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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.255 C 0.245 G 0.245 T 0.255 

MOTIF 1-TAATCAAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 164 P= 2.9e-004
 0.015438 0.161773 0.000294 0.822494
 0.917453 0.000294 0.071859 0.010394
 0.911589 0.000294 0.071149 0.016968
 0.008623 0.017938 0.004453 0.968986
 0.000306 0.999094 0.000294 0.000306
 0.683385 0.020471 0.172134 0.124009
 0.999106 0.000294 0.000294 0.000306
 0.015438 0.095906 0.033725 0.854930

MOTIF 2-CAGACATY STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 141 P= 4.5e-004
 0.015026 0.971968 0.003928 0.009078
 0.986699 0.000309 0.009051 0.003941
 0.000321 0.009051 0.990306 0.000321
 0.999060 0.000309 0.000309 0.000321
 0.000321 0.985541 0.000309 0.013828
 0.994350 0.000309 0.000309 0.005032
 0.009064 0.017794 0.000309 0.972833
 0.059611 0.309690 0.191001 0.439698

MOTIF 3-CTCTTTCC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 115 P= 9.3e-003
 0.026101 0.693971 0.165871 0.114057
 0.073326 0.029752 0.000453 0.896469
 0.115970 0.742366 0.083894 0.057771
 0.000471 0.190203 0.000453 0.808873
 0.000471 0.022533 0.000453 0.976542
 0.013286 0.022533 0.031540 0.932641
 0.000471 0.784293 0.038939 0.176297
 0.000471 0.825794 0.013268 0.160466

MOTIF 4-GAACCCAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 44 P= 1.7e-001
 0.029558 0.029529 0.899416 0.041498
 0.855471 0.092124 0.031282 0.021123
 0.688557 0.021095 0.207806 0.082542
 0.021123 0.910795 0.046958 0.021123
 0.021123 0.860355 0.068524 0.049997
 0.041498 0.805914 0.111091 0.041498
 0.793937 0.041469 0.123097 0.041498
 0.009183 0.082283 0.899350 0.009183

MOTIF 5-CCATGRGT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 3.0e-001
 0.026387 0.971777 0.000900 0.000936
 0.000936 0.918455 0.000900 0.079709
 0.997264 0.000900 0.000900 0.000936
 0.000936 0.098408 0.029439 0.871217
 0.000936 0.051803 0.775435 0.171826
 0.369192 0.026351 0.603520 0.000936
 0.000936 0.000900 0.997228 0.000936
 0.130635 0.208078 0.000900 0.660387

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZMIZ1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZMIZ1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n09.farnam.hpc.yale.internal
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FINALTIME:	4.18 seconds
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