********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.245 C 0.255 G 0.255 T 0.245 

MOTIF 1-ACMGGAAG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 228 P= 1.5e-006
 0.667545 0.000277 0.238790 0.093388
 0.025544 0.878826 0.065214 0.030416
 0.438046 0.561411 0.000277 0.000266
 0.000266 0.007796 0.991673 0.000266
 0.000266 0.000277 0.999192 0.000266
 0.999181 0.000277 0.000277 0.000266
 0.851064 0.000277 0.000277 0.148383
 0.164988 0.045563 0.789183 0.000266

MOTIF 2-CCTCCCCC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 9.5e-002
 0.023492 0.891592 0.001506 0.083410
 0.021904 0.953099 0.001506 0.023492
 0.207352 0.001506 0.083470 0.707672
 0.021904 0.929265 0.047385 0.001446
 0.071945 0.925103 0.001506 0.001446
 0.001446 0.954621 0.042488 0.001446
 0.001446 0.995603 0.001506 0.001446
 0.115270 0.818563 0.064721 0.001446

MOTIF 3-AGTTGCCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.2e-001
 0.749202 0.036545 0.001297 0.212956
 0.184450 0.001297 0.742399 0.071853
 0.001245 0.001297 0.001297 0.996160
 0.177482 0.001297 0.001297 0.819924
 0.001245 0.036545 0.960965 0.001245
 0.036493 0.890470 0.036545 0.036493
 0.001245 0.784615 0.071792 0.142348
 0.883336 0.001297 0.001297 0.114070

MOTIF 4-CTTATCTC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 74 P= 5.0e-001
 0.131324 0.764733 0.035933 0.068010
 0.035850 0.131864 0.018262 0.814024
 0.018236 0.004017 0.037565 0.940181
 0.920220 0.053604 0.007940 0.018236
 0.044657 0.018262 0.035876 0.901205
 0.007914 0.955559 0.018262 0.018265
 0.000622 0.000648 0.106445 0.892284
 0.127295 0.682520 0.110085 0.080100

MOTIF 5-CAAACCAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 9.5e-001
 0.121372 0.558959 0.141898 0.177771
 0.840923 0.001291 0.001291 0.156496
 0.996180 0.001291 0.001291 0.001239
 0.961113 0.001291 0.001291 0.036306
 0.001239 0.996231 0.001291 0.001239
 0.001239 0.981715 0.001291 0.015756
 0.715136 0.001291 0.212088 0.071486
 0.001239 0.996231 0.001291 0.001239

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/ETV1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_ETV1/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c22n08.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	2.52 seconds
********************************************************************************