******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF766.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr10:30883106-30883186 1.0000 80 chr1:206859260-206859340 1.0000 80 chr5:73927642-73927722 1.0000 80 chrX:151047207-151047287 1.0000 80 chr14:103154804-10315488 1.0000 80 chr15:40164804-40164884 1.0000 80 chr8:132828816-132828896 1.0000 80 chr4:173027197-173027277 1.0000 80 chr15:89622668-89622748 1.0000 80 chr2:65578023-65578103 1.0000 80 chr2:179090349-179090429 1.0000 80 chr12:111298686-11129876 1.0000 80 chr5:154358066-154358146 1.0000 80 chr7:130776006-130776086 1.0000 80 chr6:27192710-27192790 1.0000 80 chr2:136657269-136657349 1.0000 80 chr12:52405727-52405807 1.0000 80 chr22:29959894-29959974 1.0000 80 chr20:47404424-47404504 1.0000 80 chr3:186400702-186400782 1.0000 80 chr6:15377368-15377448 1.0000 80 chr14:24865606-24865686 1.0000 80 chr7:105461390-105461470 1.0000 80 chr1:38813595-38813675 1.0000 80 chr2:100250284-100250364 1.0000 80 chr4:37658467-37658547 1.0000 80 chr10:127383611-12738369 1.0000 80 chr8:29208180-29208260 1.0000 80 chr7:47716870-47716950 1.0000 80 chr1:53576335-53576415 1.0000 80 chr2:99039073-99039153 1.0000 80 chr8:38039445-38039525 1.0000 80 chr6:6830506-6830586 1.0000 80 chr7:139896878-139896958 1.0000 80 chr3:43295711-43295791 1.0000 80 chr8:59562381-59562461 1.0000 80 chr21:36810999-36811079 1.0000 80 chr20:49812027-49812107 1.0000 80 chr5:78436560-78436640 1.0000 80 chr11:69333320-69333400 1.0000 80 chr1:8310024-8310104 1.0000 80 chr1:53887010-53887090 1.0000 80 chr12:106289210-10628929 1.0000 80 chr1:174952481-174952561 1.0000 80 chr21:30471987-30472067 1.0000 80 chr6:143580277-143580357 1.0000 80 chr11:33907311-33907391 1.0000 80 chr8:8230169-8230249 1.0000 80 chr22:41972997-41973077 1.0000 80 chr17:58663766-58663846 1.0000 80 chr17:13288903-13288983 1.0000 80 chr2:209260150-209260230 1.0000 80 chr15:41943158-41943238 1.0000 80 chr1:247089466-247089546 1.0000 80 chr9:114810117-114810197 1.0000 80 chr19:46585648-46585728 1.0000 80 chr6:14328520-14328600 1.0000 80 chr8:27949239-27949319 1.0000 80 chr1:15571382-15571462 1.0000 80 chr2:48515218-48515298 1.0000 80 chr17:20883175-20883255 1.0000 80 chr8:117904119-117904199 1.0000 80 chr17:28872231-28872311 1.0000 80 chr16:79791113-79791193 1.0000 80 chr10:99223469-99223549 1.0000 80 chr6:150569065-150569145 1.0000 80 chr9:5627330-5627410 1.0000 80 chr3:128058607-128058687 1.0000 80 chr12:101801009-10180108 1.0000 80 chr22:40659302-40659382 1.0000 80 chr8:48590414-48590494 1.0000 80 chr1:168308001-168308081 1.0000 80 chr2:16853113-16853193 1.0000 80 chr20:23206173-23206253 1.0000 80 chr20:37427081-37427161 1.0000 80 chr22:22805004-22805084 1.0000 80 chr8:37927252-37927332 1.0000 80 chr4:106394601-106394681 1.0000 80 chr15:64316999-64317079 1.0000 80 chr1:24174135-24174215 1.0000 80 chr7:73548741-73548821 1.0000 80 chr8:8255537-8255617 1.0000 80 chr19:46174184-46174264 1.0000 80 chr8:134581252-134581332 1.0000 80 chr2:149901200-149901280 1.0000 80 chr3:47161087-47161167 1.0000 80 chr11:33907112-33907192 1.0000 80 chr22:27041355-27041435 1.0000 80 chr3:10227953-10228033 1.0000 80 chr1:21736645-21736725 1.0000 80 chr7:108175757-108175837 1.0000 80 chr13:28930300-28930380 1.0000 80 chr7:95076091-95076171 1.0000 80 chr12:57381438-57381518 1.0000 80 chr10:44094816-44094896 1.0000 80 chr16:85603556-85603636 1.0000 80 chr12:98825012-98825092 1.0000 80 chr1:166166511-166166591 1.0000 80 chr18:29282541-29282621 1.0000 80 chr4:14889768-14889848 1.0000 80 chr3:176999202-176999282 1.0000 80 chr18:72675961-72676041 1.0000 80 chrX:41420441-41420521 1.0000 80 chr1:227523388-227523468 1.0000 80 chr7:104771164-104771244 1.0000 80 chr7:150132516-150132596 1.0000 80 chr1:33703371-33703451 1.0000 80 chr2:217313707-217313787 1.0000 80 chr17:38717270-38717350 1.0000 80 chr5:134318134-134318214 1.0000 80 chr1:181070741-181070821 1.0000 80 chr1:41040720-41040800 1.0000 80 chr1:39243328-39243408 1.0000 80 chr6:39948976-39949056 1.0000 80 chr5:79566479-79566559 1.0000 80 chr1:18756377-18756457 1.0000 80 chr8:33209150-33209230 1.0000 80 chr14:96012223-96012303 1.0000 80 chr5:179758313-179758393 1.0000 80 chr21:40794534-40794614 1.0000 80 chr15:60691221-60691301 1.0000 80 chr16:14222013-14222093 1.0000 80 chr5:177619918-177619998 1.0000 80 chr6:88881137-88881217 1.0000 80 chr10:81164204-81164284 1.0000 80 chr17:19963211-19963291 1.0000 80 chr5:65178320-65178400 1.0000 80 chr1:205127504-205127584 1.0000 80 chr7:144559818-144559898 1.0000 80 chr1:71546289-71546369 1.0000 80 chr8:125993894-125993974 1.0000 80 chr3:195908841-195908921 1.0000 80 chr5:158730379-158730459 1.0000 80 chr10:15224664-15224744 1.0000 80 chr1:68382171-68382251 1.0000 80 chr9:130285812-130285892 1.0000 80 chr8:124263477-124263557 1.0000 80 chr15:83639047-83639127 1.0000 80 chr6:141188624-141188704 1.0000 80 chr1:60144782-60144862 1.0000 80 chr6:119782511-119782591 1.0000 80 chr1:161676963-161677043 1.0000 80 chr7:20251091-20251171 1.0000 80 chr3:171931147-171931227 1.0000 80 chr1:16669466-16669546 1.0000 80 chr7:92624362-92624442 1.0000 80 chr12:116796872-11679695 1.0000 80 chr12:69865588-69865668 1.0000 80 chr7:116848476-116848556 1.0000 80 chr1:174846377-174846457 1.0000 80 chr2:153097246-153097326 1.0000 80 chr5:77973829-77973909 1.0000 80 chr1:227523600-227523680 1.0000 80 chr1:244417952-244418032 1.0000 80 chr21:36568581-36568661 1.0000 80 chr3:31514554-31514634 1.0000 80 chr8:105606320-105606400 1.0000 80 chr14:31496072-31496152 1.0000 80 chrX:123096854-123096934 1.0000 80 chr3:43368974-43369054 1.0000 80 chr2:65802304-65802384 1.0000 80 chr6:14721348-14721428 1.0000 80 chr12:29672633-29672713 1.0000 80 chr20:16452777-16452857 1.0000 80 chr15:68695895-68695975 1.0000 80 chr16:11428841-11428921 1.0000 80 chr6:39189700-39189780 1.0000 80 chr21:40794747-40794827 1.0000 80 chr16:69899809-69899889 1.0000 80 chr18:1003650-1003730 1.0000 80 chr4:103541959-103542039 1.0000 80 chr12:113660646-11366072 1.0000 80 chr2:46451996-46452076 1.0000 80 chr10:90713582-90713662 1.0000 80 chr2:173111428-173111508 1.0000 80 chr21:47020372-47020452 1.0000 80 chr1:237077898-237077978 1.0000 80 chr8:134588408-134588488 1.0000 80 chr10:95924914-95924994 1.0000 80 chr18:1464643-1464723 1.0000 80 chr9:100937003-100937083 1.0000 80 chrX:40163243-40163323 1.0000 80 chr1:39856152-39856232 1.0000 80 chr6:53349546-53349626 1.0000 80 chr19:35759281-35759361 1.0000 80 chr15:80346692-80346772 1.0000 80 chr17:73266616-73266696 1.0000 80 chr1:247609209-247609289 1.0000 80 chr17:72426854-72426934 1.0000 80 chr3:57926995-57927075 1.0000 80 chr1:33862248-33862328 1.0000 80 chr4:122875211-122875291 1.0000 80 chr5:41738895-41738975 1.0000 80 chr1:230312958-230313038 1.0000 80 chr5:72114902-72114982 1.0000 80 chr5:6408116-6408196 1.0000 80 chr15:70717285-70717365 1.0000 80 chr19:29026307-29026387 1.0000 80 chr12:116720277-11672035 1.0000 80 chr1:12805149-12805229 1.0000 80 chr7:135883106-135883186 1.0000 80 chr19:10399357-10399437 1.0000 80 chr21:35964841-35964921 1.0000 80 chr2:17830010-17830090 1.0000 80 chr7:143110960-143111040 1.0000 80 chr19:45083076-45083156 1.0000 80 chr10:23026653-23026733 1.0000 80 chr12:54701038-54701118 1.0000 80 chr5:175874921-175875001 1.0000 80 chr17:65989814-65989894 1.0000 80 chr2:3252663-3252743 1.0000 80 chr10:49614507-49614587 1.0000 80 chr17:13981472-13981552 1.0000 80 chr21:35964640-35964720 1.0000 80 chr17:40895826-40895906 1.0000 80 chr7:10688075-10688155 1.0000 80 chr16:53537486-53537566 1.0000 80 chr2:10091600-10091680 1.0000 80 chr12:47672049-47672129 1.0000 80 chr3:157170142-157170222 1.0000 80 chr16:68766049-68766129 1.0000 80 chr12:47638840-47638920 1.0000 80 chr6:69345077-69345157 1.0000 80 chr6:26553678-26553758 1.0000 80 chr6:40132380-40132460 1.0000 80 chr18:29598481-29598561 1.0000 80 chr8:41649788-41649868 1.0000 80 chr8:100782619-100782699 1.0000 80 chr4:99390127-99390207 1.0000 80 chr1:149973414-149973494 1.0000 80 chr19:36207886-36207966 1.0000 80 chr4:38619161-38619241 1.0000 80 chr21:44394984-44395064 1.0000 80 chr10:29672429-29672509 1.0000 80 chr12:98927630-98927710 1.0000 80 chr1:40866215-40866295 1.0000 80 chr22:22378254-22378334 1.0000 80 chr2:101925451-101925531 1.0000 80 chr16:12510404-12510484 1.0000 80 chr15:35967189-35967269 1.0000 80 chr1:40367569-40367649 1.0000 80 chr10:73119403-73119483 1.0000 80 chr16:11188196-11188276 1.0000 80 chr18:5295265-5295345 1.0000 80 chr2:161851097-161851177 1.0000 80 chr18:3639570-3639650 1.0000 80 chr17:44344238-44344318 1.0000 80 chr19:36208086-36208166 1.0000 80 chr17:13498199-13498279 1.0000 80 chr4:2384572-2384652 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF766/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF766.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.265 C 0.23 G 0.241 T 0.264 Background letter frequencies (from file dataset with add-one prior applied): A 0.265 C 0.23 G 0.241 T 0.264 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GAGGTTTM MEME-1 width = 8 sites = 121 llr = 1091 E-value = 1.6e-153 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 Description -------------------------------------------------------------------------------- Simplified A 28:::::5 pos.