********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.136 C 0.364 G 0.364 T 0.136 

MOTIF 1-ATGGCGGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 9.5e-002
 0.914310 0.001289 0.001289 0.083112
 0.000484 0.055305 0.001289 0.942922
 0.000484 0.001289 0.973165 0.025062
 0.000484 0.001289 0.973165 0.025062
 0.000484 0.981358 0.001289 0.016869
 0.041824 0.075383 0.810341 0.072452
 0.038457 0.025868 0.861376 0.074299
 0.000484 0.874374 0.001289 0.123853

MOTIF 2-ACCTGCAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 9.5e-002
 0.912820 0.043186 0.002152 0.041841
 0.000807 0.979246 0.019139 0.000807
 0.000807 0.955199 0.043186 0.000807
 0.000807 0.010001 0.043186 0.946005
 0.000807 0.043186 0.955199 0.000807
 0.000807 0.790667 0.125651 0.082875
 0.730417 0.101693 0.167083 0.000807
 0.742013 0.019139 0.238040 0.000807

MOTIF 3-AGACGCCG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 74 P= 2.6e-001
 0.846267 0.042505 0.042505 0.068723
 0.017514 0.023879 0.957812 0.000795
 0.804064 0.089052 0.065638 0.041246
 0.041181 0.847590 0.042505 0.068723
 0.000795 0.070047 0.928364 0.000795
 0.017514 0.876909 0.023879 0.081698
 0.041181 0.952197 0.005827 0.000795
 0.081698 0.042505 0.858283 0.017514

MOTIF 4-GCCCCGGC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 67 P= 5.0e-001
 0.201850 0.001790 0.795689 0.000671
 0.145495 0.852044 0.001790 0.000671
 0.000671 0.996868 0.001790 0.000671
 0.034786 0.962753 0.001790 0.000671
 0.000671 0.996868 0.001790 0.000671
 0.000671 0.023111 0.975546 0.000671
 0.002371 0.001790 0.938588 0.057252
 0.000671 0.724221 0.224433 0.050674

MOTIF 5-AGGTGAGC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 86 P= 9.1e-001
 0.885972 0.024860 0.065546 0.023622
 0.000744 0.001982 0.996530 0.000744
 0.038535 0.039774 0.920947 0.000744
 0.000744 0.077687 0.001982 0.919587
 0.114484 0.001982 0.844999 0.038535
 0.843760 0.039774 0.115723 0.000744
 0.000744 0.039774 0.958739 0.000744
 0.038535 0.724888 0.154439 0.082138

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/SIN3B.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_SIN3B/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c22n08.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	1.77 seconds
********************************************************************************