******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZSCAN29.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr16:22218367-22218447 1.0000 80 chr7:30325582-30325662 1.0000 80 chr3:182698671-182698751 1.0000 80 chr9:108458833-108458913 1.0000 80 chr1:94146371-94146451 1.0000 80 chr2:239067949-239068029 1.0000 80 chr18:18690762-18690842 1.0000 80 chr12:54476010-54476090 1.0000 80 chr22:50355416-50355496 1.0000 80 chr10:88295520-88295600 1.0000 80 chr2:70781368-70781448 1.0000 80 chr12:42983028-42983108 1.0000 80 chr3:13035124-13035204 1.0000 80 chr14:102991624-10299170 1.0000 80 chr19:55969583-55969663 1.0000 80 chr17:60556217-60556297 1.0000 80 chr17:77965996-77966076 1.0000 80 chr16:86531871-86531951 1.0000 80 chr1:26235615-26235695 1.0000 80 chr16:9053888-9053968 1.0000 80 chr18:77344587-77344667 1.0000 80 chr12:54429760-54429840 1.0000 80 chr1:26960369-26960449 1.0000 80 chr10:134605635-13460571 1.0000 80 chr3:184231592-184231672 1.0000 80 chr20:52534469-52534549 1.0000 80 chr7:116910011-116910091 1.0000 80 chr12:56334145-56334225 1.0000 80 chr12:95868443-95868523 1.0000 80 chr5:140792523-140792603 1.0000 80 chr4:109684566-109684646 1.0000 80 chr9:140512337-140512417 1.0000 80 chr20:49186192-49186272 1.0000 80 chr3:197806801-197806881 1.0000 80 chr7:10979017-10979097 1.0000 80 chr1:221914351-221914431 1.0000 80 chr22:43485138-43485218 1.0000 80 chr16:31146969-31147049 1.0000 80 chr12:133136744-13313682 1.0000 80 chr17:38948176-38948256 1.0000 80 chr22:26969344-26969424 1.0000 80 chr19:8274694-8274774 1.0000 80 chr19:17798676-17798756 1.0000 80 chr8:144422089-144422169 1.0000 80 chr19:17797467-17797547 1.0000 80 chr18:53449097-53449177 1.0000 80 chr22:20254691-20254771 1.0000 80 chr7:26192688-26192768 1.0000 80 chr16:87952564-87952644 1.0000 80 chr11:77851191-77851271 1.0000 80 chr21:37694094-37694174 1.0000 80 chr16:46723984-46724064 1.0000 80 chr12:54332954-54333034 1.0000 80 chr16:75018371-75018451 1.0000 80 chr3:187456271-187456351 1.0000 80 chr22:42764679-42764759 1.0000 80 chr3:156392854-156392934 1.0000 80 chr10:120966305-12096638 1.0000 80 chr3:81598645-81598725 1.0000 80 chr16:84537827-84537907 1.0000 80 chr1:26126422-26126502 1.0000 80 chr6:4812396-4812476 1.0000 80 chr3:128210859-128210939 1.0000 80 chr4:77872348-77872428 1.0000 80 chr17:6347066-6347146 1.0000 80 chr12:132379247-13237932 1.0000 80 chr11:10878408-10878488 1.0000 80 chr8:38269272-38269352 1.0000 80 chr17:1389358-1389438 1.0000 80 chr14:99814722-99814802 1.0000 80 chr18:45534927-45535007 1.0000 80 chr2:120399367-120399447 1.0000 80 chr1:90099679-90099759 1.0000 80 chr1:178695390-178695470 1.0000 80 chr1:1127981-1128061 1.0000 80 chr20:29524944-29525024 1.0000 80 chr17:46801204-46801284 1.0000 80 chr9:6758761-6758841 1.0000 80 chr19:55896648-55896728 1.0000 80 chr1:46957561-46957641 1.0000 80 chr21:36042199-36042279 1.0000 80 chr11:113586120-11358620 1.0000 80 chr1:146799275-146799355 1.0000 80 chr12:132974110-13297419 1.0000 80 chr4:174448243-174448323 1.0000 80 chr13:20438972-20439052 1.0000 80 chr1:9420883-9420963 1.0000 80 chr5:95068970-95069050 1.0000 80 chr2:14774427-14774507 1.0000 80 chr1:52498646-52498726 1.0000 80 chr14:34418830-34418910 1.0000 80 chr10:22608650-22608730 1.0000 80 chr6:20302942-20303022 1.0000 80 chrX:154042244-154042324 1.0000 80 chr19:52800748-52800828 1.0000 80 chr2:237076443-237076523 1.0000 80 chr9:124855275-124855355 1.0000 80 chr12:93771275-93771355 1.0000 80 chr4:144921614-144921694 1.0000 80 chr2:198342689-198342769 1.0000 80 chr1:47695352-47695432 1.0000 80 chr6:34204943-34205023 1.0000 80 chr1:24620871-24620951 1.0000 80 chr3:88109118-88109198 1.0000 80 chr12:53343009-53343089 1.0000 80 chr2:176953103-176953183 1.0000 80 chr11:82905448-82905528 1.0000 80 chr9:44867067-44867147 1.0000 80 chr1:32398122-32398202 1.0000 80 chr1:168131178-168131258 1.0000 80 chr19:1752124-1752204 1.0000 80 chr7:148615470-148615550 1.0000 80 chr5:32173542-32173622 1.0000 80 chr20:278808-278888 1.0000 80 chr15:51915592-51915672 1.0000 80 chr19:6600728-6600808 1.0000 80 chr2:84685770-84685850 1.0000 80 chr5:135525184-135525264 1.0000 80 chr11:63938017-63938097 1.0000 80 chr10:94353729-94353809 1.0000 80 chr11:62693476-62693556 1.0000 80 chr3:150127624-150127704 1.0000 80 chr10:60026251-60026331 1.0000 80 chr1:39035937-39036017 1.0000 80 chr21:44528353-44528433 1.0000 80 chr6:126069869-126069949 1.0000 80 chr19:42379670-42379750 1.0000 80 chr17:46688002-46688082 1.0000 80 chr9:33560392-33560472 1.0000 80 chr11:72975595-72975675 1.0000 80 chr2:145273584-145273664 1.0000 80 chr12:132435107-13243518 1.0000 80 chr14:68008568-68008648 1.0000 80 chr6:37139196-37139276 1.0000 80 chr9:127531975-127532055 1.0000 80 chr11:86383349-86383429 1.0000 80 chr17:26120379-26120459 1.0000 80 chr12:113542005-11354208 1.0000 80 chr2:27308623-27308703 1.0000 80 chr12:122984736-12298481 1.0000 80 chr10:43039378-43039458 1.0000 80 chr19:39897926-39898006 1.0000 80 chr4:3941907-3941987 1.0000 80 chr6:27142877-27142957 1.0000 80 chr1:162350401-162350481 1.0000 80 chr19:59030487-59030567 1.0000 80 chr7:33102273-33102353 1.0000 80 chr1:934549-934629 1.0000 80 chr11:47358946-47359026 1.0000 80 chr11:118956070-11895615 1.0000 80 chr1:27775646-27775726 1.0000 80 chr6:134495274-134495354 1.0000 80 chr1:31635737-31635817 1.0000 80 chr10:134605963-13460604 1.0000 80 chr5:201050-201130 1.0000 80 chr15:90809459-90809539 1.0000 80 chr22:50354396-50354476 1.0000 80 chr7:129419688-129419768 1.0000 80 chr7:155411442-155411522 1.0000 80 chr7:80791206-80791286 1.0000 80 chr10:7425533-7425613 1.0000 80 chr19:18707742-18707822 1.0000 80 chr17:79875462-79875542 1.0000 80 chr2:225266789-225266869 1.0000 80 chr8:67045137-67045217 1.0000 80 chrX:135827173-135827253 1.0000 80 chr1:246363553-246363633 1.0000 80 chr6:160113880-160113960 1.0000 80 