ( 15) AAATCGAT 1 chrI:11533774-11533854 ( 20) AAATCGAT 1 chrIV:999849-999929 ( 23) AAATCGAT 1 chrII:12301404-12301484 ( 6) AAATCGAT 1 chrV:19027523-19027603 ( 51) AAATCGAT 1 chrIII:11615037-11615117 ( 60) AAATCGAT 1 chrIII:11614447-11614527 ( 45) AAATCGAT 1 chrIII:1879061-1879141 ( 60) AAATCGAT 1 chrI:11486635-11486715 ( 6) AAATCGAT 1 chrIII:1892315-1892395 ( 49) AAATCGAT 1 chrIII:1580305-1580385 ( 38) AAATCGAT 1 chrV:19907539-19907619 ( 48) AAATCGAT 1 chrIII:2837468-2837548 ( 2) AAATCGAT 1 chrIII:1583661-1583741 ( 49) AAATCGAT 1 chrIV:1435330-1435410 ( 4) AAATCGAT 1 chrIV:1000590-1000670 ( 66) AAATCGAT 1 chrIII:2283605-2283685 ( 13) AAATCGAT 1 chrIII:2837217-2837297 ( 44) AAATCGAT 1 chrIII:2836876-2836956 ( 45) AAATCGAT 1 chrIII:9538941-9539021 ( 38) ATATCGAT 1 chrI:11388935-11389015 ( 25) ATATCGAT 1 chrIII:2112711-2112791 ( 66) ATATCGAT 1 chrI:11487312-11487392 ( 10) ATATCGAT 1 chrII:12255698-12255778 ( 67) ATATCGAT 1 chrI:354955-355035 ( 52) ATATCGAT 1 chrII:13417614-13417694 ( 48) TAATCGAT 1 chrIV:1408320-1408400 ( 64) TAATCGAT 1 chrIV:1727709-1727789 ( 43) TTATCGAT 1 chrI:14699154-14699234 ( 18) TTATCGAT 1 chrI:2380734-2380814 ( 62) TTATCGAT 1 chrII:12394250-12394330 ( 6) TTATCGAT 1 chrI:647560-647640 ( 42) TTATCGAT 1 chrIII:11733108-11733188 ( 16) TTATCGAT 1 chrI:625261-625341 ( 46) TTATCGAT 1 chrI:113053-113133 ( 73) TTATCGAT 1 chrI:11526066-11526146 ( 63) TTATCGAT 1 chrIII:2961141-2961221 ( 56) TTATCGAT 1 chrI:651585-651665 ( 67) TTATCGAT 1 chrI:2334883-2334963 ( 56) TTATCGAT 1 chrIV:1004878-1004958 ( 69) TTATCGAT 1 chrI:697829-697909 ( 72) TTATCGAT 1 chrIII:2282408-2282488 ( 49) TTATCGAT 1 chrII:13414266-13414346 ( 62) TTATCGAT 1 chrIII:3170683-3170763 ( 52) TTATCGAT 1 chrIII:2960935-2961015 ( 59) TTATCGAT 1 chrIII:2014072-2014152 ( 10) TTATCGAT 1 chrI:13805319-13805399 ( 73) TTATCGAT 1 chrI:649963-650043 ( 22) TTATCGAT 1 chrIV:848989-849069 ( 67) TTATCGAT 1 chrIII:2014271-2014351 ( 59) TTATCGAT 1 chrI:11384765-11384845 ( 9) TTATCGAT 1 chrV:18984846-18984926 ( 59) TTATCGAT 1 chrI:12214357-12214437 ( 66) TTATCGAT 1 chrV:19112718-19112798 ( 20) TTATCGAT 1 chrIII:12411203-12411283 ( 1) TTATCGAT 1 chrV:19113790-19113870 ( 16) TTATCGAT 1 chrIII:1955686-1955766 ( 14) TTATCGAT 1 chrI:11486072-11486152 ( 19) TTATCGAT 1 chrIV:16643932-16644012 ( 71) TTATCGAT 1 chrIV:1443637-1443717 ( 57) TTATCGAT 1 chrIII:2994141-2994221 ( 6) TTATCGAT 1 chrI:649294-649374 ( 48) TTATCGAT 1 chrIV:983733-983813 ( 62) TTATCGAT 1 chrIII:2478794-2478874 ( 38) AAATCAAT 1 chrI:627938-628018 ( 27) AAATCAAT 1 chrII:7885007-7885087 ( 31) AAATCAAT 1 chrII:12036662-12036742 ( 16) AAATCAAT 1 chrV:19073394-19073474 ( 21) AAATCAAT 1 chrIV:977963-978043 ( 18) AAATCAAT 1 chrI:11488169-11488249 ( 7) AAATCAAT 1 chrII:3070295-3070375 ( 71) AAATCAAT 1 chrI:1448996-1449076 ( 70) AAATCAAT 1 chrIII:1584462-1584542 ( 41) AAATCAAT 1 chrIII:2962002-2962082 ( 26) AAATCAAT 1 chrV:19100321-19100401 ( 37) AAATCAAT 1 chrII:614888-614968 ( 55) AAATCAAT 1 chrI:627737-627817 ( 38) AAATCAAT 1 chrI:1816567-1816647 ( 11) AAATCAAT 1 chrV:19101757-19101837 ( 9) AAATCAAT 1 chrIV:978357-978437 ( 56) AAATCAAT 1 chrIV:1740608-1740688 ( 16) AAATCAAT 1 chrI:11532855-11532935 ( 6) AAATCAAT 1 chrIII:1876444-1876524 ( 40) AAATCAAT 1 chrI:96152-96232 ( 43) AAATCAAT 1 chrV:19906161-19906241 ( 11) AAATCAAT 1 chrI:11377410-11377490 ( 32) AAATCAAT 1 chrIV:2236120-2236200 ( 6) AAATCAAT 1 chrII:3315067-3315147 ( 11) AAATCAAT 1 chrIII:2112914-2112994 ( 12) ATATCAAT 1 chrV:19087603-19087683 ( 5) AAATTGAT 1 chrIII:10861462-10861542 ( 54) AAGTCGAT 1 chrI:353358-353438 ( 12) AAATTGAT 1 chrV:20457347-20457427 ( 33) AAGTCGAT 1 chrII:4256679-4256759 ( 50) AAGTCGAT 1 chrIII:2780480-2780560 ( 72) AAGTCGAT 1 chrI:1489489-1489569 ( 12) AAATTGAT 1 chrI:2365022-2365102 ( 24) ATATTGAT 1 chrI:2338124-2338204 ( 16) TAATTGAT 1 chrV:18993672-18993752 ( 56) TAATTGAT 1 chrI:626041-626121 ( 57) AAATCGAC 1 chrI:11385510-11385590 ( 44) TTATTGAT 1 chrV:19121253-19121333 ( 47) TTATTGAT 1 chrX:16959792-16959872 ( 32) TTATTGAT 1 chrI:692456-692536 ( 32) TTATTGAT 1 chrV:18940974-18941054 ( 54) TTATTGAT 1 chrIV:991819-991899 ( 60) TTGTCGAT 1 chrIII:2419689-2419769 ( 60) TTATTGAT 1 chrV:19902024-19902104 ( 68) TTATTGAT 1 chrV:19635651-19635731 ( 54) TTATTGAT 1 chrI:3375823-3375903 ( 57) TTATTGAT 1 chrV:19909569-19909649 ( 40) TTATTGAT 1 chrV:19904946-19905026 ( 14) TTATTGAT 1 chrI:1488242-1488322 ( 11) TTATTGAT 1 chrV:19630119-19630199 ( 10) AGATCGAT 1 chrV:31461-31541 ( 13) AAAGCGAT 1 chrI:1815559-1815639 ( 41) AAATCGGT 1 chrIII:1965335-1965415 ( 36) TTATCGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.09854 E= 3.5e-112 93 -1386 -1386 12 85 -1386 -460 22 153 -1386 -228 -1386 -1386 -1386 -460 157 -1386 238 -1386 -147 -94 -1386 234 -1386 157 -1386 -460 -1386 -1386 -365 -1386 156 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 149 E= 3.5e-112 0.637584 0.000000 0.000000 0.362416 0.604027 0.000000 0.006711 0.389262 0.966443 0.000000 0.033557 0.000000 0.000000 0.000000 0.006711 0.993289 0.000000 0.879195 0.000000 0.120805 0.174497 0.000000 0.825503 0.000000 0.993289 0.000000 0.006711 0.000000 0.000000 0.013423 0.000000 0.986577 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWATCGAT MEME-2 regular expression -------------------------------------------------------------------------------- [AT][AT]ATCGAT -------------------------------------------------------------------------------- Time 10.04 secs. ******************************************************************************** ******************************************************************************** MOTIF TYGATTTT MEME-3 width = 8 sites = 67 llr = 587 E-value = 1.3e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C 16:::::: probability G ::a::::: matrix T 94::aaaa bits 2.6 2.4 * 2.1 * 1.8 * Relative 1.6 ** *** Entropy 1.3 * ****** (12.6 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TCGATTTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrIV:1727709-1727789 67 3.82e-05 CTTTAAATTA TCGATTTT TTCACA chrII:2901359-2901439 9 3.82e-05 GTTAGACC TCGATTTT CGCGGAAAAA chrIII:11733108-11733188 1 3.82e-05 . TCGATTTT TCGGAATTTA chrIII:3242532-3242612 56 3.82e-05 CCGTAAATTA TCGATTTT ATTCGCTAAA chrIII:2961141-2961221 39 3.82e-05 tcgatttttt tcgatttt tctgacaatt chrI:11388935-11389015 66 3.82e-05 CCAGAAATCA TCGATTTT CTGGGAA chrI:651585-651665 51 3.82e-05 CCGATAATTA TCGATTTT TCGGATAATT chrI:2334883-2334963 25 3.82e-05 TTGAAAATTA TCGATTTT TTGTAAGTTA chrI:627737-627817 51 3.82e-05 TCAATAGTTT TCGATTTT TTTTGGAAAA chrIV:1004878-1004958 53 3.82e-05 TATCGATTTT TCGATTTT CGGTAAATTT chrIII:2112711-2112791 10 3.82e-05 ACCAAATTA TCGATTTT TTGAAGGAAT chrI:697829-697909 53 3.82e-05 GAGAAAATTA TCGATTTT TTTTGAGAAA chrIV:991819-991899 44 3.82e-05 CAGAAAACTA TCGATTTT TGAGAAAATT chrI:1643233-1643313 28 3.82e-05 TCGATAATTT TCGATTTT CAGGCAGAAA chrII:13414266-13414346 14 3.82e-05 tcgccaatta tcgatttt tttgaaatcg chrIII:2960935-2961015 42 3.82e-05 tcgatttttt tcgatttt tcggaacatt chrI:649963-650043 63 3.82e-05 CCGGTAATTA TCGATTTT TTCCGATAAT chrII:3063563-3063643 4 3.82e-05 TTA TCGATTTT TCACAATTTT chrIII:2014271-2014351 5 3.82e-05 atta tcgatttt ccttaaaatt chrV:18984846-18984926 22 3.82e-05 tgaaaacgta tcgatttt tctaaaaatt chrIV:1408320-1408400 47 3.82e-05 cggaatttta tcgatttt tctggaaatt chrI:11487312-11487392 70 3.82e-05 CAAGAAATTA TCGATTTT TCC chrV:19112718-19112798 63 3.82e-05 tggaatttta tcgatttt tctgaaaatt chrII:12255698-12255778 3 3.82e-05 TA TCGATTTT TACAGATTTT chrIII:12411203-12411283 67 3.82e-05 AATGAAATTA TCGATTTT CGGCTG chrV:19113790-19113870 58 3.82e-05 ctgaaattta tcgatttt tctggaattt chrIII:1955686-1955766 58 3.82e-05 CCAGAAATTA TCGATTTT TTCGGAAATT chrI:354955-355035 17 3.82e-05 ctggaattta tcgatttt tctggaattt chrI:11486072-11486152 41 3.82e-05 