******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF740.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr7:67876022-67876102 1.0000 80 chr1:244321495-244321575 1.0000 80 chr11:59727470-59727550 1.0000 80 chr3:151279749-151279829 1.0000 80 chr10:42866296-42866376 1.0000 80 chr7:137030961-137031041 1.0000 80 chr6:169486240-169486320 1.0000 80 chr2:160749605-160749685 1.0000 80 chr18:2164810-2164890 1.0000 80 chr5:121215685-121215765 1.0000 80 chr3:13692681-13692761 1.0000 80 chr11:37880519-37880599 1.0000 80 chr6:17221026-17221106 1.0000 80 chr1:179495880-179495960 1.0000 80 chr3:31353600-31353680 1.0000 80 chr2:34119619-34119699 1.0000 80 chr3:111199096-111199176 1.0000 80 chr11:20222027-20222107 1.0000 80 chr9:74569742-74569822 1.0000 80 chr7:137944592-137944672 1.0000 80 chr2:30475443-30475523 1.0000 80 chr10:82727321-82727401 1.0000 80 chr10:12486289-12486369 1.0000 80 chr3:112868306-112868386 1.0000 80 chr19:34096757-34096837 1.0000 80 chr8:18131592-18131672 1.0000 80 chr12:15077625-15077705 1.0000 80 chr16:50528572-50528652 1.0000 80 chr7:54746608-54746688 1.0000 80 chr19:21880693-21880773 1.0000 80 chr11:95343501-95343581 1.0000 80 chr11:19110501-19110581 1.0000 80 chr8:131674379-131674459 1.0000 80 chr8:9885467-9885547 1.0000 80 chr4:39033386-39033466 1.0000 80 chr11:7102901-7102981 1.0000 80 chr7:7306011-7306091 1.0000 80 chr7:22749197-22749277 1.0000 80 chr2:205052444-205052524 1.0000 80 chr6:31794062-31794142 1.0000 80 chr1:95396971-95397051 1.0000 80 chr22:17284308-17284388 1.0000 80 chr2:146611758-146611838 1.0000 80 chrX:140005469-140005549 1.0000 80 chr12:21387516-21387596 1.0000 80 chrX:132017528-132017608 1.0000 80 chr7:71101002-71101082 1.0000 80 chr5:61601282-61601362 1.0000 80 chr6:86082364-86082444 1.0000 80 chr1:244325635-244325715 1.0000 80 chr2:74531964-74532044 1.0000 80 chr7:46500937-46501017 1.0000 80 chr1:185310682-185310762 1.0000 80 chr22:26121810-26121890 1.0000 80 chr2:68899267-68899347 1.0000 80 chr4:185520747-185520827 1.0000 80 chr11:28192475-28192555 1.0000 80 chr1:247535306-247535386 1.0000 80 chr16:65798752-65798832 1.0000 80 chr10:17134298-17134378 1.0000 80 chrX:47668978-47669058 1.0000 80 chr18:28113811-28113891 1.0000 80 chr1:247541288-247541368 1.0000 80 chr2:152100092-152100172 1.0000 80 chr2:113209052-113209132 1.0000 80 chr19:21785094-21785174 1.0000 80 chr5:2156579-2156659 1.0000 80 chr22:22173383-22173463 1.0000 80 chrX:63658087-63658167 1.0000 80 chr1:144538853-144538933 1.0000 80 chr7:137998685-137998765 1.0000 80 chr19:35166274-35166354 1.0000 80 chr5:85868758-85868838 1.0000 80 chr10:21552868-21552948 1.0000 80 chr2:125751514-125751594 1.0000 80 chr6:31794324-31794404 1.0000 80 chr8:30060513-30060593 1.0000 80 chr5:107757615-107757695 1.0000 80 chr7:92314977-92315057 1.0000 80 chr1:29211034-29211114 1.0000 80 chr4:165972084-165972164 1.0000 80 chr4:40241278-40241358 1.0000 80 chr1:236667815-236667895 1.0000 80 chr19:21803943-21804023 1.0000 80 chr6:41260584-41260664 1.0000 80 chr6:100022254-100022334 1.0000 80 chr7:138040121-138040201 1.0000 80 chr8:29217329-29217409 1.0000 80 chr7:64682266-64682346 1.0000 80 chr3:42852677-42852757 1.0000 80 chr5:29194283-29194363 1.0000 80 chr18:9874923-9875003 1.0000 80 chr1:168302912-168302992 1.0000 80 chr7:138048642-138048722 1.0000 80 chr1:38026117-38026197 1.0000 80 chr12:108848510-10884859 1.0000 80 chr19:21318101-21318181 1.0000 80 chr1:247535507-247535587 1.0000 80 chr12:113015449-11301552 1.0000 80 chr10:89410751-89410831 1.0000 80 chr7:140186607-140186687 1.0000 80 chr14:77507549-77507629 1.0000 80 chrX:6903807-6903887 1.0000 80 chr7:30767745-30767825 1.0000 80 chr7:156413038-156413118 1.0000 80 chr7:99432558-99432638 1.0000 