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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.245 C 0.255 G 0.255 T 0.245 

MOTIF 1-AGATAAGR STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 80 P= 9.6e-004
 0.755978 0.035748 0.000645 0.207629
 0.000619 0.000645 0.998117 0.000619
 0.943396 0.000645 0.055340 0.000619
 0.000619 0.000645 0.000645 0.998091
 0.998091 0.000645 0.000645 0.000619
 0.936024 0.000645 0.000645 0.062686
 0.000619 0.222885 0.740831 0.035665
 0.430706 0.144868 0.381689 0.042737

MOTIF 2-AGAGGGTG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.2e-001
 0.903110 0.014812 0.001210 0.080868
 0.166514 0.018914 0.813411 0.001160
 0.751857 0.014812 0.133279 0.100052
 0.060941 0.001210 0.903831 0.034018
 0.100052 0.014812 0.866271 0.018865
 0.001160 0.001210 0.996469 0.001160
 0.001160 0.034068 0.001210 0.963562
 0.014763 0.001210 0.976583 0.007445

MOTIF 3-MTGAGTCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 61 P= 1.7e-001
 0.402267 0.452589 0.144420 0.000724
 0.193643 0.123736 0.000754 0.681867
 0.000724 0.000754 0.731284 0.267238
 0.936310 0.062212 0.000754 0.000724
 0.000724 0.000754 0.997799 0.000724
 0.000724 0.000754 0.000754 0.997768
 0.132185 0.722538 0.000754 0.144522
 0.977282 0.000754 0.021240 0.000724

MOTIF 4-MATTCCCA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 124 P= 6.2e-001
 0.284585 0.503074 0.031145 0.181197
 0.653129 0.257299 0.012384 0.077188
 0.024310 0.000440 0.000440 0.974811
 0.000422 0.000440 0.070125 0.929013
 0.048236 0.925099 0.000440 0.026225
 0.000422 0.938978 0.036272 0.024329
 0.029973 0.739805 0.036291 0.193931
 0.866773 0.000440 0.006412 0.126376

MOTIF 5-GAGAGGGA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 1.0e+000
 0.022255 0.023200 0.932291 0.022255
 0.931345 0.023200 0.023200 0.022255
 0.022255 0.023200 0.932291 0.022255
 0.931345 0.023200 0.023200 0.022255
 0.022255 0.023200 0.932291 0.022255
 0.022255 0.023200 0.932291 0.022255
 0.022255 0.023200 0.932291 0.022255
 0.931345 0.023200 0.023200 0.022255

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/IKZF1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_IKZF1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n04.farnam.hpc.yale.internal
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FINALTIME:	1.69 seconds
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