cgagaaattt tcgatttt ttatgaaatt chrIV:16643932-16644012 19 3.82e-05 cgacaaatta tcgatttt tcgaaaattc chrIV:1443637-1443717 21 3.82e-05 tggaatttta tcgatttt ttgaaacttt chrI:649294-649374 69 3.82e-05 ttgaaattta tcgatttt ccct chrIII:2112914-2112994 69 1.14e-04 tcggaaatta ttgatttt TTTA chrII:12394250-12394330 28 1.14e-04 ACAAAATTTA TTGATTTT TTTGTCTAAT chrII:3070295-3070375 5 1.14e-04 AATA TTGATTTT TTGAATTTTT chrI:11526066-11526146 5 1.14e-04 ATTA TTGATTTT TCGTCAGAGT chrI:13806477-13806557 60 1.14e-04 ATGGAATTTA TTGATTTT CAACTAAAAA chrV:19010580-19010660 7 1.14e-04 GATTTA TTGATTTT TGCCGCCGGA chrI:11385510-11385590 27 1.14e-04 GATGAAGCTA TTGATTTT TTGAGGAAAT chrI:1052009-1052089 34 1.14e-04 ATCGATTTTA TTGATTTT TTATAGAGCG chrV:19121253-19121333 70 1.14e-04 TGGGAATTTA TTGATTTT TCT chrV:18940974-18941054 15 1.14e-04 AGGGAAATTA TTGATTTT TCAAAAATGA chrI:2365022-2365102 67 1.14e-04 TAGGACTTTA TTGATTTT TCAGTG chrIII:2282408-2282488 71 1.14e-04 cgcggaatta ttgatttt ct chrI:1487516-1487596 5 1.14e-04 ATTA TTGATTTT CCGCCGGCAA chrV:19902024-19902104 11 1.14e-04 tggaaattta ttgatttt tctggaaatt chrIII:2014072-2014152 32 1.14e-04 cgtagaagta ttgatttt tccttaaaat chrIV:848989-849069 50 1.14e-04 tgcaaaatta ttgatttt tcttccaaat chrV:19635651-19635731 17 1.14e-04 tggaaattta ttgatttt tctggaaatt chrIII:1058211-1058291 36 1.14e-04 ATAATCCACG TTGATTTT TCACAGAATT chrI:12214357-12214437 45 1.14e-04 CGAAAATTTA TTGATTTT TCGATAAAAA chrI:3375823-3375903 19 1.14e-04 TGCGATATCG TTGATTTT TTTCTCAAAT chrIII:204086-204166 1 1.14e-04 . TTGATTTT TGGTACGAAA chrV:19909569-19909649 63 1.14e-04 TGGAAGTTTA TTGATTTT TATGGAAATT chrI:1489489-1489569 27 1.14e-04 GATAAAAGTA TTGATTTT CTATCGGCAA chrV:19906161-19906241 71 1.14e-04 ctgaaattta ttgatttt tc chrIII:1580305-1580385 23 1.14e-04 TATCGATTTA TTGATTTT TTCAGAAAAA chrIII:1583661-1583741 24 1.14e-04 CCCGGATTTA TTGATTTT CCGGATTCTT chrIV:983733-983813 7 1.14e-04 gattta ttgatttt tttGGCGGCG chrI:625261-625341 58 1.33e-04 ATCGATTTTT CCGATTTT TTCCAAAAAA chrI:13804196-13804276 21 1.33e-04 ttgaaaattg ccgatttt acacaaaatt chrIV:1437763-1437843 5 1.53e-04 ttca tcgacttt tcgggaattt chrIII:1965335-1965415 19 1.53e-04 ccggatgtta tcgacttt tcccggaaat chrI:626041-626121 70 1.91e-04 TCGACAAGTA CTGATTTT TTC chrI:692456-692536 7 1.91e-04 AAATTA CTGATTTT CTGTTAAAAT chrIII:6973893-6973973 31 2.30e-04 CGGCTCCCCT TCCATTTT CTAAGTAATC chrII:13641474-13641554 17 2.30e-04 TTCCCCTCTT TCCATTTT CCCGCATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1727709-1727789 3.8e-05 66_[+3]_6 chrII:2901359-2901439 3.8e-05 8_[+3]_64 chrIII:11733108-11733188 3.8e-05 [+3]_72 chrIII:3242532-3242612 3.8e-05 55_[+3]_17 chrIII:2961141-2961221 3.8e-05 38_[+3]_34 chrI:11388935-11389015 3.8e-05 65_[+3]_7 chrI:651585-651665 3.8e-05 50_[+3]_22 chrI:2334883-2334963 3.8e-05 24_[+3]_48 chrI:627737-627817 3.8e-05 50_[+3]_22 chrIV:1004878-1004958 3.8e-05 52_[+3]_20 chrIII:2112711-2112791 3.8e-05 9_[+3]_63 chrI:697829-697909 3.8e-05 52_[+3]_20 chrIV:991819-991899 3.8e-05 43_[+3]_29 chrI:1643233-1643313 3.8e-05 27_[+3]_45 chrII:13414266-13414346 3.8e-05 13_[+3]_59 chrIII:2960935-2961015 3.8e-05 41_[+3]_31 chrI:649963-650043 3.8e-05 62_[+3]_10 chrII:3063563-3063643 3.8e-05 3_[+3]_69 chrIII:2014271-2014351 3.8e-05 4_[+3]_68 chrV:18984846-18984926 3.8e-05 21_[+3]_51 chrIV:1408320-1408400 3.8e-05 46_[+3]_26 chrI:11487312-11487392 3.8e-05 69_[+3]_3 chrV:19112718-19112798 3.8e-05 62_[+3]_10 chrII:12255698-12255778 3.8e-05 2_[+3]_70 chrIII:12411203-12411283 3.8e-05 66_[+3]_6 chrV:19113790-19113870 3.8e-05 57_[+3]_15 chrIII:1955686-1955766 3.8e-05 57_[+3]_15 chrI:354955-355035 3.8e-05 16_[+3]_56 chrI:11486072-11486152 3.8e-05 40_[+3]_32 chrIV:16643932-16644012 3.8e-05 18_[+3]_54 chrIV:1443637-1443717 3.8e-05 20_[+3]_52 chrI:649294-649374 3.8e-05 68_[+3]_4 chrIII:2112914-2112994 0.00011 68_[+3]_4 chrII:12394250-12394330 0.00011 27_[+3]_45 chrII:3070295-3070375 0.00011 4_[+3]_68 chrI:11526066-11526146 0.00011 4_[+3]_68 chrI:13806477-13806557 0.00011 59_[+3]_13 chrV:19010580-19010660 0.00011 6_[+3]_66 chrI:11385510-11385590 0.00011 26_[+3]_46 chrI:1052009-1052089 0.00011 33_[+3]_39 chrV:19121253-19121333 0.00011 69_[+3]_3 chrV:18940974-18941054 0.00011 14_[+3]_58 chrI:2365022-2365102 0.00011 66_[+3]_6 chrIII:2282408-2282488 0.00011 70_[+3]_2 chrI:1487516-1487596 0.00011 4_[+3]_68 chrV:19902024-19902104 0.00011 10_[+3]_62 chrIII:2014072-2014152 0.00011 31_[+3]_41 chrIV:848989-849069 0.00011 49_[+3]_23 chrV:19635651-19635731 0.00011 16_[+3]_56 chrIII:1058211-1058291 0.00011 35_[+3]_37 chrI:12214357-12214437 0.00011 44_[+3]_28 chrI:3375823-3375903 0.00011 18_[+3]_54 chrIII:204086-204166 0.00011 [+3]_72 chrV:19909569-19909649 0.00011 62_[+3]_10 chrI:1489489-1489569 0.00011 26_[+3]_46 chrV:19906161-19906241 0.00011 70_[+3]_2 chrIII:1580305-1580385 0.00011 22_[+3]_50 chrIII:1583661-1583741 0.00011 23_[+3]_49 chrIV:983733-983813 0.00011 6_[+3]_66 chrI:625261-625341 0.00013 57_[+3]_15 chrI:13804196-13804276 0.00013 20_[+3]_52 chrIV:1437763-1437843 0.00015 4_[+3]_68 chrIII:1965335-1965415 0.00015 18_[+3]_54 chrI:626041-626121 0.00019 69_[+3]_3 chrI:692456-692536 0.00019 6_[+3]_66 chrIII:6973893-6973973 0.00023 30_[+3]_42 chrII:13641474-13641554 0.00023 16_[+3]_56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TYGATTTT width=8 seqs=67 chrIV:1727709-1727789 ( 67) TCGATTTT 1 chrII:2901359-2901439 ( 9) TCGATTTT 1 chrIII:11733108-11733188 ( 1) TCGATTTT 1 chrIII:3242532-3242612 ( 56) TCGATTTT 1 chrIII:2961141-2961221 ( 39) TCGATTTT 1 chrI:11388935-11389015 ( 66) TCGATTTT 1 chrI:651585-651665 ( 51) TCGATTTT 1 chrI:2334883-2334963 ( 25) TCGATTTT 1 chrI:627737-627817 ( 51) TCGATTTT 1 chrIV:1004878-1004958 ( 53) TCGATTTT 1 chrIII:2112711-2112791 ( 10) TCGATTTT 1 chrI:697829-697909 ( 53) TCGATTTT 1 chrIV:991819-991899 ( 44) TCGATTTT 1 chrI:1643233-1643313 ( 28) TCGATTTT 1 chrII:13414266-13414346 ( 14) TCGATTTT 1 chrIII:2960935-2961015 ( 42) TCGATTTT 1 chrI:649963-650043 ( 63) TCGATTTT 1 chrII:3063563-3063643 ( 4) TCGATTTT 1 chrIII:2014271-2014351 ( 5) TCGATTTT 1 chrV:18984846-18984926 ( 22) TCGATTTT 1 chrIV:1408320-1408400 ( 47) TCGATTTT 1 chrI:11487312-11487392 ( 70) TCGATTTT 1 chrV:19112718-19112798 ( 63) TCGATTTT 1 chrII:12255698-12255778 ( 3) TCGATTTT 1 chrIII:12411203-12411283 ( 67) TCGATTTT 1 chrV:19113790-19113870 ( 58) TCGATTTT 1 chrIII:1955686-1955766 ( 58) TCGATTTT 1 chrI:354955-355035 ( 17) TCGATTTT 1 chrI:11486072-11486152 ( 41) TCGATTTT 1 chrIV:16643932-16644012 ( 19) TCGATTTT 1 chrIV:1443637-1443717 ( 21) TCGATTTT 1 chrI:649294-649374 ( 69) TCGATTTT 1 chrIII:2112914-2112994 ( 69) TTGATTTT 1 chrII:12394250-12394330 ( 28) TTGATTTT 1 chrII:3070295-3070375 ( 5) TTGATTTT 1 chrI:11526066-11526146 ( 5) TTGATTTT 1 chrI:13806477-13806557 ( 60) TTGATTTT 1 chrV:19010580-19010660 ( 7) TTGATTTT 1 chrI:11385510-11385590 ( 27) TTGATTTT 1 chrI:1052009-1052089 ( 34) TTGATTTT 1 chrV:19121253-19121333 ( 70) TTGATTTT 1 chrV:18940974-18941054 ( 15) TTGATTTT 1 chrI:2365022-2365102 ( 67) TTGATTTT 1 chrIII:2282408-2282488 ( 71) TTGATTTT 1 chrI:1487516-1487596 ( 5) TTGATTTT 1 chrV:19902024-19902104 ( 11) TTGATTTT 1 chrIII:2014072-2014152 ( 32) TTGATTTT 1 chrIV:848989-849069 ( 50) TTGATTTT 1 chrV:19635651-19635731 ( 17) TTGATTTT 1 chrIII:1058211-1058291 ( 36) TTGATTTT 1 chrI:12214357-12214437 ( 45) TTGATTTT 1 chrI:3375823-3375903 ( 19) TTGATTTT 1 chrIII:204086-204166 ( 1) TTGATTTT 1 chrV:19909569-19909649 ( 63) TTGATTTT 1 chrI:1489489-1489569 ( 27) TTGATTTT 1 chrV:19906161-19906241 ( 71) TTGATTTT 1 chrIII:1580305-1580385 ( 23) TTGATTTT 1 chrIII:1583661-1583741 ( 24) TTGATTTT 1 chrIV:983733-983813 ( 7) TTGATTTT 1 chrI:625261-625341 ( 58) CCGATTTT 1 chrI:13804196-13804276 ( 21) CCGATTTT 1 chrIV:1437763-1437843 ( 5) TCGACTTT 1 chrIII:1965335-1965415 ( 19) TCGACTTT 1 chrI:626041-626121 ( 