80 chr8:105679306-105679386 1.0000 80 chr12:119894808-11989488 1.0000 80 chr7:149261862-149261942 1.0000 80 chr7:99722045-99722125 1.0000 80 chr1:67381043-67381123 1.0000 80 chr19:51795313-51795393 1.0000 80 chr5:43571061-43571141 1.0000 80 chr1:17219532-17219612 1.0000 80 chr1:55417631-55417711 1.0000 80 chr1:12508235-12508315 1.0000 80 chr11:3531025-3531105 1.0000 80 chr7:28865580-28865660 1.0000 80 chr10:12488497-12488577 1.0000 80 chr1:16843656-16843736 1.0000 80 chr7:64834872-64834952 1.0000 80 chr22:22256059-22256139 1.0000 80 chr13:25199574-25199654 1.0000 80 chr3:169745671-169745751 1.0000 80 chr5:77074284-77074364 1.0000 80 chr4:178325669-178325749 1.0000 80 chr5:149322933-149323013 1.0000 80 chr2:112337274-112337354 1.0000 80 chr3:171695333-171695413 1.0000 80 chr16:81131942-81132022 1.0000 80 chr1:161527711-161527791 1.0000 80 chr8:130091053-130091133 1.0000 80 chr7:111199672-111199752 1.0000 80 chr11:125431962-12543204 1.0000 80 chr11:46264296-46264376 1.0000 80 chr4:138889183-138889263 1.0000 80 chr22:22199468-22199548 1.0000 80 chr4:76755710-76755790 1.0000 80 chrX:2467531-2467611 1.0000 80 chr21:19062521-19062601 1.0000 80 chr4:38319056-38319136 1.0000 80 chr7:123633141-123633221 1.0000 80 chr10:116810240-11681032 1.0000 80 chr1:16972298-16972378 1.0000 80 chr19:12993611-12993691 1.0000 80 chr3:9686016-9686096 1.0000 80 chr17:64730812-64730892 1.0000 80 chr16:9692706-9692786 1.0000 80 chr5:54117896-54117976 1.0000 80 chr1:150681685-150681765 1.0000 80 chr4:144284053-144284133 1.0000 80 chr17:16825860-16825940 1.0000 80 chr6:15198171-15198251 1.0000 80 chr8:62632973-62633053 1.0000 80 chr16:87886829-87886909 1.0000 80 chr22:21447703-21447783 1.0000 80 chr6:47384600-47384680 1.0000 80 chr12:113154063-11315414 1.0000 80 chr7:138043619-138043699 1.0000 80 chr10:26051017-26051097 1.0000 80 chr12:32207659-32207739 1.0000 80 chr7:106280305-106280385 1.0000 80 chr22:23543778-23543858 1.0000 80 chr5:67717463-67717543 1.0000 80 chr1:62332829-62332909 1.0000 80 chr7:32579102-32579182 1.0000 80 chr7:29834761-29834841 1.0000 80 chr2:205335615-205335695 1.0000 80 chr6:31704959-31705039 1.0000 80 chr6:24760071-24760151 1.0000 80 chr3:128597089-128597169 1.0000 80 chr6:43893927-43894007 1.0000 80 chr1:100001499-100001579 1.0000 80 chr17:58747239-58747319 1.0000 80 chr10:125701701-12570178 1.0000 80 chr19:21794582-21794662 1.0000 80 chr11:67278463-67278543 1.0000 80 chr7:137625785-137625865 1.0000 80 chr1:227038616-227038696 1.0000 80 chr2:196686410-196686490 1.0000 80 chr3:39067336-39067416 1.0000 80 chr1:142886528-142886608 1.0000 80 chr6:36852554-36852634 1.0000 80 chr3:21557081-21557161 1.0000 80 chr7:92778250-92778330 1.0000 80 chr11:57679171-57679251 1.0000 80 chr1:167130626-167130706 1.0000 80 chr7:30801530-30801610 1.0000 80 chr1:68388954-68389034 1.0000 80 chr8:40983657-40983737 1.0000 80 chr1:213897768-213897848 1.0000 80 chr2:13191688-13191768 1.0000 80 chr6:52569701-52569781 1.0000 80 chr6:147788826-147788906 1.0000 80 chr4:107226753-107226833 1.0000 80 chr8:125461688-125461768 1.0000 80 chr1:207917671-207917751 1.0000 80 chr9:139684092-139684172 1.0000 80 chr6:110908675-110908755 1.0000 80 chr11:125143491-12514357 1.0000 80 chrX:99866262-99866342 1.0000 80 chr22:19668391-19668471 1.0000 80 chr16:28550730-28550810 1.0000 80 chr1:156663736-156663816 1.0000 80 chr15:81062326-81062406 1.0000 80 chr4:185263484-185263564 1.0000 80 chr7:16699953-16700033 1.0000 80 chr10:4909335-4909415 1.0000 80 chr20:30093773-30093853 1.0000 80 chr12:65155111-65155191 1.0000 80 chr7:106485181-106485261 1.0000 80 chr17:61510137-61510217 1.0000 80 chr19:52464343-52464423 1.0000 80 chr7:107758475-107758555 1.0000 80 chr17:25435117-25435197 1.0000 