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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.136 C 0.364 G 0.364 T 0.136 

MOTIF 1-CCCCGCCC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 130 P= 7.8e-004
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.033127 0.942218 0.012327
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.942218 0.033127 0.012327
 0.012327 0.942218 0.033127 0.012327

MOTIF 2-CCCCCACC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 52 P= 6.5e-001
 0.001128 0.994713 0.003031 0.001128
 0.141005 0.854836 0.003031 0.001128
 0.098111 0.689571 0.211189 0.001128
 0.001128 0.994713 0.003031 0.001128
 0.001128 0.872675 0.020162 0.106035
 0.992809 0.003031 0.003031 0.001128
 0.001128 0.994713 0.003031 0.001128
 0.001128 0.994713 0.003031 0.001128

MOTIF 3-CTCCTCCC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 100 P= 7.2e-001
 0.006007 0.925562 0.051147 0.017284
 0.052951 0.103540 0.111644 0.731865
 0.010803 0.966529 0.002608 0.020060
 0.000487 0.860819 0.136258 0.002436
 0.059905 0.001310 0.017329 0.921456
 0.025406 0.896280 0.055102 0.023211
 0.100644 0.868539 0.003360 0.027456
 0.015798 0.914302 0.037953 0.031948

MOTIF 4-ACAACAAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.0e+000
 0.748540 0.198885 0.051615 0.000959
 0.000959 0.848391 0.100653 0.049997
 0.875352 0.121110 0.002578 0.000959
 0.924547 0.022878 0.051615 0.000959
 0.000959 0.897429 0.100653 0.000959
 0.797577 0.198885 0.002578 0.000959
 0.797735 0.002578 0.051615 0.148071
 0.679361 0.268065 0.002578 0.049997

MOTIF 5-AGATAAGT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.891987 0.025874 0.032496 0.049643
 0.025062 0.085252 0.864624 0.025062
 0.670478 0.050455 0.155402 0.123665
 0.000481 0.124238 0.060710 0.814571
 0.677220 0.148938 0.148780 0.025062
 0.937596 0.050455 0.011468 0.000481
 0.109021 0.099617 0.717097 0.074264
 0.049643 0.075076 0.060670 0.814611

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/VEZF1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_VEZF1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n12.farnam.hpc.yale.internal
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FINALTIME:	1.56 seconds
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