70) CTGATTTT 1 chrI:692456-692536 ( 7) CTGATTTT 1 chrIII:6973893-6973973 ( 31) TCCATTTT 1 chrII:13641474-13641554 ( 17) TCCATTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.86712 E= 1.3e-048 -1271 -150 -1271 149 -1271 175 -1271 37 -1271 -250 257 -1271 158 -1271 -1271 -1271 -1271 -250 -1271 154 -1271 -1271 -1271 158 -1271 -1271 -1271 158 -1271 -1271 -1271 158 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 67 E= 1.3e-048 0.000000 0.059701 0.000000 0.940299 0.000000 0.567164 0.000000 0.432836 0.000000 0.029851 0.970149 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.029851 0.000000 0.970149 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYGATTTT MEME-3 regular expression -------------------------------------------------------------------------------- T[CT]GATTTT -------------------------------------------------------------------------------- Time 13.09 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAATCRA MEME-4 width = 8 sites = 78 llr = 638 E-value = 6.3e-045 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 Description -------------------------------------------------------------------------------- Simplified A aaa91:49 pos.-specific C :::::a:: probability G ::::::61 matrix T :::19::: bits 2.6 * 2.4 * 2.1 * 1.8 * Relative 1.6 *** * Entropy 1.3 **** ** (11.8 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AAAATCGA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrI:2380734-2380814 16 3.82e-05 ATTTATATCA AAAATCGA GTTTTTCAGA chrI:625261-625341 73 3.82e-05 TTTTTCCAAA AAAATCGA chrIII:11280079-11280159 59 3.82e-05 TTATTTGCGG AAAATCGA TGAAAAATAA chrI:2338124-2338204 72 3.82e-05 ATCGTTAGAA AAAATCGA C chrII:724179-724259 43 3.82e-05 AATTTTAATT AAAATCGA CTATTTGCGT chrIII:1807677-1807757 4 3.82e-05 ctg aaaatcga taatttatcg chrV:19101757-19101837 47 3.82e-05 aatttccaga aaaatcga caaatttcca chrII:4256679-4256759 73 3.82e-05 CCATTTTTCA AAAATCGA chrIII:1834066-1834146 13 3.82e-05 atttttctga aaaatcga taattttctg chrV:19099612-19099692 51 3.82e-05 TAATTTTCAA AAAATCGA TAAATTTCCA chrII:13316238-13316318 22 3.82e-05 TGAGTTTGGA AAAATCGA AAAATCGATA chrIII:2995465-2995545 39 3.82e-05 ATTTTTTTCA AAAATCGA AAAATTATCG chrII:3063563-3063643 67 3.82e-05 TTTTCAACGA AAAATCGA TATTTT chrII:13315797-13315877 7 3.82e-05 TTTGGA AAAATCGA TAAATTTTGG chrV:19026923-19027003 5 3.82e-05 caga aaaatcga taaattttca chrIII:1807441-1807521 52 3.82e-05 attttatcgg aaaatcga taatttatcg chrI:11533774-11533854 57 3.82e-05 AATTTCCAAA AAAATCGA TACTTCTCCG chrII:12301404-12301484 25 3.82e-05 ATTTTTGGAA AAAATCGA AAAATCGATA chrV:19027523-19027603 11 3.82e-05 aaatttctga aaaatcga taaaatcctg chrIII:11614447-11614527 24 3.82e-05 AATATTTCCG AAAATCGA TAATTGTCAC chrIII:1892315-1892395 11 3.82e-05 AATTTCTCAG AAAATCGA AAATTGCTCG chrIII:2837468-2837548 60 3.82e-05 aatttccgga aAAATCGA TAATTTCTTG chrIV:1435330-1435410 61 3.82e-05 aatttcctga aaaatcga taaatttctg chrIII:2283605-2283685 53 3.82e-05 TTTCGCGAAA AAAATCGA TAATTTCGCG chrIII:2837217-2837297 62 3.82e-05 aatttccgga aaaatcga taatttctgg chrIII:2836876-2836956 6 3.82e-05 ccgga aaaatcga taatttccgg chrI:1488242-1488322 73 3.82e-05 GGCAATCAAA AAAATCGA chrIII:2478794-2478874 29 1.17e-04 aaatcgataa aaaatcaa taaatcaata chrV:19073394-19073474 42 1.17e-04 TTTTCTTGAA AAAATCAA TAATTTTTTG chrII:2901359-2901439 23 1.17e-04 TTTTCGCGGA AAAATCAA TTAGAAATCG chrX:183624-183704 49 1.17e-04 aaattccata aaaatcaa taaatttcca chrIV:977963-978043 57 1.17e-04 AATTTCCCAA AAAATCAA TAATTTCCCA chrIV:1740819-1740899 24 1.17e-04 aattttcaga aaaatcaa taaattccca chrI:11488169-11488249 52 1.17e-04 GGTCCCCGAA AAAATCAA TATTCTAGCC chrI:11526066-11526146 43 1.17e-04 CTGATAAAAA AAAATCAA TTTTTCACTA chrIII:3242532-3242612 21 1.17e-04 CGATTTTTTG AAAATCAA CAAAAAATCG chrI:1816800-1816880 43 1.17e-04 AAATTCTCAG AAAATCAA TAAATTTCCA chrIII:2962002-2962082 67 1.17e-04 AATTTCTCGA AAAATCAA TACAAT chrV:19100321-19100401 56 1.17e-04 AATTTTCAGA AAAATCAA TAAAAAAATT chrI:1815559-1815639 59 1.17e-04 AAATTCCCAG AAAATCAA AAAATTTAAA chrI:627737-627817 67 1.17e-04 TTTTTTGGAA AAAATCAA TAATTA chrI:1816567-1816647 67 1.17e-04 AAATTTTCAG AAAATCAA TAAATT chrI:2937068-2937148 25 1.17e-04 ATTTCCACCA AAAATCAA TAATTTCAAT chrII:13315998-13316078 26 1.17e-04 AATTTTCGGG AAAATCAA AAAAATTTGA chrI:1643233-1643313 70 1.17e-04 CAATTTCGGA AAAATCAA TAA chrIV:1740608-1740688 35 1.17e-04 AATTCTCAGA AAAATCAA TACATTCTCA chrIII:1578673-1578753 2 1.17e-04 A AAAATCAA TGGAAAATTA chrIII:2098346-2098426 40 1.17e-04 AATTTTCCGA AAAATCAA TAAAGCAAAA chrI:11532855-11532935 62 1.17e-04 AATTTTCACA AAAATCAA TAATTTTCAC chrIV:999849-999929 41 1.17e-04 ACTTTCAGGA AAAATCAA TAATTTGATA chrI:11486635-11486715 43 1.17e-04 AATTTCCAGA AAAATCAA TAAATTTCTT chrV:19907539-19907619 7 1.17e-04 tccaga aaaatcaa taaattcccg chrI:11377410-11377490 53 1.17e-04 ATTCTGTAAA AAAATCAA TAAAATTCTG chrIV:1000590-1000670 45 1.17e-04 CTTTTCCTGA AAAATCAA TAATTTGTCC chrI:647560-647640 24 1.35e-04 GCAATTTAAA AAAATCGG TAGTTGAAAT chrI:353358-353438 29 1.35e-04 taaattccag aaaatcgg taatttccgg chrII:2192458-2192538 55 1.35e-04 AAATCTCCGA AAAATCGG AAACAAAAAA chrII:13417614-13417694 37 1.35e-04 tttttttttg aaaatcgg caataatcga chrII:2758654-2758734 37 1.35e-04 TCTTTAGACC AAAATCGG ATTACTATTG chrV:20105185-20105265 51 1.35e-04 TAATCTTAAA AAAATCGG AAAAAAATCG chrI:12759817-12759897 73 1.74e-04 ATTTTATTCA AAAATCAG chrV:20104576-20104656 67 1.74e-04 GGTTTTTCGT AAAATCAG AAATTT chrI:692456-692536 20 1.74e-04 ATTTTCTGTT AAAATCAG TAATTTATTG chrI:13793794-13793874 14 2.50e-04 TTTCATTAAA AAATTCGA AAATTTTGAA chrI:626041-626121 16 2.50e-04 AATTTTAAAA AAAAACGA CAATTATTGA chrI:1448996-1449076 9 2.50e-04 TTTCAGAA AAATTCGA TAATTTTCAC chrIII:2013370-2013450 29 2.50e-04 AAATCACAAG AAAAACGA CACCTGGCGG chrX:5336172-5336252 16 2.50e-04 TCAATATTCG AAATTCGA AATTCAATAA chrI:1487516-1487596 60 2.50e-04 TTCATTCGAC AAAAACGA TTAGTTAACA chrIII:1058211-1058291 19 2.50e-04 AAATTCTGTA AAAAACGA TAATCCACGT chrIV:16643932-16644012 59 2.50e-04 attttttcga aaattcga gaaattatcg chrIII:2328782-2328862 7 4.07e-04 GACCAA AAATTCAA ATTCCCGCTG chrV:19633134-19633214 71 4.07e-04 TTTGAATAGA AAATTCAA TT chrIII:1879061-1879141 39 4.07e-04 attttctgaa aaaaacaa taattttctg chrIV:17329045-17329125 4 4.45e-04 GGC AAAAGCGA GACATCGTGT chrII:12805327-12805407 10 4.45e-04 AAAATGATG AAAATCGC CCTAAAATGC chrV:20457347-20457427 41 5.01e-04 AAAAGTCGAT AAAAACGG ACACCTCGAA chrIII:11615037-11615117 40 5.01e-04 ATTCTTCACA AAAACCGA TAATTTTCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:2380734-2380814 3.8e-05 15_[+4]_57 chrI:625261-625341 3.8e-05 72_[+4] chrIII:11280079-11280159 3.8e-05 58_[+4]_14 chrI:2338124-2338204 3.8e-05 71_[+4]_1 chrII:724179-724259 3.8e-05 42_[+4]_30 chrIII:1807677-1807757 3.8e-05 3_[+4]_69 chrV:19101757-19101837 3.8e-05 46_[+4]_26 chrII:4256679-4256759 3.8e-05 72_[+4] chrIII:1834066-1834146 3.8e-05 12_[+4]_60 chrV:19099612-19099692 3.8e-05 50_[+4]_22 chrII:13316238-13316318 3.8e-05 21_[+4]_51 chrIII:2995465-2995545 3.8e-05 38_[+4]_34 chrII:3063563-3063643 3.8e-05 66_[+4]_6 chrII:13315797-13315877 3.8e-05 6_[+4]_66 chrV:19026923-19027003 3.8e-05 4_[+4]_68 chrIII:1807441-1807521 3.8e-05 51_[+4]_21 chrI:11533774-11533854 3.8e-05 56_[+4]_16 chrII:12301404-12301484 3.8e-05 24_[+4]_48 chrV:19027523-19027603 3.8e-05 10_[+4]_62 chrIII:11614447-11614527 3.8e-05 23_[+4]_49 chrIII:1892315-1892395 3.8e-05 10_[+4]_62 chrIII:2837468-2837548 3.8e-05 59_[+4]_13 chrIV:1435330-1435410 3.8e-05 60_[+4]_12 chrIII:2283605-2283685 3.8e-05 52_[+4]_20 chrIII:2837217-2837297 3.8e-05 61_[+4]_11 chrIII:2836876-2836956 3.8e-05 5_[+4]_67 chrI:1488242-1488322 3.8e-05 72_[+4] chrIII:2478794-2478874 0.00012 28_[+4]_44 chrV:19073394-19073474 0.00012 41_[+4]_31 chrII:2901359-2901439 0.00012 22_[+4]_50 chrX:183624-183704 0.00012 48_[+4]_24 chrIV:977963-978043 0.00012 56_[+4]_16 