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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.22 C 0.28 G 0.28 T 0.22 

MOTIF 1-ATGACTCA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 231 P= 6.2e-011
 0.721389 0.032795 0.241991 0.003825
 0.000174 0.000221 0.002047 0.997558
 0.000174 0.000342 0.999311 0.000174
 0.993906 0.005699 0.000221 0.000174
 0.005309 0.701833 0.276199 0.016659
 0.005660 0.000221 0.005699 0.988420
 0.011199 0.982928 0.000221 0.005651
 0.997756 0.001848 0.000221 0.000174

MOTIF 2-CTGTAATC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.2e-001
 0.022584 0.973761 0.002047 0.001608
 0.052279 0.002047 0.052717 0.892957
 0.052279 0.087272 0.808171 0.052279
 0.001608 0.103551 0.002047 0.892794
 0.994298 0.002047 0.002047 0.001608
 0.841796 0.002047 0.154548 0.001608
 0.022584 0.002047 0.002047 0.973322
 0.001608 0.944066 0.002047 0.052279

MOTIF 3-CCTCCCAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 63 P= 5.0e-001
 0.000869 0.991922 0.006341 0.000869
 0.000869 0.958455 0.012436 0.028240
 0.083247 0.043394 0.055936 0.817423
 0.000869 0.909543 0.006341 0.083247
 0.000869 0.994643 0.001106 0.003382
 0.028240 0.931084 0.012436 0.028240
 0.887347 0.055936 0.028477 0.028240
 0.627112 0.110913 0.123363 0.138611

MOTIF 4-CCCCACAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 5.0e-001
 0.001789 0.994147 0.002276 0.001789
 0.001789 0.963784 0.032639 0.001789
 0.001789 0.937796 0.058627 0.001789
 0.228282 0.654771 0.002276 0.114671
 0.937218 0.002276 0.058717 0.001789
 0.114671 0.881265 0.002276 0.001789
 0.880777 0.002276 0.115158 0.001789
 0.001789 0.994147 0.002276 0.001789

MOTIF 5-ACAGACAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 7.0e-001
 0.878715 0.002316 0.117150 0.001819
 0.001819 0.854985 0.141376 0.001819
 0.993549 0.002316 0.002316 0.001819
 0.001819 0.163555 0.832806 0.001819
 0.993549 0.002316 0.002316 0.001819
 0.174349 0.821516 0.002316 0.001819
 0.936224 0.002316 0.059641 0.001819
 0.001819 0.994045 0.002316 0.001819

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/FOSL1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_FOSL1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n05.farnam.hpc.yale.internal
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FINALTIME:	1.45 seconds
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