chr14:65769019-65769099 1.0000 80 chr1:45965493-45965573 1.0000 80 chr17:46891970-46892050 1.0000 80 chr19:11847997-11848077 1.0000 80 chr14:60952041-60952121 1.0000 80 chrX:68048846-68048926 1.0000 80 chr2:220093658-220093738 1.0000 80 chr11:61153123-61153203 1.0000 80 chr19:15442929-15443009 1.0000 80 chr6:17281493-17281573 1.0000 80 chr22:18958975-18959055 1.0000 80 chr2:9796588-9796668 1.0000 80 chr15:102029598-10202967 1.0000 80 chr5:612713-612793 1.0000 80 chr17:37879803-37879883 1.0000 80 chr12:76552708-76552788 1.0000 80 chr7:120497074-120497154 1.0000 80 chr2:173504605-173504685 1.0000 80 chr3:193561465-193561545 1.0000 80 chr14:99814927-99815007 1.0000 80 chr19:40932191-40932271 1.0000 80 chr2:12858504-12858584 1.0000 80 chr9:115430697-115430777 1.0000 80 chr19:18264426-18264506 1.0000 80 chr14:71787798-71787878 1.0000 80 chr4:48782162-48782242 1.0000 80 chr15:56586147-56586227 1.0000 80 chr3:131050386-131050466 1.0000 80 chr6:108910574-108910654 1.0000 80 chr22:39746410-39746490 1.0000 80 chr17:72868595-72868675 1.0000 80 chr1:31287352-31287432 1.0000 80 chr11:3012981-3013061 1.0000 80 chrX:7065788-7065868 1.0000 80 chr7:100487517-100487597 1.0000 80 chr4:25239827-25239907 1.0000 80 chr11:66045449-66045529 1.0000 80 chr20:56285305-56285385 1.0000 80 chr4:79617250-79617330 1.0000 80 chr19:49661666-49661746 1.0000 80 chr7:128171462-128171542 1.0000 80 chr17:44899225-44899305 1.0000 80 chr4:124476694-124476774 1.0000 80 chr1:162414513-162414593 1.0000 80 chr4:10458943-10459023 1.0000 80 chr18:55102136-55102216 1.0000 80 chr7:92077502-92077582 1.0000 80 chr1:17767195-17767275 1.0000 80 chr10:112432065-11243214 1.0000 80 chr9:44118326-44118406 1.0000 80 chr11:63688706-63688786 1.0000 80 chr22:19749243-19749323 1.0000 80 chr8:22224819-22224899 1.0000 80 chr8:125748377-125748457 1.0000 80 chr19:29584033-29584113 1.0000 80 chr17:46697312-46697392 1.0000 80 chr17:48945167-48945247 1.0000 80 chr5:95997635-95997715 1.0000 80 chr3:155588060-155588140 1.0000 80 chr15:93425193-93425273 1.0000 80 chr3:15373845-15373925 1.0000 80 chr16:80801643-80801723 1.0000 80 chr19:49956240-49956320 1.0000 80 chr6:26569486-26569566 1.0000 80 chrX:40945945-40946025 1.0000 80 chr6:27722054-27722134 1.0000 80 chr10:30791300-30791380 1.0000 80 chr7:128580195-128580275 1.0000 80 chr6:18263201-18263281 1.0000 80 chr4:71859697-71859777 1.0000 80 chr11:14666605-14666685 1.0000 80 chr15:51913059-51913139 1.0000 80 chr10:44144589-44144669 1.0000 80 chr10:25240644-25240724 1.0000 80 chr20:49128732-49128812 1.0000 80 chr1:246363755-246363835 1.0000 80 chr6:16238917-16238997 1.0000 80 chr19:2360511-2360591 1.0000 80 chr8:144276809-144276889 1.0000 80 chr1:24126298-24126378 1.0000 80 chr6:161650348-161650428 1.0000 80 chr1:120402429-120402509 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZSCAN29/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZSCAN29.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.217 C 0.283 G 0.286 T 0.213 Background letter frequencies (from file dataset with add-one prior applied): A 0.218 C 0.283 G 0.286 T 0.213 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GTSTASAC MEME-1 width = 8 sites = 134 llr = 1072 E-value = 3.8e-120 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::1:a:8: pos.-specific C :26::4:a probability G a:3::42: matrix T :8:a:1:: bits 2.2 ** 2.0 ** 1.8 * ** 1.6 * ** * Relative 1.3 ** ** ** Entropy 1.1 ** ** ** (11.5 bits) 0.9 ** ** ** 0.7 ** ** ** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTCTACAC consensus CG GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:46697312-46697392 33 2.81e-05 CAGGAGCCTG GTCTACAC CAGCTGTAAA chr7:92077502-92077582 36 2.81e-05 ATATACACAT GTCTACAC AGTCGTATAC chr4:10458943-10459023 39 2.81e-05 GCGAAGGGGC GTCTACAC CGCCGGCCGC chr1:162414513-162414593 15 2.81e-05 GGGGTAGGAA GTCTACAC AGGCACAGCC chr1:31287352-31287432 40 2.81e-05 tagttgtcat gtctacac tgtcaataac chr14:71787798-71787878 14 2.81e-05 CGCGCCGGCC GTCTACAC GGTTTCTCTT chr19:40932191-40932271 23 2.81e-05 CCCGACAGGG GTCTACAC TACAGATAAT chr12:76552708-76552788 32 2.81e-05 CACAGCCGCA GTCTACAC TGCTGAATTC chr2:9796588-9796668 34 2.81e-05 CCAGGGCTGA GTCTACAC AGTCAACAGC chr22:18958975-18959055 35 2.81e-05 ACGTGCACAT GTCTACAC GGACTGCACA chr14:65769019-65769099 45 2.81e-05 tcgggtTTAT GTCTACAC TGAGATATGC chr5:201050-201130 51 2.81e-05 CACAGCCAGC GTCTACAC AGCAGGCTGC chr10:134605963-13460604 39 2.81e-05 GGGGTGCAGC GTCTACAC TGGGTCCGGG chr11:118956070-11895615 39 2.81e-05 AAGAACGTTC GTCTACAC AGACGGGGTC chr4:3941907-3941987 36 2.81e-05 CTGGGTGTCT GTCTAGAC ACGTCCTCCA chr6:37139196-37139276 53 2.81e-05 CAAGGACACC GTCTACAC GGACTTCGAT chr11:72975595-72975675 7 2.81e-05 GCCGCC GTCTACAC GGTCCCCTCA chr1:39035937-39036017 38 2.81e-05 GGGCGCAGGC GTCTACAC GGACACATCC chr5:32173542-32173622 50 2.81e-05 GCACCCTGGG GTCTACAC GGGTTAAAAA chr1:168131178-168131258 8 2.81e-05 CAGCTGC GTCTACAC TGCCCTATTC chr1:24620871-24620951 41 2.81e-05 TGAAATCACC GTCTACAC AGACACAAAC chr6:20302942-20303022 16 2.81e-05 GAATGTTAGT GTCTACAC TGTCCGTCAC chr13:20438972-20439052 21 2.81e-05 TTTGTTCCTC GTCTACAC CTACGTCTTC chr12:132974110-13297419 23 2.81e-05 GTCTCTGATT GTCTACAC AGCCGCCCTC chr18:45534927-45535007 42 2.81e-05 GCCCGCCCGC GTCTACAC CGCACACCCG chr14:99814722-99814802 59 2.81e-05 GTGAGTGACC GTCTACAC GGTCAGGGAG chr16:84537827-84537907 41 2.81e-05 CCCTTTCCGC GTCTACAC AGGCTCTGAA chr3:81598645-81598725 24 2.81e-05 ctcatacctt gtctacac agtctctgta chr22:42764679-42764759 26 2.81e-05 GCAAGCGCAA GTCTACAC GGTCTCACCT chr18:53449097-53449177 22 2.81e-05 AAGGAAACAC GTCTACAC AGGCATCAGG chr8:144422089-144422169 63 2.81e-05 CCCAGCACTG GTCTACAC AGCATTCCCC chr1:221914351-221914431 1 2.81e-05 . GTCTACAC ACGACCGTCA chr10:134605635-13460571 44 2.81e-05 GGGGTGCAGC GTCTACAC TGGGTCCCGG chr18:77344587-77344667 49 2.81e-05 TGAAGGCCTC GTCTACAC AGCACTCCCT