-specific C :::::::5 probability G 81aa:::: matrix T :1::aaa: bits 2.1 * 1.9 **** 1.7 ***** 1.5 * ***** Relative 1.3 * ***** Entropy 1.1 ******* (13.0 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAGGTTTA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr18:3639570-3639650 39 1.57e-05 GATTACAGAT GAGGTTTC TGAAGGGCCA chr2:161851097-161851177 66 1.57e-05 AAATACCGCA GAGGTTTC TTGACAC chr16:12510404-12510484 46 1.57e-05 ataaagagaa gaggtttc tttggctccc chr1:40866215-40866295 40 1.57e-05 ctgaaggaga gaggtttc atgatgcata chr18:29598481-29598561 43 1.57e-05 CTCTGCAGTT GAGGTTTC AGGTTTCAAT chr16:68766049-68766129 21 1.57e-05 CAGCCCAGCA GAGGTTTC AGGAGCCTCT chr10:23026653-23026733 46 1.57e-05 ggcccagctg gaggtttc ttccactggt chr5:41738895-41738975 8 1.57e-05 GGATTTG GAGGTTTC TTAAACGGAT chr6:53349546-53349626 17 1.57e-05 ATTTATTAAG GAGGTTTC TTCTGGGTTA chr18:1464643-1464723 55 1.57e-05 CCAGAAGTTA GAGGTTTC ACTTGAATTG chr10:95924914-95924994 33 1.57e-05 taagtccgca gaggtttc ttctgccttt chr6:39189700-39189780 43 1.57e-05 TCCAATATCT GAGGTTTC ATCAAGCACA chr12:29672633-29672713 19 1.57e-05 TGCCCAACTA GAGGTTTC TTCTAGTTTT chr2:65802304-65802384 21 1.57e-05 CCttggtgaa gaggtttc tttggagaga chr3:43368974-43369054 52 1.57e-05 GAAAAAAATA GAGGTTTC TACCTAAAAT chrX:123096854-123096934 21 1.57e-05 AGGAATCATC GAGGTTTC TTGATGAAAC chr1:244417952-244418032 36 1.57e-05 GAGGGAAGAG GAGGTTTc ctgcttctct chr7:116848476-116848556 38 1.57e-05 CAGAAGCTTG GAGGTTTC TTCAAATATC chr1:161676963-161677043 33 1.57e-05 TCTAATCTGA GAGGTTTC ATGTTGAAGA chr15:83639047-83639127 33 1.57e-05 GGGCCTGAGA GAGGTTTC TTATCGCCAG chr3:195908841-195908921 35 1.57e-05 GAAGGGTTTT GAGGTTTC TCTTAACGAA chr1:71546289-71546369 12 1.57e-05 CCTGACTGGA GAGGTTTC CTATCGCTAA chr17:19963211-19963291 24 1.57e-05 accttgcaaa gaggtttc attcggcagc chr10:81164204-81164284 32 1.57e-05 GCAAAAGACA GAGGTTTC CTCCGCCACT chr21:40794534-40794614 20 1.57e-05 ACTTCAAAGA GAGGTTTC ACGTAACACA chr5:179758313-179758393 35 1.57e-05 AGCCAAGGCA GAGGTTTC TTCTCAACAC chr5:79566479-79566559 50 1.57e-05 ATAACTTTGA GAGGTTTC TCATTTAGAA chr1:181070741-181070821 27 1.57e-05 AAAGGAATGT GAGGTTTC TTTTCACTCC chr17:38717270-38717350 6 1.57e-05 GTCTC GAGGTTTC TTTAAAACAC chr1:33703371-33703451 21 1.57e-05 tatgtgagta gaggtTTC TCTTTCTTTA chr7:150132516-150132596 44 1.57e-05 CGAGGCTTGT GAGGTTTC TCATGTTCCT chrX:41420441-41420521 14 1.57e-05 CAACAGGAAA GAGGTTTC TGACACTGCT chr16:85603556-85603636 44 1.57e-05 AGAGAAAAGT GAGGTTTC TGGTGGCTTC chr12:57381438-57381518 10 1.57e-05 GGGGAAGGA GAGGTTTC CTGCAGAAAC chr2:149901200-149901280 49 1.57e-05 gatgttagtt gaggtttc ttgtagatac chr4:106394601-106394681 16 1.57e-05 CCCGCAGTAG GAGGTTTC TTACGCCTCT chr6:14328520-14328600 54 1.57e-05 catggctggg gaggtttc acaatcatga chr8:8230169-8230249 14 1.57e-05 ACTCCAGCAA GAGGTTTC TCAGGAACAC chr21:36810999-36811079 46 1.57e-05 agcaggaggt GAGGTTTC TTACCTCACC chr7:139896878-139896958 29 1.57e-05 agaaagaaaa gaggtttc tttggctcac chr1:53576335-53576415 52 1.57e-05 TCTTACAAAT GAGGTttc ttgaagttcc chr14:24865606-24865686 24 1.57e-05 tttcttcttg gaggtttc tcattcctca chr10:29672429-29672509 39 3.38e-05 aatccattta gaggttta ttttgcacac chr6:40132380-40132460 44 3.38e-05 AGGAGAAGTG GAGGTTTA TTGCCTGGCT chr16:53537486-53537566 27 3.38e-05 GACCTTCCCG GAGGTTTA TTCGCACAGC chr7:10688075-10688155 35 3.38e-05 gaaggaaaaa gaggttta attggaccta chr10:49614507-49614587 48 3.38e-05 AGGGGTGGCA GAGGTTTA TCCAGGCAGA chr7:143110960-143111040 44 3.38e-05 GTGTCTCTGA GAGGTTTA ATCTTTCCAA chr15:70717285-70717365 5 3.38e-05 aaaa gaggttta tttggctcat chr5:72114902-72114982 2 3.38e-05 a gaggttta ttatttagct chr3:57926995-57927075 7 3.38e-05 agaaaa gaggttta tttagctcac chr17:72426854-72426934 5 3.38e-05 GCCT GAGGTTTA TCGCTCCAGC chr8:134588408-134588488 16 3.38e-05 acaaaggaaa gaggttta atggactcac chr18:1003650-1003730 58 3.38e-05 gtaaagaaaa gaggttta tttggctcac chr16:11428841-11428921 2 3.38e-05 a gaggttta tttggctcac chr5:158730379-158730459 23 3.38e-05 gtaaagaaga gaggttta tttagctcac chr8:125993894-125993974 15 3.38e-05 ataaagaaaa gaggttta tttggctcat chr5:177619918-177619998 14 3.38e-05 ttaaagaaaa gaggttta tttagctcac chr16:14222013-14222093 36 3.38e-05 aatgaagtaa gaggttta ttctgtgcaa chr2:217313707-217313787 18 3.38e-05 acaaagaata gaggttta tttagctcat chr12:98825012-98825092 17 3.38e-05 aacttgaaaa gaggttta ttttgctcat chr7:95076091-95076171 50 3.38e-05 catagaaaga gaggttta ttttgaagac chr13:28930300-28930380 22 3.38e-05 gacctctctg gAGGTTTA TCACTGCTCT chr7:108175757-108175837 7 3.38e-05 agaaaa gaggttta attgactcac chr11:33907112-33907192 59 3.38e-05 CAATGGCAAT GAGGTTTA TTGTGCCCAA chr8:37927252-37927332 14 3.38e-05 gtaaagaaaa gaggttta tttggctcat chr2:16853113-16853193 10 3.38e-05 taaagaaaa gaggttta actggctcac chr3:128058607-128058687 18 3.38e-05 ttaaaaaaaa gaggttta atggactcac chr6:150569065-150569145 19 3.38e-05 tattataata gaggttta tttagctcac chr8:117904119-117904199 18 3.38e-05 atttaaaaaa gaggttta tttggctcat chr2:48515218-48515298 35 3.38e-05 gaaaaaaaaa gaggttta attggactta chr1:15571382-15571462 2 3.38e-05 a gaggttta tttggctcac chr8:27949239-27949319 29 3.38e-05 tctcagtctg gaggttta ttctgccaag chr15:41943158-41943238 9 3.38e-05 aaacaata gaggttta tttggctcac chr1:174952481-174952561 20 3.38e-05 TAAGTTTTTA GAGGTTTA TTTTTAAAGA chr12:106289210-10628929 6 3.38e-05 agaaa gaggttta ttggacttcc chr20:49812027-49812107 23 3.38e-05 acaaagaaga gaggttta tttggctcac chr8:29208180-29208260 40 3.38e-05 CCTCGGCTTA GAGGTTTA TTAATGCTCC chr1:38813595-38813675 17 3.38e-05 ataaagaaaa gaggttta ttttggctcg chr3:186400702-186400782 45 3.38e-05 acagaaggaa gaggttta ttgacttaca chr12:52405727-52405807 34 3.38e-05 ataaagaaaa gaggttta tttagctcat chr12:111298686-11129876 31 3.38e-05 ttaaagaaaa gaggttta attggcttac chr2:179090349-179090429 10 3.38e-05 caaaagaaa gaggttta ttggactttc chr15:40164804-40164884 6 3.38e-05 gaaaa gaggttta attggctcac chr14:103154804-10315488 30 3.38e-05 GAGTAGAGAA GAGGTTTA TTGGTGGTAG chr1:206859260-206859340 52 3.38e-05 TCGGATCGCA GAGGTTTA TTTAGCCTCG chr12:47672049-47672129 42 5.10e-05 TAAGAATATG AAGGTTTC TTCACCAGAG chr2:46451996-46452076 27 5.10e-05 ggtctgcctc aaggtttc tcatgaggtt chr20:16452777-16452857 3 5.10e-05 ta aaggtttc ttggacacag chr6:39948976-39949056 55 5.10e-05 TGAGTCAGCA AAGGTTTC TCAATGAACC chr17:13288903-13288983 34 5.10e-05 CAGAAATGTG AAGGTTTC TTAAAGCATG chr1:149973414-149973494 10 7.09e-05 ATGGACAAG AAGGTTTA TTGCCATCTC chr1:12805149-12805229 1 7.09e-05 . AAGGTTTA TTCTAACCTG chr1:247609209-247609289 69 7.09e-05 tttcttcttg aaggttta ataa chr10:15224664-15224744 53 7.09e-05 TCCAGAGAAA AAGGTTTA TCGCTGTCTC chr1:166166511-166166591 4 7.09e-05 GAG AAGGTTTA TCATTCTCAG chr3:171931147-171931227 48 1.01e-04 ATAAACCACA GTGGTTTC TCAAAGGCAG chr6:141188624-141188704 20 1.01e-04 GGAAGTTAAA GTGGTTTC TTGTGCCTTG chr3:10227953-10228033 38 1.01e-04 agattcagct gtggtttc tttggcaaca chr17:28872231-28872311 33 1.01e-04 agcaaagaaa gtggtttc ttgagataga chr17:13981472-13981552 5 1.35e-04 CTCA GTGGTTTA TGGTCACTAA chr4:122875211-122875291 40 1.35e-04 gcctctcttt gtggttta tagatggcta chr2:173111428-173111508 23 1.35e-04 ataaagaaaa gtggttta tttggctcac chr1:205127504-205127584 72 1.35e-04 TTCCCTCTTG GTGGTTTA G chr6:15377368-15377448 66 1.35e-04 ggaagaaaaa gtggttta attggac chr16:11188196-11188276 73 1.52e-04 CTACAGATGT GAGGTTTG chr15:35967189-35967269 3 2.15e-04 TT AGGGTTTC TCAAGCTCAG chr7:135883106-135883186 40 2.15e-04 attcagttcc agggtttc ttttaggttc chr5:77973829-77973909 16 2.15e-04 ATATTCTCTG AGGGTTTC TCACAGACAA chr7:20251091-20251171 15 2.15e-04 GAGAAACGGA GAGGTTGA TTTCAGATCA chr6:88881137-88881217 6 2.15e-04 TTTTG AGGGTTTC TTGGGGCTCA chr16:79791113-79791193 12 2.15e-04 ccaggcttga gaggttga tttgcagttg chr17:13498199-13498279 18 2.71e-04 CTATCATGAT GAGGTTTT TCAAAGTTCT chr12:98927630-98927710 28 2.71e-04 ATGAAATCCT AGGGTTTA TTTCTGAAGC chr3:157170142-157170222 40 2.71e-04 aagaggaacg agggttta ttaggcccaa chr12:69865588-69865668 30 2.71e-04 TGTGTAGATT AGGGTTTA TTCTGTAGTT chr1:227523388-227523468 13 2.71e-04 GAAGAGGGTC AGGGTTTA TTACACCAAC chr8:48590414-48590494 48 2.71e-04 GGGAAGTAAG AGGGTTTA TTCAAGAGAG chr22:27041355-27041435 12 2.85e-04 CTCACTCACT GAGGTTCC TAAGAAACCT chr19:29026307-29026387 4 3.16e-04 tta gagctttc ctgctttgca chr20:47404424-47404504 3 4.16e-04 CT GTGGTTTG TTTTATCTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:3639570-3639650 1.6e-05 38_[+1]_34 chr2:161851097-161851177 1.6e-05 65_[+1]_7 chr16:12510404-12510484 1.6e-05 45_[+1]_27 chr1:40866215-40866295 1.6e-05 39_[+1]_33 chr18:29598481-29598561 1.6e-05 42_[+1]_30 chr16:68766049-68766129 1.6e-05 20_[+1]_52 chr10:23026653-23026733 1.6e-05 45_[+1]_27 chr5:41738895-41738975 1.6e-05 7_[+1]_65 chr6:53349546-53349626 1.6e-05 16_[+1]_56 chr18:1464643-1464723 1.6e-05 54_[+1]_18 chr10:95924914-95924994 1.6e-05 32_[+1]_40 chr6:39189700-39189780 1.6e-05 42_[+1]_30 chr12:29672633-29672713 1.6e-05 18_[+1]_54 chr2:65802304-65802384 1.6e-05 20_[+1]_52 chr3:43368974-43369054 1.6e-05 51_[+1]_21 chrX:123096854-123096934 1.6e-05 20_[+1]_52 chr1:244417952-244418032 1.6e-05 35_[+1]_37 chr7:116848476-116848556 1.6e-05 37_[+1]_35 chr1:161676963-161677043 1.6e-05 32_[+1]_40 chr15:83639047-83639127 1.6e-05 32_[+1]_40 chr3:195908841-195908921 1.6e-05 34_[+1]_38 chr1:71546289-71546369 1.6e-05 11_[+1]_61 chr17:19963211-19963291 1.6e-05 23_[+1]_49 chr10:81164204-81164284 1.6e-05 31_[+1]_41 chr21:40794534-40794614 1.6e-05 19_[+1]_53 chr5:179758313-179758393 1.6e-05 34_[+1]_38 chr5:79566479-79566559 1.6e-05 49_[+1]_23 chr1:181070741-181070821 1.6e-05 26_[+1]_46 chr17:38717270-38717350 1.6e-05 5_[+1]_67 chr1:33703371-33703451 1.6e-05 20_[+1]_52 chr7:150132516-150132596 1.6e-05 43_[+1]_29 chrX:41420441-41420521 1.6e-05 13_[+1]_59 chr16:85603556-85603636 1.6e-05 43_[+1]_29 chr12:57381438-57381518 1.6e-05 9_[+1]_63 chr2:149901200-149901280 1.6e-05 48_[+1]_24 chr4:106394601-106394681 1.6e-05 15_[+1]_57 chr6:14328520-14328600 1.6e-05 53_[+1]_19 chr8:8230169-8230249 1.6e-05 13_[+1]_59 chr21:36810999-36811079 1.6e-05 45_[+1]_27 chr7:139896878-139896958 1.6e-05 28_[+1]_44 chr1:53576335-53576415 1.6e-05 51_[+1]_21 chr14:24865606-24865686 1.6e-05 23_[+1]_49 chr10:29672429-29672509 3.4e-05 38_[+1]_34 chr6:40132380-40132460 3.4e-05 43_[+1]_29 chr16:53537486-53537566 3.4e-05 26_[+1]_46 chr7:10688075-10688155 3.4e-05 34_[+1]_38 chr10:49614507-49614587 3.4e-05 47_[+1]_25 chr7:143110960-143111040 3.4e-05 43_[+1]_29 chr15:70717285-70717365 3.4e-05 4_[+1]_68 chr5:72114902-72114982 3.4e-05 1_[+1]_71 chr3:57926995-57927075 3.4e-05 6_[+1]_66 chr17:72426854-72426934 3.4e-05 4_[+1]_68 chr8:134588408-134588488 3.4e-05 15_[+1]_57 chr18:1003650-1003730 3.4e-05 57_[+1]_15 chr16:11428841-11428921 3.4e-05 1_[+1]_71 chr5:158730379-158730459 