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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.275 C 0.225 G 0.225 T 0.275 

MOTIF 1-CTGAAATC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 87 P= 1.9e-002
 0.076608 0.634734 0.000525 0.288134
 0.000643 0.032908 0.000525 0.965924
 0.000643 0.000525 0.998189 0.000643
 0.798090 0.127776 0.000525 0.073609
 0.965924 0.000525 0.032908 0.000643
 0.949681 0.000525 0.049151 0.000643
 0.000643 0.000525 0.000525 0.998307
 0.140945 0.857887 0.000525 0.000643

MOTIF 2-AATTGCTA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 66 P= 2.5e-002
 0.986094 0.006657 0.000483 0.006766
 0.990405 0.000483 0.000483 0.008628
 0.006766 0.027796 0.015397 0.950041
 0.015506 0.000483 0.003336 0.980675
 0.075765 0.000483 0.923159 0.000593
 0.003445 0.914255 0.006657 0.075643
 0.000593 0.000483 0.000483 0.998441
 0.883880 0.000483 0.000483 0.115154

MOTIF 3-ACTGGTCC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 5.0e-001
 0.996892 0.000963 0.000963 0.001181
 0.001181 0.924553 0.000963 0.073302
 0.030912 0.000963 0.000963 0.967161
 0.030912 0.000963 0.954636 0.013489
 0.120680 0.000963 0.877175 0.001181
 0.013489 0.000963 0.000963 0.984585
 0.001181 0.996674 0.000963 0.001181
 0.030912 0.966944 0.000963 0.001181

MOTIF 4-GTTTTGAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 5.0e-001
 0.001299 0.198803 0.798599 0.001299
 0.001299 0.099452 0.001059 0.898190
 0.001299 0.066549 0.033751 0.898401
 0.014832 0.001059 0.033751 0.950357
 0.066683 0.001059 0.001059 0.931198
 0.033991 0.001059 0.963651 0.001299
 0.767106 0.001059 0.099452 0.132383
 0.983049 0.014593 0.001059 0.001299

MOTIF 5-CATAGCAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 7.6e-001
 0.001603 0.792513 0.001307 0.204577
 0.955450 0.001307 0.001307 0.041936
 0.001603 0.001307 0.001307 0.995784
 0.995784 0.001307 0.001307 0.001603
 0.082400 0.001307 0.914691 0.001603
 0.001603 0.914691 0.001307 0.082400
 0.914986 0.082104 0.001307 0.001603
 0.122994 0.122698 0.730973 0.023335

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZNF584.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZNF584/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n08.farnam.hpc.yale.internal
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FINALTIME:	2.79 seconds
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