80 chr19:50877529-50877609 1.0000 80 chr1:55698978-55699058 1.0000 80 chr17:60712082-60712162 1.0000 80 chr6:37396483-37396563 1.0000 80 chr20:46236953-46237033 1.0000 80 chr4:8244721-8244801 1.0000 80 chr9:131058201-131058281 1.0000 80 chr20:46237270-46237350 1.0000 80 chr3:39363818-39363898 1.0000 80 chr7:22864502-22864582 1.0000 80 chr16:48333598-48333678 1.0000 80 chr17:75084052-75084132 1.0000 80 chr1:53101510-53101590 1.0000 80 chr10:104215047-10421512 1.0000 80 chr10:72434169-72434249 1.0000 80 chr9:99994433-99994513 1.0000 80 chr17:15430280-15430360 1.0000 80 chr5:95043464-95043544 1.0000 80 chr2:10416256-10416336 1.0000 80 chr10:12487345-12487425 1.0000 80 chr6:158174112-158174192 1.0000 80 chr1:116820572-116820652 1.0000 80 chr20:353282-353362 1.0000 80 chr6:159133029-159133109 1.0000 80 chr18:71856651-71856731 1.0000 80 chrX:3488833-3488913 1.0000 80 chr1:12510019-12510099 1.0000 80 chr1:22231139-22231219 1.0000 80 chr2:46981234-46981314 1.0000 80 chr1:147734071-147734151 1.0000 80 chr2:62518311-62518391 1.0000 80 chr19:21793723-21793803 1.0000 80 chr16:31033535-31033615 1.0000 80 chr15:34628810-34628890 1.0000 80 chr7:135594161-135594241 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF740/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF740.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.28 C 0.227 G 0.229 T 0.265 Background letter frequencies (from file dataset with add-one prior applied): A 0.28 C 0.227 G 0.229 T 0.265 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GATGGAGT MEME-1 width = 8 sites = 85 llr = 879 E-value = 8.8e-137 ******************************************************************************** -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2a:::a:: pos.-specific C :::::::: probability G 8::aa:a: matrix T ::a::::a bits 2.1 * * 1.9 **** ** 1.7 ******* 1.5 ******* Relative 1.3 ******** Entropy 1.1 ******** (14.9 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GATGGAGT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:31033535-31033615 56 1.51e-05 tcctattcaa gatggagt tgctctggtt chr18:71856651-71856731 8 1.51e-05 tattcaa gatggagt tgctctggtt chr6:159133029-159133109 49 1.51e-05 tcctattcaa gatggagt tgctgtggtt chr2:10416256-10416336 32 1.51e-05 cgctattcaa gatggagt cactctggtt chr5:95043464-95043544 4 1.51e-05 caa gatggagt ctgtctggct chr1:53101510-53101590 55 1.51e-05 ttagacacaa gatggagt cagctatgtc chr17:75084052-75084132 29 1.51e-05 ccctattcaa gatggagt tgctctggtt chr7:22864502-22864582 63 1.51e-05 ttagaagcaa gatggagt tggtgatgtc chr17:60712082-60712162 73 1.51e-05 cccttttaaa gatggagt chr1:55698978-55699058 10 1.51e-05 cctattcaa gatggagt cgctctggtt chr17:25435117-25435197 57 1.51e-05 ttaaaggcaa gatggagt aggttaggtc chr7:107758475-107758555 45 1.51e-05 tcctattcaa gatggagt tgttctggtt chr7:106485181-106485261 70 1.51e-05 ttagaaccaa gatggagt tgg chr10:4909335-4909415 43 1.51e-05 ttagaagcaa gatggagt cagttaagtt chr15:81062326-81062406 41 1.51e-05 ccctgttcaa gatggagt cgctgtggtt chrX:99866262-99866342 67 1.51e-05 tcctattcaa gatggagt tgctct chr8:125461688-125461768 50 1.51e-05 ctttattcaa gatggagt cactctggtt chr8:40983657-40983737 18 1.51e-05 tcctgtttaa gatggagt tgctgtggtt chr2:196686410-196686490 68 1.51e-05 tagcatccaa gatggagt tgctt chr11:67278463-67278543 42 1.51e-05 tcctattcaa gatggagt tgctctggtt chr17:58747239-58747319 30 1.51e-05 ccctcttcaa gatggagt tgctccagtt chr1:100001499-100001579 32 1.51e-05 tcctattcaa gatggagt tgctctagtt chr7:29834761-29834841 18 1.51e-05 tcctattcaa gatggagt tgctctggtt chr7:32579102-32579182 73 1.51e-05 ctttattcaa gatggagt chr1:62332829-62332909 42 1.51e-05 cgctattcaa gatggagt tgctctggtt chr10:26051017-26051097 25 1.51e-05 ccctattcaa gatggagt tgctgtggtt