3.4e-05 22_[+1]_50 chr8:125993894-125993974 3.4e-05 14_[+1]_58 chr5:177619918-177619998 3.4e-05 13_[+1]_59 chr16:14222013-14222093 3.4e-05 35_[+1]_37 chr2:217313707-217313787 3.4e-05 17_[+1]_55 chr12:98825012-98825092 3.4e-05 16_[+1]_56 chr7:95076091-95076171 3.4e-05 49_[+1]_23 chr13:28930300-28930380 3.4e-05 21_[+1]_51 chr7:108175757-108175837 3.4e-05 6_[+1]_66 chr11:33907112-33907192 3.4e-05 58_[+1]_14 chr8:37927252-37927332 3.4e-05 13_[+1]_59 chr2:16853113-16853193 3.4e-05 9_[+1]_63 chr3:128058607-128058687 3.4e-05 17_[+1]_55 chr6:150569065-150569145 3.4e-05 18_[+1]_54 chr8:117904119-117904199 3.4e-05 17_[+1]_55 chr2:48515218-48515298 3.4e-05 34_[+1]_38 chr1:15571382-15571462 3.4e-05 1_[+1]_71 chr8:27949239-27949319 3.4e-05 28_[+1]_44 chr15:41943158-41943238 3.4e-05 8_[+1]_64 chr1:174952481-174952561 3.4e-05 19_[+1]_53 chr12:106289210-10628929 3.4e-05 5_[+1]_67 chr20:49812027-49812107 3.4e-05 22_[+1]_50 chr8:29208180-29208260 3.4e-05 39_[+1]_33 chr1:38813595-38813675 3.4e-05 16_[+1]_56 chr3:186400702-186400782 3.4e-05 44_[+1]_28 chr12:52405727-52405807 3.4e-05 33_[+1]_39 chr12:111298686-11129876 3.4e-05 30_[+1]_42 chr2:179090349-179090429 3.4e-05 9_[+1]_63 chr15:40164804-40164884 3.4e-05 5_[+1]_67 chr14:103154804-10315488 3.4e-05 29_[+1]_43 chr1:206859260-206859340 3.4e-05 51_[+1]_21 chr12:47672049-47672129 5.1e-05 41_[+1]_31 chr2:46451996-46452076 5.1e-05 26_[+1]_46 chr20:16452777-16452857 5.1e-05 2_[+1]_70 chr6:39948976-39949056 5.1e-05 54_[+1]_18 chr17:13288903-13288983 5.1e-05 33_[+1]_39 chr1:149973414-149973494 7.1e-05 9_[+1]_63 chr1:12805149-12805229 7.1e-05 [+1]_72 chr1:247609209-247609289 7.1e-05 68_[+1]_4 chr10:15224664-15224744 7.1e-05 52_[+1]_20 chr1:166166511-166166591 7.1e-05 3_[+1]_69 chr3:171931147-171931227 0.0001 47_[+1]_25 chr6:141188624-141188704 0.0001 19_[+1]_53 chr3:10227953-10228033 0.0001 37_[+1]_35 chr17:28872231-28872311 0.0001 32_[+1]_40 chr17:13981472-13981552 0.00014 4_[+1]_68 chr4:122875211-122875291 0.00014 39_[+1]_33 chr2:173111428-173111508 0.00014 22_[+1]_50 chr1:205127504-205127584 0.00014 71_[+1]_1 chr6:15377368-15377448 0.00014 65_[+1]_7 chr16:11188196-11188276 0.00015 72_[+1] chr15:35967189-35967269 0.00022 2_[+1]_70 chr7:135883106-135883186 0.00022 39_[+1]_33 chr5:77973829-77973909 0.00022 15_[+1]_57 chr7:20251091-20251171 0.00022 14_[+1]_58 chr6:88881137-88881217 0.00022 5_[+1]_67 chr16:79791113-79791193 0.00022 11_[+1]_61 chr17:13498199-13498279 0.00027 17_[+1]_55 chr12:98927630-98927710 0.00027 27_[+1]_45 chr3:157170142-157170222 0.00027 39_[+1]_33 chr12:69865588-69865668 0.00027 29_[+1]_43 chr1:227523388-227523468 0.00027 12_[+1]_60 chr8:48590414-48590494 0.00027 47_[+1]_25 chr22:27041355-27041435 0.00029 11_[+1]_61 chr19:29026307-29026387 0.00032 3_[+1]_69 chr20:47404424-47404504 0.00042 2_[+1]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAGGTTTM width=8 seqs=121 chr18:3639570-3639650 ( 39) GAGGTTTC 1 chr2:161851097-161851177 ( 66) GAGGTTTC 1 chr16:12510404-12510484 ( 46) GAGGTTTC 1 chr1:40866215-40866295 ( 40) GAGGTTTC 1 chr18:29598481-29598561 ( 43) GAGGTTTC 1 chr16:68766049-68766129 ( 21) GAGGTTTC 1 chr10:23026653-23026733 ( 46) GAGGTTTC 1 chr5:41738895-41738975 ( 8) GAGGTTTC 1 chr6:53349546-53349626 ( 17) GAGGTTTC 1 chr18:1464643-1464723 ( 55) GAGGTTTC 1 chr10:95924914-95924994 ( 33) GAGGTTTC 1 chr6:39189700-39189780 ( 43) GAGGTTTC 1 chr12:29672633-29672713 ( 19) GAGGTTTC 1 chr2:65802304-65802384 ( 21) GAGGTTTC 1 chr3:43368974-43369054 ( 52) GAGGTTTC 1 chrX:123096854-123096934 ( 21) GAGGTTTC 1 chr1:244417952-244418032 ( 36) GAGGTTTC 1 chr7:116848476-116848556 ( 38) GAGGTTTC 1 chr1:161676963-161677043 ( 33) GAGGTTTC 1 chr15:83639047-83639127 ( 33) GAGGTTTC 1 chr3:195908841-195908921 ( 35) GAGGTTTC 1 chr1:71546289-71546369 ( 12) GAGGTTTC 1 chr17:19963211-19963291 ( 24) GAGGTTTC 1 chr10:81164204-81164284 ( 32) GAGGTTTC 1 chr21:40794534-40794614 ( 20) GAGGTTTC 1 chr5:179758313-179758393 ( 35) GAGGTTTC 1 chr5:79566479-79566559 ( 50) GAGGTTTC 1 chr1:181070741-181070821 ( 27) GAGGTTTC 1 chr17:38717270-38717350 ( 6) GAGGTTTC 1 chr1:33703371-33703451 ( 21) GAGGTTTC 1 chr7:150132516-150132596 ( 44) GAGGTTTC 1 chrX:41420441-41420521 ( 14) GAGGTTTC 1 chr16:85603556-85603636 ( 44) GAGGTTTC 1 chr12:57381438-57381518 ( 10) GAGGTTTC 1 chr2:149901200-149901280 ( 49) GAGGTTTC 1 chr4:106394601-106394681 ( 16) GAGGTTTC 1 chr6:14328520-14328600 ( 54) GAGGTTTC 1 chr8:8230169-8230249 ( 14) GAGGTTTC 1 chr21:36810999-36811079 ( 46) GAGGTTTC 1 chr7:139896878-139896958 ( 29) GAGGTTTC 1 chr1:53576335-53576415 ( 52) GAGGTTTC 1 chr14:24865606-24865686 ( 24) GAGGTTTC 1 chr10:29672429-29672509 ( 39) GAGGTTTA 1 chr6:40132380-40132460 ( 44) GAGGTTTA 1 chr16:53537486-53537566 ( 27) GAGGTTTA 1 chr7:10688075-10688155 ( 35) GAGGTTTA 1 chr10:49614507-49614587 ( 48) GAGGTTTA 1 chr7:143110960-143111040 ( 44) GAGGTTTA 1 chr15:70717285-70717365 ( 5) GAGGTTTA 1 chr5:72114902-72114982 ( 2) GAGGTTTA 1 chr3:57926995-57927075 ( 7) GAGGTTTA 1 chr17:72426854-72426934 ( 5) GAGGTTTA 1 chr8:134588408-134588488 ( 16) GAGGTTTA 1 chr18:1003650-1003730 ( 58) GAGGTTTA 1 chr16:11428841-11428921 ( 2) GAGGTTTA 1 chr5:158730379-158730459 ( 23) GAGGTTTA 1 chr8:125993894-125993974 ( 15) GAGGTTTA 1 chr5:177619918-177619998 ( 14) GAGGTTTA 1 chr16:14222013-14222093 ( 36) GAGGTTTA 1 chr2:217313707-217313787 ( 18) GAGGTTTA 1 chr12:98825012-98825092 ( 17) GAGGTTTA 1 chr7:95076091-95076171 ( 50) GAGGTTTA 1 chr13:28930300-28930380 ( 22) GAGGTTTA 1 chr7:108175757-108175837 ( 7) GAGGTTTA 1 chr11:33907112-33907192 ( 59) GAGGTTTA 1 chr8:37927252-37927332 ( 14) GAGGTTTA 1 chr2:16853113-16853193 ( 10) GAGGTTTA 1 chr3:128058607-128058687 ( 18) GAGGTTTA 1 chr6:150569065-150569145 ( 19) GAGGTTTA 1 chr8:117904119-117904199 ( 18) GAGGTTTA 1 chr2:48515218-48515298 ( 35) GAGGTTTA 1 chr1:15571382-15571462 ( 2) GAGGTTTA 1 chr8:27949239-27949319 ( 29) GAGGTTTA 1 chr15:41943158-41943238 ( 9) GAGGTTTA 1 chr1:174952481-174952561 ( 20) GAGGTTTA 1 chr12:106289210-10628929 ( 6) GAGGTTTA 1 chr20:49812027-49812107 ( 23) GAGGTTTA 1 chr8:29208180-29208260 ( 40) GAGGTTTA 1 chr1:38813595-38813675 ( 17) GAGGTTTA 1 chr3:186400702-186400782 ( 45) GAGGTTTA 1 chr12:52405727-52405807 ( 34) GAGGTTTA 1 chr12:111298686-11129876 ( 31) GAGGTTTA 1 chr2:179090349-179090429 ( 10) GAGGTTTA 1 chr15:40164804-40164884 ( 6) GAGGTTTA 1 chr14:103154804-10315488 ( 30) GAGGTTTA 1 chr1:206859260-206859340 ( 52) GAGGTTTA 1 chr12:47672049-47672129 ( 42) AAGGTTTC 1 chr2:46451996-46452076 ( 27) AAGGTTTC 1 chr20:16452777-16452857 ( 3) AAGGTTTC 1 chr6:39948976-39949056 ( 55) AAGGTTTC 1 chr17:13288903-13288983 ( 34) AAGGTTTC 1 chr1:149973414-149973494 ( 10) AAGGTTTA 1 chr1:12805149-12805229 ( 1) AAGGTTTA 1 chr1:247609209-247609289 ( 69) AAGGTTTA 1 chr10:15224664-15224744 ( 53) AAGGTTTA 1 chr1:166166511-166166591 ( 4) AAGGTTTA 1 chr3:171931147-171931227 ( 48) GTGGTTTC 1 chr6:141188624-141188704 ( 20) GTGGTTTC 1 chr3:10227953-10228033 ( 38) GTGGTTTC 1 chr17:28872231-28872311 ( 33) GTGGTTTC 1 chr17:13981472-13981552 ( 5) GTGGTTTA 1 chr4:122875211-122875291 ( 40) GTGGTTTA 1 chr2:173111428-173111508 ( 23) GTGGTTTA 1 chr1:205127504-205127584 ( 72) GTGGTTTA 1 chr6:15377368-15377448 ( 66) GTGGTTTA 1 chr16:11188196-11188276 ( 73) GAGGTTTG 1 chr15:35967189-35967269 ( 3) AGGGTTTC 1 chr7:135883106-135883186 ( 40) AGGGTTTC 1 chr5:77973829-77973909 ( 16) AGGGTTTC 1 chr7:20251091-20251171 ( 15) GAGGTTGA 1 chr6:88881137-88881217 ( 6) AGGGTTTC 1 chr16:79791113-79791193 ( 12) GAGGTTGA 1 chr17:13498199-13498279 ( 18) GAGGTTTT 1 chr12:98927630-98927710 ( 28) AGGGTTTA 1 chr3:157170142-157170222 ( 40) AGGGTTTA 1 chr12:69865588-69865668 ( 30) AGGGTTTA 1 chr1:227523388-227523468 ( 13) AGGGTTTA 1 chr8:48590414-48590494 ( 48) AGGGTTTA 1 chr22:27041355-27041435 ( 12) GAGGTTCC 1 chr19:29026307-29026387 ( 4) GAGCTTTC 1 chr20:47404424-47404504 ( 3) GTGGTTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.16143 E= 1.6e-153 -76 -1356 181 -1356 167 -1356 -169 -168 -1356 -1356 205 -1356 -1356 -479 204 -1356 -1356 -1356 -1356 192 -1356 -1356 -1356 192 -1356 -479 -386 188 93 104 -386 -500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 121 E= 1.6e-153 0.157025 0.000000 0.842975 0.000000 0.842975 0.000000 0.074380 0.082645 0.000000 0.000000 1.000000 0.000000 0.000000 0.008264 0.991736 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.008264 0.016529 0.975207 0.504132 0.471074 0.016529 0.008264 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGTTTM MEME-1 regular expression -------------------------------------------------------------------------------- GAGGTTT[AC] -------------------------------------------------------------------------------- Time 4.95 secs. ******************************************************************************** ******************************************************************************** MOTIF KAAACCTC MEME-2 width = 8 sites = 98 llr = 946 E-value = 3.0e-137 ******************************************************************************** -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :aaa:::: pos.-specific C ::::aa:9 probability G 5::::::: matrix T 5:::::91 bits 2.1 ** 1.9 ** ** 1.7 ***** * 1.5 ******* Relative 1.3 ******* Entropy 1.1 ******** (13.