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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.295 C 0.205 G 0.205 T 0.295 

MOTIF 1-AACTTTAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 235 P= 2.1e-013
 0.935900 0.018645 0.018645 0.026809
 0.935900 0.018645 0.018645 0.026809
 0.026809 0.927736 0.018645 0.026809
 0.026809 0.018645 0.018645 0.935900
 0.026809 0.018645 0.018645 0.935900
 0.026809 0.018645 0.018645 0.935900
 0.935900 0.018645 0.018645 0.026809
 0.026809 0.018645 0.018645 0.935900

MOTIF 2-TCCAATAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 206 P= 1.1e-009
 0.013865 0.021516 0.116283 0.848336
 0.000226 0.815845 0.005462 0.178467
 0.000226 0.927392 0.002353 0.070029
 0.994155 0.000157 0.005462 0.000226
 0.999460 0.000157 0.000157 0.000226
 0.000226 0.000157 0.000157 0.999460
 0.999460 0.000157 0.000157 0.000226
 0.994155 0.000157 0.005462 0.000226

MOTIF 3-ACACAGCC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 125 P= 1.5e-005
 0.992346 0.000354 0.000354 0.006947
 0.000508 0.998630 0.000354 0.000508
 0.948161 0.022094 0.024291 0.005455
 0.000508 0.947902 0.000354 0.051236
 0.933606 0.000354 0.005300 0.060740
 0.012458 0.014200 0.943847 0.029495
 0.007755 0.861348 0.000354 0.130543
 0.000508 0.998630 0.000354 0.000508

MOTIF 4-RAAAGCAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 157 P= 1.1e-003
 0.579449 0.030783 0.389356 0.000411
 0.893446 0.016450 0.089693 0.000411
 0.995013 0.000286 0.004289 0.000411
 0.950385 0.000286 0.029484 0.019845
 0.279352 0.000286 0.688850 0.031511
 0.010081 0.979551 0.000286 0.010081
 0.989346 0.000286 0.009956 0.000411
 0.000411 0.000286 0.998891 0.000411

MOTIF 5-CCATAGAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 122 P= 9.0e-003
 0.011181 0.930740 0.011025 0.047054
 0.000456 0.919154 0.021733 0.058658
 0.878396 0.052048 0.053960 0.015596
 0.000456 0.142062 0.054064 0.803419
 0.905832 0.032440 0.043426 0.018302
 0.026431 0.021767 0.940639 0.011163
 0.907687 0.005671 0.011025 0.075618
 0.004888 0.803625 0.009182 0.182305

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ZBTB40.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ZBTB40/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n10.farnam.hpc.yale.internal
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FINALTIME:	2.77 seconds
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