chrIV:1740819-1740899 0.00012 23_[+4]_49 chrI:11488169-11488249 0.00012 51_[+4]_21 chrI:11526066-11526146 0.00012 42_[+4]_30 chrIII:3242532-3242612 0.00012 20_[+4]_52 chrI:1816800-1816880 0.00012 42_[+4]_30 chrIII:2962002-2962082 0.00012 66_[+4]_6 chrV:19100321-19100401 0.00012 55_[+4]_17 chrI:1815559-1815639 0.00012 58_[+4]_14 chrI:627737-627817 0.00012 66_[+4]_6 chrI:1816567-1816647 0.00012 66_[+4]_6 chrI:2937068-2937148 0.00012 24_[+4]_48 chrII:13315998-13316078 0.00012 25_[+4]_47 chrI:1643233-1643313 0.00012 69_[+4]_3 chrIV:1740608-1740688 0.00012 34_[+4]_38 chrIII:1578673-1578753 0.00012 1_[+4]_71 chrIII:2098346-2098426 0.00012 39_[+4]_33 chrI:11532855-11532935 0.00012 61_[+4]_11 chrIV:999849-999929 0.00012 40_[+4]_32 chrI:11486635-11486715 0.00012 42_[+4]_30 chrV:19907539-19907619 0.00012 6_[+4]_66 chrI:11377410-11377490 0.00012 52_[+4]_20 chrIV:1000590-1000670 0.00012 44_[+4]_28 chrI:647560-647640 0.00014 23_[+4]_49 chrI:353358-353438 0.00014 28_[+4]_44 chrII:2192458-2192538 0.00014 54_[+4]_18 chrII:13417614-13417694 0.00014 36_[+4]_36 chrII:2758654-2758734 0.00014 36_[+4]_36 chrV:20105185-20105265 0.00014 50_[+4]_22 chrI:12759817-12759897 0.00017 72_[+4] chrV:20104576-20104656 0.00017 66_[+4]_6 chrI:692456-692536 0.00017 19_[+4]_53 chrI:13793794-13793874 0.00025 13_[+4]_59 chrI:626041-626121 0.00025 15_[+4]_57 chrI:1448996-1449076 0.00025 8_[+4]_64 chrIII:2013370-2013450 0.00025 28_[+4]_44 chrX:5336172-5336252 0.00025 15_[+4]_57 chrI:1487516-1487596 0.00025 59_[+4]_13 chrIII:1058211-1058291 0.00025 18_[+4]_54 chrIV:16643932-16644012 0.00025 58_[+4]_14 chrIII:2328782-2328862 0.00041 6_[+4]_66 chrV:19633134-19633214 0.00041 70_[+4]_2 chrIII:1879061-1879141 0.00041 38_[+4]_34 chrIV:17329045-17329125 0.00044 3_[+4]_69 chrII:12805327-12805407 0.00044 9_[+4]_63 chrV:20457347-20457427 0.0005 40_[+4]_32 chrIII:11615037-11615117 0.0005 39_[+4]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAATCRA width=8 seqs=78 chrI:2380734-2380814 ( 16) AAAATCGA 1 chrI:625261-625341 ( 73) AAAATCGA 1 chrIII:11280079-11280159 ( 59) AAAATCGA 1 chrI:2338124-2338204 ( 72) AAAATCGA 1 chrII:724179-724259 ( 43) AAAATCGA 1 chrIII:1807677-1807757 ( 4) AAAATCGA 1 chrV:19101757-19101837 ( 47) AAAATCGA 1 chrII:4256679-4256759 ( 73) AAAATCGA 1 chrIII:1834066-1834146 ( 13) AAAATCGA 1 chrV:19099612-19099692 ( 51) AAAATCGA 1 chrII:13316238-13316318 ( 22) AAAATCGA 1 chrIII:2995465-2995545 ( 39) AAAATCGA 1 chrII:3063563-3063643 ( 67) AAAATCGA 1 chrII:13315797-13315877 ( 7) AAAATCGA 1 chrV:19026923-19027003 ( 5) AAAATCGA 1 chrIII:1807441-1807521 ( 52) AAAATCGA 1 chrI:11533774-11533854 ( 57) AAAATCGA 1 chrII:12301404-12301484 ( 25) AAAATCGA 1 chrV:19027523-19027603 ( 11) AAAATCGA 1 chrIII:11614447-11614527 ( 24) AAAATCGA 1 chrIII:1892315-1892395 ( 11) AAAATCGA 1 chrIII:2837468-2837548 ( 60) AAAATCGA 1 chrIV:1435330-1435410 ( 61) AAAATCGA 1 chrIII:2283605-2283685 ( 53) AAAATCGA 1 chrIII:2837217-2837297 ( 62) AAAATCGA 1 chrIII:2836876-2836956 ( 6) AAAATCGA 1 chrI:1488242-1488322 ( 73) AAAATCGA 1 chrIII:2478794-2478874 ( 29) AAAATCAA 1 chrV:19073394-19073474 ( 42) AAAATCAA 1 chrII:2901359-2901439 ( 23) AAAATCAA 1 chrX:183624-183704 ( 49) AAAATCAA 1 chrIV:977963-978043 ( 57) AAAATCAA 1 chrIV:1740819-1740899 ( 24) AAAATCAA 1 chrI:11488169-11488249 ( 52) AAAATCAA 1 chrI:11526066-11526146 ( 43) AAAATCAA 1 chrIII:3242532-3242612 ( 21) AAAATCAA 1 chrI:1816800-1816880 ( 43) AAAATCAA 1 chrIII:2962002-2962082 ( 67) AAAATCAA 1 chrV:19100321-19100401 ( 56) AAAATCAA 1 chrI:1815559-1815639 ( 59) AAAATCAA 1 chrI:627737-627817 ( 67) AAAATCAA 1 chrI:1816567-1816647 ( 67) AAAATCAA 1 chrI:2937068-2937148 ( 25) AAAATCAA 1 chrII:13315998-13316078 ( 26) AAAATCAA 1 chrI:1643233-1643313 ( 70) AAAATCAA 1 chrIV:1740608-1740688 ( 35) AAAATCAA 1 chrIII:1578673-1578753 ( 2) AAAATCAA 1 chrIII:2098346-2098426 ( 40) AAAATCAA 1 chrI:11532855-11532935 ( 62) AAAATCAA 1 chrIV:999849-999929 ( 41) AAAATCAA 1 chrI:11486635-11486715 ( 43) AAAATCAA 1 chrV:19907539-19907619 ( 7) AAAATCAA 1 chrI:11377410-11377490 ( 53) AAAATCAA 1 chrIV:1000590-1000670 ( 45) AAAATCAA 1 chrI:647560-647640 ( 24) AAAATCGG 1 chrI:353358-353438 ( 29) AAAATCGG 1 chrII:2192458-2192538 ( 55) AAAATCGG 1 chrII:13417614-13417694 ( 37) AAAATCGG 1 chrII:2758654-2758734 ( 37) AAAATCGG 1 chrV:20105185-20105265 ( 51) AAAATCGG 1 chrI:12759817-12759897 ( 73) AAAATCAG 1 chrV:20104576-20104656 ( 67) AAAATCAG 1 chrI:692456-692536 ( 20) AAAATCAG 1 chrI:13793794-13793874 ( 14) AAATTCGA 1 chrI:626041-626121 ( 16) AAAAACGA 1 chrI:1448996-1449076 ( 9) AAATTCGA 1 chrIII:2013370-2013450 ( 29) AAAAACGA 1 chrX:5336172-5336252 ( 16) AAATTCGA 1 chrI:1487516-1487596 ( 60) AAAAACGA 1 chrIII:1058211-1058291 ( 19) AAAAACGA 1 chrIV:16643932-16644012 ( 59) AAATTCGA 1 chrIII:2328782-2328862 ( 7) AAATTCAA 1 chrV:19633134-19633214 ( 71) AAATTCAA 1 chrIII:1879061-1879141 ( 39) AAAAACAA 1 chrIV:17329045-17329125 ( 4) AAAAGCGA 1 chrII:12805327-12805407 ( 10) AAAATCGC 1 chrV:20457347-20457427 ( 41) AAAAACGG 1 chrIII:11615037-11615117 ( 40) AAAACCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.78778 E= 6.3e-045 158 -1293 -1293 -1293 158 -1293 -1293 -1293 158 -1293 -1293 -1293 147 -1293 -1293 -212 -212 -371 -367 142 -1293 257 -1293 -1293 34 -1293 182 -1293 136 -371 -35 -1293 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 78 E= 6.3e-045 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.923077 0.000000 0.000000 0.076923 0.076923 0.012821 0.012821 0.897436 0.000000 1.000000 0.000000 0.000000 0.423077 0.000000 0.576923 0.000000 0.858974 0.012821 0.128205 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATCRA MEME-4 regular expression -------------------------------------------------------------------------------- AAAATC[GA]A -------------------------------------------------------------------------------- Time 16.03 secs. ******************************************************************************** ******************************************************************************** MOTIF TTYYRGAA MEME-5 width = 8 sites = 103 llr = 727 E-value = 1.7e-028 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::33aa pos.-specific C :1661::: probability G ::::67:: matrix T a943:::: bits 2.6 2.4 2.1 1.8 Relative 1.6 * * * Entropy 1.3 * * *** (10.2 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTCCGGAA consensus TTAA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrI:353358-353438 41 9.44e-06 aatcggtaat ttccggaa aaatcgataa chrIV:3738711-3738791 36 9.44e-06 ATAGAACCGT TTCCGGAA ACTCGTCCGC chrIII:1965335-1965415 65 9.44e-06 ttatcgattt ttccggaa attttaga chrI:11486072-11486152 67 9.44e-06 ttatcgattt ttccggaa attatc chrIII:2836876-2836956 37 9.44e-06 aatcgataat ttccggaa aaatcgatag chrIII:11733108-11733188 25 2.81e-05 TTTATCGATT TTTCGGAA TATCGATTTT chrIII:2961141-2961221 66 2.81e-05 ttatcgattt tttcggaa aatttat chrI:1643233-1643313 7 2.81e-05 ACCAAT TTTCGGAA AAATCGATAA chrV:19902024-19902104 38 2.81e-05 ttattgattt tttcggaa atttattgat chrI:13805319-13805399 10 2.81e-05 GTTATCAAT TTTCGGAA TTTTCAAAAT chrV:19630119-19630199 19 2.81e-05 AAGATCGATT TTTCGGAA AAATATCATT chrIII:1879061-1879141 71 2.81e-05 aatcgataat tttcggaa aa chrX:183624-183704 22 6.61e-05 atcgataaat ttccagaa aaattgataa chrI:1816800-1816880 56 6.61e-05 ATCAATAAAT TTCCAGAA AATCAATAAT chrIV:1006796-1006876 25 6.61e-05 TTATCGATTT TTCCAGAA AATTAAAAAT chrI:1816567-1816647 42 6.61e-05 ATCAATATTT TTCCAGAA AAGCGATAAA chrV:18993672-18993752 26 6.61e-05 ttattgactt ttctggaa ctttatcgat chrV:20105185-20105265 73 6.61e-05 AAATCGATTT TTCCAGAA chrV:19101757-19101837 1 6.61e-05 . ttccagaa aaatcaataa chrV:19635651-19635731 44 6.61e-05 ttattgattt ttctggaa acttattgat chrV:18984846-18984926 49 6.61e-05 ttatcgattt ttctggaa atttatcgat chrV:19027523-19027603 42 6.61e-05 aatcgataaa