chr16:9053888-9053968 15 2.81e-05 ATTCAATAGC GTCTACAC CGACCATCTG chr19:55969583-55969663 34 2.81e-05 CTGTCAGAGC GTCTACAC CGCAGGGGCC chr12:42983028-42983108 52 2.81e-05 TGCTTTCCCT GTCTACAC AGCCCAACAA chr22:50355416-50355496 25 2.81e-05 CAAGGACACG GTCTACAC CGACTTCGAC chr1:94146371-94146451 24 2.81e-05 CTCGACGAGT GTCTACAC CTGATTACAC chr1:24126298-24126378 22 5.65e-05 TGGGTGGGCC GTGTAGAC GTGGACTTGG chr19:2360511-2360591 53 5.65e-05 CCACTGGGGT GTGTAGAC ATGGCCAGGT chr1:246363755-246363835 55 5.65e-05 ATAGAGAATA GTGTAGAC GCTGAGAAAG chr17:48945167-48945247 29 5.65e-05 GGGCGGGCCC GTGTAGAC CAGCTGTGCT chr9:44118326-44118406 51 5.65e-05 TCCGGAACCC GTGTAGAC GTGGTCTATG chr17:44899225-44899305 15 5.65e-05 CGGAGGCACC GTGTAGAC AAAGAATCCG chr19:49661666-49661746 12 5.65e-05 GTTTGGGTCT GTGTAGAC ACCCCTCATT chr15:102029598-10202967 66 5.65e-05 CCAGTGGTTG GTGTAGAC GGGGCgc chr19:11847997-11848077 38 5.65e-05 GGGTATCTCT GTGTAGAC AAGATAAAGG chr1:246363553-246363633 14 5.65e-05 GTAGAGAACA GTGTAGAC GCTGAGCGAG chr17:79875462-79875542 48 5.65e-05 TCCCGCGCCT GTGTAGAC GACCAAGTAT chr1:31635737-31635817 43 5.65e-05 GATTAAGATT GTGTAGAC AGGGAAGAGA chr1:162350401-162350481 22 5.65e-05 GGGGTAGTTG GTGTAGAC AGAAACCTTG chr9:33560392-33560472 64 5.65e-05 gttttatctg gtgtagac acttgtggg chr19:6600728-6600808 65 5.65e-05 gttgcaaacc gtgtagac atagccgg chr2:237076443-237076523 47 5.65e-05 GGGGTAGCCG GTGTAGAC GAAATGGCCG chr1:9420883-9420963 50 5.65e-05 GAGGCAGCCA GTGTAGAC CATCTCCATG chr9:6758761-6758841 26 5.65e-05 CCATGATGCG GTGTAGAC GGCGGGTGCT chr1:1127981-1128061 54 5.65e-05 GTTGGTATGA GTGTAGAC ACTCCAGTTC chr17:6347066-6347146 34 5.65e-05 CGGGGAGCCG GTGTAGAC GGGTGGAGGG chr16:46723984-46724064 61 5.65e-05 GGCGAGGACT GTGTAGAC CTTAACCGGG chr22:20254691-20254771 58 5.65e-05 TGTGCAGTCC GTGTAGAC AAGTGCACGT chr20:49186192-49186272 49 5.65e-05 AGACTGTCCT GTGTAGAC TGTCTCTGTA chr1:26235615-26235695 35 5.65e-05 TATTTGATCT GTGTAGAC AGCTAAAGGA chr10:88295520-88295600 63 5.65e-05 CGGTTCGTCC GTGTACAC CGGCCTCTCT chr2:239067949-239068029 54 5.65e-05 ACTCAGGGCC GTGTAGAC GCCGCCCTCA chr18:55102136-55102216 31 6.70e-05 ACGAGTGTTT GTCTATAC TGGCACATAG chr4:25239827-25239907 37 6.70e-05 CAATCATGTG GTCTATAC AGTTAAAATA chr1:27775646-27775726 30 6.70e-05 cgttgtccat gtctatac catcacacgg chr12:54332954-54333034 10 6.70e-05 CAGGGCGCC GTCTATAC GGACATCCCG chr14:102991624-10299170 47 6.70e-05 tgagcaaaca gtctatac ggacagtgga chr7:116910011-116910091 49 8.87e-05 TCATTTGTCT GTATAGAC AGTCTGCTGA chr16:22218367-22218447 66 8.87e-05 CTCCAGGACT GTATAGAC GCGCCCT chr20:52534469-52534549 3 1.37e-04 AG GCCTACAC TCACTCAGAA chr8:22224819-22224899 4 1.73e-04 CGT GTCTACGC GGACGCACCG chr11:66045449-66045529 58 1.73e-04 GGGCGGCCGC GTCTACGC TGTCCGGAGG chr6:160113880-160113960 61 1.73e-04 CCGCGGGACC GTCTACGC AGGCTGGGCT chr7:155411442-155411522 17 1.73e-04 GCCCTTGGCC GTCTACGC GGCTATCTTC chr22:50354396-50354476 49 1.73e-04 CCTGCTGCGC GTCTACGC GGTCCCCGCG chr12:113542005-11354208 48 1.73e-04 AGGCGCCCTC GTCTACGC GCTCCACGGC chr11:86383349-86383429 39 1.73e-04 GGGAGCTGAG GTCTACGC GGTCCCGCTG chr2:145273584-145273664 55 1.73e-04 CCTCGGGAGC GTCTACGC GGCCCCGCGC chr2:176953103-176953183 34 1.73e-04 CCTGGGCTCG GTCTACGC AGACCCATCG chr1:47695352-47695432 25 1.73e-04 GCAGGGAGGT GTCTACGC GGTTGCCTCC chr2:14774427-14774507 4 1.73e-04 AGC GTCTACGC GGTCACCGCG chr7:26192688-26192768 35 1.73e-04 GAAGTGCGGC GTCTACGC CGCCGGGAGC chr3:184231592-184231672 25 1.73e-04 CGCAGAACCA GTCTACGC GGACGCCGGA chr1:26960369-26960449 20 1.73e-04 ctcatacctt gtctacgc aggccctgtg chr2:173504605-173504685 67 2.11e-04 GTTTTAGTCT GCGTAGAC AGGGCA chr11:47358946-47359026 55 2.11e-04 GGCGTTGACC GCGTAGAC GCGCATCTCG chr1:934549-934629 35 2.11e-04 CGGGCGGCCC GCGTAGAC CTCGGGCGCT chr2:27308623-27308703 34 2.11e-04 GGCGTGGCCC GCGTAGAC TCCGGTGGCT chr14:68008568-68008648 48 2.11e-04 GCGCCGGCCA GCGTAGAC TGGCAGAAAC chr12:132435107-13243518 45 2.11e-04 CTCCTTCTCG GCGTAGAC CTGCCCGGTC chr17:46688002-46688082 55 2.11e-04 ATAGCCGGCC GCGTAGAC GCCGGCCGCG chr1:52498646-52498726 7 2.11e-04 GGGACT GCGTAGAC TGATGGGGTG chr21:36042199-36042279 54 2.11e-04 GTGGGGGACA GCGTAGAC GCGGAAGGTC chr17:46801204-46801284 31 2.11e-04 CCTGGAGCCC GCGTAGAC GCGACCCTGT chr3:128210859-128210939 39 2.11e-04 CGGGGTGCCT GCGTAGAC CTGGAGCTCA chr10:120966305-12096638 53 2.11e-04 GGCGCCGTCC GCGTAGAc cccgcgccgc chr16:75018371-75018451 27 2.11e-04 CCACTTAACC GCGTAGAC GCTGCAACAG chr19:8274694-8274774 69 2.11e-04 CAGCCCGGCC GCGTAGAC GGCT chr22:43485138-43485218 38 2.11e-04 TTTCGCAGCC GCGTAGAC ACTGGCGCCC chr17:77965996-77966076 57 2.11e-04 TTCTTGGCCT GCGTAGAC CCGTCCCTTT chr3:193561465-193561545 64 2.84e-04 CATGAAAGAA GTCTATGC AGTTGGGGC chrX:68048846-68048926 14 2.84e-04 AGCGGAGGGA GTCTATGC GAGCTGGACA chr10:43039378-43039458 2 2.84e-04 t gtctatgc gggctctctg chr5:135525184-135525264 40 2.84e-04 TAGATTCCAG GTCTATGC AGGCTCAATT chr7:148615470-148615550 11 2.84e-04 GATTTTCCTA GTCTATGC AGACAGATAC chr9:44867067-44867147 49 2.84e-04 CTTCATCTCT GTCTATGC AGGCCCAATT chr12:53343009-53343089 51 2.84e-04 CGCGGCCAGC GTCTATGC AGGCGCTGGG chr2:198342689-198342769 6 2.84e-04 ggcag gtctatgc aaacctagcc chr19:52800748-52800828 47 2.84e-04 GCGGATTCCG GTCTATGC GGTCCCCCAA chr5:95068970-95069050 27 2.84e-04 ACTGGTCAGA GTCTATGC AGGCAAATGA chr3:156392854-156392934 45 2.84e-04 GTGGGGGCGC GTCTATGC GGCCTCCCCC chr9:140512337-140512417 7 2.84e-04 TGCGCT GTCTATGC TGGACTTGAG chr9:108458833-108458913 36 2.84e-04 tagtggacag gtctatgc agtcctatcc chr6:161650348-161650428 59 3.13e-04 GAGAGTTACA GCATAGAC GCTGCAGAGT chr1:17767195-17767275 51 3.13e-04 GCGAGGGCCT GCATAGAC CCTAGTGAAC chr4:79617250-79617330 33 3.13e-04 taaagggact gcatagac aaagtatgag chr7:100487517-100487597 28 3.13e-04 CCCCGCTCCT GCATAGAC TCGGCCCCCG chr8:67045137-67045217 48 3.13e-04 TGCATATACT GCATAGAC CTGTGCTCTA chr17:26120379-26120459 9 3.13e-04 CTGAACCC GCATAGAC GCCTCTCATA chr21:44528353-44528433 