********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.288 C 0.211 G 0.211 T 0.288 

MOTIF 1-GAGAAACC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 167 P= 5.1e-005
 0.000307 0.000225 0.999161 0.000307
 0.999243 0.000225 0.000225 0.000307
 0.093457 0.000225 0.906011 0.000307
 0.999243 0.000225 0.000225 0.000307
 0.954612 0.000225 0.044855 0.000307
 0.673489 0.247791 0.078413 0.000307
 0.000307 0.789689 0.000225 0.209779
 0.000307 0.999161 0.000225 0.000307

MOTIF 2-AYACTGGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 83 P= 8.2e-004
 0.998216 0.000530 0.000530 0.000723
 0.000723 0.535022 0.000530 0.463724
 0.998216 0.000530 0.000530 0.000723
 0.000723 0.998023 0.000530 0.000723
 0.000723 0.025100 0.062577 0.911600
 0.000723 0.000530 0.998023 0.000723
 0.000723 0.000530 0.998023 0.000723
 0.712078 0.000530 0.134530 0.152863

MOTIF 3-CATTCATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 133 P= 1.2e-002
 0.269302 0.694142 0.036178 0.000378
 0.999067 0.000277 0.000277 0.000378
 0.000378 0.000277 0.000277 0.999067
 0.000378 0.067940 0.068399 0.863283
 0.000378 0.738158 0.000277 0.261186
 0.931295 0.000277 0.068049 0.000378
 0.000378 0.000277 0.000277 0.999067
 0.999067 0.000277 0.000277 0.000378

MOTIF 4-CCACATTC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 95 P= 2.4e-002
 0.000596 0.998372 0.000437 0.000596
 0.000596 0.998372 0.000437 0.000596
 0.955329 0.000437 0.043639 0.000596
 0.000596 0.998372 0.000437 0.000596
 0.998531 0.000437 0.000437 0.000596
 0.043589 0.000437 0.038917 0.917057
 0.000596 0.043430 0.000437 0.955538
 0.000596 0.998372 0.000437 0.000596

MOTIF 5-AARGCYTT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 95 P= 1.2e-001
 0.998844 0.000344 0.000344 0.000469
 0.998844 0.000344 0.000344 0.000469
 0.569029 0.000344 0.430158 0.000469
 0.000469 0.000344 0.934558 0.064629
 0.064629 0.934558 0.000344 0.000469
 0.000469 0.430158 0.000344 0.569029
 0.000469 0.000344 0.000344 0.998844
 0.000469 0.000344 0.000344 0.998844

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZNF274.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZNF274/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c17n10.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	1.59 seconds
********************************************************************************