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAAACCTC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:73119403-73119483 49 1.44e-05 TTGGCTGTTT GAAAcctc cattttacag chr4:99390127-99390207 66 1.44e-05 CTTTGCACAA GAAACCTC CAAGAGA chr8:41649788-41649868 45 1.44e-05 GCTGTGCTGA GAAACCTC GTCCGGCAGG chr17:40895826-40895906 60 1.44e-05 AGCTTTCACA GAAACCTC TAATAGGGTT chr5:175874921-175875001 61 1.44e-05 CGTCTCCCGA GAAACCTC CAAGAGTATC chr2:17830010-17830090 46 1.44e-05 GCTCTGTGAA GAAACCTC TTTATGTCTC chr19:10399357-10399437 36 1.44e-05 GGGTGTCACA GAAACCTC TCCTTCTGCT chr12:116720277-11672035 48 1.44e-05 GAGTTGATGA GAAACCTC AGGAGATAAG chr19:29026307-29026387 30 1.44e-05 catactccaa gaaacctc acccaacagc chr12:113660646-11366072 24 1.44e-05 GTAACATTAA GAAACCTC TTCTCTGTGA chr1:174846377-174846457 31 1.44e-05 GCATAGATAA GAAACCTC TTTTAGTTTC chr7:92624362-92624442 47 1.44e-05 TTATTCTGGA GAAACCTC TCCCAACTAG chr1:60144782-60144862 55 1.44e-05 TTGCTTAGCT GAAACCTC TACTTCTGTT chr1:68382171-68382251 33 1.44e-05 tctctcttca gaaacctc actctgcctg chr7:144559818-144559898 37 1.44e-05 atgtcaaaaa gaaacctc atacccttta chr1:205127504-205127584 49 1.44e-05 ACAGACAAAA GAAACCTC TCTAATTCCC chr14:96012223-96012303 29 1.44e-05 ATCAATGTAA GAAACCTC TCTAGAATAT chr1:18756377-18756457 60 1.44e-05 ctaacatcaa gaaacctc aactgactgc chr5:134318134-134318214 31 1.44e-05 tcacatacaa gaaacctc aataagatta chr1:33703371-33703451 62 1.44e-05 TGAGGACAGG GAAACCTC GAAGGCTGTG chr7:104771164-104771244 22 1.44e-05 AGGAACAAAA GAAACCTC TAAAGCCATG chr18:72675961-72676041 55 1.44e-05 GTCAGTGCCT GAAACCTC TATTGACCGC chr18:29282541-29282621 44 1.44e-05 GGGGTGCGGA GAAACCTC TAGAGATAGG chr22:27041355-27041435 41 1.44e-05 CCTGTCCTAG GAAACCTC CTACTGAGAC chr20:23206173-23206253 26 1.44e-05 AATGGGCTAA GAAACCTC AGAGTTCTCC chr22:40659302-40659382 27 1.44e-05 AGGATGGAAA GAAACCTC GTGGTGACAC chr12:101801009-10180108 32 1.44e-05 CTTTCACCAA GAAACCTC GGCGAACCTG chr9:5627330-5627410 32 1.44e-05 GGCAAGTTAA GAAACCTC TCTGGGCCTC chr17:20883175-20883255 16 1.44e-05 CCCTGCTGTA GAAACCTC TGCCATTCCC chr2:209260150-209260230 62 1.44e-05 gtggtagcaa gaaacctc accacagagg chr17:58663766-58663846 30 1.44e-05 CTGGGATCAA GAAACCTC TTTTCACTGC chr22:41972997-41973077 48 1.44e-05 GGTGCAGAAA GAAACCTC TTCTGTACCG chr21:30471987-30472067 57 1.44e-05 GAGCAGGTTA GAAACCTC TTCTTCCTTT chr1:8310024-8310104 29 1.44e-05 ctctcccaaa gaaacctc agctctctta chr20:47404424-47404504 32 1.44e-05 CTGTTTTTAA GAAACCTC AAAATTAGGG chr6:27192710-27192790 49 1.44e-05 GTGGTTGGGA GAAACCTC CACTGTCAGG chr2:65578023-65578103 33 1.44e-05 aggagctgaa gaaacctc tttttaagct chr4:173027197-173027277 39 1.44e-05 ATGTGACTAA GAAACCTC TACATGTTCC chrX:151047207-151047287 54 1.44e-05 agcaacagca gaaacctc tgataaaccc chr5:73927642-73927722 43 1.44e-05 AATAGTCAAA GAAACCTC ATTTTCCTAC chr8:100782619-100782699 43 3.02e-05 AAAGCCTAAG TAAACCTC Ttatcagtca chr2:3252663-3252743 70 3.02e-05 gtgagccaaa taaacctc ttt chr19:45083076-45083156 48 3.02e-05 atgagcctaa taaacctc ttttctttgt chrX:40163243-40163323 38 3.02e-05 gtgagtcaat taaacctc tcttcttcat chr21:47020372-47020452 37 3.02e-05 gtgtgccaaa taaacctc ttttctttat chr15:68695895-68695975 48 3.02e-05 tgagccaaaa taaacctc ttttctttCT chr8:105606320-105606400 58 3.02e-05 gtgagtcaat taaacctc ttttctttat chr3:31514554-31514634 62 3.02e-05 tcgagtccat taaacctc tttttcttcg chr21:36568581-36568661 60 3.02e-05 gtaaaacaaa taaacctc ttttccttat chr2:153097246-153097326 65 3.02e-05 gtgagccaaa taaacctc tattgttt chr1:16669466-16669546 65 3.02e-05 atgagctaaa taaacctc ttttcttt chr6:119782511-119782591 70 3.02e-05 atgagccaaa taaacctc ttt chr8:124263477-124263557 73 3.02e-05 gtgagtcaac taaacctc chr8:33209150-33209230 38 3.02e-05 gtgagccaaa taaacctc ttacccagcc chr1:41040720-41040800 68 3.02e-05 ctgagccaat taaacctc ttttc chr1:21736645-21736725 51 3.02e-05 gaaagtccat taaacctc tttcttttgt chr8:8255537-8255617 63 3.02e-05 GCAGAGCAAA TAAACCTC CCCTTTAGGG chr1:24174135-24174215 62 3.02e-05 gtgagctaaa taaacctc tattctttaa chr15:64316999-64317079 26 3.02e-05 GGGTGCTAAA TAAACCTC ACCCCAATGA chr22:22805004-22805084 20 3.02e-05 AACCGAGACA TAAACCTC TCTAGGCCCT chr20:37427081-37427161 67 3.02e-05 gtgagctaaa taaacctc ttttct chr10:99223469-99223549 34 3.02e-05 GGATTGAAAA TAAACCTC TGATGGTACA chr19:46585648-46585728 61 3.02e-05 CAGTGCATAC TAAACCTC TGAACTTGCT chr9:114810117-114810197 62 3.02e-05 atgagctaaa taaacctc ttttcttaat chr1:247089466-247089546 56 3.02e-05 tgaggcaaaa taaacctc ttttcttcat chr6:143580277-143580357 67 3.02e-05 gtgagccaaa taaacctc ttttct chr1:53887010-53887090 56 3.02e-05 gtgagccaaa taaacctc tactgtttat chr11:69333320-69333400 58 3.02e-05 tgagccaaaa taaacctc ttttctttat chr5:78436560-78436640 58 3.02e-05 acgagccaaa taaacctc ttttatttat chr8:59562381-59562461 42 3.02e-05 gtgagcccat taaacctc tcttGAATTA chr6:6830506-6830586 18 3.02e-05 ttgccttgaa taaacctc tacttgaaat chr7:47716870-47716950 52 3.02e-05 gtgagctaaa taaacctc ttttctttat chr10:127383611-12738369 41 3.02e-05 TGAGTAATAA TAAACCTC CAAGTTCCAG chr4:37658467-37658547 56 3.02e-05 gtgagcaaaa taaacctc tattctttat chr2:100250284-100250364 67 3.02e-05 gtgagccaaa taaacctc ttttct chr22:29959894-29959974 64 3.02e-05 tgtgacagga taaacctc tgttatttt chr2:136657269-136657349 47 3.02e-05 cttggcaaaa taaacctc taatcagctg chr7:130776006-130776086 30 3.02e-05 cttggcaaaa taaacctc taaactgatt chr5:154358066-154358146 65 3.02e-05 taagtccaat taaacctc tttttttc chr15:89622668-89622748 71 3.02e-05 CAtggcaaaa taaacctc ta chr10:30883106-30883186 36 3.02e-05 cttggcaaaa taaacctc taaatcagtt chr12:47638840-47638920 65 4.67e-05 acctactgaa gaaacctt tatcttcc chr10:44094816-44094896 57 4.67e-05 gaggcctcaa gaaacctt caatcatggc chr8:38039445-38039525 18 4.67e-05 TTAGAGTTGA GAAACCTT TTGAGCTAAA chr8:132828816-132828896 65 4.67e-05 GGAGTTGCAA GAAACCTT AGAGCATT chr16:11188196-11188276 32 6.48e-05 GTGATTGCAG TAAACCTT CTGGAAGCCA chr4:103541959-103542039 71 6.48e-05 GGGCCTGAAA TAAACCTT CC chr5:65178320-65178400 56 6.48e-05 cactccctaa taaacctt ctgtatgcta chr19:46174184-46174264 37 6.48e-05 TGCACAGAAA TAAACCTT GAAGGGGGCG chr1:33862248-33862328 46 8.99e-05 CACAGCCAAG GAACCCTC TGGTATGGGG chr7:73548741-73548821 41 8.99e-05 aaagaaggaa gaaccctc agttctggga chr3:43295711-43295791 18 8.99e-05 TCCTCTGCAA GAAACCCC TGGCTTGCCA chr21:35964640-35964720 60 1.17e-04 AAAGCTTCGA TAAACCCC AAGGATCAGG chr12:116796872-11679695 45 1.32e-04 TGAACATAAA GAAACCAC CACAATACAA chr3:171931147-171931227 39 1.48e-04 AGACAAGTCA TAAACCAC AGTGGTTTCT chr15:70717285-70717365 71 1.74e-04 tgtttgtggt gaagcctc ag chr1:168308001-168308081 53 1.74e-04 agcaaaagca gaaaccgc tgataagccc chr12:47672049-47672129 57 2.16e-04 TTCTTCACCA GAGACCTC TAGGAATGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:73119403-73119483 1.4e-05 48_[+2]_24 chr4:99390127-99390207 1.4e-05 65_[+2]_7 chr8:41649788-41649868 1.4e-05 44_[+2]_28 chr17:40895826-40895906 1.4e-05 59_[+2]_13 chr5:175874921-175875001 1.4e-05 60_[+2]_12 chr2:17830010-17830090 1.4e-05 45_[+2]_27 chr19:10399357-10399437 1.4e-05 35_[+2]_37 chr12:116720277-11672035 1.4e-05 47_[+2]_25 chr19:29026307-29026387 1.4e-05 29_[+2]_43 chr12:113660646-11366072 1.4e-05 23_[+2]_49 chr1:174846377-174846457 1.4e-05 30_[+2]_42 chr7:92624362-92624442 1.4e-05 46_[+2]_26 chr1:60144782-60144862 1.4e-05 54_[+2]_18 chr1:68382171-68382251 1.4e-05 32_[+2]_40 chr7:144559818-144559898 1.4e-05 36_[+2]_36 chr1:205127504-205127584 1.4e-05 48_[+2]_24 chr14:96012223-96012303 1.4e-05 28_[+2]_44 chr1:18756377-18756457 1.4e-05 59_[+2]_13 chr5:134318134-134318214 1.4e-05 30_[+2]_42 chr1:33703371-33703451 1.4e-05 61_[+2]_11 chr7:104771164-104771244 1.4e-05 21_[+2]_51 chr18:72675961-72676041 1.4e-05 54_[+2]_18 chr18:29282541-29282621 1.4e-05 43_[+2]_29 chr22:27041355-27041435 1.4e-05 40_[+2]_32 chr20:23206173-23206253 1.4e-05 25_[+2]_47 chr22:40659302-40659382 1.4e-05 26_[+2]_46 chr12:101801009-10180108 1.4e-05 31_[+2]_41 chr9:5627330-5627410 1.4e-05 31_[+2]_41 chr17:20883175-20883255 1.4e-05 15_[+2]_57 chr2:209260150-209260230 1.4e-05 61_[+2]_11 chr17:58663766-58663846 1.4e-05 29_[+2]_43 chr22:41972997-41973077 1.4e-05 47_[+2]_25 chr21:30471987-30472067 1.4e-05 56_[+2]_16 chr1:8310024-8310104 1.4e-05 28_[+2]_44 chr20:47404424-47404504 1.4e-05 31_[+2]_41 chr6:27192710-27192790 1.4e-05 48_[+2]_24 chr2:65578023-65578103 1.4e-05 32_[+2]_40 chr4:173027197-173027277 1.4e-05 38_[+2]_34 chrX:151047207-151047287 1.4e-05 53_[+2]_19 chr5:73927642-73927722 1.4e-05 42_[+2]_30 chr8:100782619-100782699 3e-05 42_[+2]_30 chr2:3252663-3252743 3e-05 69_[+2]_3 chr19:45083076-45083156 3e-05 47_[+2]_25 chrX:40163243-40163323 3e-05 37_[+2]_35 chr21:47020372-47020452 3e-05 36_[+2]_36 chr15:68695895-68695975 3e-05 47_[+2]_25 chr8:105606320-105606400 3e-05 57_[+2]_15 chr3:31514554-31514634 3e-05 61_[+2]_11 chr21:36568581-36568661 3e-05 59_[+2]_13 chr2:153097246-153097326 3e-05 64_[+2]_8 chr1:16669466-16669546 3e-05 64_[+2]_8 chr6:119782511-119782591 3e-05 69_[+2]_3 chr8:124263477-124263557 3e-05 72_[+2] chr8:33209150-33209230 3e-05 37_[+2]_35 chr1:41040720-41040800 3e-05 67_[+2]_5 chr1:21736645-21736725 3e-05 50_[+2]_22 chr8:8255537-8255617 3e-05 62_[+2]_10 chr1:24174135-24174215 3e-05 61_[+2]_11 chr15:64316999-64317079 3e-05 25_[+2]_47 chr22:22805004-22805084 3e-05 19_[+2]_53 chr20:37427081-37427161 3e-05 66_[+2]_6 chr10:99223469-99223549 3e-05 33_[+2]_39 chr19:46585648-46585728 3e-05 60_[+2]_12 chr9:114810117-114810197 3e-05 61_[+2]_11 chr1:247089466-247089546 3e-05 55_[+2]_17 chr6:143580277-143580357 3e-05 66_[+2]_6 chr1:53887010-53887090 3e-05 55_[+2]_17 chr11:69333320-69333400 3e-05 57_[+2]_15 chr5:78436560-78436640 3e-05 57_[+2]_15 chr8:59562381-59562461 3e-05 41_[+2]_31 chr6:6830506-6830586 3e-05 17_[+2]_55 chr7:47716870-47716950 3e-05 51_[+2]_21 chr10:127383611-12738369 3e-05 40_[+2]_32 chr4:37658467-37658547 3e-05 55_[+2]_17 chr2:100250284-100250364 3e-05 66_[+2]_6 chr22:29959894-29959974 3e-05 63_[+2]_9 chr2:136657269-136657349 3e-05 46_[+2]_26 chr7:130776006-130776086 3e-05 29_[+2]_43 chr5:154358066-154358146 3e-05 64_[+2]_8 chr15:89622668-89622748 3e-05 70_[+2]_2 chr10:30883106-30883186 3e-05 35_[+2]_37 chr12:47638840-47638920 4.7e-05 64_[+2]_8 chr10:44094816-44094896 4.7e-05 56_[+2]_16 chr8:38039445-38039525 4.7e-05 17_[+2]_55 chr8:132828816-132828896 4.7e-05 64_[+2]_8 chr16:11188196-11188276 6.5e-05 31_[+2]_41 chr4:103541959-103542039 6.5e-05 70_[+2]_2 chr5:65178320-65178400 6.5e-05 55_[+2]_17 chr19:46174184-46174264 6.5e-05 36_[+2]_36 chr1:33862248-33862328 9e-05 45_[+2]_27 chr7:73548741-73548821 9e-05 40_[+2]_32 chr3:43295711-43295791 9e-05 17_[+2]_55 chr21:35964640-35964720 0.00012 59_[+2]_13 chr12:116796872-11679695 0.00013 44_[+2]_28 chr3:171931147-171931227 0.00015 38_[+2]_34 