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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.207 C 0.293 G 0.293 T 0.207 

MOTIF 1-CGCCMCCT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 94 P= 5.3e-003
 0.000553 0.693086 0.000784 0.305578
 0.000553 0.090364 0.908530 0.000553
 0.000553 0.979587 0.019308 0.000553
 0.000553 0.971918 0.026976 0.000553
 0.622760 0.353435 0.023252 0.000553
 0.000553 0.769455 0.000784 0.229209
 0.008221 0.982774 0.000784 0.008221
 0.031709 0.019308 0.122510 0.826473

MOTIF 2-ATCTTAGW STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 5.0e-001
 0.992447 0.002792 0.002792 0.001969
 0.001969 0.068795 0.002792 0.926443
 0.001969 0.993270 0.002792 0.001969
 0.001969 0.068795 0.002792 0.926443
 0.133976 0.002792 0.002792 0.860440
 0.992447 0.002792 0.002792 0.001969
 0.133976 0.134799 0.663252 0.067973
 0.266196 0.068795 0.134799 0.530210

MOTIF 3-CAGGGACA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 8.3e-001
 0.044648 0.778390 0.045188 0.131775
 0.821204 0.088681 0.088821 0.001293
 0.014173 0.025194 0.915986 0.044648
 0.001293 0.088681 0.885372 0.024653
 0.001293 0.001834 0.995579 0.001293
 0.849292 0.001834 0.001834 0.147040
 0.001293 0.995579 0.001834 0.001293
 0.977092 0.001834 0.019781 0.001293

MOTIF 4-AGTTCCCA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 1.0e+000
 0.962949 0.001406 0.034653 0.000992
 0.000992 0.068007 0.709440 0.221561
 0.034239 0.001406 0.001406 0.962949
 0.000992 0.034653 0.023571 0.940784
 0.000992 0.945449 0.034653 0.018906
 0.000992 0.963363 0.034653 0.000992
 0.000992 0.896548 0.101468 0.000992
 0.829533 0.001406 0.068007 0.101054

MOTIF 5-AATCCTCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 1.0e+000
 0.835686 0.095171 0.021228 0.047915
 0.928889 0.021228 0.048495 0.001388
 0.047989 0.048495 0.141998 0.761519
 0.047915 0.855676 0.048495 0.047915
 0.001388 0.948729 0.048495 0.001388
 0.024651 0.095171 0.001968 0.878210
 0.001388 0.855527 0.095171 0.047915
 0.948149 0.001968 0.048495 0.001388

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/SUZ12.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_SUZ12/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n06.farnam.hpc.yale.internal
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FINALTIME:	1.59 seconds
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