ttccagaa aaaatcgata chrV:19112718-19112798 50 6.61e-05 ttatcgattt ttctggaa ttttatcgat chrV:19113790-19113870 26 6.61e-05 ttatcgattt ttctggaa ttttatcgat chrIII:1955686-1955766 46 6.61e-05 TTATCGATTT TTCCAGAA ATTATCGATT chrV:19909569-19909649 50 6.61e-05 TTATTGATTT TTCTGGAA GTTTATTGAT chrI:354955-355035 43 6.61e-05 ttatcgattt ttctggaa tatatcgatt chrV:19904946-19905026 62 6.61e-05 ttattgatct ttctggaa atttattgat chrI:11486635-11486715 17 6.61e-05 AATCGATAAT TTCCAGAA AAATCGATAA chrV:19906161-19906241 3 6.61e-05 at ttccagaa aaatcaataa chrV:19907539-19907619 60 6.61e-05 atcgataaat ttccagaa aaatcaatga chrIV:1443637-1443717 47 6.61e-05 ttatcgattt ttctggaa ttttatcgat chrI:11377410-11377490 24 6.61e-05 ATCGATAAAA TTCCAGAA AAATCAATAA chrIII:2837468-2837548 13 6.61e-05 aatcgataat ttctggaa aaaccgataa chrIII:1876444-1876524 12 7.09e-05 ATCAATAAAT TCCCGGAA AATCGATAAT chrI:626041-626121 38 9.03e-05 TATTGATTTT TTCCGAAA AAATTACAAA chrIV:15453556-15453636 21 9.03e-05 ATCGATTTTT TTCCGAAA AAATCCACGA chrIII:3170683-3170763 61 9.03e-05 TTTATCGATT TTCCGAAA AATTATCGAT chrII:614888-614968 45 9.49e-05 ATCGATATTT TTCCGGGA AAAAATCAAT chrI:11533774-11533854 12 1.05e-04 AATCGATAAT TTCCCGAA AAATCGATAA chrI:627938-628018 19 1.89e-04 GTGAATTTTT TTTTGGAA AAATCAATAA chrIII:2112914-2112994 39 1.89e-04 aattacagat ttttggaa attatcgatt chrI:2380734-2380814 27 1.89e-04 AAATCGAGTT TTTCAGAA ATAAAAATTA chrI:1448996-1449076 1 1.89e-04 . TTTCAGAA AAATTCGATA chrV:19100321-19100401 9 1.89e-04 CAATAAAT TTTCAGAA AAATCAATAA chrI:627737-627817 59 1.89e-04 TTTCGATTTT TTTTGGAA AAAATCAATA chrI:697829-697909 20 1.89e-04 ATCGAATTTT TTCGGGAA AATATCGATT chrIII:2282408-2282488 20 1.89e-04 aatattgatt ttcgggaa attatcgatt chrII:13414266-13414346 71 1.89e-04 attatcgatt ttttggaa at chrIII:2960935-2961015 68 1.89e-04 tttatcgatt tttcagaa attta chrII:13315797-13315877 38 1.89e-04 AATCGATAAA TTTTGGAA AAATCGATAA chrV:19026923-19027003 38 1.89e-04 atcgataaat tttcagaa aaatcgataa chrII:12301404-12301484 17 1.89e-04 AATCGATAAT TTTTGGAA AAAATCGAAA chrIV:1435330-1435410 35 1.89e-04 atcaataaat tttcagaa aaatcgataa chrIV:983733-983813 71 1.89e-04 TTTATCGATT TTTCAGAA TG chrIII:2837217-2837297 17 1.89e-04 aaatcgataa tttcagaa aaattgataa chrIII:1807677-1807757 55 2.37e-04 atcgataatt tctcggaa aatcgataac chrI:2365022-2365102 14 2.37e-04 TTATTGATTT TTCTAGAA CAATATTGAT chrX:2841637-2841717 12 2.37e-04 TAGGCCTCAG TTCTAGAA AATGGCAAAA chrIV:1740819-1740899 37 2.56e-04 atcaataaat tcccagaa aaatcgataa chrI:11388935-11389015 54 2.56e-04 TTATCGATTT TCCCAGAA ATCATCGATT chrIV:15528394-15528474 41 2.56e-04 ATCGGAAAAT TCCTGGAA AATATCGATT chrIII:2962002-2962082 40 2.94e-04 CAATAAAATC TTTCGAAA AAAATCGATA chrIV:2391993-2392073 59 2.94e-04 GTGCACCGAA TTTCGAAA TATTGTCTCT chrIV:1437763-1437843 54 3.72e-04 cctgaagttt ttctgaaa attattgagt chrI:2338124-2338204 52 3.72e-04 ATCGATTTTT TTCCAAAA ATATCGTTAG chrIV:991819-991899 11 3.72e-04 TTATCAGTTT TTCCAAAA AATTATCGAT chrIII:1834066-1834146 46 3.72e-04 atcgataatt ttccaaaa aaaaaatcga chrV:19099612-19099692 64 3.72e-04 ATCGATAAAT TTCCAAAA AATCGATAT chrIV:999849-999929 70 3.72e-04 ACTCGATACT TTCCAAAA AAA chrIV:1408320-1408400 15 3.72e-04 tattcgattt ttctgaaa tttcatcgat chrV:17926337-17926417 47 3.91e-04 ACCCCAAAAA TCCCGAAA AAACCAATAA chrIII:2995465-2995545 6 3.91e-04 AATTT TACCGGAA TTTCGATAAA chrIII:1805746-1805826 68 3.91e-04 atcgataaat taccggaa aatcg chrV:5558135-5558215 20 4.00e-04 TAAGTACCTT TTTCGGGA CGAAGTATGG chrV:43230-43310 58 4.38e-04 TATCGATATT TTCCAGGA AAAATCGATA chrIV:16643932-16644012 34 4.38e-04 ttttcgaaaa ttccagga attatcgatt chrV:19121253-19121333 38 4.78e-04 TATTGATTTT TTTGGGAA TTTATTGATT chrI:11488169-11488249 44 5.77e-04 TTTTCGCCGG TCCCCGAA AAAATCAATA chrI:625261-625341 26 6.24e-04 TTTGTGAATT TCTTGGAA AAAAATCAAT chrI:1987503-1987583 51 6.24e-04 GCAGTGAAAT TCTTGGAA AAATCGATAA chrIV:1740608-1740688 8 6.24e-04 GATAAAC TCTCAGAA AAATCAATAA chrIV:848989-849069 18 6.24e-04 tattgatttt tcttggaa attatcgatt chrIV:1000590-1000670 18 6.24e-04 TCGATATATT TTCCGGAG AAATCAATAC chrI:1815559-1815639 14 6.53e-04 AATCAATAAA TTCCGAGA AAATTATTAA chrIV:977963-978043 10 6.73e-04 ATCAATAAT TTCCCAAA AAATCAATAA chrIII:11615037-11615117 14 6.73e-04 ATCGATAATT TTCCCAAA AGTCAATAAT chrX:11974821-11974901 12 8.46e-04 TTAACTCGCG TTTTGAAA AAATCAATAA chrIII:1584462-1584542 25 8.46e-04 TATTGAATTT TTTTGAAA AATCCGGGAA chrII:13417614-13417694 57 8.46e-04 ataatcgatt ttttgaaa atcggcaatt chrI:2334883-2334963 13 8.46e-04 GTTATCGATT TTTTGAAA ATTATCGATT chrII:3064145-3064225 31 8.46e-04 AATCGATATT TTTCAAAA AAATTGAAAA chrIII:2112711-2112791 58 8.46e-04 CGATAATTCC TTCGGAAA ATATCGATTT chrIII:1058211-1058291 2 8.46e-04 T TTTTGAAA AATTCTGTAA chrI:649294-649374 57 8.46e-04 tttatcgatt ttttgaaa tttatcgatt chrI:13804196-13804276 41 9.62e-04 acaaaatttc tatcggaa acttcaaatt chrIII:1807441-1807521 27 9.62e-04 atcgatatct tatcggaa aatcgatatt chrI:1739937-1740017 59 9.62e-04 ccgtgAAAGT TTCTAAAA ACACTTGCAA chrI:96152-96232 66 9.62e-04 TTGATTTTTT TTCTAAAA CAGAAAA chrIII:1583661-1583741 40 9.62e-04 TTCCGGATTC TTCTAAAA AAAATCGATA chrIII:10861462-10861542 28 1.20e-03 AAATTTGTTT TTCCTGAA AAATCGATAA chrV:20104576-20104656 19 1.20e-03 AATTTCAGAT TTTTCGAA TTTTTTAAAA chrIII:2283605-2283685 65 1.20e-03 AATCGATAAT TTCGCGAA ATTATCGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:353358-353438 9.4e-06 40_[+5]_32 chrIV:3738711-3738791 9.4e-06 35_[+5]_37 chrIII:1965335-1965415 9.4e-06 64_[+5]_8 chrI:11486072-11486152 9.4e-06 66_[+5]_6 chrIII:2836876-2836956 9.4e-06 36_[+5]_36 chrIII:11733108-11733188 2.8e-05 24_[+5]_48 chrIII:2961141-2961221 2.8e-05 65_[+5]_7 chrI:1643233-1643313 2.8e-05 6_[+5]_66 chrV:19902024-19902104 2.8e-05 37_[+5]_35 chrI:13805319-13805399 2.8e-05 9_[+5]_63 chrV:19630119-19630199 2.8e-05 18_[+5]_54 chrIII:1879061-1879141 2.8e-05 70_[+5]_2 chrX:183624-183704 6.6e-05 21_[+5]_51 chrI:1816800-1816880 6.6e-05 55_[+5]_17 chrIV:1006796-1006876 6.6e-05 24_[+5]_48 chrI:1816567-1816647 6.6e-05 41_[+5]_31 chrV:18993672-18993752 6.6e-05 25_[+5]_47 chrV:20105185-20105265 6.6e-05 72_[+5] chrV:19101757-19101837 6.6e-05 [+5]_72 chrV:19635651-19635731 6.6e-05 43_[+5]_29 chrV:18984846-18984926 6.6e-05 48_[+5]_24 chrV:19027523-19027603 6.6e-05 41_[+5]_31 chrV:19112718-19112798 6.6e-05 49_[+5]_23 chrV:19113790-19113870 6.6e-05 25_[+5]_47 chrIII:1955686-1955766 6.6e-05 45_[+5]_27 chrV:19909569-19909649 6.6e-05 49_[+5]_23 chrI:354955-355035 6.6e-05 42_[+5]_30 chrV:19904946-19905026 6.6e-05 61_[+5]_11 chrI:11486635-11486715 6.6e-05 16_[+5]_56 chrV:19906161-19906241 6.6e-05 2_[+5]_70 chrV:19907539-19907619 6.6e-05 59_[+5]_13 chrIV:1443637-1443717 6.6e-05 46_[+5]_26 chrI:11377410-11377490 6.6e-05 23_[+5]_49 chrIII:2837468-2837548 6.6e-05 12_[+5]_60 chrIII:1876444-1876524 7.1e-05 11_[+5]_61 chrI:626041-626121 9e-05 37_[+5]_35 chrIV:15453556-15453636 9e-05 20_[+5]_52 chrIII:3170683-3170763 9e-05 60_[+5]_12 chrII:614888-614968 9.5e-05 44_[+5]_28 chrI:11533774-11533854 0.0001 11_[+5]_61 chrI:627938-628018 0.00019 18_[+5]_54 chrIII:2112914-2112994 0.00019 38_[+5]_34 chrI:2380734-2380814 0.00019 26_[+5]_46 chrI:1448996-1449076 0.00019 [+5]_72 chrV:19100321-19100401 0.00019 8_[+5]_64 chrI:627737-627817 0.00019 58_[+5]_14 chrI:697829-697909 0.00019 19_[+5]_53 chrIII:2282408-2282488 0.00019 19_[+5]_53 chrII:13414266-13414346 0.00019 70_[+5]_2 chrIII:2960935-2961015 0.00019 67_[+5]_5 chrII:13315797-13315877 0.00019 37_[+5]_35 chrV:19026923-19027003 0.00019 37_[+5]_35 chrII:12301404-12301484 0.00019 16_[+5]_56 chrIV:1435330-1435410 0.00019 34_[+5]_38 chrIV:983733-983813 0.00019 70_[+5]_2 chrIII:2837217-2837297 0.00019 16_[+5]_56 chrIII:1807677-1807757 0.00024 54_[+5]_18 chrI:2365022-2365102 0.00024 13_[+5]_59 chrX:2841637-2841717 0.00024 11_[+5]_61 chrIV:1740819-1740899 0.00026 36_[+5]_36 chrI:11388935-11389015 0.00026 