chr15:70717285-70717365 0.00017 70_[+2]_2 chr1:168308001-168308081 0.00017 52_[+2]_20 chr12:47672049-47672129 0.00022 56_[+2]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KAAACCTC width=8 seqs=98 chr10:73119403-73119483 ( 49) GAAACCTC 1 chr4:99390127-99390207 ( 66) GAAACCTC 1 chr8:41649788-41649868 ( 45) GAAACCTC 1 chr17:40895826-40895906 ( 60) GAAACCTC 1 chr5:175874921-175875001 ( 61) GAAACCTC 1 chr2:17830010-17830090 ( 46) GAAACCTC 1 chr19:10399357-10399437 ( 36) GAAACCTC 1 chr12:116720277-11672035 ( 48) GAAACCTC 1 chr19:29026307-29026387 ( 30) GAAACCTC 1 chr12:113660646-11366072 ( 24) GAAACCTC 1 chr1:174846377-174846457 ( 31) GAAACCTC 1 chr7:92624362-92624442 ( 47) GAAACCTC 1 chr1:60144782-60144862 ( 55) GAAACCTC 1 chr1:68382171-68382251 ( 33) GAAACCTC 1 chr7:144559818-144559898 ( 37) GAAACCTC 1 chr1:205127504-205127584 ( 49) GAAACCTC 1 chr14:96012223-96012303 ( 29) GAAACCTC 1 chr1:18756377-18756457 ( 60) GAAACCTC 1 chr5:134318134-134318214 ( 31) GAAACCTC 1 chr1:33703371-33703451 ( 62) GAAACCTC 1 chr7:104771164-104771244 ( 22) GAAACCTC 1 chr18:72675961-72676041 ( 55) GAAACCTC 1 chr18:29282541-29282621 ( 44) GAAACCTC 1 chr22:27041355-27041435 ( 41) GAAACCTC 1 chr20:23206173-23206253 ( 26) GAAACCTC 1 chr22:40659302-40659382 ( 27) GAAACCTC 1 chr12:101801009-10180108 ( 32) GAAACCTC 1 chr9:5627330-5627410 ( 32) GAAACCTC 1 chr17:20883175-20883255 ( 16) GAAACCTC 1 chr2:209260150-209260230 ( 62) GAAACCTC 1 chr17:58663766-58663846 ( 30) GAAACCTC 1 chr22:41972997-41973077 ( 48) GAAACCTC 1 chr21:30471987-30472067 ( 57) GAAACCTC 1 chr1:8310024-8310104 ( 29) GAAACCTC 1 chr20:47404424-47404504 ( 32) GAAACCTC 1 chr6:27192710-27192790 ( 49) GAAACCTC 1 chr2:65578023-65578103 ( 33) GAAACCTC 1 chr4:173027197-173027277 ( 39) GAAACCTC 1 chrX:151047207-151047287 ( 54) GAAACCTC 1 chr5:73927642-73927722 ( 43) GAAACCTC 1 chr8:100782619-100782699 ( 43) TAAACCTC 1 chr2:3252663-3252743 ( 70) TAAACCTC 1 chr19:45083076-45083156 ( 48) TAAACCTC 1 chrX:40163243-40163323 ( 38) TAAACCTC 1 chr21:47020372-47020452 ( 37) TAAACCTC 1 chr15:68695895-68695975 ( 48) TAAACCTC 1 chr8:105606320-105606400 ( 58) TAAACCTC 1 chr3:31514554-31514634 ( 62) TAAACCTC 1 chr21:36568581-36568661 ( 60) TAAACCTC 1 chr2:153097246-153097326 ( 65) TAAACCTC 1 chr1:16669466-16669546 ( 65) TAAACCTC 1 chr6:119782511-119782591 ( 70) TAAACCTC 1 chr8:124263477-124263557 ( 73) TAAACCTC 1 chr8:33209150-33209230 ( 38) TAAACCTC 1 chr1:41040720-41040800 ( 68) TAAACCTC 1 chr1:21736645-21736725 ( 51) TAAACCTC 1 chr8:8255537-8255617 ( 63) TAAACCTC 1 chr1:24174135-24174215 ( 62) TAAACCTC 1 chr15:64316999-64317079 ( 26) TAAACCTC 1 chr22:22805004-22805084 ( 20) TAAACCTC 1 chr20:37427081-37427161 ( 67) TAAACCTC 1 chr10:99223469-99223549 ( 34) TAAACCTC 1 chr19:46585648-46585728 ( 61) TAAACCTC 1 chr9:114810117-114810197 ( 62) TAAACCTC 1 chr1:247089466-247089546 ( 56) TAAACCTC 1 chr6:143580277-143580357 ( 67) TAAACCTC 1 chr1:53887010-53887090 ( 56) TAAACCTC 1 chr11:69333320-69333400 ( 58) TAAACCTC 1 chr5:78436560-78436640 ( 58) TAAACCTC 1 chr8:59562381-59562461 ( 42) TAAACCTC 1 chr6:6830506-6830586 ( 18) TAAACCTC 1 chr7:47716870-47716950 ( 52) TAAACCTC 1 chr10:127383611-12738369 ( 41) TAAACCTC 1 chr4:37658467-37658547 ( 56) TAAACCTC 1 chr2:100250284-100250364 ( 67) TAAACCTC 1 chr22:29959894-29959974 ( 64) TAAACCTC 1 chr2:136657269-136657349 ( 47) TAAACCTC 1 chr7:130776006-130776086 ( 30) TAAACCTC 1 chr5:154358066-154358146 ( 65) TAAACCTC 1 chr15:89622668-89622748 ( 71) TAAACCTC 1 chr10:30883106-30883186 ( 36) TAAACCTC 1 chr12:47638840-47638920 ( 65) GAAACCTT 1 chr10:44094816-44094896 ( 57) GAAACCTT 1 chr8:38039445-38039525 ( 18) GAAACCTT 1 chr8:132828816-132828896 ( 65) GAAACCTT 1 chr16:11188196-11188276 ( 32) TAAACCTT 1 chr4:103541959-103542039 ( 71) TAAACCTT 1 chr5:65178320-65178400 ( 56) TAAACCTT 1 chr19:46174184-46174264 ( 37) TAAACCTT 1 chr1:33862248-33862328 ( 46) GAACCCTC 1 chr7:73548741-73548821 ( 41) GAACCCTC 1 chr3:43295711-43295791 ( 18) GAAACCCC 1 chr21:35964640-35964720 ( 60) TAAACCCC 1 chr12:116796872-11679695 ( 45) GAAACCAC 1 chr3:171931147-171931227 ( 39) TAAACCAC 1 chr15:70717285-70717365 ( 71) GAAGCCTC 1 chr1:168308001-168308081 ( 53) GAAACCGC 1 chr12:47672049-47672129 ( 57) GAGACCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.65378 E= 3.0e-137 -1326 -1326 111 86 191 -1326 -1326 -1326 190 -1326 -456 -1326 187 -349 -456 -1326 -1326 212 -1326 -1326 -1326 212 -1326 -1326 -370 -349 -456 184 -1326 200 -1326 -170 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 98 E= 3.0e-137 0.000000 0.000000 0.520408 0.479592 1.000000 0.000000 0.000000 0.000000 0.989796 0.000000 0.010204 0.000000 0.969388 0.020408 0.010204 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.020408 0.020408 0.010204 0.948980 0.000000 0.918367 0.000000 0.081633 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAAACCTC MEME-2 regular expression -------------------------------------------------------------------------------- [GT]AAACCTC -------------------------------------------------------------------------------- Time 8.52 secs. ******************************************************************************** ******************************************************************************** MOTIF YCTGCAGR MEME-3 width = 8 sites = 42 llr = 376 E-value = 8.1e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::a:6 pos.-specific C 5a:2a::: probability G :::7::a4 matrix T 5:a::::: bits 2.1 * * * 1.9 ** * * 1.7 ** *** 1.5 ** *** Relative 1.3 ** *** Entropy 1.1 ******* (12.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTGCAGA consensus C C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:45083076-45083156 27 2.81e-05 gcttgtacag tctgcaga accatgagcc chr1:12805149-12805229 15 2.81e-05 TTTATTCTAA CCTGCAGA ACATCTTTCA chrX:40163243-40163323 17 2.81e-05 tcctgttaag cctgcaga actgtgagtc chr21:47020372-47020452 16 2.81e-05 tcttgtacag cctgcaga actgtgtgcc chr15:68695895-68695975 26 2.81e-05 ttctgtacag tctgcaga actgtgagcc chr21:36568581-36568661 39 2.81e-05 tcttgtacag cctgcaga actgtaaaac chr6:119782511-119782591 49 2.81e-05 gacttcccag cctgcaga atcatgagcc chr3:176999202-176999282 14 2.81e-05 ggctcacagt tctgcaga ctatataaga chr20:37427081-37427161 46 2.81e-05 aacttctcag cctgcaga accgtgagct chr22:40659302-40659382 51 2.81e-05 ACACAGACTT CCTGCAGA GATAAGCCCT chr1:247089466-247089546 34 2.81e-05 gcctgcacag cctgcaga accatgaggc chr8:59562381-59562461 21 2.81e-05 tcctgtacag cctgcaga actgtgagcc chr7:47716870-47716950 31 2.81e-05 aacttctcag cctgcaga actgtgagct chr2:100250284-100250364 46 2.81e-05 tcctgtacag cctgcaga actgtgagcc chr7:105461390-105461470 55 2.81e-05 tcctgtacag cctgcaga actgtaagcc chr16:12510404-12510484 67 5.37e-05 ggctcccagt tctgcagg ctgtac chr15:70717285-70717365 26 5.37e-05 ggctcatggt tctgcagg ctgtccaaga chr5:72114902-72114982 26 5.37e-05 agctcacggt tctgcagg ctgggaagta chr3:57926995-57927075 28 5.37e-05 agctcacagt tctgcagg ctgggaagtc chr16:11428841-11428921 23 5.37e-05 ggctcacagt tctgcagg ctgtacaagc chr5:177619918-177619998 35 5.37e-05 agctcacggt tctgcagg ctgggaagtt chr5:179758313-179758393 8 5.37e-05 AACGAGA TCTGCAGG GCCTGGCTCA chr12:98825012-98825092 38 5.37e-05 tgctcatggt tctgcagg ctggacagtt chr10:44094816-44094896 17 5.37e-05 gctcaagggt tctgcagg ctgtacagga chr2:16853113-16853193 31 5.37e-05 ggctcacagt tctgcagg ctgtacagga chr8:117904119-117904199 39 5.37e-05 ggctcatggt tctgcagg ttgtacaaga chr1:15571382-15571462 23 5.37e-05 ggctcacagt tctgcagg ttgtacaaga chr20:49812027-49812107 44 5.37e-05 ggctcactgt tctgcagg ctgtacagga chr12:111298686-11129876 52 5.37e-05 ggcttacagt tctgcagg ctatacagga chr15:40164804-40164884 27 5.37e-05 ggctcacagt tctgcagg ctgtacagga chr1:247609209-247609289 10 8.06e-05 gtgctgtgg cctccaga ttatatgtcc chr6:39189700-39189780 12 8.06e-05 GCTGCACTGA TCTCCAGA GGGTTAAAGA chr1:41040720-41040800 22 8.06e-05 tttcctgagg cctccaga gtcatgcttc chr1:24174135-24174215 41 8.06e-05 aacttcccag cctccaga actgtgagct chr1:53887010-53887090 35 8.06e-05 gactccccag cctccaga actgtgagcc chr4:37658467-37658547 35 8.06e-05 gacttcccat cctccaga actgtgagca chr22:29959894-29959974 44 8.06e-05 tgacttccag cctccaga actgtgacag chr11:33907311-33907391 40 1.05e-04 TGGTGGGCAG CCTCCAGG ATGCAGTGGT chr9:114810117-114810197 41 1.36e-04 aacttcccag cctacaga ctcatgagct chr7:139896878-139896958 50 1.89e-04 ggctcacggt tctacagg ctgtgcaaga chr17:58663766-58663846 69 2.17e-04 AGTTGTGCCC TCTGCTGA CACT chr3:10227953-10228033 13 2.65e-04 agtcaaataa tctccagc ttttatcaga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:45083076-45083156 2.8e-05 26_[+3]_46 chr1:12805149-12805229 2.8e-05 14_[+3]_58 chrX:40163243-40163323 2.8e-05 16_[+3]_56 chr21:47020372-47020452 2.8e-05 15_[+3]_57 chr15:68695895-68695975 2.8e-05 25_[+3]_47 chr21:36568581-36568661 2.8e-05 38_[+3]_34 chr6:119782511-119782591 2.8e-05 48_[+3]_24 chr3:176999202-176999282 2.8e-05 13_[+3]_59 chr20:37427081-37427161 2.8e-05 45_[+3]_27 chr22:40659302-40659382 2.8e-05 50_[+3]_22 chr1:247089466-247089546 2.8e-05 33_[+3]_39 chr8:59562381-59562461 2.8e-05 20_[+3]_52 chr7:47716870-47716950 2.8e-05 30_[+3]_42 chr2:100250284-100250364 2.8e-05 45_[+3]_27 chr7:105461390-105461470 2.8e-05 54_[+3]_18 chr16:12510404-12510484 5.4e-05 66_[+3]_6 chr15:70717285-70717365 5.4e-05 25_[+3]_47 chr5:72114902-72114982 5.4e-05 25_[+3]_47 chr3:57926995-57927075 5.4e-05 27_[+3]_45 chr16:11428841-11428921 5.4e-05 22_[+3]_50 chr5:177619918-177619998 5.4e-05 34_[+3]_38 chr5:179758313-179758393 5.4e-05 7_[+3]_65 chr12:98825012-98825092 5.4e-05 37_[+3]_35 chr10:44094816-44094896 5.4e-05 16_[+3]_56 chr2:16853113-16853193 5.4e-05 30_[+3]_42 chr8:117904119-117904199 5.4e-05 38_[+3]_34 chr1:15571382-15571462 5.4e-05 22_[+3]_50 chr20:49812027-49812107 5.4e-05 43_[+3]_29 chr12:111298686-11129876 5.4e-05 51_[+3]_21 chr15:40164804-40164884 5.4e-05 26_[+3]_46 chr1:247609209-247609289 8.1e-05 9_[+3]_63 chr6:39189700-39189780 8.1e-05 11_[+3]_61 chr1:41040720-41040800 8.1e-05 21_[+3]_51 