53 3.13e-04 cgctgaagcc gcatagac ctgtctctcc chrX:154042244-154042324 13 3.13e-04 tatagggact gcatagac aaggtatgag chr20:29524944-29525024 16 3.13e-04 AATTGGGCAT GCATAGAC AGTGATGAAG chr7:10979017-10979097 52 3.13e-04 ATTAAAGATT GCATAGAC TTTTAGCTCT chr12:54429760-54429840 58 3.13e-04 GAAAGGAGCT GCATAGAC CAGTGCTGGA chr12:54476010-54476090 45 3.13e-04 AATTGGGCCT GCATAGAC AGAGATGAAG chr7:30325582-30325662 49 3.13e-04 TGCCGCTACC GCATAGAC GCGTGGTTTT chr15:93425193-93425273 18 4.40e-04 GCAACAGGCA GTCTACAA ATCCACAAAT chr19:29584033-29584113 43 4.40e-04 AGGATGACCC GCCTACGC GGCCGTTTCA chr9:115430697-115430777 71 4.40e-04 TATTTCTGGA GTCTACAA TG chr11:77851191-77851271 33 5.22e-04 CTAACGCTTA GTGtacaa atagcctacg chr2:12858504-12858584 13 5.59e-04 AAGAGTTGTC GTCTATAA GGTCCGCGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:46697312-46697392 2.8e-05 32_[+1]_40 chr7:92077502-92077582 2.8e-05 35_[+1]_37 chr4:10458943-10459023 2.8e-05 38_[+1]_34 chr1:162414513-162414593 2.8e-05 14_[+1]_58 chr1:31287352-31287432 2.8e-05 39_[+1]_33 chr14:71787798-71787878 2.8e-05 13_[+1]_59 chr19:40932191-40932271 2.8e-05 22_[+1]_50 chr12:76552708-76552788 2.8e-05 31_[+1]_41 chr2:9796588-9796668 2.8e-05 33_[+1]_39 chr22:18958975-18959055 2.8e-05 34_[+1]_38 chr14:65769019-65769099 2.8e-05 44_[+1]_28 chr5:201050-201130 2.8e-05 50_[+1]_22 chr10:134605963-13460604 2.8e-05 38_[+1]_34 chr11:118956070-11895615 2.8e-05 38_[+1]_34 chr4:3941907-3941987 2.8e-05 35_[+1]_37 chr6:37139196-37139276 2.8e-05 52_[+1]_20 chr11:72975595-72975675 2.8e-05 6_[+1]_66 chr1:39035937-39036017 2.8e-05 37_[+1]_35 chr5:32173542-32173622 2.8e-05 49_[+1]_23 chr1:168131178-168131258 2.8e-05 7_[+1]_65 chr1:24620871-24620951 2.8e-05 40_[+1]_32 chr6:20302942-20303022 2.8e-05 15_[+1]_57 chr13:20438972-20439052 2.8e-05 20_[+1]_52 chr12:132974110-13297419 2.8e-05 22_[+1]_50 chr18:45534927-45535007 2.8e-05 41_[+1]_31 chr14:99814722-99814802 2.8e-05 58_[+1]_14 chr16:84537827-84537907 2.8e-05 40_[+1]_32 chr3:81598645-81598725 2.8e-05 23_[+1]_49 chr22:42764679-42764759 2.8e-05 25_[+1]_47 chr18:53449097-53449177 2.8e-05 21_[+1]_51 chr8:144422089-144422169 2.8e-05 62_[+1]_10 chr1:221914351-221914431 2.8e-05 [+1]_72 chr10:134605635-13460571 2.8e-05 43_[+1]_29 chr18:77344587-77344667 2.8e-05 48_[+1]_24 chr16:9053888-9053968 2.8e-05 14_[+1]_58 chr19:55969583-55969663 2.8e-05 33_[+1]_39 chr12:42983028-42983108 2.8e-05 51_[+1]_21 chr22:50355416-50355496 2.8e-05 24_[+1]_48 chr1:94146371-94146451 2.8e-05 23_[+1]_49 chr1:24126298-24126378 5.7e-05 21_[+1]_51 chr19:2360511-2360591 5.7e-05 52_[+1]_20 chr1:246363755-246363835 5.7e-05 54_[+1]_18 chr17:48945167-48945247 5.7e-05 28_[+1]_44 chr9:44118326-44118406 5.7e-05 50_[+1]_22 chr17:44899225-44899305 5.7e-05 14_[+1]_58 chr19:49661666-49661746 5.7e-05 11_[+1]_61 chr15:102029598-10202967 5.7e-05 65_[+1]_7 chr19:11847997-11848077 5.7e-05 37_[+1]_35 chr1:246363553-246363633 5.7e-05 13_[+1]_59 chr17:79875462-79875542 5.7e-05 47_[+1]_25 chr1:31635737-31635817 5.7e-05 42_[+1]_30 chr1:162350401-162350481 5.7e-05 21_[+1]_51 chr9:33560392-33560472 5.7e-05 63_[+1]_9 chr19:6600728-6600808 5.7e-05 64_[+1]_8 chr2:237076443-237076523 5.7e-05 46_[+1]_26 chr1:9420883-9420963 5.7e-05 49_[+1]_23 chr9:6758761-6758841 5.7e-05 25_[+1]_47 chr1:1127981-1128061 5.7e-05 53_[+1]_19 chr17:6347066-6347146 5.7e-05 33_[+1]_39 chr16:46723984-46724064 5.7e-05 60_[+1]_12 chr22:20254691-20254771 5.7e-05 57_[+1]_15 chr20:49186192-49186272 5.7e-05 48_[+1]_24 chr1:26235615-26235695 5.7e-05 34_[+1]_38 chr10:88295520-88295600 5.7e-05 62_[+1]_10 chr2:239067949-239068029 5.7e-05 53_[+1]_19 chr18:55102136-55102216 6.7e-05 30_[+1]_42 chr4:25239827-25239907 6.7e-05 36_[+1]_36 chr1:27775646-27775726 6.7e-05 29_[+1]_43 chr12:54332954-54333034 6.7e-05 9_[+1]_63 chr14:102991624-10299170 6.7e-05 46_[+1]_26 chr7:116910011-116910091 8.9e-05 48_[+1]_24 chr16:22218367-22218447 8.9e-05 65_[+1]_7 chr20:52534469-52534549 0.00014 2_[+1]_70 chr8:22224819-22224899 0.00017 3_[+1]_69 chr11:66045449-66045529 0.00017 57_[+1]_15 chr6:160113880-160113960 0.00017 60_[+1]_12 chr7:155411442-155411522 0.00017 16_[+1]_56 chr22:50354396-50354476 0.00017 48_[+1]_24 chr12:113542005-11354208 0.00017 47_[+1]_25 chr11:86383349-86383429 0.00017 38_[+1]_34 chr2:145273584-145273664 0.00017 54_[+1]_18 chr2:176953103-176953183 0.00017 33_[+1]_39 chr1:47695352-47695432 0.00017 24_[+1]_48 chr2:14774427-14774507 0.00017 3_[+1]_69 chr7:26192688-26192768 0.00017 34_[+1]_38 chr3:184231592-184231672 0.00017 24_[+1]_48 chr1:26960369-26960449 0.00017 19_[+1]_53 chr2:173504605-173504685 0.00021 66_[+1]_6 chr11:47358946-47359026 0.00021 54_[+1]_18 chr1:934549-934629 0.00021 34_[+1]_38 chr2:27308623-27308703 0.00021 33_[+1]_39 chr14:68008568-68008648 0.00021 47_[+1]_25 chr12:132435107-13243518 0.00021 44_[+1]_28 chr17:46688002-46688082 0.00021 54_[+1]_18 chr1:52498646-52498726 0.00021 6_[+1]_66 chr21:36042199-36042279 0.00021 53_[+1]_19 chr17:46801204-46801284 0.00021 30_[+1]_42 chr3:128210859-128210939 0.00021 38_[+1]_34 chr10:120966305-12096638 0.00021 52_[+1]_20 chr16:75018371-75018451 0.00021 26_[+1]_46 chr19:8274694-8274774 0.00021 68_[+1]_4 chr22:43485138-43485218 0.00021 37_[+1]_35 chr17:77965996-77966076 0.00021 56_[+1]_16 chr3:193561465-193561545 0.00028 63_[+1]_9 chrX:68048846-68048926 0.00028 13_[+1]_59 chr10:43039378-43039458 0.00028 1_[+1]_71 chr5:135525184-135525264 0.00028 39_[+1]_33 chr7:148615470-148615550 0.00028 10_[+1]_62 chr9:44867067-44867147 0.00028 48_[+1]_24 chr12:53343009-53343089 0.00028 50_[+1]_22 chr2:198342689-198342769 0.00028 5_[+1]_67 chr19:52800748-52800828 0.00028 46_[+1]_26 chr5:95068970-95069050 0.00028 26_[+1]_46 chr3:156392854-156392934 0.00028 44_[+1]_28 chr9:140512337-140512417 0.00028 6_[+1]_66 chr9:108458833-108458913 0.00028 35_[+1]_37 chr6:161650348-161650428 0.00031 58_[+1]_14 