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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.345 C 0.155 G 0.155 T 0.345 

MOTIF 1-CATTTACA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 208 P= 5.8e-009
 0.000267 0.991826 0.000119 0.007788
 0.974651 0.002333 0.021564 0.001451
 0.002041 0.032469 0.011638 0.953852
 0.001707 0.000119 0.001560 0.996613
 0.000267 0.013869 0.000119 0.985746
 0.994399 0.001560 0.002333 0.001707
 0.000267 0.878236 0.000119 0.121378
 0.965687 0.010833 0.022654 0.000826

MOTIF 2-ATTAAAAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 143 P= 1.0e-004
 0.999207 0.000187 0.000187 0.000418
 0.000418 0.042446 0.022771 0.934365
 0.000418 0.106892 0.003663 0.889026
 0.997601 0.000187 0.001793 0.000418
 0.998831 0.000187 0.000187 0.000794
 0.999207 0.000187 0.000187 0.000418
 0.990810 0.008585 0.000187 0.000418
 0.000418 0.000187 0.998976 0.000418

MOTIF 3-TAACAATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 96 P= 1.8e-003
 0.000727 0.000326 0.014924 0.984023
 0.984023 0.014924 0.000326 0.000727
 0.757391 0.044263 0.004259 0.194088
 0.000727 0.998219 0.000326 0.000727
 0.957838 0.000326 0.014924 0.026913
 0.998621 0.000326 0.000326 0.000727
 0.000727 0.000326 0.000326 0.998621
 0.998621 0.000326 0.000326 0.000727

MOTIF 4-ACATTAAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 145 P= 1.3e-002
 0.999117 0.000209 0.000209 0.000466
 0.000466 0.998860 0.000209 0.000466
 0.594841 0.265288 0.009558 0.130313
 0.022857 0.039322 0.000209 0.937612
 0.000466 0.000209 0.000209 0.999117
 0.965732 0.000209 0.033594 0.000466
 0.999117 0.000209 0.000209 0.000466
 0.999117 0.000209 0.000209 0.000466

MOTIF 5-CAGACTGG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 112 P= 1.9e-002
 0.020044 0.944360 0.023444 0.012151
 0.975758 0.011833 0.000258 0.012151
 0.012245 0.000258 0.986920 0.000577
 0.950119 0.011851 0.037453 0.000577
 0.057069 0.879408 0.046668 0.016855
 0.001095 0.011833 0.000258 0.986814
 0.094229 0.000258 0.900144 0.005368
 0.094229 0.016624 0.886356 0.002791

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZNF507.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZNF507/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n07.farnam.hpc.yale.internal
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FINALTIME:	1.29 seconds
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