chr12:113154063-11315414 36 1.51e-05 ctctacacaa gatggagt cactctggtt chr6:47384600-47384680 51 1.51e-05 ccaaaagcaa gatggagt cagccatgtt chr6:15198171-15198251 57 1.51e-05 tcctattcaa gatggagt tgctctggtt chr17:16825860-16825940 16 1.51e-05 ccttatccaa gatggagt cagtctggtt chr17:64730812-64730892 46 1.51e-05 ccttattcaa gatggagt cactctggtt chr3:9686016-9686096 68 1.51e-05 AAagaagcaa gatggagt tggtt chr7:123633141-123633221 41 1.51e-05 ccctattcaa gatggagt cactctggtt chr4:178325669-178325749 17 1.51e-05 tcagaagcaa gatggagt cggttaggtt chr3:169745671-169745751 9 1.51e-05 ctattcaa gatggagt tgctctggtt chr1:16843656-16843736 10 1.51e-05 tagaaccaa gatggagt cagccatgtc chr19:51795313-51795393 25 1.51e-05 ccctgttcaa gatggagt tactctggtt chr1:67381043-67381123 20 1.51e-05 ttagaagcaa gatggagt cagttaggtc chr12:119894808-11989488 2 1.51e-05 a gatggagt tgctctggtt chr7:156413038-156413118 37 1.51e-05 tcctgtttaa gatggagt tgctctggtt chr7:140186607-140186687 40 1.51e-05 ttagaagcaa gatggagt cagttaagtt chr12:113015449-11301552 15 1.51e-05 ccctattcaa gatggagt tgctctggtt chr1:168302912-168302992 49 1.51e-05 tcctattcaa gatggagt tgctcccgct chr6:41260584-41260664 44 1.51e-05 tcctattcaa gatggagt tgctctggtt chr5:107757615-107757695 4 1.51e-05 caa gatggagt cactctggtt chr8:30060513-30060593 42 1.51e-05 ctttttctaa gatggagt tagttatgtc chrX:63658087-63658167 21 1.51e-05 ctagacacaa gatggagt cagctatgtc chr1:247541288-247541368 54 1.51e-05 gcccattcga gatggagt agttctggtt chrX:47668978-47669058 6 1.51e-05 ttcaa gatggagt tactctggtt chr11:28192475-28192555 16 1.51e-05 ccctattcaa gatggagt cgctgtggtt chr2:68899267-68899347 23 1.51e-05 ccctattcaa gatggagt gactctggtt chr7:71101002-71101082 56 1.51e-05 ccctattcaa gatggagt cactctggtt chr12:21387516-21387596 23 1.51e-05 atagaagcaa gatggagt tggttaggtc chrX:140005469-140005549 3 1.51e-05 aa gatggagt cactctggtt chr2:205052444-205052524 4 1.51e-05 caa gatggagt tgctctggtt chr9:74569742-74569822 29 1.51e-05 tcctattcaa gatggagt tgctctggtt chr3:111199096-111199176 18 1.51e-05 ccctattcaa gatggagt tgctctggtt chr3:31353600-31353680 26 1.51e-05 ccctattcaa gatggagt cactctggtt chr6:17221026-17221106 35 1.51e-05 ccccattcaa gatggagt cgctctggtt chr5:121215685-121215765 45 1.51e-05 tcctattcaa gatggagt tgctctggtt chr7:137030961-137031041 31 1.51e-05 acctattcaa gatggagt cgctctggtt chr1:244321495-244321575 36 1.51e-05 acctattcaa gatggagt cactctggct chr7:67876022-67876102 68 1.51e-05 tgttattcac gatggagt tgctc chr6:158174112-158174192 29 3.37e-05 tacagaacaa aatggagt ctcttatgtc chr17:15430280-15430360 37 3.37e-05 accaaaccaa aatggagt tactcacggt chr19:52464343-52464423 72 3.37e-05 tacagaacaa aatggagt t chr4:185263484-185263564 24 3.37e-05 ggccaaccca aatggagt cactcatgtt chr16:28550730-28550810 45 3.37e-05 ttttttttga aatggagt ctctgtcgcc chr6:110908675-110908755 25 3.37e-05 accaaaccaa aatggagt cactcatgct chr9:139684092-139684172 68 3.37e-05 tacagatcaa aatggagt ttctt chr1:207917671-207917751 6 3.37e-05 aaaaa aatggagt tgcttcggtt chr6:36852554-36852634 6 3.37e-05 actaa aatggagt cactcatgct chr1:142886528-142886608 62 3.37e-05 accaaaccaa aatggagt cactcatgct chr6:24760071-24760151 32 3.37e-05 atcaaaccaa aatggagt cacttatgct chr11:125431962-12543204 31 3.37e-05 accaaaccaa aatggagt tactcatgct chr5:149322933-149323013 22 3.37e-05 tacagaacaa aatggagt ttcttatgtc chr13:25199574-25199654 26 3.37e-05 agcaaaccaa aatggagt tactcctgcc chr7:149261862-149261942 36 3.37e-05 tcagaatgaa aatggagt cacttgtgtt chr19:21803943-21804023 28 3.37e-05 tctttttcaa aatggagt cccttatgtc chr2:152100092-152100172 65 3.37e-05 accaaaccga aatggagt cactcatg chr11:19110501-19110581 9 3.37e-05 ctattcaa aatggagt cactctagtt chr19:21880693-21880773 2 3.37e-05 a aatggagt ctgtccggct chr2:46981234-46981314 22 4.60e-05 