chr1:24174135-24174215 8.1e-05 40_[+3]_32 chr1:53887010-53887090 8.1e-05 34_[+3]_38 chr4:37658467-37658547 8.1e-05 34_[+3]_38 chr22:29959894-29959974 8.1e-05 43_[+3]_29 chr11:33907311-33907391 0.00011 39_[+3]_33 chr9:114810117-114810197 0.00014 40_[+3]_32 chr7:139896878-139896958 0.00019 49_[+3]_23 chr17:58663766-58663846 0.00022 68_[+3]_4 chr3:10227953-10228033 0.00027 12_[+3]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YCTGCAGR width=8 seqs=42 chr19:45083076-45083156 ( 27) TCTGCAGA 1 chr1:12805149-12805229 ( 15) CCTGCAGA 1 chrX:40163243-40163323 ( 17) CCTGCAGA 1 chr21:47020372-47020452 ( 16) CCTGCAGA 1 chr15:68695895-68695975 ( 26) TCTGCAGA 1 chr21:36568581-36568661 ( 39) CCTGCAGA 1 chr6:119782511-119782591 ( 49) CCTGCAGA 1 chr3:176999202-176999282 ( 14) TCTGCAGA 1 chr20:37427081-37427161 ( 46) CCTGCAGA 1 chr22:40659302-40659382 ( 51) CCTGCAGA 1 chr1:247089466-247089546 ( 34) CCTGCAGA 1 chr8:59562381-59562461 ( 21) CCTGCAGA 1 chr7:47716870-47716950 ( 31) CCTGCAGA 1 chr2:100250284-100250364 ( 46) CCTGCAGA 1 chr7:105461390-105461470 ( 55) CCTGCAGA 1 chr16:12510404-12510484 ( 67) TCTGCAGG 1 chr15:70717285-70717365 ( 26) TCTGCAGG 1 chr5:72114902-72114982 ( 26) TCTGCAGG 1 chr3:57926995-57927075 ( 28) TCTGCAGG 1 chr16:11428841-11428921 ( 23) TCTGCAGG 1 chr5:177619918-177619998 ( 35) TCTGCAGG 1 chr5:179758313-179758393 ( 8) TCTGCAGG 1 chr12:98825012-98825092 ( 38) TCTGCAGG 1 chr10:44094816-44094896 ( 17) TCTGCAGG 1 chr2:16853113-16853193 ( 31) TCTGCAGG 1 chr8:117904119-117904199 ( 39) TCTGCAGG 1 chr1:15571382-15571462 ( 23) TCTGCAGG 1 chr20:49812027-49812107 ( 44) TCTGCAGG 1 chr12:111298686-11129876 ( 52) TCTGCAGG 1 chr15:40164804-40164884 ( 27) TCTGCAGG 1 chr1:247609209-247609289 ( 10) CCTCCAGA 1 chr6:39189700-39189780 ( 12) TCTCCAGA 1 chr1:41040720-41040800 ( 22) CCTCCAGA 1 chr1:24174135-24174215 ( 41) CCTCCAGA 1 chr1:53887010-53887090 ( 35) CCTCCAGA 1 chr4:37658467-37658547 ( 35) CCTCCAGA 1 chr22:29959894-29959974 ( 44) CCTCCAGA 1 chr11:33907311-33907391 ( 40) CCTCCAGG 1 chr9:114810117-114810197 ( 41) CCTACAGA 1 chr7:139896878-139896958 ( 50) TCTACAGG 1 chr17:58663766-58663846 ( 69) TCTGCTGA 1 chr3:10227953-10228033 ( 13) TCTCCAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.35501 E= 8.1e-020 -1204 105 -1204 99 -1204 212 -1204 -1204 -1204 -1204 -1204 192 -248 -10 162 -1204 -1204 212 -1204 -1204 188 -1204 -1204 -347 -1204 -1204 205 -1204 111 -327 75 -1204 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 42 E= 8.1e-020 0.000000 0.476190 0.000000 0.523810 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.047619 0.214286 0.738095 0.000000 0.000000 1.000000 0.000000 0.000000 0.976190 0.000000 0.000000 0.023810 0.000000 0.000000 1.000000 0.000000 0.571429 0.023810 0.404762 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCTGCAGR MEME-3 regular expression -------------------------------------------------------------------------------- [TC]CT[GC]CAG[AG] -------------------------------------------------------------------------------- Time 11.95 secs. ******************************************************************************** ******************************************************************************** MOTIF CTYMCWGT MEME-4 width = 8 sites = 37 llr = 329 E-value = 4.0e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::6:6:: pos.-specific C a:64a::: probability G :::::1a: matrix T :a4::3:a bits 2.1 * * * 1.9 ** * ** 1.7 ** * ** 1.5 ** * ** Relative 1.3 ** * ** Entropy 1.1 ***** ** (12.8 bits) 0.8 ***** ** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCACAGT consensus TC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:57926995-57927075 20 1.44e-05 gtttatttag ctcacagt tctgcaggct chr8:134588408-134588488 29 1.44e-05 gtttaatgga ctcacagt tcagcatggc chr1:237077898-237077978 58 1.44e-05 Tatctactgc ctcacagt tctggaggct chr2:173111428-173111508 36 1.44e-05 gtttatttgg ctcacagt tctgagggct chr18:1003650-1003730 71 1.44e-05 gtttatttgg ctcacagt tc chr16:11428841-11428921 15 1.44e-05 gtttatttgg ctcacagt tctgcaggct chr5:158730379-158730459 36 1.44e-05 gtttatttag ctcacagt tctgcggctg chr3:176999202-176999282 6 1.44e-05 tttgg ctcacagt tctgcagact chr7:108175757-108175837 20 1.44e-05 gtttaattga ctcacagt tccgcaggct chr2:16853113-16853193 23 1.44e-05 gtttaactgg ctcacagt tctgcaggct chr3:128058607-128058687 31 1.44e-05 gtttaatgga ctcacagt tctgcgtggc chr6:150569065-150569145 32 1.44e-05 gtttatttag ctcacagt tctggaggct chr1:15571382-15571462 15 1.44e-05 gtttatttgg ctcacagt tctgcaggtt chr15:41943158-41943238 22 1.44e-05 gtttatttgg ctcacagt tctggaggct chr15:40164804-40164884 19 1.44e-05 gtttaattgg ctcacagt tctgcaggct chr16:12510404-12510484 59 2.68e-05 gtttctttgg ctcccagt tctgcaggct chr8:124263477-124263557 28 2.68e-05 ttcttggggc ctcccagt catgcttctt chr20:49812027-49812107 36 5.76e-05 gtttatttgg ctcactgt tctgcaggct chr10:127383611-12738369 16 5.76e-05 AGAGGGAAGC CTTACAGT CAAACAATGA chr3:186400702-186400782 57 5.76e-05 ggtttattga cttacagt tccacgtggc chr12:111298686-11129876 44 5.76e-05 gtttaattgg cttacagt tctgcaggct chr4:122875211-122875291 62 8.43e-05 tggctatctt ctccctgt cttcacatgg chr12:106289210-10628929 19 8.43e-05 gtttattgga cttccagt tccacatggc chr12:47672049-47672129 73 1.15e-04 TCTAGGAATG CTTCCTGT chr2:3252663-3252743 37 1.15e-04 tgctgccatg cttcctgt acagcctgtg chrX:40163243-40163323 5 1.15e-04 catg cttcctgt taagcctgca chr18:1464643-1464723 28 1.15e-04 CATGACTGTT CTTCCTGT TTGGGACTCC chr14:31496072-31496152 40 1.15e-04 CCCTCTTTCC CTTCCTGT CACTCGCTCT chr8:105606320-105606400 25 1.15e-04 ccctgccgtg cttcctgt acagcctgtg chr1:41040720-41040800 36 1.15e-04 cagagtcatg cttcctgt acagcctgtg chr11:69333320-69333400 24 1.15e-04 tgctgccacg cttcctgt acagcctgaa chr2:100250284-100250364 34 1.15e-04 cagtgcccca cttcctgt acagcctgca chr7:105461390-105461470 43 1.15e-04 tggtgccatg cttcctgt acagcctgca chr5:72114902-72114982 18 1.28e-04 tattatttag ctcacggt tctgcaggct chr5:177619918-177619998 27 1.28e-04 gtttatttag ctcacggt tctgcaggct chr7:139896878-139896958 42 1.28e-04 gtttctttgg ctcacggt tctacaggct chr17:72426854-72426934 50 1.39e-04 AGAGTTTAGA CTCCCGGT TGTCGTAGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:57926995-57927075 1.4e-05 19_[+4]_53 chr8:134588408-134588488 1.4e-05 28_[+4]_44 chr1:237077898-237077978 1.4e-05 57_[+4]_15 chr2:173111428-173111508 1.4e-05 35_[+4]_37 chr18:1003650-1003730 1.4e-05 70_[+4]_2 chr16:11428841-11428921 1.4e-05 14_[+4]_58 chr5:158730379-158730459 1.4e-05 35_[+4]_37 chr3:176999202-176999282 1.4e-05 5_[+4]_67 chr7:108175757-108175837 1.4e-05 19_[+4]_53 chr2:16853113-16853193 1.4e-05 22_[+4]_50 chr3:128058607-128058687 1.4e-05 30_[+4]_42 chr6:150569065-150569145 1.4e-05 31_[+4]_41 chr1:15571382-15571462 1.4e-05 14_[+4]_58 chr15:41943158-41943238 1.4e-05 21_[+4]_51 chr15:40164804-40164884 1.4e-05 18_[+4]_54 chr16:12510404-12510484 2.7e-05 58_[+4]_14 chr8:124263477-124263557 2.7e-05 27_[+4]_45 chr20:49812027-49812107 5.8e-05 35_[+4]_37 chr10:127383611-12738369 5.8e-05 15_[+4]_57 chr3:186400702-186400782 5.8e-05 56_[+4]_16 chr12:111298686-11129876 5.8e-05 43_[+4]_29 chr4:122875211-122875291 8.4e-05 61_[+4]_11 chr12:106289210-10628929 8.4e-05 18_[+4]_54 chr12:47672049-47672129 0.00011 72_[+4] chr2:3252663-3252743 0.00011 36_[+4]_36 chrX:40163243-40163323 0.00011 4_[+4]_68 chr18:1464643-1464723 0.00011 27_[+4]_45 chr14:31496072-31496152 0.00011 39_[+4]_33 chr8:105606320-105606400 0.00011 24_[+4]_48 chr1:41040720-41040800 0.00011 35_[+4]_37 chr11:69333320-69333400 0.00011 23_[+4]_49 chr2:100250284-100250364 0.00011 33_[+4]_39 chr7:105461390-105461470 0.00011 42_[+4]_30 chr5:72114902-72114982 0.00013 17_[+4]_55 chr5:177619918-177619998 0.00013 26_[+4]_46 chr7:139896878-139896958 0.00013 41_[+4]_31 chr17:72426854-72426934 0.00014 49_[+4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTYMCWGT width=8 seqs=37 chr3:57926995-57927075 ( 20) CTCACAGT 1 chr8:134588408-134588488 ( 29) CTCACAGT 1 chr1:237077898-237077978 ( 58) CTCACAGT 1 chr2:173111428-173111508 ( 36) CTCACAGT 1 chr18:1003650-1003730 ( 71) CTCACAGT 1 chr16:11428841-11428921 ( 15) CTCACAGT 1 chr5:158730379-158730459 ( 36) CTCACAGT 1 chr3:176999202-176999282 ( 6) CTCACAGT 1 chr7:108175757-108175837 ( 20) CTCACAGT 1 chr2:16853113-16853193 ( 23) CTCACAGT 1 chr3:128058607-128058687 ( 31) CTCACAGT 1 chr6:150569065-150569145 ( 32) CTCACAGT 1 chr1:15571382-15571462 ( 15) CTCACAGT 1 chr15:41943158-41943238 ( 22) CTCACAGT 1 chr15:40164804-40164884 ( 19) CTCACAGT 1 chr16:12510404-12510484 ( 59) CTCCCAGT 1 chr8:124263477-124263557 ( 28) CTCCCAGT 1 chr20:49812027-49812107 ( 36) CTCACTGT 1 chr10:127383611-12738369 ( 16) CTTACAGT 1 chr3:186400702-186400782 ( 57) CTTACAGT 1 chr12:111298686-11129876 ( 44) CTTACAGT 1 chr4:122875211-122875291 ( 62) CTCCCTGT 1 chr12:106289210-10628929 ( 19) CTTCCAGT 1 chr12:47672049-47672129 ( 73) CTTCCTGT 1 chr2:3252663-3252743 ( 37) CTTCCTGT 1 chrX:40163243-40163323 ( 5) CTTCCTGT 1 chr18:1464643-1464723 ( 28) CTTCCTGT 1 chr14:31496072-31496152 ( 40) CTTCCTGT 1 chr8:105606320-105606400 ( 25) CTTCCTGT 1 chr1:41040720-41040800 ( 36) CTTCCTGT 1 chr11:69333320-69333400 ( 24) CTTCCTGT 1 chr2:100250284-100250364 ( 34) CTTCCTGT 1 chr7:105461390-105461470 ( 43) CTTCCTGT 1 chr5:72114902-72114982 ( 18) CTCACGGT 1 chr5:177619918-177619998 ( 27) CTCACGGT 1 chr7:139896878-139896958 ( 42) CTCACGGT 1 chr17:72426854-72426934 ( 50) CTCCCGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.1086 E= 4.0e-013 -1185 212 -1185 -1185 -1185 -1185 -1185 192 -1185 144 -1185 52 116 82 -1185 -1185 -1185 212 -1185 -1185 110 -1185 -115 29 -1185 -1185 205 -1185 -1185 -1185 -1185 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 37 E= 4.0e-013 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.621622 0.000000 0.378378 0.594595 0.405405 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.567568 0.000000 0.108108 0.324324 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMCWGT MEME-4 regular expression -------------------------------------------------------------------------------- CT[CT][AC]C[AT]GT -------------------------------------------------------------------------------- Time 15.31 secs. ******************************************************************************** ******************************************************************************** MOTIF ACTGTGAG MEME-5 width = 8 sites = 25 llr = 242 E-value = 1.4e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A a::::1a: pos.