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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.205 C 0.295 G 0.295 T 0.205 

MOTIF 1-CCTTCTCC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 1.2e-001
 0.001127 0.996121 0.001624 0.001127
 0.288536 0.632307 0.078029 0.001127
 0.116106 0.001624 0.039765 0.842505
 0.001127 0.001624 0.001624 0.995625
 0.001127 0.996121 0.001624 0.001127
 0.001127 0.001624 0.078029 0.919220
 0.008423 0.988826 0.001624 0.001127
 0.001127 0.980332 0.017413 0.001127

MOTIF 2-CCAGCTAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 2.4e-001
 0.000942 0.964896 0.033220 0.000942
 0.032805 0.901067 0.065186 0.000942
 0.929562 0.014547 0.054949 0.000942
 0.000942 0.033220 0.951706 0.014132
 0.032805 0.791357 0.161706 0.014132
 0.000942 0.001357 0.097255 0.900446
 0.996345 0.001357 0.001357 0.000942
 0.000942 0.900861 0.001357 0.096840

MOTIF 3-GCCDCCAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 67 P= 5.0e-001
 0.023662 0.000978 0.974680 0.000679
 0.069739 0.928604 0.000978 0.000679
 0.023662 0.674246 0.000978 0.301113
 0.244535 0.070149 0.260524 0.424792
 0.000679 0.902722 0.000978 0.095620
 0.023662 0.974680 0.000978 0.000679
 0.997364 0.000978 0.000978 0.000679
 0.000679 0.997663 0.000978 0.000679

MOTIF 4-CATGGCGG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 5.0e-001
 0.001653 0.672763 0.323930 0.001653
 0.993584 0.002381 0.002381 0.001653
 0.001653 0.002381 0.002381 0.993584
 0.001653 0.002381 0.964173 0.031792
 0.057588 0.002381 0.915222 0.024809
 0.001653 0.994312 0.002381 0.001653
 0.001653 0.114431 0.882262 0.001653
 0.169999 0.002381 0.770031 0.057588

MOTIF 5-SCAWGATT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 1.0e+000
 0.001391 0.333069 0.522831 0.142710
 0.001391 0.948159 0.049059 0.001391
 0.994602 0.002003 0.002003 0.001391
 0.663688 0.002003 0.002003 0.332305
 0.001391 0.002003 0.995215 0.001391
 0.947547 0.002003 0.049059 0.001391
 0.001391 0.049059 0.002003 0.947547
 0.001391 0.002003 0.002003 0.994602

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/SUPT5H.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_SUPT5H/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n10.farnam.hpc.yale.internal
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FINALTIME:	1.58 seconds
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