ccctattcaa gatggggt tgctctggtt chr2:113209052-113209132 30 6.36e-05 ccctattcaa tatggagt cgctctggtt chr3:39067336-39067416 16 8.21e-05 cccaattcaa gatgaagt ttctctggtt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:31033535-31033615 1.5e-05 55_[+1]_17 chr18:71856651-71856731 1.5e-05 7_[+1]_65 chr6:159133029-159133109 1.5e-05 48_[+1]_24 chr2:10416256-10416336 1.5e-05 31_[+1]_41 chr5:95043464-95043544 1.5e-05 3_[+1]_69 chr1:53101510-53101590 1.5e-05 54_[+1]_18 chr17:75084052-75084132 1.5e-05 28_[+1]_44 chr7:22864502-22864582 1.5e-05 62_[+1]_10 chr17:60712082-60712162 1.5e-05 72_[+1] chr1:55698978-55699058 1.5e-05 9_[+1]_63 chr17:25435117-25435197 1.5e-05 56_[+1]_16 chr7:107758475-107758555 1.5e-05 44_[+1]_28 chr7:106485181-106485261 1.5e-05 69_[+1]_3 chr10:4909335-4909415 1.5e-05 42_[+1]_30 chr15:81062326-81062406 1.5e-05 40_[+1]_32 chrX:99866262-99866342 1.5e-05 66_[+1]_6 chr8:125461688-125461768 1.5e-05 49_[+1]_23 chr8:40983657-40983737 1.5e-05 17_[+1]_55 chr2:196686410-196686490 1.5e-05 67_[+1]_5 chr11:67278463-67278543 1.5e-05 41_[+1]_31 chr17:58747239-58747319 1.5e-05 29_[+1]_43 chr1:100001499-100001579 1.5e-05 31_[+1]_41 chr7:29834761-29834841 1.5e-05 17_[+1]_55 chr7:32579102-32579182 1.5e-05 72_[+1] chr1:62332829-62332909 1.5e-05 41_[+1]_31 chr10:26051017-26051097 1.5e-05 24_[+1]_48 chr12:113154063-11315414 1.5e-05 35_[+1]_37 chr6:47384600-47384680 1.5e-05 50_[+1]_22 chr6:15198171-15198251 1.5e-05 56_[+1]_16 chr17:16825860-16825940 1.5e-05 15_[+1]_57 chr17:64730812-64730892 1.5e-05 45_[+1]_27 chr3:9686016-9686096 1.5e-05 67_[+1]_5 chr7:123633141-123633221 1.5e-05 40_[+1]_32 chr4:178325669-178325749 1.5e-05 16_[+1]_56 chr3:169745671-169745751 1.5e-05 8_[+1]_64 chr1:16843656-16843736 1.5e-05 9_[+1]_63 chr19:51795313-51795393 1.5e-05 24_[+1]_48 chr1:67381043-67381123 1.5e-05 19_[+1]_53 chr12:119894808-11989488 1.5e-05 1_[+1]_71 chr7:156413038-156413118 1.5e-05 36_[+1]_36 chr7:140186607-140186687 1.5e-05 39_[+1]_33 chr12:113015449-11301552 1.5e-05 14_[+1]_58 chr1:168302912-168302992 1.5e-05 48_[+1]_24 chr6:41260584-41260664 1.5e-05 43_[+1]_29 chr5:107757615-107757695 1.5e-05 3_[+1]_69 chr8:30060513-30060593 1.5e-05 41_[+1]_31 chrX:63658087-63658167 1.5e-05 20_[+1]_52 chr1:247541288-247541368 1.5e-05 53_[+1]_19 chrX:47668978-47669058 1.5e-05 5_[+1]_67 chr11:28192475-28192555 1.5e-05 15_[+1]_57 chr2:68899267-68899347 1.5e-05 22_[+1]_50 chr7:71101002-71101082 1.5e-05 55_[+1]_17 chr12:21387516-21387596 1.5e-05 22_[+1]_50 chrX:140005469-140005549 1.5e-05 2_[+1]_70 chr2:205052444-205052524 1.5e-05 3_[+1]_69 chr9:74569742-74569822 1.5e-05 28_[+1]_44 chr3:111199096-111199176 1.5e-05 17_[+1]_55 chr3:31353600-31353680 1.5e-05 25_[+1]_47 chr6:17221026-17221106 1.5e-05 34_[+1]_38 chr5:121215685-121215765 1.5e-05 44_[+1]_28 chr7:137030961-137031041 1.5e-05 30_[+1]_42 chr1:244321495-244321575 1.5e-05 35_[+1]_37 chr7:67876022-67876102 1.5e-05 67_[+1]_5 chr6:158174112-158174192 3.4e-05 28_[+1]_44 chr17:15430280-15430360 3.4e-05 36_[+1]_36 chr19:52464343-52464423 3.4e-05 71_[+1]_1 chr4:185263484-185263564 3.4e-05 23_[+1]_49 chr16:28550730-28550810 3.4e-05 44_[+1]_28 chr6:110908675-110908755 3.4e-05 24_[+1]_48 chr9:139684092-139684172 3.4e-05 67_[+1]_5 chr1:207917671-207917751 3.4e-05 5_[+1]_67 chr6:36852554-36852634 3.4e-05 5_[+1]_67 chr1:142886528-142886608 3.4e-05 61_[+1]_11 chr6:24760071-24760151 3.4e-05 31_[+1]_41 chr11:125431962-12543204 3.4e-05 30_[+1]_42 chr5:149322933-149323013 3.4e-05 21_[+1]_51 chr13:25199574-25199654 3.4e-05 25_[+1]_47 chr7:149261862-149261942 3.4e-05 35_[+1]_37 chr19:21803943-21804023 3.4e-05 27_[+1]_45 chr2:152100092-152100172 3.4e-05 64_[+1]_8 chr11:19110501-19110581 3.4e-05 8_[+1]_64 chr19:21880693-21880773 3.4e-05 