53_[+5]_19 chrIV:15528394-15528474 0.00026 40_[+5]_32 chrIII:2962002-2962082 0.00029 39_[+5]_33 chrIV:2391993-2392073 0.00029 58_[+5]_14 chrIV:1437763-1437843 0.00037 53_[+5]_19 chrI:2338124-2338204 0.00037 51_[+5]_21 chrIV:991819-991899 0.00037 10_[+5]_62 chrIII:1834066-1834146 0.00037 45_[+5]_27 chrV:19099612-19099692 0.00037 63_[+5]_9 chrIV:999849-999929 0.00037 69_[+5]_3 chrIV:1408320-1408400 0.00037 14_[+5]_58 chrV:17926337-17926417 0.00039 46_[+5]_26 chrIII:2995465-2995545 0.00039 5_[+5]_67 chrIII:1805746-1805826 0.00039 67_[+5]_5 chrV:5558135-5558215 0.0004 19_[+5]_53 chrV:43230-43310 0.00044 57_[+5]_15 chrIV:16643932-16644012 0.00044 33_[+5]_39 chrV:19121253-19121333 0.00048 37_[+5]_35 chrI:11488169-11488249 0.00058 43_[+5]_29 chrI:625261-625341 0.00062 25_[+5]_47 chrI:1987503-1987583 0.00062 50_[+5]_22 chrIV:1740608-1740688 0.00062 7_[+5]_65 chrIV:848989-849069 0.00062 17_[+5]_55 chrIV:1000590-1000670 0.00062 17_[+5]_55 chrI:1815559-1815639 0.00065 13_[+5]_59 chrIV:977963-978043 0.00067 9_[+5]_63 chrIII:11615037-11615117 0.00067 13_[+5]_59 chrX:11974821-11974901 0.00085 11_[+5]_61 chrIII:1584462-1584542 0.00085 24_[+5]_48 chrII:13417614-13417694 0.00085 56_[+5]_16 chrI:2334883-2334963 0.00085 12_[+5]_60 chrII:3064145-3064225 0.00085 30_[+5]_42 chrIII:2112711-2112791 0.00085 57_[+5]_15 chrIII:1058211-1058291 0.00085 1_[+5]_71 chrI:649294-649374 0.00085 56_[+5]_16 chrI:13804196-13804276 0.00096 40_[+5]_32 chrIII:1807441-1807521 0.00096 26_[+5]_46 chrI:1739937-1740017 0.00096 58_[+5]_14 chrI:96152-96232 0.00096 65_[+5]_7 chrIII:1583661-1583741 0.00096 39_[+5]_33 chrIII:10861462-10861542 0.0012 27_[+5]_45 chrV:20104576-20104656 0.0012 18_[+5]_54 chrIII:2283605-2283685 0.0012 64_[+5]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTYYRGAA width=8 seqs=103 chrI:353358-353438 ( 41) TTCCGGAA 1 chrIV:3738711-3738791 ( 36) TTCCGGAA 1 chrIII:1965335-1965415 ( 65) TTCCGGAA 1 chrI:11486072-11486152 ( 67) TTCCGGAA 1 chrIII:2836876-2836956 ( 37) TTCCGGAA 1 chrIII:11733108-11733188 ( 25) TTTCGGAA 1 chrIII:2961141-2961221 ( 66) TTTCGGAA 1 chrI:1643233-1643313 ( 7) TTTCGGAA 1 chrV:19902024-19902104 ( 38) TTTCGGAA 1 chrI:13805319-13805399 ( 10) TTTCGGAA 1 chrV:19630119-19630199 ( 19) TTTCGGAA 1 chrIII:1879061-1879141 ( 71) TTTCGGAA 1 chrX:183624-183704 ( 22) TTCCAGAA 1 chrI:1816800-1816880 ( 56) TTCCAGAA 1 chrIV:1006796-1006876 ( 25) TTCCAGAA 1 chrI:1816567-1816647 ( 42) TTCCAGAA 1 chrV:18993672-18993752 ( 26) TTCTGGAA 1 chrV:20105185-20105265 ( 73) TTCCAGAA 1 chrV:19101757-19101837 ( 1) TTCCAGAA 1 chrV:19635651-19635731 ( 44) TTCTGGAA 1 chrV:18984846-18984926 ( 49) TTCTGGAA 1 chrV:19027523-19027603 ( 42) TTCCAGAA 1 chrV:19112718-19112798 ( 50) TTCTGGAA 1 chrV:19113790-19113870 ( 26) TTCTGGAA 1 chrIII:1955686-1955766 ( 46) TTCCAGAA 1 chrV:19909569-19909649 ( 50) TTCTGGAA 1 chrI:354955-355035 ( 43) TTCTGGAA 1 chrV:19904946-19905026 ( 62) TTCTGGAA 1 chrI:11486635-11486715 ( 17) TTCCAGAA 1 chrV:19906161-19906241 ( 3) TTCCAGAA 1 chrV:19907539-19907619 ( 60) TTCCAGAA 1 chrIV:1443637-1443717 ( 47) TTCTGGAA 1 chrI:11377410-11377490 ( 24) TTCCAGAA 1 chrIII:2837468-2837548 ( 13) TTCTGGAA 1 chrIII:1876444-1876524 ( 12) TCCCGGAA 1 chrI:626041-626121 ( 38) TTCCGAAA 1 chrIV:15453556-15453636 ( 21) TTCCGAAA 1 chrIII:3170683-3170763 ( 61) TTCCGAAA 1 chrII:614888-614968 ( 45) TTCCGGGA 1 chrI:11533774-11533854 ( 12) TTCCCGAA 1 chrI:627938-628018 ( 19) TTTTGGAA 1 chrIII:2112914-2112994 ( 39) TTTTGGAA 1 chrI:2380734-2380814 ( 27) TTTCAGAA 1 chrI:1448996-1449076 ( 1) TTTCAGAA 1 chrV:19100321-19100401 ( 9) TTTCAGAA 1 chrI:627737-627817 ( 59) TTTTGGAA 1 chrI:697829-697909 ( 20) TTCGGGAA 1 chrIII:2282408-2282488 ( 20) TTCGGGAA 1 chrII:13414266-13414346 ( 71) TTTTGGAA 1 chrIII:2960935-2961015 ( 68) TTTCAGAA 1 chrII:13315797-13315877 ( 38) TTTTGGAA 1 chrV:19026923-19027003 ( 38) TTTCAGAA 1 chrII:12301404-12301484 ( 17) TTTTGGAA 1 chrIV:1435330-1435410 ( 35) TTTCAGAA 1 chrIV:983733-983813 ( 71) TTTCAGAA 1 chrIII:2837217-2837297 ( 17) TTTCAGAA 1 chrIII:1807677-1807757 ( 55) TCTCGGAA 1 chrI:2365022-2365102 ( 14) TTCTAGAA 1 chrX:2841637-2841717 ( 12) TTCTAGAA 1 chrIV:1740819-1740899 ( 37) TCCCAGAA 1 chrI:11388935-11389015 ( 54) TCCCAGAA 1 chrIV:15528394-15528474 ( 41) TCCTGGAA 1 chrIII:2962002-2962082 ( 40) TTTCGAAA 1 chrIV:2391993-2392073 ( 59) TTTCGAAA 1 chrIV:1437763-1437843 ( 54) TTCTGAAA 1 chrI:2338124-2338204 ( 52) TTCCAAAA 1 chrIV:991819-991899 ( 11) TTCCAAAA 1 chrIII:1834066-1834146 ( 46) TTCCAAAA 1 chrV:19099612-19099692 ( 64) TTCCAAAA 1 chrIV:999849-999929 ( 70) TTCCAAAA 1 chrIV:1408320-1408400 ( 15) TTCTGAAA 1 chrV:17926337-17926417 ( 47) TCCCGAAA 1 chrIII:2995465-2995545 ( 6) TACCGGAA 1 chrIII:1805746-1805826 ( 68) TACCGGAA 1 chrV:5558135-5558215 ( 20) TTTCGGGA 1 chrV:43230-43310 ( 58) TTCCAGGA 1 chrIV:16643932-16644012 ( 34) TTCCAGGA 1 chrV:19121253-19121333 ( 38) TTTGGGAA 1 chrI:11488169-11488249 ( 44) TCCCCGAA 1 chrI:625261-625341 ( 26) TCTTGGAA 1 chrI:1987503-1987583 ( 51) TCTTGGAA 1 chrIV:1740608-1740688 ( 8) TCTCAGAA 1 chrIV:848989-849069 ( 18) TCTTGGAA 1 chrIV:1000590-1000670 ( 18) TTCCGGAG 1 chrI:1815559-1815639 ( 14) TTCCGAGA 1 chrIV:977963-978043 ( 10) TTCCCAAA 1 chrIII:11615037-11615117 ( 14) TTCCCAAA 1 chrX:11974821-11974901 ( 12) TTTTGAAA 1 chrIII:1584462-1584542 ( 25) TTTTGAAA 1 chrII:13417614-13417694 ( 57) TTTTGAAA 1 chrI:2334883-2334963 ( 13) TTTTGAAA 1 chrII:3064145-3064225 ( 31) TTTCAAAA 1 chrIII:2112711-2112791 ( 58) TTCGGAAA 1 chrIII:1058211-1058291 ( 2) TTTTGAAA 1 chrI:649294-649374 ( 57) TTTTGAAA 1 chrI:13804196-13804276 ( 41) TATCGGAA 1 chrIII:1807441-1807521 ( 27) TATCGGAA 1 chrI:1739937-1740017 ( 59) TTCTAAAA 1 chrI:96152-96232 ( 66) TTCTAAAA 1 chrIII:1583661-1583741 ( 40) TTCTAAAA 1 chrIII:10861462-10861542 ( 28) TTCCTGAA 1 chrV:20104576-20104656 ( 19) TTTTCGAA 1 chrIII:2283605-2283685 ( 65) TTCGCGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.62213 E= 1.7e-028 -1333 -1333 -1333 158 -310 -66 -1333 135 -1333 186 -1333 22 -1333 188 -175 -2 7 -153 184 -510 -35 -1333 218 -1333 151 -1333 -175 -1333 157 -1333 -407 -1333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 103 E= 1.7e-028 0.000000 0.000000 0.000000 1.000000 0.038835 0.106796 0.000000 0.854369 0.000000 0.611650 0.000000 0.388350 0.000000 0.621359 0.048544 0.330097 0.349515 0.058252 0.582524 0.009709 0.262136 0.000000 0.737864 0.000000 0.951456 0.000000 0.048544 0.000000 0.990291 0.000000 0.009709 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTYYRGAA MEME-5 regular expression -------------------------------------------------------------------------------- TT[CT][CT][GA][GA]AA -------------------------------------------------------------------------------- Time 18.85 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:17119146-17119226 6.03e-05 31_[+4(3.82e-05)]_41 chrII:3315067-3315147 9.15e-03 80 chrI:1488242-1488322 1.63e-04 72_[+4(3.82e-05)] chrIII:2836876-2836956 5.12e-07 5_[+4(3.82e-05)]_4_[+5(9.44e-06)]_\ 11_[+5(9.44e-06)]_18_[+4(3.82e-05)]_10 chrIII:2837217-2837297 5.12e-07 5_[+4(3.82e-05)]_29_[+4(3.82e-05)]_\ 4_[+5(9.44e-06)]_18 chrIII:2283605-2283685 2.68e-05 11_[+4(3.82e-05)]_12_[+4(3.82e-05)]_\ 13_[+4(3.82e-05)]_20 chrIV:983733-983813 1.01e-06 43_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 9 chrIV:1000590-1000670 1.73e-06 3_[+4(3.82e-05)]_53_[+4(3.82e-05)]_\ 8 chrIV:1435330-1435410 6.16e-06 2_[+4(3.82e-05)]_31_[+4(3.82e-05)]_\ 11_[+4(3.82e-05)]_12 chrIII:1583661-1583741 9.46e-08 47_[+4(3.82e-05)]_16_[+1(3.82e-05)]_\ 1 chrIV:2236120-2236200 2.75e-06 58_[+1(3.82e-05)]_14 chrI:649294-649374 1.83e-05 32_[+1(3.82e-05)]_9_[+1(3.82e-05)]_\ 10_[+1(3.82e-05)]_5 chrIII:2837468-2837548 5.12e-07 [+4(3.82e-05)]_4_[+5(6.61e-05)]_20_\ [+4(3.82e-05)]_4_[+5(9.44e-06)]_20 chrIII:11971524-11971604 3.16e-04 