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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.249 C 0.251 G 0.251 T 0.249 

MOTIF 1-CATCACAG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 56 P= 4.8e-003
 0.022682 0.931864 0.022773 0.022682
 0.931773 0.022773 0.022773 0.022682
 0.022682 0.022773 0.022773 0.931773
 0.022682 0.931864 0.022773 0.022682
 0.931773 0.022773 0.022773 0.022682
 0.022682 0.931864 0.022773 0.022682
 0.931773 0.022773 0.022773 0.022682
 0.022682 0.022773 0.931864 0.022682

MOTIF 2-TAGGAGGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 60 P= 4.8e-003
 0.022682 0.022773 0.022773 0.931773
 0.931773 0.022773 0.022773 0.022682
 0.022682 0.022773 0.931864 0.022682
 0.022682 0.022773 0.931864 0.022682
 0.931773 0.022773 0.022773 0.022682
 0.022682 0.022773 0.931864 0.022682
 0.022682 0.022773 0.931864 0.022682
 0.931773 0.022773 0.022773 0.022682

MOTIF 3-AAATGGTT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 78 P= 1.2e-002
 0.757667 0.000635 0.223499 0.018200
 0.998098 0.000635 0.000635 0.000632
 0.927772 0.018202 0.035826 0.018200
 0.000632 0.018202 0.000635 0.980530
 0.089038 0.000635 0.874503 0.035824
 0.000632 0.000635 0.998100 0.000632
 0.000632 0.000635 0.000635 0.998098
 0.007905 0.000635 0.000635 0.990826

MOTIF 4-CTCYRGGC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 72 P= 2.3e-001
 0.000573 0.998278 0.000575 0.000573
 0.000573 0.000575 0.000575 0.998276
 0.032415 0.966436 0.000575 0.000573
 0.032415 0.532311 0.016497 0.418777
 0.602342 0.007166 0.389919 0.000573
 0.057683 0.035463 0.906281 0.000573
 0.000573 0.000575 0.876061 0.122790
 0.000573 0.998278 0.000575 0.000573

MOTIF 5-CAGCAAGT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 2.4e-001
 0.007667 0.939989 0.017654 0.034690
 0.895924 0.051731 0.051731 0.000613
 0.017679 0.144589 0.786003 0.051729
 0.190297 0.757358 0.034693 0.017652
 0.912880 0.017654 0.034748 0.034718
 0.665467 0.085973 0.244687 0.003872
 0.000613 0.051786 0.929949 0.017652
 0.017652 0.017654 0.000616 0.964078

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/CEBPZ.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_CEBPZ/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n10.farnam.hpc.yale.internal
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FINALTIME:	3.78 seconds
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