1_[+1]_71 chr2:46981234-46981314 4.6e-05 21_[+1]_51 chr2:113209052-113209132 6.4e-05 29_[+1]_43 chr3:39067336-39067416 8.2e-05 15_[+1]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GATGGAGT width=8 seqs=85 chr16:31033535-31033615 ( 56) GATGGAGT 1 chr18:71856651-71856731 ( 8) GATGGAGT 1 chr6:159133029-159133109 ( 49) GATGGAGT 1 chr2:10416256-10416336 ( 32) GATGGAGT 1 chr5:95043464-95043544 ( 4) GATGGAGT 1 chr1:53101510-53101590 ( 55) GATGGAGT 1 chr17:75084052-75084132 ( 29) GATGGAGT 1 chr7:22864502-22864582 ( 63) GATGGAGT 1 chr17:60712082-60712162 ( 73) GATGGAGT 1 chr1:55698978-55699058 ( 10) GATGGAGT 1 chr17:25435117-25435197 ( 57) GATGGAGT 1 chr7:107758475-107758555 ( 45) GATGGAGT 1 chr7:106485181-106485261 ( 70) GATGGAGT 1 chr10:4909335-4909415 ( 43) GATGGAGT 1 chr15:81062326-81062406 ( 41) GATGGAGT 1 chrX:99866262-99866342 ( 67) GATGGAGT 1 chr8:125461688-125461768 ( 50) GATGGAGT 1 chr8:40983657-40983737 ( 18) GATGGAGT 1 chr2:196686410-196686490 ( 68) GATGGAGT 1 chr11:67278463-67278543 ( 42) GATGGAGT 1 chr17:58747239-58747319 ( 30) GATGGAGT 1 chr1:100001499-100001579 ( 32) GATGGAGT 1 chr7:29834761-29834841 ( 18) GATGGAGT 1 chr7:32579102-32579182 ( 73) GATGGAGT 1 chr1:62332829-62332909 ( 42) GATGGAGT 1 chr10:26051017-26051097 ( 25) GATGGAGT 1 chr12:113154063-11315414 ( 36) GATGGAGT 1 chr6:47384600-47384680 ( 51) GATGGAGT 1 chr6:15198171-15198251 ( 57) GATGGAGT 1 chr17:16825860-16825940 ( 16) GATGGAGT 1 chr17:64730812-64730892 ( 46) GATGGAGT 1 chr3:9686016-9686096 ( 68) GATGGAGT 1 chr7:123633141-123633221 ( 41) GATGGAGT 1 chr4:178325669-178325749 ( 17) GATGGAGT 1 chr3:169745671-169745751 ( 9) GATGGAGT 1 chr1:16843656-16843736 ( 10) GATGGAGT 1 chr19:51795313-51795393 ( 25) GATGGAGT 1 chr1:67381043-67381123 ( 20) GATGGAGT 1 chr12:119894808-11989488 ( 2) GATGGAGT 1 chr7:156413038-156413118 ( 37) GATGGAGT 1 chr7:140186607-140186687 ( 40) GATGGAGT 1 chr12:113015449-11301552 ( 15) GATGGAGT 1 chr1:168302912-168302992 ( 49) GATGGAGT 1 chr6:41260584-41260664 ( 44) GATGGAGT 1 chr5:107757615-107757695 ( 4) GATGGAGT 1 chr8:30060513-30060593 ( 42) GATGGAGT 1 chrX:63658087-63658167 ( 21) GATGGAGT 1 chr1:247541288-247541368 ( 54) GATGGAGT 1 chrX:47668978-47669058 ( 6) GATGGAGT 1 chr11:28192475-28192555 ( 16) GATGGAGT 1 chr2:68899267-68899347 ( 23) GATGGAGT 1 chr7:71101002-71101082 ( 56) GATGGAGT 1 chr12:21387516-21387596 ( 23) GATGGAGT 1 chrX:140005469-140005549 ( 3) GATGGAGT 1 chr2:205052444-205052524 ( 4) GATGGAGT 1 chr9:74569742-74569822 ( 29) GATGGAGT 1 chr3:111199096-111199176 ( 18) GATGGAGT 1 chr3:31353600-31353680 ( 26) GATGGAGT 1 chr6:17221026-17221106 ( 35) GATGGAGT 1 chr5:121215685-121215765 ( 45) GATGGAGT 1 chr7:137030961-137031041 ( 31) GATGGAGT 1 chr1:244321495-244321575 ( 36) GATGGAGT 1 chr7:67876022-67876102 ( 68) GATGGAGT 1 chr6:158174112-158174192 ( 29) AATGGAGT 1 chr17:15430280-15430360 ( 37) AATGGAGT 1 chr19:52464343-52464423 ( 72) AATGGAGT 1 chr4:185263484-185263564 ( 24) AATGGAGT 1 chr16:28550730-28550810 ( 45) AATGGAGT 1 chr6:110908675-110908755 ( 25) AATGGAGT 1 chr9:139684092-139684172 ( 68) AATGGAGT 1 chr1:207917671-207917751 ( 6) AATGGAGT 1 chr6:36852554-36852634 ( 6) AATGGAGT 1 chr1:142886528-142886608 ( 62) AATGGAGT 1 chr6:24760071-24760151 ( 32) AATGGAGT 1 chr11:125431962-12543204 ( 31) AATGGAGT 1 chr5:149322933-149323013 ( 22) AATGGAGT 1 chr13:25199574-25199654 ( 26) AATGGAGT 1 chr7:149261862-149261942 ( 36) AATGGAGT 1 chr19:21803943-21804023 ( 28) AATGGAGT 1 chr2:152100092-152100172 ( 65) AATGGAGT 1 chr11:19110501-19110581 ( 9) AATGGAGT 1 chr19:21880693-21880773 ( 2) AATGGAGT 1 chr2:46981234-46981314 ( 22) GATGGGGT 1 chr2:113209052-113209132 ( 30) TATGGAGT 1 chr3:39067336-39067416 ( 16) GATGAAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.05851 E= 8.8e-137 -32 -1305 174 -449 184 -1305 -1305 -1305 -1305 -1305 -1305 192 -1305 -1305 213 -1305 -457 -1305 211 -1305 182 -1305 -428 -1305 -1305 -1305 213 -1305 -1305 -1305 -1305 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 85 E= 8.8e-137 0.223529 0.000000 0.764706 0.011765 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.011765 0.000000 0.988235 0.000000 0.988235 0.000000 0.011765 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-1 regular expression -------------------------------------------------------------------------------- [GA]ATGGAGT -------------------------------------------------------------------------------- Time 4.99 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCCATYT MEME-2 width = 8 sites = 85 llr = 783 E-value = 2.5e-094 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::a::: pos.-specific C a28a::5: probability G :::::::: matrix T :82::a4a bits 2.1 * * 1.9 * * * * 1.7 * *** * 1.5 * *** * Relative 1.3 ****** * Entropy 1.1 ****** * (13.3 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCATCT consensus CT T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:135594161-135594241 37 1.38e-05 accagagcaa ctccatct tgaataggag chrX:3488833-3488913 44 1.38e-05 accacagcaa ctccatct tgaatagggg chr4:8244721-8244801 49 1.38e-05 accagagcag ctccatct tgaatggggg chr12:65155111-65155191 36 1.38e-05 accagagcaa ctccatct tgaaaagggg chr4:107226753-107226833 19 1.38e-05 accagagcaa ctccatct tgaatagggg chr6:52569701-52569781 69 1.38e-05 accagagcaa ctccatct tgaa chr1:167130626-167130706 57 1.38e-05 accagagtga ctccatct tgaatagggg chr3:21557081-21557161 25 1.38e-05 gcacaactga ctccatct tgcttataac chr1:227038616-227038696 46 1.38e-05 accagagcaa ctccatct tgaataagag chr3:128597089-128597169 21 1.38e-05 acctaaccaa ctccatct tgcttctaac chr12:32207659-32207739 20 1.38e-05 accagagcaa ctccatct tgaatagggg chr7:138043619-138043699 39 1.38e-05 cccaaaagga ctccatct taaatagggg chr5:54117896-54117976 73 1.38e-05 accagaacaa ctccatct chr16:9692706-9692786 24 1.38e-05 gactcagttt ctccatct gtcaaacagC chr19:12993611-12993691 72 1.38e-05 acctaaccaa ctccatct t chr4:38319056-38319136 34 1.38e-05 accagagcaa ctccatct tgaatagggg chr21:19062521-19062601 63 1.38e-05 actagagtga ctccatct tgaatggggg chr1:161527711-161527791 27 1.38e-05 acataactaa ctccatct tagaaaaaga chr7:28865580-28865660 24 1.38e-05 accagagcaa ctccatct tgaataggag chr1:17219532-17219612 61 1.38e-05 acatggctga ctccatct tggttctagc chr5:43571061-43571141 37 1.38e-05 ttgaatgtga ctccatct agaagaataa chr7:30767745-30767825 35 1.38e-05 accagagcaa ctccatct tgaataggag chrX:6903807-6903887 48 1.38e-05 accagagcaa ctccatct tgaataggat chr12:108848510-10884859 20 1.38e-05 accagagcaa ctccatct taaataggac chr8:29217329-29217409 5 1.38e-05 gcaa ctccatct taactcggag chr4:165972084-165972164 56 1.38e-05 accagagcaa ctccatct tgagtagggg chr2:125751514-125751594 49 1.38e-05 accagagcaa ctccatct tgaacagtga chr19:35166274-35166354 66 1.38e-05 accagagcga ctccatct tgaatag chr4:185520747-185520827 69 1.38e-05 acctaaccga ctccatct tgcc chrX:132017528-132017608 73 1.38e-05 acataagtaa ctccatct chr2:146611758-146611838 54 1.38e-05 accagagtaa ctccatct tgaatagggg chr22:17284308-17284388 8 1.38e-05 agagcaa ctccatct taaacaggag chr1:95396971-95397051 21 1.38e-05 accaaagcaa ctccatct tgaatagggg chr7:54746608-54746688 60 1.38e-05 accagagcaa ctccatct tgaataagag chr16:50528572-50528652 54 1.38e-05 accagcccaa ctccatct tgaatagggg chr12:15077625-15077705 21 1.38e-05 gccagagcaa ctccatct tgaatagggg chr19:34096757-34096837 41 1.38e-05 accagagcaa ctccatct tgaatagggg chr3:112868306-112868386 27 1.38e-05 accagagaaa ctccatct tgaagaggag chr7:137944592-137944672 2 1.38e-05 a ctccatct tgcttctagc