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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.148 C 0.352 G 0.352 T 0.148 

MOTIF 1-CGRGGGTC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 95 P= 6.4e-002
 0.000560 0.742631 0.001326 0.255484
 0.000560 0.215136 0.783744 0.000560
 0.329202 0.001326 0.658092 0.011380
 0.000560 0.001326 0.997555 0.000560
 0.026698 0.001326 0.971416 0.000560
 0.000560 0.001326 0.997555 0.000560
 0.000560 0.001326 0.001326 0.996789
 0.064962 0.823347 0.111131 0.000560

MOTIF 2-WGGGGKCG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 197 P= 6.7e-001
 0.519328 0.010511 0.130469 0.339693
 0.000266 0.005777 0.993691 0.000266
 0.000266 0.000631 0.998837 0.000266
 0.000266 0.120706 0.732892 0.146136
 0.000266 0.000631 0.998837 0.000266
 0.000266 0.000631 0.473805 0.525298
 0.000266 0.993483 0.000631 0.005621
 0.172516 0.000631 0.635348 0.191506

MOTIF 3-CAGAACAT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 7.6e-001
 0.001511 0.993400 0.003579 0.001511
 0.920776 0.003579 0.074134 0.001511
 0.001511 0.003579 0.993400 0.001511
 0.849994 0.144917 0.003579 0.001511
 0.991332 0.003579 0.003579 0.001511
 0.001511 0.993400 0.003579 0.001511
 0.637645 0.144917 0.003579 0.213859
 0.213859 0.003579 0.144917 0.637645

MOTIF 4-AGGACGCC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 7.6e-001
 0.620506 0.064367 0.302099 0.013029
 0.062571 0.064367 0.871751 0.001312
 0.062571 0.003107 0.933010 0.001312
 0.889439 0.003107 0.003107 0.104346
 0.001312 0.994270 0.003107 0.001312
 0.001312 0.003107 0.994270 0.001312
 0.001312 0.845665 0.151711 0.001312
 0.062571 0.871751 0.064367 0.001312

MOTIF 5-AGATGGCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 1.0e+000
 0.992427 0.003127 0.003127 0.001320
 0.001320 0.003127 0.994234 0.001320
 0.992427 0.003127 0.003127 0.001320
 0.001320 0.003127 0.313820 0.681734
 0.001320 0.003127 0.932596 0.062958
 0.062958 0.064765 0.870957 0.001320
 0.001320 0.994234 0.003127 0.001320
 0.744678 0.003127 0.250876 0.001320

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZBTB7A.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZBTB7A/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n01.farnam.hpc.yale.internal
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FINALTIME:	1.34 seconds
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