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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.275 C 0.225 G 0.225 T 0.275 

MOTIF 1-AAKAAACC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 239 P= 5.3e-010
 0.943509 0.000185 0.045111 0.011196
 0.945557 0.000185 0.013751 0.040507
 0.000226 0.000185 0.425751 0.573839
 0.988026 0.005874 0.005874 0.000226
 0.997049 0.000185 0.002540 0.000226
 0.992567 0.000185 0.001333 0.005915
 0.000226 0.999364 0.000185 0.000226
 0.000226 0.990907 0.005874 0.002993

MOTIF 2-ACTGTGAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 83 P= 1.5e-005
 0.934073 0.020473 0.020473 0.024982
 0.024982 0.929564 0.020473 0.024982
 0.024982 0.020473 0.020473 0.934073
 0.024982 0.020473 0.929564 0.024982
 0.024982 0.020473 0.020473 0.934073
 0.024982 0.020473 0.929564 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.024982 0.020473 0.929564 0.024982

MOTIF 3-AAKCATGG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 75 P= 2.0e-003
 0.829429 0.009373 0.111277 0.049921
 0.965472 0.000533 0.033345 0.000650
 0.017056 0.000533 0.601581 0.380830
 0.010580 0.948581 0.033398 0.007442
 0.978740 0.000533 0.016939 0.003788
 0.007442 0.091614 0.016939 0.884005
 0.115070 0.000533 0.858559 0.025838
 0.094162 0.033398 0.848592 0.023848

MOTIF 4-CCCAGCCT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 78 P= 2.5e-002
 0.000736 0.997925 0.000603 0.000736
 0.000736 0.979366 0.019163 0.000736
 0.006250 0.918114 0.037722 0.037915
 0.960939 0.019163 0.000603 0.019295
 0.000736 0.019163 0.971683 0.008419
 0.029410 0.766974 0.000603 0.203013
 0.056594 0.923508 0.019163 0.000736
 0.186777 0.037782 0.075021 0.700420

MOTIF 5-AAGAAAAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 58 P= 3.7e-002
 0.934073 0.020473 0.020473 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.024982 0.020473 0.929564 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.934073 0.020473 0.020473 0.024982
 0.024982 0.020473 0.929564 0.024982

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZNF766.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZNF766/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n05.farnam.hpc.yale.internal
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FINALTIME:	2.97 seconds
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