11_[+4(3.82e-05)]_61 chrI:13413094-13413174 1.93e-03 80 chrII:5820428-5820508 2.21e-04 68_[+4(3.82e-05)]_4 chrX:17464944-17465024 5.18e-05 47_[+1(3.82e-05)]_25 chrI:11377410-11377490 4.50e-06 2_[+5(6.61e-05)]_[+4(3.82e-05)]_5_\ [+5(6.61e-05)]_49 chrX:2841637-2841717 2.37e-04 80 chrIII:2994141-2994221 1.59e-05 7_[+1(3.82e-05)]_23_[+1(3.82e-05)]_\ 34 chrIV:1443637-1443717 4.57e-06 19_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ [+5(6.61e-05)]_4_[+1(3.82e-05)]_14 chrIV:16643932-16644012 5.57e-07 17_[+1(3.82e-05)]_19_[+1(3.82e-05)]_\ 20_[+1(3.82e-05)] chrX:11290662-11290742 3.87e-03 55_[+1(3.82e-05)]_17 chrV:19907539-19907619 4.50e-06 26_[+4(3.82e-05)]_12_[+4(3.82e-05)]_\ 5_[+5(6.61e-05)]_13 chrIII:1580305-1580385 2.40e-08 13_[+1(3.82e-05)]_15_[+4(3.82e-05)]_\ 18_[+1(3.82e-05)]_10 chrIII:1892315-1892395 1.61e-05 10_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 11_[+2(3.82e-05)]_10_[+4(3.82e-05)]_6 chrV:19906161-19906241 1.95e-06 2_[+5(6.61e-05)]_70 chrI:11486635-11486715 2.60e-06 4_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 4_[+5(6.61e-05)]_37 chrV:19904946-19905026 2.53e-04 3_[+5(6.61e-05)]_11_[+5(6.61e-05)]_\ 11_[+5(6.61e-05)]_12_[+5(6.61e-05)]_11 chrI:1489489-1489569 1.18e-04 49_[+1(3.82e-05)]_23 chrII:6191504-6191584 1.18e-03 32_[+4(3.82e-05)]_40 chrII:12805327-12805407 2.90e-04 40_[+4(3.82e-05)]_32 chrIII:1879061-1879141 1.28e-06 18_[+4(3.82e-05)]_32_[+4(3.82e-05)]_\ 4_[+5(2.81e-05)]_2 chrIII:11614447-11614527 3.36e-06 4_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 12_[+4(3.82e-05)]_12_[+4(3.82e-05)]_9 chrI:11486072-11486152 7.32e-07 20_[+1(3.82e-05)]_12_[+3(3.82e-05)]_\ 10_[+1(3.82e-05)]_[+5(9.44e-06)]_6 chrIII:11615037-11615117 1.71e-05 [+4(3.82e-05)]_50_[+4(3.82e-05)]_14 chrI:354955-355035 2.08e-06 4_[+5(6.61e-05)]_3_[+1(3.82e-05)]_\ [+5(6.61e-05)]_3_[+1(3.82e-05)]_[+5(6.61e-05)]_3_[+1(3.82e-05)]_\ [+5(6.61e-05)]_3_[+1(3.82e-05)] chrII:14102277-14102357 5.33e-04 51_[+2(3.82e-05)]_21 chrV:5558135-5558215 5.61e-04 80 chrIII:1805746-1805826 1.17e-05 54_[+4(3.82e-05)]_18 chrV:19909569-19909649 1.80e-05 1_[+1(3.82e-05)]_40_[+5(6.61e-05)]_\ 23 chrIII:1955686-1955766 8.52e-07 15_[+1(3.82e-05)]_14_[+1(3.82e-05)]_\ [+5(6.61e-05)]_3_[+1(3.82e-05)]_[+5(2.81e-05)]_8 chrV:19113790-19113870 4.47e-06 5_[+5(6.61e-05)]_4_[+1(3.82e-05)]_\ [+5(6.61e-05)]_4_[+1(3.82e-05)]_11_[+1(3.82e-05)]_[+5(6.61e-05)]_8 chrIII:12411203-12411283 2.18e-05 2_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ 36_[+1(3.82e-05)]_7 chrII:12255698-12255778 1.49e-05 1_[+1(3.82e-05)]_23_[+1(3.82e-05)]_\ 28_[+1(3.82e-05)]_4 chrV:19112718-19112798 4.47e-06 21_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ [+5(6.61e-05)]_4_[+1(3.82e-05)]_11 chrI:96152-96232 1.72e-05 80 chrI:11487312-11487392 8.12e-06 11_[+1(3.82e-05)]_30_[+1(3.82e-05)]_\ 11_[+1(3.82e-05)]_4 chrIII:204086-204166 1.72e-04 20_[+1(3.82e-05)]_52 chrI:3375823-3375903 4.56e-05 37_[+1(3.82e-05)]_35 chrI:12214357-12214437 4.55e-06 23_[+1(3.82e-05)]_36_[+1(3.82e-05)]_\ 5 chrIV:11694391-11694471 3.00e-03 39_[+1(3.82e-05)]_33 chrV:19027523-19027603 4.50e-06 10_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 4_[+5(6.61e-05)]_[+4(3.82e-05)]_11_[+4(3.82e-05)]_4 chrII:12301404-12301484 6.16e-06 4_[+4(3.82e-05)]_12_[+4(3.82e-05)]_\ [+4(3.82e-05)]_20_[+4(3.82e-05)]_12 chrIV:1408320-1408400 1.43e-06 7_[+3(3.82e-05)]_18_[+5(2.81e-05)]_\ 4_[+1(3.82e-05)]_[+5(6.61e-05)]_4_[+1(3.82e-05)]_7 chrV:18984846-18984926 3.91e-06 [+1(3.82e-05)]_12_[+1(3.82e-05)]_12_\ [+1(3.82e-05)]_[+5(6.61e-05)]_4_[+1(3.82e-05)]_12 chrIV:999849-999929 1.07e-05 3_[+4(3.82e-05)]_10_[+4(3.82e-05)]_\ 51 chrI:11384765-11384845 2.24e-04 10_[+1(3.82e-05)]_52_[+1(3.82e-05)]_\ 2 chrIII:1058211-1058291 6.90e-07 59_[+4(3.82e-05)]_13 chrIV:10735088-10735168 7.76e-01 80 chrIII:2438723-2438803 3.90e-01 80 chrI:1739937-1740017 3.65e-01 80 chrI:11533774-11533854 3.80e-06 [+2(3.82e-05)]_10_[+4(3.82e-05)]_11_\ [+4(3.82e-05)]_11_[+4(3.82e-05)]_16 chrX:2898240-2898320 8.19e-03 80 chrIII:1876444-1876524 3.68e-07 17_[+4(3.82e-05)]_55 chrIII:1807441-1807521 2.45e-06 13_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 11_[+4(3.82e-05)]_11_[+4(3.82e-05)]_2 chrV:19635651-19635731 2.53e-04 3_[+5(6.61e-05)]_12_[+5(6.61e-05)]_\ 12_[+5(6.61e-05)]_12_[+5(6.61e-05)]_9 chrV:19026923-19027003 7.20e-06 4_[+4(3.82e-05)]_12_[+4(3.82e-05)]_\ 12_[+4(3.82e-05)]_12_[+4(3.82e-05)]_8 chrIII:2014271-2014351 1.21e-04 3_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ 30_[+1(3.82e-05)]_12 chrI:11532855-11532935 4.31e-03 80 chrII:13315797-13315877 7.20e-06 6_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 11_[+4(3.82e-05)]_11_[+4(3.82e-05)]_9 chrII:3063563-3063643 6.13e-07 2_[+1(3.82e-05)]_17_[+4(3.82e-05)]_\ 6_[+1(3.82e-05)]_17_[+4(3.82e-05)]_6 chrIV:848989-849069 2.28e-05 28_[+1(3.82e-05)]_32_[+1(3.82e-05)]_\ 4 chrV:19630119-19630199 1.56e-06 18_[+5(2.81e-05)]_24_[+1(3.82e-05)]_\ 22 chrI:649963-650043 7.95e-05 4_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ 12_[+1(3.82e-05)]_10_[+1(3.82e-05)]_11 chrI:13805319-13805399 6.09e-07 9_[+5(2.81e-05)]_25_[+1(3.82e-05)]_\ 30 chrIII:2995465-2995545 4.45e-08 38_[+4(3.82e-05)]_6_[+1(3.82e-05)]_\ 10_[+4(3.82e-05)]_2 chrIII:2014072-2014152 1.21e-04 11_[+1(3.82e-05)]_31_[+1(3.82e-05)]_\ 22 chrV:19902024-19902104 1.30e-04 17_[+5(6.61e-05)]_12_[+5(2.81e-05)]_\ 12_[+5(2.81e-05)]_15 chrI:3004068-3004148 5.22e-05 41_[+4(3.82e-05)]_31 chrV:19633134-19633214 6.40e-06 11_[+1(3.82e-05)]_61 chrIV:1751389-1751469 7.45e-01 80 chrII:11166531-11166611 5.02e-01 80 chrII:7755359-7755439 1.93e-04 28_[+1(3.82e-05)]_44 chrII:13316238-13316318 1.86e-05 4_[+2(3.82e-05)]_9_[+4(3.82e-05)]_\ [+4(3.82e-05)]_10_[+4(3.82e-05)]_3_[+1(7.65e-05)]_14 chrI:13804196-13804276 5.33e-02 80 chrIII:2328782-2328862 8.34e-07 49_[+1(3.82e-05)]_23 chrIII:2098346-2098426 1.27e-08 [+4(3.82e-05)]_25_[+5(9.03e-05)]_21_\ [+1(3.82e-05)]_10 chrV:19099612-19099692 3.41e-06 32_[+4(3.82e-05)]_10_[+4(3.82e-05)]_\ 11_[+4(3.82e-05)]_3 chrI:1487516-1487596 7.16e-07 27_[+4(3.82e-05)]_7_[+1(3.82e-05)]_\ 30 chrIII:1578673-1578753 5.45e-07 39_[+1(3.82e-05)]_17_[+4(3.82e-05)]_\ 8 chrIII:1834066-1834146 1.13e-06 12_[+4(3.82e-05)]_12_[+4(3.82e-05)]_\ 15_[+4(3.82e-05)]_17 chrIII:2419689-2419769 2.22e-03 80 chrIII:2960935-2961015 1.82e-06 10_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 9_[+5(2.81e-05)]_5_[+1(3.82e-05)]_12 chrIII:3170683-3170763 4.77e-06 18_[+1(3.82e-05)]_27_[+1(3.82e-05)]_\ 11_[+1(3.82e-05)] chrIV:2313894-2313974 4.76e-07 3_[+1(3.82e-05)]_9_[+4(3.82e-05)]_\ 52 chrIII:2780480-2780560 1.81e-05 34_[+1(3.82e-05)]_38 chrIV:1740608-1740688 2.55e-05 54_[+4(3.82e-05)]_18 chrII:13414266-13414346 1.57e-06 12_[+1(3.82e-05)]_17_[+1(3.82e-05)]_\ 18_[+1(3.82e-05)]_9 chrIII:1618450-1618530 9.43e-05 54_[+4(3.82e-05)]_18 chrII:2502639-2502719 8.07e-03 80 chrIV:978357-978437 6.33e-05 80 chrIII:12978585-12978665 4.88e-03 80 chrIII:2282408-2282488 8.72e-06 30_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 22 chrI:1643233-1643313 1.53e-08 6_[+5(2.81e-05)]_13_[+3(3.82e-05)]_\ 8_[+4(3.82e-05)]_11_[+5(2.81e-05)]_10 chrII:4256679-4256759 6.80e-05 72_[+4(3.82e-05)] chrX:5841978-5842058 1.72e-04 36_[+1(3.82e-05)]_36 chrV:43230-43310 4.90e-08 25_[+1(3.82e-05)]_15_[+1(7.65e-05)]_\ 9_[+4(3.82e-05)]_7 chrV:19101757-19101837 3.04e-06 [+5(6.61e-05)]_18_[+4(3.82e-05)]_12_\ [+4(3.82e-05)]_5_[+5(6.61e-05)]_13 chrX:1339434-1339514 2.15e-04 49_[+1(3.82e-05)]_23 chrIV:991819-991899 1.51e-05 22_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 12_[+3(3.82e-05)]_10 chrI:1870818-1870898 5.08e-02 80 chrIV:206872-206952 7.23e-06 45_[+1(3.82e-05)]_27 chrX:11223595-11223675 8.69e-01 80 chrI:1987503-1987583 1.61e-05 19_[+4(3.82e-05)]_30_[+4(3.82e-05)]_\ 15 chrV:20105185-20105265 9.71e-09 27_[+1(3.82e-05)]_26_[+4(3.82e-05)]_\ 