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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.218 C 0.282 G 0.282 T 0.218 

MOTIF 1-ACTTCTGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 1.1e-002
 0.996619 0.001218 0.001218 0.000944
 0.000944 0.996893 0.001218 0.000944
 0.000944 0.001218 0.031199 0.966639
 0.000944 0.001218 0.001218 0.996619
 0.000944 0.894252 0.013629 0.091175
 0.000944 0.001218 0.001218 0.996619
 0.121446 0.001218 0.846411 0.030924
 0.091175 0.876586 0.001218 0.031021

MOTIF 2-GGACATCC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 48 P= 1.1e-002
 0.000862 0.028468 0.969809 0.000862
 0.012186 0.001112 0.958485 0.028217
 0.815427 0.001112 0.001112 0.182350
 0.000862 0.969809 0.001112 0.028217
 0.996915 0.001112 0.001112 0.000862
 0.088770 0.001112 0.001112 0.909007
 0.000862 0.887033 0.001112 0.110994
 0.028217 0.915097 0.028468 0.028217

MOTIF 3-AGCCCTCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 2.1e-001
 0.996025 0.001433 0.001433 0.001110
 0.001110 0.001433 0.996347 0.001110
 0.001110 0.996347 0.001433 0.001110
 0.001110 0.996347 0.001433 0.001110
 0.001110 0.996347 0.001433 0.001110
 0.001110 0.001433 0.001433 0.996025
 0.036415 0.890433 0.001433 0.071720
 0.925415 0.001433 0.072042 0.001110

MOTIF 4-GKAGCTMC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 2.4e-001
 0.019845 0.025609 0.934700 0.019845
 0.019845 0.025609 0.480155 0.474391
 0.928936 0.025609 0.025609 0.019845
 0.019845 0.025609 0.934700 0.019845
 0.019845 0.934700 0.025609 0.019845
 0.019845 0.025609 0.025609 0.928936
 0.474391 0.480155 0.025609 0.019845
 0.019845 0.934700 0.025609 0.019845

MOTIF 5-AGAGGTTC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 5.0e-001
 0.996332 0.001322 0.001322 0.001024
 0.033553 0.033851 0.931572 0.001024
 0.916248 0.002778 0.014788 0.066186
 0.066186 0.033851 0.833777 0.066186
 0.001024 0.001322 0.931467 0.066186
 0.001024 0.001322 0.001322 0.996332
 0.001024 0.001322 0.001322 0.996332
 0.066186 0.898939 0.033851 0.001024

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/SETDB1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_SETDB1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n01.farnam.hpc.yale.internal
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FINALTIME:	1.38 seconds
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