-specific C :91::1:: probability G :::a:8:a matrix T :19:a::: bits 2.1 * 1.9 * ** ** 1.7 ** ** ** 1.5 ***** ** Relative 1.3 ***** ** Entropy 1.1 ******** (14.0 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACTGTGAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:3252663-3252743 57 1.58e-05 agcctgtgga actgtgag ccaaataaac chrX:40163243-40163323 25 1.58e-05 agcctgcaga actgtgag tcaattaaac chr9:100937003-100937083 68 1.58e-05 gccatgtgga actgtgag tcaat chr15:68695895-68695975 34 1.58e-05 agtctgcaga actgtgag ccaaaataaa chr8:105606320-105606400 45 1.58e-05 agcctgtgga actgtgag tcaattaaac chr3:31514554-31514634 22 1.58e-05 ttccgccatg actgtgag gcctccccag chr2:153097246-153097326 52 1.58e-05 agcctctaga actgtgag ccaaataaac chr8:124263477-124263557 60 1.58e-05 agccggcaaa actgtgag tcaactaaac chr8:33209150-33209230 25 1.58e-05 agcctgaaga actgtgag ccaaataaac chr1:24174135-24174215 49 1.58e-05 agcctccaga actgtgag ctaaataaac chr1:53887010-53887090 43 1.58e-05 agcctccaga actgtgag ccaaataaac chr8:59562381-59562461 29 1.58e-05 agcctgcaga actgtgag cccattaaac chr7:47716870-47716950 39 1.58e-05 agcctgcaga actgtgag ctaaataaac chr4:37658467-37658547 43 1.58e-05 atcctccaga actgtgag caaaataaac chr2:100250284-100250364 54 1.58e-05 agcctgcaga actgtgag ccaaataaac chr17:38717270-38717350 63 3.08e-05 GCCCGCTCTG ACTGTCAG GGAGAAATGA chr17:20883175-20883255 60 3.08e-05 GATGGACTTG ACTGTCAG CTTAGCTTGG chr6:27192710-27192790 58 3.08e-05 AGAAACCTCC ACTGTCAG GAGACAGTAA chr20:37427081-37427161 54 4.45e-05 agcctgcaga accgtgag ctaaataaac chr11:69333320-69333400 44 4.45e-05 agcctgaaga accgtgag ccaaaataaa chr7:105461390-105461470 63 6.18e-05 agcctgcaga actgtaag ccaatgaaac chr5:154358066-154358146 51 6.18e-05 gccatgtaga actgtaag tccaattaaa chr1:21736645-21736725 11 7.99e-05 ttccaccatg attgtgag gcctccccag chr6:143580277-143580357 54 7.99e-05 agccaccaga attgtgag ccaaataaac chr10:99223469-99223549 10 9.50e-05 TGAAATCTC ACTCTGAG GACAAAGGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:3252663-3252743 1.6e-05 56_[+5]_16 chrX:40163243-40163323 1.6e-05 24_[+5]_48 chr9:100937003-100937083 1.6e-05 67_[+5]_5 chr15:68695895-68695975 1.6e-05 33_[+5]_39 chr8:105606320-105606400 1.6e-05 44_[+5]_28 chr3:31514554-31514634 1.6e-05 21_[+5]_51 chr2:153097246-153097326 1.6e-05 51_[+5]_21 chr8:124263477-124263557 1.6e-05 59_[+5]_13 chr8:33209150-33209230 1.6e-05 24_[+5]_48 chr1:24174135-24174215 1.6e-05 48_[+5]_24 chr1:53887010-53887090 1.6e-05 42_[+5]_30 chr8:59562381-59562461 1.6e-05 28_[+5]_44 chr7:47716870-47716950 1.6e-05 38_[+5]_34 chr4:37658467-37658547 1.6e-05 42_[+5]_30 chr2:100250284-100250364 1.6e-05 53_[+5]_19 chr17:38717270-38717350 3.1e-05 62_[+5]_10 chr17:20883175-20883255 3.1e-05 59_[+5]_13 chr6:27192710-27192790 3.1e-05 57_[+5]_15 chr20:37427081-37427161 4.5e-05 53_[+5]_19 chr11:69333320-69333400 4.5e-05 43_[+5]_29 chr7:105461390-105461470 6.2e-05 62_[+5]_10 chr5:154358066-154358146 6.2e-05 50_[+5]_22 chr1:21736645-21736725 8e-05 10_[+5]_62 chr6:143580277-143580357 8e-05 53_[+5]_19 chr10:99223469-99223549 9.5e-05 9_[+5]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTGTGAG width=8 seqs=25 chr2:3252663-3252743 ( 57) ACTGTGAG 1 chrX:40163243-40163323 ( 25) ACTGTGAG 1 chr9:100937003-100937083 ( 68) ACTGTGAG 1 chr15:68695895-68695975 ( 34) ACTGTGAG 1 chr8:105606320-105606400 ( 45) ACTGTGAG 1 chr3:31514554-31514634 ( 22) ACTGTGAG 1 chr2:153097246-153097326 ( 52) ACTGTGAG 1 chr8:124263477-124263557 ( 60) ACTGTGAG 1 chr8:33209150-33209230 ( 25) ACTGTGAG 1 chr1:24174135-24174215 ( 49) ACTGTGAG 1 chr1:53887010-53887090 ( 43) ACTGTGAG 1 chr8:59562381-59562461 ( 29) ACTGTGAG 1 chr7:47716870-47716950 ( 39) ACTGTGAG 1 chr4:37658467-37658547 ( 43) ACTGTGAG 1 chr2:100250284-100250364 ( 54) ACTGTGAG 1 chr17:38717270-38717350 ( 63) ACTGTCAG 1 chr17:20883175-20883255 ( 60) ACTGTCAG 1 chr6:27192710-27192790 ( 58) ACTGTCAG 1 chr20:37427081-37427161 ( 54) ACCGTGAG 1 chr11:69333320-69333400 ( 44) ACCGTGAG 1 chr7:105461390-105461470 ( 63) ACTGTAAG 1 chr5:154358066-154358146 ( 51) ACTGTAAG 1 chr1:21736645-21736725 ( 11) ATTGTGAG 1 chr6:143580277-143580357 ( 54) ATTGTGAG 1 chr10:99223469-99223549 ( 10) ACTCTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.0004 E= 1.4e-010 191 -1129 -1129 -1129 -1129 200 -1129 -172 -1129 -152 -1129 180 -1129 -252 200 -1129 -1129 -1129 -1129 192 -173 -94 173 -1129 191 -1129 -1129 -1129 -1129 -1129 205 -1129 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 25 E= 1.4e-010 1.000000 0.000000 0.000000 0.000000 0.000000 0.920000 0.000000 0.080000 0.000000 0.080000 0.000000 0.920000 0.000000 0.040000 0.960000 0.000000 0.000000 0.000000 0.000000 1.000000 0.080000 0.120000 0.800000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGTGAG MEME-5 regular expression -------------------------------------------------------------------------------- ACTGTGAG -------------------------------------------------------------------------------- Time 18.56 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:30883106-30883186 2.91e-02 35_[+2(3.02e-05)]_37 chr1:206859260-206859340 7.97e-02 51_[+1(3.38e-05)]_21 chr5:73927642-73927722 2.32e-02 42_[+2(1.44e-05)]_30 chrX:151047207-151047287 9.55e-02 53_[+2(1.44e-05)]_19 chr14:103154804-10315488 1.03e-01 29_[+1(3.38e-05)]_43 chr15:40164804-40164884 6.35e-06 5_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ [+3(5.37e-05)]_46 chr8:132828816-132828896 1.36e-01 64_[+2(4.67e-05)]_8 chr4:173027197-173027277 5.15e-02 38_[+2(1.44e-05)]_34 chr15:89622668-89622748 1.24e-01 30_[+2(3.02e-05)]_12_[+2(3.02e-05)]_\ 12_[+2(3.02e-05)]_2 chr2:65578023-65578103 3.50e-03 32_[+2(1.44e-05)]_40 chr2:179090349-179090429 7.37e-04 9_[+1(3.38e-05)]_63 chr12:111298686-11129876 1.09e-04 30_[+1(3.38e-05)]_5_[+4(5.76e-05)]_\ [+3(5.37e-05)]_21 chr5:154358066-154358146 6.00e-04 50_[+5(6.18e-05)]_6_[+2(3.02e-05)]_\ 8 chr7:130776006-130776086 1.16e-02 29_[+2(3.02e-05)]_43 chr6:27192710-27192790 2.73e-04 48_[+2(1.44e-05)]_1_[+5(3.08e-05)]_\ 15 chr2:136657269-136657349 3.22e-02 46_[+2(3.02e-05)]_26 chr12:52405727-52405807 2.32e-02 33_[+1(3.38e-05)]_39 chr22:29959894-29959974 2.44e-04 43_[+3(8.06e-05)]_12_[+2(3.02e-05)]_\ 9 chr20:47404424-47404504 9.43e-03 31_[+2(1.44e-05)]_41 chr3:186400702-186400782 1.81e-03 44_[+1(3.38e-05)]_4_[+4(5.76e-05)]_\ 16 chr6:15377368-15377448 1.35e-01 80 chr14:24865606-24865686 8.66e-02 23_[+1(1.57e-05)]_49 chr7:105461390-105461470 5.12e-05 54_[+3(2.81e-05)]_[+5(6.18e-05)]_10 chr1:38813595-38813675 2.78e-03 16_[+1(3.38e-05)]_56 chr2:100250284-100250364 6.97e-07 45_[+3(2.81e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_6 chr4:37658467-37658547 3.27e-05 34_[+3(8.06e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_17 chr10:127383611-12738369 7.98e-04 15_[+4(5.76e-05)]_17_[+2(3.02e-05)]_\ 32 chr8:29208180-29208260 4.29e-02 39_[+1(3.38e-05)]_33 chr7:47716870-47716950 3.03e-05 30_[+3(2.81e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_21 chr1:53576335-53576415 1.21e-03 51_[+1(1.57e-05)]_21 chr2:99039073-99039153 3.02e-01 80 chr8:38039445-38039525 1.59e-01 17_[+2(4.67e-05)]_55 chr6:6830506-6830586 1.50e-02 17_[+2(3.02e-05)]_55 chr7:139896878-139896958 4.23e-04 28_[+1(1.57e-05)]_44 chr3:43295711-43295791 4.24e-02 17_[+2(8.99e-05)]_55 chr8:59562381-59562461 3.55e-06 20_[+3(2.81e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_31 chr21:36810999-36811079 3.89e-03 45_[+1(1.57e-05)]_27 chr20:49812027-49812107 1.09e-04 22_[+1(3.38e-05)]_5_[+4(5.76e-05)]_\ [+3(5.37e-05)]_29 chr5:78436560-78436640 3.91e-02 57_[+2(3.02e-05)]_15 chr11:69333320-69333400 2.59e-05 43_[+5(4.45e-05)]_6_[+2(3.02e-05)]_\ 15 chr1:8310024-8310104 4.34e-02 28_[+2(1.44e-05)]_44 chr1:53887010-53887090 5.20e-05 34_[+3(8.06e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_17 chr12:106289210-10628929 7.49e-04 5_[+1(3.38e-05)]_5_[+4(8.43e-05)]_\ 54 chr1:174952481-174952561 3.84e-02 19_[+1(3.38e-05)]_53 chr21:30471987-30472067 2.27e-02 56_[+2(1.44e-05)]_16 chr6:143580277-143580357 1.32e-03 53_[+5(7.99e-05)]_5_[+2(3.02e-05)]_\ 6 chr11:33907311-33907391 4.59e-02 80 chr8:8230169-8230249 1.74e-02 13_[+1(1.57e-05)]_59 chr22:41972997-41973077 4.78e-03 47_[+2(1.44e-05)]_25 chr17:58663766-58663846 2.67e-03 29_[+2(1.44e-05)]_43 chr17:13288903-13288983 6.04e-02 33_[+1(5.10e-05)]_39 chr2:209260150-209260230 1.34e-02 61_[+2(1.44e-05)]_11 chr15:41943158-41943238 3.85e-04 8_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 51 chr1:247089466-247089546 8.19e-04 33_[+3(2.81e-05)]_14_[+2(3.02e-05)]_\ 17 chr9:114810117-114810197 7.86e-03 61_[+2(3.02e-05)]_11 chr19:46585648-46585728 1.85e-02 60_[+2(3.02e-05)]_12 chr6:14328520-14328600 1.94e-02 18_[+1(3.38e-05)]_27_[+1(1.57e-05)]_\ 19 chr8:27949239-27949319 1.92e-02 28_[+1(3.38e-05)]_44 chr1:15571382-15571462 4.09e-05 1_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ [+3(5.37e-05)]_50 chr2:48515218-48515298 1.06e-02 34_[+1(3.38e-05)]_38 chr17:20883175-20883255 1.88e-04 15_[+2(1.44e-05)]_36_[+5(3.08e-05)]_\ 13 chr8:117904119-117904199 1.74e-03 17_[+1(3.38e-05)]_13_[+3(5.37e-05)]_\ 34 chr17:28872231-28872311 1.99e-02 80 chr16:79791113-79791193 1.69e-01 80 chr10:99223469-99223549 4.46e-04 9_[+5(9.50e-05)]_16_[+2(3.02e-05)]_\ 39 chr6:150569065-150569145 3.59e-04 18_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 41 chr9:5627330-5627410 1.89e-02 31_[+2(1.44e-05)]_41 chr3:128058607-128058687 5.88e-04 17_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 42 chr12:101801009-10180108 4.13e-02 31_[+2(1.44e-05)]_41 