chr1:17767195-17767275 0.00031 50_[+1]_22 chr4:79617250-79617330 0.00031 32_[+1]_40 chr7:100487517-100487597 0.00031 27_[+1]_45 chr8:67045137-67045217 0.00031 47_[+1]_25 chr17:26120379-26120459 0.00031 8_[+1]_64 chr21:44528353-44528433 0.00031 52_[+1]_20 chrX:154042244-154042324 0.00031 12_[+1]_60 chr20:29524944-29525024 0.00031 15_[+1]_57 chr7:10979017-10979097 0.00031 51_[+1]_21 chr12:54429760-54429840 0.00031 57_[+1]_15 chr12:54476010-54476090 0.00031 44_[+1]_28 chr7:30325582-30325662 0.00031 48_[+1]_24 chr15:93425193-93425273 0.00044 17_[+1]_55 chr19:29584033-29584113 0.00044 42_[+1]_30 chr9:115430697-115430777 0.00044 70_[+1]_2 chr11:77851191-77851271 0.00052 32_[+1]_40 chr2:12858504-12858584 0.00056 12_[+1]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTSTASAC width=8 seqs=134 chr17:46697312-46697392 ( 33) GTCTACAC 1 chr7:92077502-92077582 ( 36) GTCTACAC 1 chr4:10458943-10459023 ( 39) GTCTACAC 1 chr1:162414513-162414593 ( 15) GTCTACAC 1 chr1:31287352-31287432 ( 40) GTCTACAC 1 chr14:71787798-71787878 ( 14) GTCTACAC 1 chr19:40932191-40932271 ( 23) GTCTACAC 1 chr12:76552708-76552788 ( 32) GTCTACAC 1 chr2:9796588-9796668 ( 34) GTCTACAC 1 chr22:18958975-18959055 ( 35) GTCTACAC 1 chr14:65769019-65769099 ( 45) GTCTACAC 1 chr5:201050-201130 ( 51) GTCTACAC 1 chr10:134605963-13460604 ( 39) GTCTACAC 1 chr11:118956070-11895615 ( 39) GTCTACAC 1 chr4:3941907-3941987 ( 36) GTCTAGAC 1 chr6:37139196-37139276 ( 53) GTCTACAC 1 chr11:72975595-72975675 ( 7) GTCTACAC 1 chr1:39035937-39036017 ( 38) GTCTACAC 1 chr5:32173542-32173622 ( 50) GTCTACAC 1 chr1:168131178-168131258 ( 8) GTCTACAC 1 chr1:24620871-24620951 ( 41) GTCTACAC 1 chr6:20302942-20303022 ( 16) GTCTACAC 1 chr13:20438972-20439052 ( 21) GTCTACAC 1 chr12:132974110-13297419 ( 23) GTCTACAC 1 chr18:45534927-45535007 ( 42) GTCTACAC 1 chr14:99814722-99814802 ( 59) GTCTACAC 1 chr16:84537827-84537907 ( 41) GTCTACAC 1 chr3:81598645-81598725 ( 24) GTCTACAC 1 chr22:42764679-42764759 ( 26) GTCTACAC 1 chr18:53449097-53449177 ( 22) GTCTACAC 1 chr8:144422089-144422169 ( 63) GTCTACAC 1 chr1:221914351-221914431 ( 1) GTCTACAC 1 chr10:134605635-13460571 ( 44) GTCTACAC 1 chr18:77344587-77344667 ( 49) GTCTACAC 1 chr16:9053888-9053968 ( 15) GTCTACAC 1 chr19:55969583-55969663 ( 34) GTCTACAC 1 chr12:42983028-42983108 ( 52) GTCTACAC 1 chr22:50355416-50355496 ( 25) GTCTACAC 1 chr1:94146371-94146451 ( 24) GTCTACAC 1 chr1:24126298-24126378 ( 22) GTGTAGAC 1 chr19:2360511-2360591 ( 53) GTGTAGAC 1 chr1:246363755-246363835 ( 55) GTGTAGAC 1 chr17:48945167-48945247 ( 29) GTGTAGAC 1 chr9:44118326-44118406 ( 51) GTGTAGAC 1 chr17:44899225-44899305 ( 15) GTGTAGAC 1 chr19:49661666-49661746 ( 12) GTGTAGAC 1 chr15:102029598-10202967 ( 66) GTGTAGAC 1 chr19:11847997-11848077 ( 38) GTGTAGAC 1 chr1:246363553-246363633 ( 14) GTGTAGAC 1 chr17:79875462-79875542 ( 48) GTGTAGAC 1 chr1:31635737-31635817 ( 43) GTGTAGAC 1 chr1:162350401-162350481 ( 22) GTGTAGAC 1 chr9:33560392-33560472 ( 64) GTGTAGAC 1 chr19:6600728-6600808 ( 65) GTGTAGAC 1 chr2:237076443-237076523 ( 47) GTGTAGAC 1 chr1:9420883-9420963 ( 50) GTGTAGAC 1 chr9:6758761-6758841 ( 26) GTGTAGAC 1 chr1:1127981-1128061 ( 54) GTGTAGAC 1 chr17:6347066-6347146 ( 34) GTGTAGAC 1 chr16:46723984-46724064 ( 61) GTGTAGAC 1 chr22:20254691-20254771 ( 58) GTGTAGAC 1 chr20:49186192-49186272 ( 49) GTGTAGAC 1 chr1:26235615-26235695 ( 35) GTGTAGAC 1 chr10:88295520-88295600 ( 63) GTGTACAC 1 chr2:239067949-239068029 ( 54) GTGTAGAC 1 chr18:55102136-55102216 ( 31) GTCTATAC 1 chr4:25239827-25239907 ( 37) GTCTATAC 1 chr1:27775646-27775726 ( 30) GTCTATAC 1 chr12:54332954-54333034 ( 10) GTCTATAC 1 chr14:102991624-10299170 ( 47) GTCTATAC 1 chr7:116910011-116910091 ( 49) GTATAGAC 1 chr16:22218367-22218447 ( 66) GTATAGAC 1 chr20:52534469-52534549 ( 3) GCCTACAC 1 chr8:22224819-22224899 ( 4) GTCTACGC 1 chr11:66045449-66045529 ( 58) GTCTACGC 1 chr6:160113880-160113960 ( 61) GTCTACGC 1 chr7:155411442-155411522 ( 17) GTCTACGC 1 chr22:50354396-50354476 ( 49) GTCTACGC 1 chr12:113542005-11354208 ( 48) GTCTACGC 1 chr11:86383349-86383429 ( 39) GTCTACGC 1 chr2:145273584-145273664 ( 55) GTCTACGC 1 chr2:176953103-176953183 ( 34) GTCTACGC 1 chr1:47695352-47695432 ( 25) GTCTACGC 1 chr2:14774427-14774507 ( 4) GTCTACGC 1 chr7:26192688-26192768 ( 35) GTCTACGC 1 chr3:184231592-184231672 ( 25) GTCTACGC 1 chr1:26960369-26960449 ( 20) GTCTACGC 1 chr2:173504605-173504685 ( 67) GCGTAGAC 1 chr11:47358946-47359026 ( 55) GCGTAGAC 1 chr1:934549-934629 ( 35) GCGTAGAC 1 chr2:27308623-27308703 ( 34) GCGTAGAC 1 chr14:68008568-68008648 ( 48) GCGTAGAC 1 chr12:132435107-13243518 ( 45) GCGTAGAC 1 chr17:46688002-46688082 ( 55) GCGTAGAC 1 chr1:52498646-52498726 ( 7) GCGTAGAC 1 chr21:36042199-36042279 ( 54) GCGTAGAC 1 chr17:46801204-46801284 ( 31) GCGTAGAC 1 chr3:128210859-128210939 ( 39) GCGTAGAC 1 chr10:120966305-12096638 ( 53) GCGTAGAC 1 chr16:75018371-75018451 ( 27) GCGTAGAC 1 chr19:8274694-8274774 ( 69) GCGTAGAC 1 chr22:43485138-43485218 ( 38) GCGTAGAC 1 chr17:77965996-77966076 ( 57) GCGTAGAC 1 chr3:193561465-193561545 ( 64) GTCTATGC 1 chrX:68048846-68048926 ( 14) GTCTATGC 1 chr10:43039378-43039458 ( 2) GTCTATGC 1 chr5:135525184-135525264 ( 40) GTCTATGC 1 chr7:148615470-148615550 ( 11) GTCTATGC 1 chr9:44867067-44867147 ( 49) GTCTATGC 1 chr12:53343009-53343089 ( 51) GTCTATGC 1 chr2:198342689-198342769 ( 6) GTCTATGC 1 chr19:52800748-52800828 ( 47) GTCTATGC 1 chr5:95068970-95069050 ( 27) GTCTATGC 1 chr3:156392854-156392934 ( 45) GTCTATGC 1 chr9:140512337-140512417 ( 7) GTCTATGC 1 chr9:108458833-108458913 ( 36) GTCTATGC 1 chr6:161650348-161650428 ( 59) GCATAGAC 1 chr1:17767195-17767275 ( 51) GCATAGAC 1 chr4:79617250-79617330 ( 33) GCATAGAC 1 chr7:100487517-100487597 ( 28) GCATAGAC 1 chr8:67045137-67045217 ( 48) GCATAGAC 1 chr17:26120379-26120459 ( 9) GCATAGAC 1 chr21:44528353-44528433 ( 53) GCATAGAC 1 