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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.198 C 0.302 G 0.302 T 0.198 

MOTIF 1-CCACGTGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 174 P= 2.3e-002
 0.000317 0.858800 0.092046 0.048837
 0.000317 0.998884 0.000483 0.000317
 0.717125 0.006452 0.048952 0.227471
 0.000317 0.843911 0.000483 0.155290
 0.011396 0.052745 0.935543 0.000317
 0.000317 0.103267 0.000483 0.895933
 0.022475 0.000483 0.972139 0.004903
 0.024491 0.719591 0.129660 0.126258

MOTIF 2-CTGGGACN STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 73 P= 2.6e-001
 0.000503 0.966064 0.032930 0.000503
 0.000503 0.156194 0.135743 0.707560
 0.000503 0.045467 0.922001 0.032029
 0.070943 0.000766 0.927788 0.000503
 0.042979 0.000766 0.955752 0.000503
 0.924044 0.000766 0.000766 0.074423
 0.000503 0.697653 0.223504 0.078340
 0.295665 0.232210 0.249278 0.222847

MOTIF 3-CAGACAAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 5.0e-001
 0.091948 0.859610 0.047151 0.001291
 0.873595 0.047151 0.001968 0.077286
 0.001291 0.001968 0.950267 0.046474
 0.994773 0.001968 0.001968 0.001291
 0.001291 0.859464 0.001968 0.137277
 0.834600 0.047151 0.071775 0.046474
 0.813384 0.047151 0.001968 0.137497
 0.014714 0.020672 0.963322 0.001291

MOTIF 4-TGACTCAK STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 5.0e-001
 0.002188 0.003335 0.003335 0.991142
 0.155566 0.003335 0.838911 0.002188
 0.991142 0.003335 0.003335 0.002188
 0.002188 0.992289 0.003335 0.002188
 0.002188 0.003335 0.003335 0.991142
 0.002188 0.992289 0.003335 0.002188
 0.914576 0.003335 0.079901 0.002188
 0.002188 0.003335 0.606979 0.387497

MOTIF 5-CCARCCAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 1.0e+000
 0.111731 0.884302 0.002395 0.001572
 0.001572 0.939470 0.002395 0.056563
 0.938647 0.002395 0.002395 0.056563
 0.552817 0.111843 0.278777 0.056563
 0.001572 0.939382 0.002395 0.056651
 0.001572 0.994462 0.002395 0.001572
 0.938647 0.057387 0.002395 0.001572
 0.001572 0.057387 0.939470 0.001572

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/L3MBTL2.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_L3MBTL2/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n08.farnam.hpc.yale.internal
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FINALTIME:	3.71 seconds
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