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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.263 C 0.237 G 0.237 T 0.263 

MOTIF 1-TCAAAAAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 5.0e-001
 0.002701 0.002442 0.002442 0.992415
 0.002701 0.992156 0.002442 0.002701
 0.962902 0.002442 0.031956 0.002701
 0.992415 0.002442 0.002442 0.002701
 0.720587 0.202975 0.002442 0.073996
 0.962902 0.031956 0.002442 0.002701
 0.705853 0.002442 0.002442 0.289263
 0.992415 0.002442 0.002442 0.002701

MOTIF 2-AAGAATAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 7.6e-001
 0.932964 0.021582 0.021582 0.023873
 0.932964 0.021582 0.021582 0.023873
 0.023873 0.021582 0.930673 0.023873
 0.932964 0.021582 0.021582 0.023873
 0.932964 0.021582 0.021582 0.023873
 0.023873 0.021582 0.021582 0.932964
 0.932964 0.021582 0.021582 0.023873
 0.023873 0.930673 0.021582 0.023873

MOTIF 3-TGCTTCCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 10 P= 1.0e+000
 0.023873 0.021582 0.021582 0.932964
 0.023873 0.021582 0.930673 0.023873
 0.023873 0.930673 0.021582 0.023873
 0.023873 0.021582 0.021582 0.932964
 0.023873 0.021582 0.021582 0.932964
 0.023873 0.930673 0.021582 0.023873
 0.023873 0.930673 0.021582 0.023873
 0.932964 0.021582 0.021582 0.023873

MOTIF 4-GGAAAGAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.0e+000
 0.001351 0.001221 0.996076 0.001351
 0.001351 0.001221 0.960412 0.037016
 0.766299 0.180700 0.036886 0.016115
 0.852330 0.145098 0.001221 0.001351
 0.957266 0.036886 0.004496 0.001351
 0.001351 0.015985 0.981312 0.001351
 0.801946 0.015985 0.115830 0.066238
 0.175422 0.072781 0.745148 0.006649

MOTIF 5-GTCCTGAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.050217 0.001657 0.946293 0.001833
 0.001833 0.001657 0.098580 0.897929
 0.001833 0.948578 0.027727 0.021862
 0.147452 0.849057 0.001657 0.001833
 0.050217 0.001657 0.098580 0.849546
 0.098756 0.050041 0.849370 0.001833
 0.920399 0.050041 0.027727 0.001833
 0.800850 0.050041 0.147277 0.001833

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/PRDM10.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_PRDM10/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n09.farnam.hpc.yale.internal
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FINALTIME:	5.77 seconds
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