chrX:154042244-154042324 ( 13) GCATAGAC 1 chr20:29524944-29525024 ( 16) GCATAGAC 1 chr7:10979017-10979097 ( 52) GCATAGAC 1 chr12:54429760-54429840 ( 58) GCATAGAC 1 chr12:54476010-54476090 ( 45) GCATAGAC 1 chr7:30325582-30325662 ( 49) GCATAGAC 1 chr15:93425193-93425273 ( 18) GTCTACAA 1 chr19:29584033-29584113 ( 43) GCCTACGC 1 chr9:115430697-115430777 ( 71) GTCTACAA 1 chr11:77851191-77851271 ( 33) GTGTACAA 1 chr2:12858504-12858584 ( 13) GTCTATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.43997 E= 3.8e-120 -1371 -1371 181 -1371 -1371 -29 -1371 185 -96 100 17 -1371 -1371 -1371 -1371 223 220 -1371 -1371 -1371 -1371 61 57 -59 186 -1371 -45 -1371 -286 177 -1371 -1371 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 134 E= 3.8e-120 0.000000 0.000000 1.000000 0.000000 0.000000 0.231343 0.000000 0.768657 0.111940 0.567164 0.320896 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.432836 0.425373 0.141791 0.791045 0.000000 0.208955 0.000000 0.029851 0.970149 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTSTASAC MEME-1 regular expression -------------------------------------------------------------------------------- G[TC][CG]TA[CG][AG]C -------------------------------------------------------------------------------- Time 4.76 secs. ******************************************************************************** ******************************************************************************** MOTIF ATCCGGAT MEME-2 width = 8 sites = 32 llr = 272 E-value = 4.2e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 91::11a: pos.-specific C 1:79:::: probability G ::1:99:2 matrix T :921:::8 bits 2.2 * 2.0 * 1.8 ** * 1.6 ** ** Relative 1.3 ** ***** Entropy 1.1 ** ***** (12.3 bits) 0.9 ** ***** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATCCGGAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:120497074-120497154 44 1.41e-05 AAGAGCAACT ATCCGGAT GAATGAAGTC chr14:60952041-60952121 53 1.41e-05 TGCAACAAGC ATCCGGAT CTTCCAGGGT chrX:135827173-135827253 10 1.41e-05 ggagcttca atccggat ttttgcccca chr19:59030487-59030567 19 1.41e-05 cagactacgg atccggat acaccacccc chr12:132379247-13237932 34 1.41e-05 tcggagtcgg atccggat tcggaTTAGC chr5:140792523-140792603 32 1.41e-05 CCAGAGCTCA ATCCGGAT TCTCAGGGCT chr12:56334145-56334225 19 1.41e-05 TCAGAAAAAG ATCCGGAT CTACCACAGT chr7:80791206-80791286 50 2.48e-05 cgtgataaga attcggat ctgcccctga chr11:77851191-77851271 66 2.48e-05 tgttaaaata attcggat tctgatt chr3:197806801-197806881 47 2.48e-05 ACCTGGGTGG ATTCGGAT GTAAAACCGA chr6:126069869-126069949 16 3.54e-05 GGAGGCAATT ATCTGGAT AATCCAAGCC chr19:1752124-1752204 55 3.54e-05 GGGCCAGGAA ATCTGGAT GCAGGTGCAA chr18:53449097-53449177 51 3.54e-05 AAAAGAAAAT ATCTGGAT TATTTCCTTT chr12:54476010-54476090 27 3.54e-05 AGCCCCGAGG ATCTGGAT AATTGGGCCT chr19:49956240-49956320 55 5.44e-05 ATCCTCATAA ATCCGGAG CCCTCCTAAC chr6:17281493-17281573 44 5.44e-05 AATCCAGACG ATCCGGAG AATTTGTACG chr10:7425533-7425613 40 5.44e-05 CTATAAAACT ATCCGGAG TGGGTCGGCA chr20:278808-278888 32 6.51e-05 CTACGCGGTC ATCCAGAT CCCGGGCAGC chr9:44867067-44867147 67 6.51e-05 AGGCCCAATT ATCCAGAT CCTCAG chr17:37879803-37879883 36 7.94e-05 CCAGGCGCAG ATGCGGAT CCTGAAAGAG chr1:90099679-90099759 64 7.94e-05 CCGCATCCTA ATGCGGAT ATTTCAGAG chr22:26969344-26969424 26 7.94e-05 CGCCCCAACA ATGCGGAT TTGAGTTTCC chr9:115430697-115430777 53 9.02e-05 AGTTTTAAAA ATCCGAAT TATTTCTGGA chr18:18690762-18690842 26 9.02e-05 CCAGCAAACA ATCCGAAT TCACTTCCGA chr4:174448243-174448323 56 1.13e-04 CACATAAATA AACCGGAT GATTCCAAAT chr7:10979017-10979097 25 1.13e-04 GTATTTAGGG AACCGGAT TTAAGACAGA chr1:120402429-120402509 46 1.45e-04 CAAGTCCTCg attcggag tgtagcagct chr5:95997635-95997715 60 1.45e-04 GTATCTACTT CTCCGGAT TGTTGGGAGG chr19:40932191-40932271 60 1.45e-04 caaattccga ctccggat tccccactca chr8:38269272-38269352 27 1.45e-04 AACCAAAAAC ATTCGGAG AATTTTCCCC chr12:95868443-95868523 42 1.64e-04 TCCGATTCTG ATCCGTAT TGCCGCGTCT chr20:52534469-52534549 44 1.64e-04 TGAAGCAATT ATTCAGAT AATCCATAGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:120497074-120497154 1.4e-05 43_[+2]_29 chr14:60952041-60952121 1.4e-05 52_[+2]_20 chrX:135827173-135827253 1.4e-05 9_[+2]_63 chr19:59030487-59030567 1.4e-05 18_[+2]_54 chr12:132379247-13237932 1.4e-05 33_[+2]_39 chr5:140792523-140792603 1.4e-05 31_[+2]_41 chr12:56334145-56334225 1.4e-05 18_[+2]_54 chr7:80791206-80791286 2.5e-05 49_[+2]_23 chr11:77851191-77851271 2.5e-05 65_[+2]_7 chr3:197806801-197806881 2.5e-05 46_[+2]_26 chr6:126069869-126069949 3.5e-05 15_[+2]_57 chr19:1752124-1752204 3.5e-05 54_[+2]_18 chr18:53449097-53449177 3.5e-05 50_[+2]_22 chr12:54476010-54476090 3.5e-05 26_[+2]_46 chr19:49956240-49956320 5.4e-05 54_[+2]_18 chr6:17281493-17281573 5.4e-05 43_[+2]_29 chr10:7425533-7425613 5.4e-05 39_[+2]_33 chr20:278808-278888 6.5e-05 31_[+2]_41 chr9:44867067-44867147 6.5e-05 66_[+2]_6 chr17:37879803-37879883 7.9e-05 35_[+2]_37 chr1:90099679-90099759 7.9e-05 63_[+2]_9 chr22:26969344-26969424 7.9e-05 25_[+2]_47 chr9:115430697-115430777 9e-05 52_[+2]_20 chr18:18690762-18690842 9e-05 25_[+2]_47 chr4:174448243-174448323 0.00011 55_[+2]_17 chr7:10979017-10979097 0.00011 24_[+2]_48 chr1:120402429-120402509 0.00015 45_[+2]_27 chr5:95997635-95997715 0.00015 59_[+2]_13 chr19:40932191-40932271 0.00015 59_[+2]_13 chr8:38269272-38269352 0.00015 26_[+2]_46 chr12:95868443-95868523 0.00016 41_[+2]_31 chr20:52534469-52534549 0.00016 43_[+2]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATCCGGAT width=8 seqs=32 chr7:120497074-120497154 ( 44) ATCCGGAT 1 chr14:60952041-60952121 ( 53) ATCCGGAT 1 chrX:135827173-135827253 ( 10) ATCCGGAT 1 chr19:59030487-59030567 ( 19) ATCCGGAT 1 chr12:132379247-13237932 ( 34) ATCCGGAT 1 chr5:140792523-140792603 ( 32) ATCCGGAT 1 chr12:56334145-56334225 ( 19) ATCCGGAT 1 chr7:80791206-80791286 ( 50) ATTCGGAT 1 chr11:77851191-77851271 ( 66) ATTCGGAT 1 