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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.255 C 0.245 G 0.245 T 0.255 

MOTIF 1-ACTGAGGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 91 P= 2.0e-003
 0.998641 0.000446 0.000446 0.000466
 0.000466 0.998622 0.000446 0.000466
 0.000466 0.025779 0.051358 0.922397
 0.051295 0.000446 0.947793 0.000466
 0.985995 0.013092 0.000446 0.000466
 0.000466 0.000446 0.998622 0.000466
 0.089851 0.000446 0.909236 0.000466
 0.000466 0.998622 0.000446 0.000466

MOTIF 2-CACACAGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 55 P= 2.0e-003
 0.023209 0.931336 0.022245 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.931336 0.022245 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.931336 0.022245 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.022245 0.931336 0.023209
 0.023209 0.931336 0.022245 0.023209

MOTIF 3-AAATGGGG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 108 P= 4.8e-003
 0.971448 0.000478 0.014026 0.014047
 0.957879 0.014048 0.014026 0.014047
 0.969365 0.000478 0.029658 0.000499
 0.000499 0.006087 0.000478 0.992936
 0.014069 0.000478 0.971406 0.014047
 0.000499 0.000478 0.927777 0.071246
 0.100258 0.000478 0.898765 0.000499
 0.179094 0.141057 0.618215 0.061634

MOTIF 4-TACAGATG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 110 P= 4.9e-002
 0.000418 0.085980 0.000401 0.913201
 0.880604 0.038580 0.046216 0.034599
 0.000418 0.838490 0.115080 0.046011
 0.998780 0.000401 0.000401 0.000418
 0.000418 0.000401 0.998762 0.000418
 0.926083 0.000401 0.061722 0.011793
 0.069113 0.027889 0.036896 0.866101
 0.080302 0.034582 0.884698 0.000418

MOTIF 5-CAGAGAGG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 65 P= 1.2e-001
 0.023209 0.931336 0.022245 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.022245 0.931336 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.022245 0.931336 0.023209
 0.932300 0.022245 0.022245 0.023209
 0.023209 0.022245 0.931336 0.023209
 0.023209 0.022245 0.931336 0.023209

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/K562/fasta/RankLinear5.0_60/BCOR.fasta --oc ../result/final_prediction/K562/inference_raw/STREME/RankLinear5.0_60_BCOR/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n01.farnam.hpc.yale.internal
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FINALTIME:	1.37 seconds
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