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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.209 C 0.291 G 0.291 T 0.209 

MOTIF 1-ACGTGGCA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 126 P= 2.5e-002
 0.962630 0.019122 0.014097 0.004152
 0.002800 0.973845 0.000393 0.022961
 0.002070 0.004263 0.984036 0.009631
 0.000282 0.000393 0.004263 0.995062
 0.009631 0.000393 0.970936 0.019041
 0.000282 0.000393 0.982034 0.017291
 0.007294 0.973318 0.009757 0.009631
 0.714352 0.028438 0.104038 0.153171

MOTIF 2-GTTCCAGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 54 P= 2.1e-001
 0.001274 0.001778 0.995675 0.001274
 0.082828 0.001778 0.001778 0.913617
 0.001274 0.001778 0.001778 0.995171
 0.043571 0.932229 0.022927 0.001274
 0.128576 0.595518 0.001778 0.274128
 0.995171 0.001778 0.001778 0.001274
 0.128576 0.044075 0.826075 0.001274
 0.995171 0.001778 0.001778 0.001274

MOTIF 3-CCCGMGAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 3.3e-001
 0.071663 0.923319 0.002924 0.002095
 0.002095 0.853750 0.072492 0.071663
 0.002095 0.992887 0.002924 0.002095
 0.002095 0.002924 0.992887 0.002095
 0.641963 0.353018 0.002924 0.002095
 0.071663 0.002924 0.923319 0.002095
 0.852698 0.142284 0.002924 0.002095
 0.002095 0.142284 0.783958 0.071663

MOTIF 4-GAGSAAGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 9.9e-001
 0.101178 0.001360 0.896487 0.000975
 0.933899 0.001360 0.063766 0.000975
 0.000975 0.001360 0.996691 0.000975
 0.000975 0.340208 0.657843 0.000975
 0.670960 0.001360 0.001360 0.326320
 0.996305 0.001360 0.001360 0.000975
 0.169821 0.001360 0.827844 0.000975
 0.709423 0.255875 0.001360 0.033341

MOTIF 5-GAAGGGAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.002270 0.003169 0.992290 0.002270
 0.991392 0.003169 0.003169 0.002270
 0.991392 0.003169 0.003169 0.002270
 0.002270 0.003169 0.992290 0.002270
 0.002270 0.153977 0.841483 0.002270
 0.002270 0.003169 0.841483 0.153078
 0.915988 0.003169 0.003169 0.077674
 0.991392 0.003169 0.003169 0.002270

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/CREB3L1.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_CREB3L1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n09.farnam.hpc.yale.internal
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FINALTIME:	1.71 seconds
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