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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.239 C 0.261 G 0.261 T 0.239 

MOTIF 1-SCACGTGS STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 77 P= 5.7e-002
 0.207876 0.462607 0.328832 0.000684
 0.000684 0.997883 0.000748 0.000684
 0.977933 0.000748 0.020635 0.000684
 0.000684 0.696724 0.000748 0.301844
 0.301844 0.000748 0.696724 0.000684
 0.000684 0.020635 0.000748 0.977933
 0.000684 0.000748 0.997883 0.000684
 0.000684 0.328832 0.462607 0.207876

MOTIF 2-AGGAAGGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 42 P= 1.2e-001
 0.793736 0.068645 0.001267 0.136352
 0.001159 0.001267 0.996414 0.001159
 0.102390 0.001267 0.895184 0.001159
 0.895076 0.102498 0.001267 0.001159
 0.962672 0.034902 0.001267 0.001159
 0.068538 0.001267 0.929036 0.001159
 0.001159 0.169665 0.828017 0.001159
 0.742981 0.001267 0.119400 0.136352

MOTIF 3-ATGGAGTC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 55 P= 3.0e-001
 0.997188 0.000965 0.000965 0.000883
 0.080831 0.000965 0.000965 0.917239
 0.000883 0.000965 0.997270 0.000883
 0.000883 0.052275 0.843422 0.103420
 0.997188 0.000965 0.000965 0.000883
 0.157754 0.026579 0.789171 0.026497
 0.000883 0.000965 0.000965 0.997188
 0.000883 0.856074 0.000965 0.142078

MOTIF 4-GACATARG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 5.0e-001
 0.052501 0.001912 0.943838 0.001749
 0.994427 0.001912 0.001912 0.001749
 0.022759 0.922829 0.052663 0.001749
 0.943676 0.052663 0.001912 0.001749
 0.001749 0.001912 0.001912 0.994427
 0.892761 0.001912 0.001912 0.103416
 0.480178 0.052663 0.465409 0.001749
 0.052501 0.001912 0.943838 0.001749

MOTIF 5-AAGGCAGA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 7.6e-001
 0.930809 0.023736 0.023736 0.021718
 0.930809 0.023736 0.023736 0.021718
 0.021718 0.023736 0.932827 0.021718
 0.021718 0.023736 0.932827 0.021718
 0.021718 0.932827 0.023736 0.021718
 0.930809 0.023736 0.023736 0.021718
 0.021718 0.023736 0.932827 0.021718
 0.930809 0.023736 0.023736 0.021718

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZNF592.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZNF592/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n02.farnam.hpc.yale.internal
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FINALTIME:	1.69 seconds
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