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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.263 C 0.237 G 0.237 T 0.263 

MOTIF 1-AATCACAG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 127 P= 5.3e-003
 0.991416 0.007394 0.000563 0.000627
 0.948003 0.017064 0.026056 0.008877
 0.045003 0.061855 0.008813 0.884328
 0.002142 0.992628 0.004603 0.000627
 0.785970 0.028316 0.017064 0.168651
 0.142447 0.839863 0.000563 0.017127
 0.792248 0.000563 0.017064 0.190125
 0.017127 0.017064 0.958351 0.007458

MOTIF 2-YAGATAAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 99 P= 5.7e-002
 0.112001 0.397932 0.167411 0.322657
 0.741135 0.000474 0.000474 0.257917
 0.000528 0.000474 0.998470 0.000528
 0.998523 0.000474 0.000474 0.000528
 0.000528 0.043866 0.000474 0.955132
 0.926846 0.000474 0.044317 0.028362
 0.893554 0.000474 0.105444 0.000528
 0.159466 0.073632 0.751940 0.014962

MOTIF 3-AAATCAGT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 83 P= 6.9e-002
 0.737935 0.031952 0.149619 0.080493
 0.979402 0.000636 0.000636 0.019327
 0.960783 0.019255 0.000636 0.019327
 0.000708 0.069221 0.019255 0.910817
 0.000708 0.942091 0.037874 0.019327
 0.675990 0.056494 0.056494 0.211022
 0.000708 0.066994 0.922281 0.010017
 0.039520 0.000636 0.113492 0.846353

MOTIF 4-CTTCCTCC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 53 P= 3.3e-001
 0.061385 0.930694 0.001027 0.006895
 0.152479 0.052842 0.061268 0.733410
 0.091651 0.039888 0.001027 0.867434
 0.013592 0.843004 0.051607 0.091798
 0.001143 0.984239 0.001027 0.013592
 0.001143 0.006778 0.031099 0.960980
 0.061385 0.936446 0.001027 0.001143
 0.152479 0.764473 0.001027 0.082021

MOTIF 5-CATATGCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 5.0e-001
 0.001660 0.907799 0.045186 0.045355
 0.951662 0.001491 0.045186 0.001660
 0.177284 0.089020 0.107486 0.626209
 0.925217 0.009849 0.019579 0.045355
 0.001660 0.088880 0.045186 0.864274
 0.045355 0.001491 0.907799 0.045355
 0.089190 0.820270 0.045186 0.045355
 0.089189 0.045327 0.088880 0.776604

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/RCOR1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_RCOR1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n02.farnam.hpc.yale.internal
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FINALTIME:	1.74 seconds
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