chr22:40659302-40659382 3.32e-04 26_[+2(1.44e-05)]_16_[+3(2.81e-05)]_\ 22 chr8:48590414-48590494 4.25e-01 80 chr1:168308001-168308081 7.87e-02 80 chr2:16853113-16853193 3.61e-05 9_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ [+3(5.37e-05)]_42 chr20:23206173-23206253 2.69e-03 25_[+2(1.44e-05)]_47 chr20:37427081-37427161 7.11e-05 45_[+3(2.81e-05)]_[+5(4.45e-05)]_5_\ [+2(3.02e-05)]_6 chr22:22805004-22805084 6.73e-02 19_[+2(3.02e-05)]_53 chr8:37927252-37927332 9.57e-02 13_[+1(3.38e-05)]_59 chr4:106394601-106394681 4.08e-03 15_[+1(1.57e-05)]_57 chr15:64316999-64317079 4.68e-02 25_[+2(3.02e-05)]_47 chr1:24174135-24174215 3.50e-05 40_[+3(8.06e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_11 chr7:73548741-73548821 4.98e-03 40_[+2(8.99e-05)]_32 chr8:8255537-8255617 5.62e-02 62_[+2(3.02e-05)]_10 chr19:46174184-46174264 5.95e-03 36_[+2(6.48e-05)]_36 chr8:134581252-134581332 1.77e-02 80 chr2:149901200-149901280 5.16e-03 48_[+1(1.57e-05)]_24 chr3:47161087-47161167 4.65e-03 80 chr11:33907112-33907192 1.58e-01 58_[+1(3.38e-05)]_14 chr22:27041355-27041435 8.35e-05 40_[+2(1.44e-05)]_32 chr3:10227953-10228033 2.06e-02 80 chr1:21736645-21736725 1.77e-03 10_[+5(7.99e-05)]_32_[+2(3.02e-05)]_\ 22 chr7:108175757-108175837 1.74e-05 6_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 53 chr13:28930300-28930380 1.20e-02 21_[+1(3.38e-05)]_51 chr7:95076091-95076171 4.90e-02 49_[+1(3.38e-05)]_23 chr12:57381438-57381518 7.90e-04 9_[+1(1.57e-05)]_63 chr10:44094816-44094896 2.00e-03 16_[+3(5.37e-05)]_32_[+2(4.67e-05)]_\ 16 chr16:85603556-85603636 1.70e-02 43_[+1(1.57e-05)]_29 chr12:98825012-98825092 1.76e-03 16_[+1(3.38e-05)]_13_[+3(5.37e-05)]_\ 35 chr1:166166511-166166591 3.22e-02 3_[+1(7.09e-05)]_69 chr18:29282541-29282621 7.81e-03 43_[+2(1.44e-05)]_29 chr4:14889768-14889848 4.20e-01 80 chr3:176999202-176999282 1.84e-03 5_[+4(1.44e-05)]_[+3(2.81e-05)]_59 chr18:72675961-72676041 2.15e-02 54_[+2(1.44e-05)]_18 chrX:41420441-41420521 1.67e-02 13_[+1(1.57e-05)]_59 chr1:227523388-227523468 2.97e-02 80 chr7:104771164-104771244 4.38e-02 21_[+2(1.44e-05)]_51 chr7:150132516-150132596 1.09e-03 43_[+1(1.57e-05)]_29 chr1:33703371-33703451 9.83e-05 20_[+1(1.57e-05)]_33_[+2(1.44e-05)]_\ 11 chr2:217313707-217313787 1.20e-02 17_[+1(3.38e-05)]_55 chr17:38717270-38717350 2.69e-05 5_[+1(1.57e-05)]_49_[+5(3.08e-05)]_\ 10 chr5:134318134-134318214 1.66e-02 30_[+2(1.44e-05)]_42 chr1:181070741-181070821 2.00e-04 26_[+1(1.57e-05)]_46 chr1:41040720-41040800 3.98e-05 21_[+3(8.06e-05)]_38_[+2(3.02e-05)]_\ 5 chr1:39243328-39243408 4.52e-02 80 chr6:39948976-39949056 1.34e-01 54_[+1(5.10e-05)]_18 chr5:79566479-79566559 1.27e-02 49_[+1(1.57e-05)]_23 chr1:18756377-18756457 4.23e-02 59_[+2(1.44e-05)]_13 chr8:33209150-33209230 8.34e-05 24_[+5(1.58e-05)]_5_[+2(3.02e-05)]_\ 35 chr14:96012223-96012303 5.30e-03 28_[+2(1.44e-05)]_44 chr5:179758313-179758393 1.78e-03 7_[+3(5.37e-05)]_19_[+1(1.57e-05)]_\ 38 chr21:40794534-40794614 8.34e-02 19_[+1(1.57e-05)]_53 chr15:60691221-60691301 4.23e-01 80 chr16:14222013-14222093 8.89e-02 35_[+1(3.38e-05)]_37 chr5:177619918-177619998 1.54e-04 13_[+1(3.38e-05)]_13_[+3(5.37e-05)]_\ 38 chr6:88881137-88881217 5.25e-02 80 chr10:81164204-81164284 1.33e-02 31_[+1(1.57e-05)]_41 chr17:19963211-19963291 1.61e-02 23_[+1(1.57e-05)]_49 chr5:65178320-65178400 4.20e-02 55_[+2(6.48e-05)]_17 chr1:205127504-205127584 2.32e-03 48_[+2(1.44e-05)]_24 chr7:144559818-144559898 1.43e-02 36_[+2(1.44e-05)]_36 chr1:71546289-71546369 3.72e-02 11_[+1(1.57e-05)]_61 chr8:125993894-125993974 5.56e-02 14_[+1(3.38e-05)]_58 chr3:195908841-195908921 2.45e-02 34_[+1(1.57e-05)]_38 chr5:158730379-158730459 6.07e-04 22_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 37 chr10:15224664-15224744 1.39e-01 52_[+1(7.09e-05)]_20 chr1:68382171-68382251 4.41e-04 32_[+2(1.44e-05)]_40 chr9:130285812-130285892 5.80e-02 80 chr8:124263477-124263557 1.30e-05 8_[+5(6.18e-05)]_11_[+4(2.68e-05)]_\ 24_[+5(1.58e-05)]_5_[+2(3.02e-05)] chr15:83639047-83639127 1.75e-02 32_[+1(1.57e-05)]_40 chr6:141188624-141188704 3.96e-03 80 chr1:60144782-60144862 2.42e-02 54_[+2(1.44e-05)]_18 chr6:119782511-119782591 1.06e-03 48_[+3(2.81e-05)]_13_[+2(3.02e-05)]_\ 3 chr1:161676963-161677043 4.56e-03 32_[+1(1.57e-05)]_40 chr7:20251091-20251171 3.73e-01 80 chr3:171931147-171931227 5.48e-03 80 chr1:16669466-16669546 4.74e-03 64_[+2(3.02e-05)]_8 chr7:92624362-92624442 4.64e-03 46_[+2(1.44e-05)]_26 chr12:116796872-11679695 1.67e-01 80 chr12:69865588-69865668 1.44e-01 80 chr7:116848476-116848556 1.26e-02 37_[+1(1.57e-05)]_25_[+1(5.10e-05)]_\ 2 chr1:174846377-174846457 1.95e-03 30_[+2(1.44e-05)]_42 chr2:153097246-153097326 4.82e-04 51_[+5(1.58e-05)]_5_[+2(3.02e-05)]_\ 8 chr5:77973829-77973909 1.83e-02 80 chr1:227523600-227523680 7.92e-01 80 chr1:244417952-244418032 7.86e-03 35_[+1(1.57e-05)]_37 chr21:36568581-36568661 1.79e-04 38_[+3(2.81e-05)]_13_[+2(3.02e-05)]_\ 13 chr3:31514554-31514634 2.69e-04 21_[+5(1.58e-05)]_32_[+2(3.02e-05)]_\ 11 chr8:105606320-105606400 8.96e-06 44_[+5(1.58e-05)]_5_[+2(3.02e-05)]_\ 15 chr14:31496072-31496152 9.27e-02 80 chrX:123096854-123096934 1.57e-02 20_[+1(1.57e-05)]_52 chr3:43368974-43369054 5.56e-02 51_[+1(1.57e-05)]_21 chr2:65802304-65802384 4.06e-02 20_[+1(1.57e-05)]_52 chr6:14721348-14721428 2.19e-01 80 chr12:29672633-29672713 1.37e-02 18_[+1(1.57e-05)]_54 chr20:16452777-16452857 4.30e-02 2_[+1(5.10e-05)]_70 chr15:68695895-68695975 8.90e-06 25_[+3(2.81e-05)]_[+5(1.58e-05)]_6_\ [+2(3.02e-05)]_25 chr16:11428841-11428921 3.67e-06 1_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ [+3(5.37e-05)]_50 chr6:39189700-39189780 4.75e-03 11_[+3(8.06e-05)]_23_[+1(1.57e-05)]_\ 30 chr21:40794747-40794827 7.01e-01 80 chr16:69899809-69899889 1.56e-01 80 chr18:1003650-1003730 2.50e-03 57_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 2 chr4:103541959-103542039 4.60e-02 70_[+2(6.48e-05)]_2 chr12:113660646-11366072 1.23e-03 23_[+2(1.44e-05)]_49 chr2:46451996-46452076 3.75e-02 26_[+1(5.10e-05)]_46 chr10:90713582-90713662 9.62e-02 80 chr2:173111428-173111508 2.95e-03 35_[+4(1.44e-05)]_37 chr21:47020372-47020452 7.90e-05 15_[+3(2.81e-05)]_13_[+2(3.02e-05)]_\ 36 chr1:237077898-237077978 4.04e-03 57_[+4(1.44e-05)]_15 chr8:134588408-134588488 9.10e-05 15_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ 44 chr10:95924914-95924994 1.04e-02 32_[+1(1.57e-05)]_40 chr18:1464643-1464723 2.03e-03 54_[+1(1.57e-05)]_18 chr9:100937003-100937083 2.68e-02 67_[+5(1.58e-05)]_5 chrX:40163243-40163323 2.11e-07 16_[+3(2.81e-05)]_[+5(1.58e-05)]_5_\ [+2(3.02e-05)]_35 chr1:39856152-39856232 3.73e-01 80 chr6:53349546-53349626 4.91e-02 16_[+1(1.57e-05)]_56 chr19:35759281-35759361 6.49e-01 80 chr15:80346692-80346772 7.47e-01 80 chr17:73266616-73266696 3.64e-01 80 chr1:247609209-247609289 4.27e-03 9_[+3(8.06e-05)]_51_[+1(7.09e-05)]_\ 4 chr17:72426854-72426934 6.50e-04 4_[+1(3.38e-05)]_68 chr3:57926995-57927075 4.22e-05 6_[+1(3.38e-05)]_5_[+4(1.44e-05)]_\ [+3(5.37e-05)]_45 chr1:33862248-33862328 4.63e-02 45_[+2(8.99e-05)]_27 chr4:122875211-122875291 2.09e-03 61_[+4(8.43e-05)]_11 chr5:41738895-41738975 3.37e-02 7_[+1(1.57e-05)]_65 chr1:230312958-230313038 8.26e-02 80 chr5:72114902-72114982 1.99e-04 1_[+1(3.38e-05)]_16_[+3(5.37e-05)]_\ 47 chr5:6408116-6408196 2.52e-01 80 chr15:70717285-70717365 4.08e-05 4_[+1(3.38e-05)]_13_[+3(5.37e-05)]_\ 47 chr19:29026307-29026387 3.71e-05 29_[+2(1.44e-05)]_43 chr12:116720277-11672035 1.65e-02 47_[+2(1.44e-05)]_25 chr1:12805149-12805229 1.66e-03 [+1(7.09e-05)]_6_[+3(2.81e-05)]_58 chr7:135883106-135883186 4.29e-01 80 chr19:10399357-10399437 1.93e-03 35_[+2(1.44e-05)]_37 chr21:35964841-35964921 2.50e-01 80 chr2:17830010-17830090 1.92e-02 45_[+2(1.44e-05)]_27 chr7:143110960-143111040 2.13e-02 43_[+1(3.38e-05)]_29 chr19:45083076-45083156 4.21e-04 26_[+3(2.81e-05)]_13_[+2(3.02e-05)]_\ 25 chr10:23026653-23026733 7.44e-03 45_[+1(1.57e-05)]_27 chr12:54701038-54701118 4.67e-02 80 chr5:175874921-175875001 1.98e-02 60_[+2(1.44e-05)]_12 chr17:65989814-65989894 9.86e-01 80 chr2:3252663-3252743 6.92e-06 56_[+5(1.58e-05)]_5_[+2(3.02e-05)]_\ 3 chr10:49614507-49614587 2.43e-04 47_[+1(3.38e-05)]_25 chr17:13981472-13981552 6.57e-02 80 chr21:35964640-35964720 4.06e-02 80 chr17:40895826-40895906 4.65e-03 59_[+2(1.44e-05)]_13 chr7:10688075-10688155 6.87e-03 34_[+1(3.38e-05)]_38 chr16:53537486-53537566 8.02e-03 26_[+1(3.38e-05)]_46 chr2:10091600-10091680 2.60e-01 80 chr12:47672049-47672129 3.48e-05 41_[+1(5.10e-05)]_31 chr3:157170142-157170222 5.30e-01 80 chr16:68766049-68766129 1.04e-02 20_[+1(1.57e-05)]_52 chr12:47638840-47638920 2.23e-02 64_[+2(4.67e-05)]_8 chr6:69345077-69345157 5.70e-01 80 chr6:26553678-26553758 5.36e-01 80 chr6:40132380-40132460 8.72e-02 43_[+1(3.38e-05)]_29 chr18:29598481-29598561 2.03e-03 4_[+1(7.09e-05)]_30_[+1(1.57e-05)]_\ 30 chr8:41649788-41649868 5.06e-03 44_[+2(1.44e-05)]_28 chr8:100782619-100782699 4.56e-02 42_[+2(3.02e-05)]_30 chr4:99390127-99390207 3.14e-02 65_[+2(1.44e-05)]_7 chr1:149973414-149973494 1.21e-01 9_[+1(7.09e-05)]_63 chr19:36207886-36207966 1.78e-01 80 chr4:38619161-38619241 4.51e-02 80 chr21:44394984-44395064 1.50e-01 80 chr10:29672429-29672509 4.88e-02 38_[+1(3.38e-05)]_34 chr12:98927630-98927710 3.22e-02 80 chr1:40866215-40866295 7.23e-02 39_[+1(1.57e-05)]_33 chr22:22378254-22378334 1.85e-01 80 chr2:101925451-101925531 7.81e-01 80 chr16:12510404-12510484 1.77e-05 45_[+1(1.57e-05)]_5_[+4(2.68e-05)]_\ [+3(5.37e-05)]_6 chr15:35967189-35967269 9.62e-03 80 chr1:40367569-40367649 9.47e-01 80 chr10:73119403-73119483 3.83e-03 48_[+2(1.44e-05)]_24 chr16:11188196-11188276 2.71e-04 31_[+2(6.48e-05)]_41 chr18:5295265-5295345 8.23e-01 80 chr2:161851097-161851177 1.04e-02 65_[+1(1.57e-05)]_7 chr18:3639570-3639650 2.14e-02 38_[+1(1.57e-05)]_34 chr17:44344238-44344318 3.08e-01 80 chr19:36208086-36208166 6.26e-01 80 chr17:13498199-13498279 5.66e-02 80 chr4:2384572-2384652 9.65e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************