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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.275 C 0.225 G 0.225 T 0.275 

MOTIF 1-ATCCCAGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 67 P= 1.6e-001
 0.854031 0.000582 0.144677 0.000710
 0.000710 0.311997 0.000582 0.686711
 0.018619 0.813525 0.000582 0.167274
 0.008124 0.782786 0.000582 0.208508
 0.000710 0.944271 0.000582 0.054437
 0.872590 0.054367 0.054424 0.018619
 0.039371 0.000582 0.959337 0.000710
 0.000710 0.997998 0.000582 0.000710

MOTIF 2-AAWACAAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 2.4e-001
 0.996232 0.001170 0.001170 0.001428
 0.996232 0.001170 0.001170 0.001428
 0.415621 0.001170 0.001170 0.582039
 0.996232 0.001170 0.001170 0.001428
 0.001428 0.995975 0.001170 0.001428
 0.923978 0.001170 0.073424 0.001428
 0.996232 0.001170 0.001170 0.001428
 0.996232 0.001170 0.001170 0.001428

MOTIF 3-AGACGGGG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.961871 0.001121 0.035639 0.001368
 0.001368 0.035639 0.961624 0.001368
 0.961871 0.035639 0.001121 0.001368
 0.001368 0.938084 0.001121 0.059426
 0.112292 0.001121 0.885219 0.001368
 0.035886 0.035639 0.892532 0.035942
 0.199799 0.035639 0.763193 0.001368
 0.001368 0.001121 0.961624 0.035886

MOTIF 4-CATGGTGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 8.8e-001
 0.001560 0.916801 0.001278 0.080362
 0.877490 0.001278 0.119672 0.001560
 0.001560 0.080080 0.001278 0.917082
 0.040897 0.001278 0.956265 0.001560
 0.080362 0.001278 0.877463 0.040897
 0.001560 0.040616 0.001278 0.956547
 0.001560 0.001278 0.995603 0.001560
 0.995884 0.001278 0.001278 0.001560

MOTIF 5-CGCCTGTA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.0e+000
 0.034166 0.731824 0.033931 0.200080
 0.133391 0.001068 0.864238 0.001303
 0.001303 0.963464 0.033931 0.001303
 0.001303 0.963464 0.001068 0.034166
 0.001303 0.033931 0.001068 0.963699
 0.001303 0.033931 0.963464 0.001303
 0.001303 0.033931 0.033931 0.930836
 0.996562 0.001068 0.001068 0.001303

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZC3H8.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZC3H8/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n09.farnam.hpc.yale.internal
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FINALTIME:	1.56 seconds
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