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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.246 C 0.254 G 0.254 T 0.246 

MOTIF 1-TCYAGGAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 2.4e-001
 0.002145 0.002206 0.002206 0.993443
 0.002145 0.993504 0.002206 0.002145
 0.002145 0.593326 0.002206 0.402323
 0.891989 0.002206 0.103660 0.002145
 0.002145 0.002206 0.993504 0.002145
 0.002145 0.002206 0.993504 0.002145
 0.993443 0.002206 0.002206 0.002145
 0.993443 0.002206 0.002206 0.002145

MOTIF 2-CGGACCKA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.063079 0.903802 0.001130 0.031989
 0.001099 0.032020 0.965783 0.001099
 0.031989 0.032020 0.934892 0.001099
 0.996642 0.001130 0.001130 0.001099
 0.001099 0.996673 0.001130 0.001099
 0.001099 0.965783 0.001130 0.031989
 0.125260 0.151900 0.471796 0.251044
 0.897863 0.032120 0.007038 0.062979

MOTIF 3-AGGCAGAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 58 P= 6.7e-001
 0.897044 0.000661 0.101652 0.000643
 0.113528 0.073007 0.776649 0.036816
 0.000643 0.000661 0.829179 0.169516
 0.000643 0.958971 0.000661 0.039725
 0.543654 0.000661 0.238807 0.216877
 0.149827 0.000661 0.728016 0.121496
 0.810957 0.000661 0.105093 0.083288
 0.038506 0.000661 0.880731 0.080101

MOTIF 4-AAGTAATR STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 7.6e-001
 0.953385 0.001538 0.001538 0.043540
 0.953385 0.001538 0.043582 0.001495
 0.085856 0.001538 0.911111 0.001495
 0.001495 0.001538 0.001538 0.995429
 0.911205 0.085762 0.001538 0.001495
 0.974407 0.001538 0.001538 0.022518
 0.001495 0.043582 0.128078 0.826844
 0.485822 0.043582 0.298723 0.171872

MOTIF 5-CCTGCCCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 1.0e+000
 0.022409 0.932136 0.023045 0.022409
 0.022409 0.932136 0.023045 0.022409
 0.022409 0.023045 0.023045 0.931500
 0.022409 0.023045 0.932136 0.022409
 0.022409 0.932136 0.023045 0.022409
 0.022409 0.932136 0.023045 0.022409
 0.022409 0.932136 0.023045 0.022409
 0.931500 0.023045 0.023045 0.022409

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZBTB5.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZBTB5/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n04.farnam.hpc.yale.internal
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FINALTIME:	1.64 seconds
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