3_[+5(6.61e-05)] chrX:13105511-13105591 1.40e-04 37_[+1(3.82e-05)]_35 chrIV:13375062-13375142 3.56e-03 80 chrII:2758654-2758734 9.29e-03 80 chrI:2365022-2365102 4.33e-04 80 chrI:697829-697909 1.01e-06 30_[+1(3.82e-05)]_13_[+1(3.82e-05)]_\ 21 chrIII:10819429-10819509 3.73e-03 60_[+2(7.65e-05)]_12 chrIII:2112711-2112791 3.45e-06 8_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 31_[+1(3.82e-05)]_5 chrX:5336172-5336252 9.09e-02 80 chrV:18940974-18941054 7.15e-04 80 chrI:692456-692536 4.70e-06 62_[+1(3.82e-05)]_10 chrII:13315998-13316078 6.45e-07 44_[+4(3.82e-05)]_28 chrX:5508077-5508157 1.46e-04 25_[+1(3.82e-05)]_47 chrX:15431101-15431181 3.04e-02 80 chrII:13641474-13641554 1.61e-02 80 chrI:2937068-2937148 1.76e-04 4_[+4(3.82e-05)]_33_[+4(3.82e-05)]_\ 27 chrX:16959792-16959872 5.75e-01 80 chrI:13724761-13724841 9.10e-02 80 chrV:19121253-19121333 1.13e-03 80 chrII:3064145-3064225 2.21e-06 19_[+2(3.82e-05)]_20_[+4(3.82e-05)]_\ 25 chrIV:1004878-1004958 1.67e-05 43_[+1(3.82e-05)]_1_[+3(3.82e-05)]_\ 10_[+1(3.82e-05)]_2 chrV:18993672-18993752 4.47e-06 25_[+5(6.61e-05)]_4_[+1(3.82e-05)]_\ 35 chrV:20104576-20104656 4.54e-06 38_[+4(3.82e-05)]_34 chrIII:1807677-1807757 4.19e-06 3_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 11_[+4(3.82e-05)]_11_[+4(3.82e-05)]_12 chrII:724179-724259 4.09e-05 3_[+4(3.82e-05)]_13_[+2(3.82e-05)]_\ 10_[+4(3.82e-05)]_12_[+4(3.82e-05)]_10 chrIV:15528394-15528474 1.30e-06 51_[+1(3.82e-05)]_21 chrI:1816567-1816647 8.79e-05 3_[+5(6.61e-05)]_30_[+5(6.61e-05)]_\ 31 chrI:627737-627817 2.02e-07 10_[+1(3.82e-05)]_32_[+3(3.82e-05)]_\ 22 chrI:1052009-1052089 2.24e-05 23_[+1(3.82e-05)]_49 chrI:2334883-2334963 2.89e-05 5_[+1(3.82e-05)]_10_[+1(3.82e-05)]_\ 10_[+1(3.82e-05)]_8_[+1(3.82e-05)]_15 chrII:13417614-13417694 6.26e-07 21_[+1(3.82e-05)]_20_[+1(3.82e-05)]_\ 23 chrIII:9950256-9950336 2.62e-05 56_[+4(3.82e-05)]_16 chrI:651585-651665 7.95e-05 30_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ 11_[+1(3.82e-05)]_4 chrIII:2013370-2013450 8.17e-03 80 chrII:614888-614968 3.62e-07 31_[+4(3.82e-05)]_5_[+5(9.49e-05)]_\ 28 chrII:3374015-3374095 6.91e-03 80 chrIV:17329045-17329125 6.30e-03 80 chrX:11658231-11658311 8.66e-02 80 chrIII:1965335-1965415 7.32e-07 26_[+5(7.09e-05)]_11_[+5(9.44e-06)]_\ 3_[+1(3.82e-05)]_[+5(9.44e-06)]_8 chrI:11388935-11389015 1.30e-06 26_[+1(3.82e-05)]_11_[+1(3.82e-05)]_\ 11_[+1(3.82e-05)]_8 chrIII:9272256-9272336 6.70e-04 34_[+2(3.82e-05)]_38 chrIV:2391993-2392073 5.14e-06 14_[+1(3.82e-05)]_58 chrIV:1006796-1006876 1.25e-06 16_[+1(3.82e-05)]_[+5(6.61e-05)]_48 chrII:1341769-1341849 3.42e-03 60_[+1(3.82e-05)]_12 chrV:20464989-20465069 5.53e-04 80 chrI:11385510-11385590 8.02e-05 5_[+1(3.82e-05)]_67 chrX:11511354-11511434 1.06e-04 35_[+4(3.82e-05)]_37 chrII:3291440-3291520 9.14e-03 80 chrI:12759817-12759897 4.15e-07 28_[+4(3.82e-05)]_22_[+1(3.82e-05)]_\ 14 chrIII:1085162-1085242 1.53e-07 9_[+4(3.82e-05)]_49_[+1(3.82e-05)]_\ 6 chrI:2338124-2338204 1.39e-07 41_[+1(3.82e-05)]_22_[+4(3.82e-05)]_\ 1 chrIV:14034728-14034808 1.49e-05 39_[+1(3.82e-05)]_33 chrIV:3738711-3738791 2.88e-04 35_[+5(9.44e-06)]_37 chrIV:11662583-11662663 6.14e-02 80 chrIII:11129539-11129619 2.30e-04 50_[+4(3.82e-05)]_22 chrV:19010580-19010660 5.91e-07 23_[+4(3.82e-05)]_24_[+1(3.82e-05)]_\ 17 chrIII:10120243-10120323 1.86e-04 35_[+4(3.82e-05)]_37 chrX:2261151-2261231 7.98e-04 27_[+4(3.82e-05)]_45 chrII:7061224-7061304 1.18e-03 33_[+4(3.82e-05)]_39 chrV:687687-687767 6.09e-05 14_[+4(3.82e-05)]_58 chrII:2192458-2192538 1.09e-06 19_[+1(3.82e-05)]_53 chrV:20457347-20457427 7.87e-02 80 chrI:13576496-13576576 7.66e-03 80 chrI:13806477-13806557 5.41e-07 19_[+1(3.82e-05)]_6_[+4(3.82e-05)]_\ 39 chrI:1815559-1815639 5.33e-04 80 chrIII:12395254-12395334 9.03e-03 80 chrIII:12951712-12951792 7.96e-01 80 chrIII:4301452-4301532 7.16e-02 80 chrI:1435250-1435330 7.28e-05 40_[+1(3.82e-05)]_32 chrIII:2961141-2961221 1.82e-06 7_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 3_[+3(3.82e-05)]_11_[+1(3.82e-05)]_[+5(2.81e-05)]_7 chrV:19100321-19100401 2.90e-04 80 chrIII:11710001-11710081 1.89e-04 22_[+4(3.82e-05)]_50 chrIV:8986901-8986981 1.07e-02 80 chrIII:11280079-11280159 3.30e-07 19_[+4(3.82e-05)]_13_[+1(3.82e-05)]_\ 10_[+4(3.82e-05)]_14 chrIII:2962002-2962082 8.82e-06 47_[+4(3.82e-05)]_25 chrI:353358-353438 5.12e-07 4_[+5(9.44e-06)]_10_[+5(6.61e-05)]_\ 10_[+5(9.44e-06)]_32 chrI:1816800-1816880 4.50e-06 4_[+4(3.82e-05)]_11_[+4(3.82e-05)]_\ 24_[+5(6.61e-05)]_17 chrIII:10861462-10861542 3.26e-07 34_[+4(3.82e-05)]_14_[+3(3.82e-05)]_\ 16 chrI:11533054-11533134 1.31e-04 33_[+4(3.82e-05)]_30_[+4(3.82e-05)]_\ 1 chrI:10479100-10479180 1.01e-01 80 chrIII:1584462-1584542 6.51e-05 80 chrIII:3242532-3242612 8.50e-08 8_[+1(3.82e-05)]_15_[+4(3.82e-05)]_\ 15_[+1(3.82e-05)]_18 chrI:11526066-11526146 5.00e-06 23_[+1(3.82e-05)]_49 chrI:113053-113133 2.19e-05 [+4(3.82e-05)]_72 chrV:4812673-4812753 2.63e-01 80 chrI:14506844-14506924 1.15e-03 80 chrIV:15453556-15453636 1.27e-08 10_[+1(3.82e-05)]_2_[+5(9.03e-05)]_\ 10_[+4(3.82e-05)]_34 chrX:7222503-7222583 6.07e-03 36_[+1(3.82e-05)]_36 chrII:12176625-12176705 9.85e-01 80 chrI:1448996-1449076 6.16e-06 48_[+4(3.82e-05)]_24 chrX:3802890-3802970 8.75e-04 43_[+4(3.82e-05)]_29 chrI:625261-625341 1.39e-07 6_[+1(3.82e-05)]_33_[+1(3.82e-05)]_\ 17_[+4(3.82e-05)] chrI:626041-626121 2.67e-06 37_[+5(9.03e-05)]_10_[+4(3.82e-05)]_\ 17 chrII:3070295-3070375 4.60e-05 80 chrIII:9538941-9539021 5.08e-02 37_[+2(7.65e-05)]_35 chrIII:5879454-5879534 1.44e-04 12_[+4(3.82e-05)]_60 chrV:19087603-19087683 8.34e-05 56_[+1(3.82e-05)]_16 chrI:11488169-11488249 5.14e-07 27_[+1(3.82e-05)]_45 chrI:1392940-1393020 8.17e-04 41_[+1(3.82e-05)]_31 chrIV:1437763-1437843 9.52e-06 23_[+1(3.82e-05)]_49 chrIV:1740819-1740899 7.20e-06 3_[+4(3.82e-05)]_32_[+4(3.82e-05)]_\ 29 chrIV:977963-978043 1.04e-03 80 chrIV:16049028-16049108 5.85e-02 80 chrIII:11733108-11733188 2.04e-07 6_[+5(2.81e-05)]_10_[+5(2.81e-05)]_\ 1_[+1(3.82e-05)]_39 chrI:4996084-4996164 3.02e-02 80 chrII:1500873-1500953 1.02e-04 34_[+1(3.82e-05)]_38 chrIV:7017300-7017380 1.50e-03 17_[+1(3.82e-05)]_55 chrI:647560-647640 1.42e-06 43_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 9 chrV:13819827-13819907 2.47e-03 80 chrX:11974821-11974901 7.19e-04 80 chrX:183624-183704 4.50e-06 8_[+4(3.82e-05)]_5_[+5(6.61e-05)]_\ 39_[+4(3.82e-05)]_4 chrII:2901359-2901439 8.01e-07 8_[+3(3.82e-05)]_18_[+2(3.82e-05)]_\ 22_[+4(3.82e-05)]_8 chrV:7221237-7221317 9.56e-04 60_[+2(3.82e-05)]_12 chrIII:9144074-9144154 7.14e-01 80 chrV:19073394-19073474 4.23e-06 63_[+4(3.82e-05)]_9 chrII:12394250-12394330 9.11e-06 7_[+1(3.82e-05)]_33_[+1(3.82e-05)]_\ 24 chrI:13793794-13793874 1.53e-07 54_[+1(3.82e-05)]_9_[+4(3.82e-05)]_\ 1 chrI:2380734-2380814 7.85e-08 15_[+4(3.82e-05)]_20_[+1(3.82e-05)]_\ 12_[+1(3.82e-05)]_9 chrI:14699154-14699234 2.03e-05 5_[+1(3.82e-05)]_67 chrIV:6958953-6959033 6.64e-05 20_[+4(3.82e-05)]_52 chrIII:2112914-2112994 5.25e-07 56_[+5(2.81e-05)]_16 chrV:17926337-17926417 4.45e-08 23_[+4(3.82e-05)]_49 chrV:31461-31541 6.94e-02 80 chrII:12036662-12036742 9.37e-05 4_[+4(3.82e-05)]_68 chrI:11592757-11592837 9.18e-03 69_[+1(7.65e-05)]_3 chrX:4576413-4576493 6.82e-01 80 chrX:17222284-17222364 4.13e-03 56_[+1(3.82e-05)]_16 chrII:7885007-7885087 3.82e-03 80 chrX:5121950-5122030 7.78e-02 80 chrI:627938-628018 2.02e-07 38_[+1(3.82e-05)]_34 chrIV:1727709-1727789 1.32e-05 5_[+1(3.82e-05)]_12_[+1(3.82e-05)]_\ 11_[+1(3.82e-05)]_13_[+1(3.82e-05)]_7 chrIII:2478794-2478874 1.52e-04 17_[+4(3.82e-05)]_55 chrIII:6973893-6973973 1.77e-01 80 chrX:14513612-14513692 8.28e-02 80 chrIII:5906201-5906281 3.86e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n08.farnam.hpc.yale.internal ********************************************************************************