chr3:197806801-197806881 ( 47) ATTCGGAT 1 chr6:126069869-126069949 ( 16) ATCTGGAT 1 chr19:1752124-1752204 ( 55) ATCTGGAT 1 chr18:53449097-53449177 ( 51) ATCTGGAT 1 chr12:54476010-54476090 ( 27) ATCTGGAT 1 chr19:49956240-49956320 ( 55) ATCCGGAG 1 chr6:17281493-17281573 ( 44) ATCCGGAG 1 chr10:7425533-7425613 ( 40) ATCCGGAG 1 chr20:278808-278888 ( 32) ATCCAGAT 1 chr9:44867067-44867147 ( 67) ATCCAGAT 1 chr17:37879803-37879883 ( 36) ATGCGGAT 1 chr1:90099679-90099759 ( 64) ATGCGGAT 1 chr22:26969344-26969424 ( 26) ATGCGGAT 1 chr9:115430697-115430777 ( 53) ATCCGAAT 1 chr18:18690762-18690842 ( 26) ATCCGAAT 1 chr4:174448243-174448323 ( 56) AACCGGAT 1 chr7:10979017-10979097 ( 25) AACCGGAT 1 chr1:120402429-120402509 ( 46) ATTCGGAG 1 chr5:95997635-95997715 ( 60) CTCCGGAT 1 chr19:40932191-40932271 ( 60) CTCCGGAT 1 chr8:38269272-38269352 ( 27) ATTCGGAG 1 chr12:95868443-95868523 ( 42) ATCCGTAT 1 chr20:52534469-52534549 ( 44) ATTCAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.89106 E= 4.2e-003 211 -218 -1164 -1164 -180 -1164 -1164 214 -1164 134 -161 -18 -1164 163 -1164 -77 -121 -1164 166 -1164 -180 -1164 166 -277 220 -1164 -1164 -1164 -1164 -1164 -87 199 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 32 E= 4.2e-003 0.937500 0.062500 0.000000 0.000000 0.062500 0.000000 0.000000 0.937500 0.000000 0.718750 0.093750 0.187500 0.000000 0.875000 0.000000 0.125000 0.093750 0.000000 0.906250 0.000000 0.062500 0.000000 0.906250 0.031250 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.156250 0.843750 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCGGAT MEME-2 regular expression -------------------------------------------------------------------------------- ATCCGGAT -------------------------------------------------------------------------------- Time 8.26 secs. ******************************************************************************** ******************************************************************************** MOTIF CGTCTACA MEME-3 width = 8 sites = 8 llr = 89 E-value = 3.5e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::a:a pos.-specific C a::a::a: probability G :a:::::: matrix T ::a:a::: bits 2.2 * ** * 2.0 * ** * 1.8 ******** 1.6 ******** Relative 1.3 ******** Entropy 1.1 ******** (16.1 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CGTCTACA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:201050-201130 16 1.40e-05 AGCCAGCCAG CGTCTACA CAGCAGGCTG chr10:134605963-13460604 1 1.40e-05 . CGTCTACA CTGGGTCCGG chr11:63938017-63938097 14 1.40e-05 TCAGGGACAG CGTCTACA GGGTCtggag chr19:1752124-1752204 36 1.40e-05 TGTGTAGCCA CGTCTACA GGGGCCAGGA chr1:32398122-32398202 14 1.40e-05 AAACAAAAAC CGTCTACA TTCAAGTCAC chr1:221914351-221914431 30 1.40e-05 CATTCTCATC CGTCTACA CACGACCGTC chr10:134605635-13460571 6 1.40e-05 TGCAG CGTCTACA CTGGGTCCGG chr18:77344587-77344667 15 1.40e-05 CTGAAGGCCT CGTCTACA CAGCACTCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:201050-201130 1.4e-05 15_[+3]_57 chr10:134605963-13460604 1.4e-05 [+3]_72 chr11:63938017-63938097 1.4e-05 13_[+3]_59 chr19:1752124-1752204 1.4e-05 35_[+3]_37 chr1:32398122-32398202 1.4e-05 13_[+3]_59 chr1:221914351-221914431 1.4e-05 29_[+3]_43 chr10:134605635-13460571 1.4e-05 5_[+3]_67 chr18:77344587-77344667 1.4e-05 14_[+3]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGTCTACA width=8 seqs=8 chr5:201050-201130 ( 16) CGTCTACA 1 chr10:134605963-13460604 ( 1) CGTCTACA 1 chr11:63938017-63938097 ( 14) CGTCTACA 1 chr19:1752124-1752204 ( 36) CGTCTACA 1 chr1:32398122-32398202 ( 14) CGTCTACA 1 chr1:221914351-221914431 ( 30) CGTCTACA 1 chr10:134605635-13460571 ( 6) CGTCTACA 1 chr18:77344587-77344667 ( 15) CGTCTACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.155 E= 3.5e+001 -965 182 -965 -965 -965 -965 180 -965 -965 -965 -965 223 -965 182 -965 -965 -965 -965 -965 223 220 -965 -965 -965 -965 182 -965 -965 220 -965 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 3.5e+001 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTCTACA MEME-3 regular expression -------------------------------------------------------------------------------- CGTCTACA -------------------------------------------------------------------------------- Time 11.67 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTGTTTT MEME-4 width = 8 sites = 4 llr = 46 E-value = 1.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::3::: pos.-specific C :::::::: probability G :::a:::: matrix T aaa:8aaa bits 2.2 *** *** 2.0 *** *** 1.8 **** *** 1.6 **** *** Relative 1.3 ******** Entropy 1.1 ******** (16.6 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTGTTTT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:43039378-43039458 43 5.69e-06 caggcttgtc tttgtttt gcctgccttg chr1:47695352-47695432 3 5.69e-06 TG TTTGTTTT CTAAGCAGGG chr7:30325582-30325662 64 5.69e-06 GACGCGTGGT TTTGTTTT TAAACATCC chrX:135827173-135827253 37 1.15e-05 aCCACATGCC TTTGATTT GCTCCTTCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:43039378-43039458 5.7e-06 42_[+4]_30 chr1:47695352-47695432 5.7e-06 2_[+4]_70 chr7:30325582-30325662 5.7e-06 63_[+4]_9 chrX:135827173-135827253 1.2e-05 36_[+4]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTGTTTT width=8 seqs=4 chr10:43039378-43039458 ( 43) TTTGTTTT 1 chr1:47695352-47695432 ( 3) TTTGTTTT 1 chr7:30325582-30325662 ( 64) TTTGTTTT 1 chrX:135827173-135827253 ( 37) TTTGATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.8924 E= 1.4e+004 -865 -865 -865 223 -865 -865 -865 223 -865 -865 -865 223 -865 -865 180 -865 20 -865 -865 181 -865 -865 -865 223 -865 -865 -865 223 -865 -865 -865 223 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 4 E= 1.4e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.000000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGTTTT MEME-4 regular expression -------------------------------------------------------------------------------- TTTG[TA]TTT -------------------------------------------------------------------------------- Time 15.15 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCTGGGC MEME-5 width = 8 sites = 7 llr = 74 E-value = 1.7e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :aa::::a probability G ::::aaa: matrix T a::a:::: bits 2.2 * * 2.0 * * 1.8 ******** 1.6 ******** Relative 1.3 ******** Entropy 1.1 ******** (15.3 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCCTGGGC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:128171462-128171542 4 2.41e-05 GGG TCCTGGGC ACCAGCGGTT chr1:39035937-39036017 64 2.41e-05 CCCGGAGTTG TCCTGGGC TGCCAGCAC chr11:63938017-63938097 57 2.41e-05 agctttgacc tcctgggc tcaatcgatc chr2:176953103-176953183 23 2.41e-05 GATACTTTCT TCCTGGGC TCGGTCTACG chr12:132974110-13297419 52 2.41e-05 CCAGGGCCCC TCCTGGGC TTTCACCTGC chr17:60556217-60556297 17 2.41e-05 CGGAGGCGGG TCCTGGGC ACCAGCGGTT chr2:70781368-70781448 48 2.41e-05 AGCCGGATTG TCCTGGGC CGCAGTGGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:128171462-128171542 2.4e-05 3_[+5]_69 chr1:39035937-39036017 2.4e-05 63_[+5]_9 chr11:63938017-63938097 2.4e-05 56_[+5]_16 chr2:176953103-176953183 2.4e-05 22_[+5]_50 chr12:132974110-13297419 2.4e-05 51_[+5]_21 chr17:60556217-60556297 2.4e-05 16_[+5]_56 chr2:70781368-70781448 2.4e-05 47_[+5]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCTGGGC width=8 seqs=7 chr7:128171462-128171542 ( 4) TCCTGGGC 1 chr1:39035937-39036017 ( 64) TCCTGGGC 1 chr11:63938017-63938097 ( 57) TCCTGGGC 1 chr2:176953103-176953183 ( 23) TCCTGGGC 1 chr12:132974110-13297419 ( 52) TCCTGGGC 1 chr17:60556217-60556297 ( 17) TCCTGGGC 1 chr2:70781368-70781448 ( 48) TCCTGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1915 E= 1.7e+004 -945 -945 -945 223 -945 182 -945 -945 -945 182 -945 -945 -945 -945 -945 223 -945 -945 180 -945 -945 -945 180 -945 -945 -945 180 -945 -945 182 -945 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 1.7e+004 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGC MEME-5 regular expression -------------------------------------------------------------------------------- TCCTGGGC -------------------------------------------------------------------------------- Time 18.56 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:22218367-22218447 3.69e-02 65_[+1(8.87e-05)]_7 chr7:30325582-30325662 1.79e-03 63_[+4(5.69e-06)]_9 chr3:182698671-182698751 9.34e-01 80 chr9:108458833-108458913 3.38e-01 80 chr1:94146371-94146451 3.02e-03 23_[+1(2.81e-05)]_49 chr2:239067949-239068029 6.40e-03 53_[+1(5.65e-05)]_19 chr18:18690762-18690842 1.57e-01 25_[+2(9.02e-05)]_47 chr12:54476010-54476090 1.18e-02 26_[+2(3.54e-05)]_46 chr22:50355416-50355496 7.58e-03 24_[+1(2.81e-05)]_48 chr10:88295520-88295600 1.99e-02 62_[+1(5.65e-05)]_10 chr2:70781368-70781448 2.83e-02 47_[+5(2.41e-05)]_25 chr12:42983028-42983108 3.97e-04 51_[+1(2.81e-05)]_21 chr3:13035124-13035204 1.66e-01 80 chr14:102991624-10299170 3.59e-02 46_[+1(6.70e-05)]_26 chr19:55969583-55969663 8.00e-04 32_[+3(1.40e-05)]_40 chr17:60556217-60556297 2.05e-01 16_[+5(2.41e-05)]_56 chr17:77965996-77966076 9.06e-02 80 chr16:86531871-86531951 4.86e-02 80 chr1:26235615-26235695 2.12e-03 34_[+1(5.65e-05)]_38 chr16:9053888-9053968 9.03e-05 13_[+3(1.40e-05)]_59 chr18:77344587-77344667 2.21e-03 14_[+3(1.40e-05)]_25_[+3(1.40e-05)]_\ 25 chr12:54429760-54429840 1.80e-01 80 chr1:26960369-26960449 5.03e-02 80 chr10:134605635-13460571 2.23e-03 5_[+3(1.40e-05)]_29_[+3(1.40e-05)]_\ 30 chr3:184231592-184231672 3.11e-02 80 chr20:52534469-52534549 5.88e-03 80 chr7:116910011-116910091 8.69e-03 48_[+1(8.87e-05)]_24 chr12:56334145-56334225 5.12e-02 18_[+2(1.41e-05)]_54 chr12:95868443-95868523 1.44e-01 80 chr5:140792523-140792603 2.84e-02 31_[+2(1.41e-05)]_41 chr4:109684566-109684646 9.70e-01 80 chr9:140512337-140512417 3.61e-02 80 chr20:49186192-49186272 6.90e-03 7_[+1(5.65e-05)]_19_[+1(8.87e-05)]_\ 6_[+1(5.65e-05)]_24 chr3:197806801-197806881 1.08e-02 46_[+2(2.48e-05)]_26 chr7:10979017-10979097 4.36e-03 80 chr1:221914351-221914431 7.72e-04 [+1(2.81e-05)]_21_[+3(1.40e-05)]_43 chr22:43485138-43485218 1.52e-01 80 chr16:31146969-31147049 2.75e-01 80 chr12:133136744-13313682 9.04e-01 80 chr17:38948176-38948256 3.97e-01 80 chr22:26969344-26969424 2.01e-02 25_[+2(7.94e-05)]_47 chr19:8274694-8274774 2.50e-01 80 chr19:17798676-17798756 1.14e-01 80 chr8:144422089-144422169 1.73e-02 31_[+1(2.81e-05)]_23_[+1(2.81e-05)]_\ 10 chr19:17797467-17797547 8.00e-01 80 chr18:53449097-53449177 1.77e-06 20_[+3(1.40e-05)]_22_[+2(3.54e-05)]_\ 22 chr22:20254691-20254771 1.70e-02 57_[+1(5.65e-05)]_15 chr7:26192688-26192768 5.51e-02 80 chr16:87952564-87952644 3.85e-01 80 chr11:77851191-77851271 3.72e-03 65_[+2(2.48e-05)]_7 chr21:37694094-37694174 7.85e-02 80 chr16:46723984-46724064 9.22e-02 60_[+1(5.65e-05)]_12 chr12:54332954-54333034 1.01e-02 9_[+1(6.70e-05)]_63 chr16:75018371-75018451 1.69e-01 80 chr3:187456271-187456351 3.28e-01 80 chr22:42764679-42764759 1.68e-02 25_[+1(2.81e-05)]_47 chr3:156392854-156392934 3.28e-01 80 chr10:120966305-12096638 2.69e-01 80 chr3:81598645-81598725 8.85e-03 23_[+1(2.81e-05)]_49 chr16:84537827-84537907 3.22e-04 39_[+3(1.40e-05)]_33 chr1:26126422-26126502 5.88e-01 80 chr6:4812396-4812476 8.18e-02 80 chr3:128210859-128210939 1.58e-01 80 chr4:77872348-77872428 1.70e-01 80 chr17:6347066-6347146 1.16e-01 33_[+1(5.65e-05)]_39 chr12:132379247-13237932 8.82e-02 33_[+2(1.41e-05)]_39 chr11:10878408-10878488 2.31e-01 80 chr8:38269272-38269352 1.87e-01 80 chr17:1389358-1389438 9.74e-02 80 chr14:99814722-99814802 3.08e-03 57_[+3(1.40e-05)]_15 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-------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n09.farnam.hpc.yale.internal ********************************************************************************