chr11:20222027-20222107 44 1.38e-05 accagagcaa ctccatct taagtaggag chr1:179495880-179495960 57 1.38e-05 accagagtga ctccatct tgaataaagt chr6:169486240-169486320 40 1.38e-05 accagagcaa ctccatct tgaatacgcc chr3:151279749-151279829 44 1.38e-05 accagagcaa ctccatct tgaaaagggg chr1:116820572-116820652 13 3.00e-05 acattagtga ctccattt tgattttgac chr9:99994433-99994513 51 3.00e-05 acataagaga ctccattt tgttctgtac chr7:30801530-30801610 10 3.00e-05 ttggctggg ctccattt agctgggcaa chr7:92778250-92778330 60 3.00e-05 accagagtga ctccattt tgaatgaggg chr1:150681685-150681765 42 3.00e-05 acataagaga ctccattt tgaaaaagac chr4:76755710-76755790 35 3.00e-05 acgtgagtga ctccattt tggtttggtc chr7:138048642-138048722 33 3.00e-05 gcatgactga ctccattt tggtttggtt chr5:29194283-29194363 61 3.00e-05 acagtagtga ctccattt tgattctgac chr3:42852677-42852757 67 3.00e-05 acataagaaa ctccattt tgatct chr7:64682266-64682346 10 3.00e-05 catgagtga ctccattt tggtttggtt chr6:100022254-100022334 18 3.00e-05 acacaagtga ctccattt tgatcttgac chr1:236667815-236667895 48 3.00e-05 acataagaga ctccattt tgaaaaagac chr1:185310682-185310762 38 3.00e-05 gcatgagtga ctccattt tggtttggtc chr11:95343501-95343581 41 3.00e-05 gcatgagtga ctccattt tagtttggtt chr11:37880519-37880599 30 3.00e-05 acataagaga ctccattt tgttctgtac chr10:42866296-42866376 4 3.00e-05 tga ctccattt cagcttggct chr20:353282-353362 12 4.18e-05 catggtaaaa ccccatct ctactaaaaa chr4:40241278-40241358 46 4.18e-05 catggtgaaa ccccatct ccactaaaaa chr1:168302912-168302992 23 5.57e-05 taggtttcag ccccattt tacccagctc chr7:138040121-138040201 28 5.57e-05 tagagtggga ccccattt caaacaaaaa chrX:2467531-2467611 48 9.07e-05 taagtctcag cttcattt tgcccagccc chr8:9885467-9885547 5 9.07e-05 aggc cttcattt tgggatattg chr9:74569742-74569822 3 9.07e-05 ag cttcattt tacccagctc chr16:31033535-31033615 30 1.21e-04 taggtctcag cctcattt tacccagttc chr6:159133029-159133109 23 1.21e-04 taggtctcgg cctcattt tacccagctc chr7:107758475-107758555 19 1.21e-04 taggtttcag cctcattt tacccagctc chrX:99866262-99866342 41 1.21e-04 taggtttcag cctcattt tacccagctc chr11:67278463-67278543 16 1.21e-04 taggtctcag cctcattt tacccagctc chr17:58747239-58747319 4 1.21e-04 cag cctcattt tacatagccc chr1:62332829-62332909 17 1.21e-04 taggtctcag cctcattt tacccagcgc chr6:15198171-15198251 31 1.21e-04 taggtctcag cctcattt tacccagctc chr7:123633141-123633221 16 1.21e-04 gaggtgtcag cctcattt tacccagccc chr16:81131942-81132022 61 1.21e-04 caagtctcag cctcattt tacccagccc chr6:41260584-41260664 18 1.21e-04 taggtctcag cctcattt tacccagctc chr1:247541288-247541368 30 1.21e-04 taggcctcag cctcattt tacccagccc chr1:244325635-244325715 69 1.21e-04 taggtctcag cctcattt tacc chr6:17221026-17221106 9 1.21e-04 ggtctccg cctcattt tacccagccc chr5:121215685-121215765 19 1.21e-04 taagtctcag cctcattt tacccagctc chr7:67876022-67876102 42 1.21e-04 taggtttcag cctcattt tacccagctg chr7:16699953-16700033 63 1.38e-04 cagagcgaga ctccatat ttaaaaaaaa chr10:89410751-89410831 51 1.38e-04 accagagtga ctccatat tgaacagggg chr10:21552868-21552948 18 1.49e-04 aacagtgaaa ctccgtct caaacaaaca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:135594161-135594241 1.4e-05 36_[+2]_36 chrX:3488833-3488913 1.4e-05 43_[+2]_29 chr4:8244721-8244801 1.4e-05 48_[+2]_24 chr12:65155111-65155191 1.4e-05 35_[+2]_37 chr4:107226753-107226833 1.4e-05 18_[+2]_54 chr6:52569701-52569781 1.4e-05 68_[+2]_4 chr1:167130626-167130706 1.4e-05 56_[+2]_16 chr3:21557081-21557161 1.4e-05 24_[+2]_48 chr1:227038616-227038696 1.4e-05 45_[+2]_27 chr3:128597089-128597169 1.4e-05 20_[+2]_52 chr12:32207659-32207739 1.4e-05 19_[+2]_53 chr7:138043619-138043699 1.4e-05 38_[+2]_34 chr5:54117896-54117976 1.4e-05 72_[+2] chr16:9692706-9692786 1.4e-05 23_[+2]_49 chr19:12993611-12993691 1.4e-05 71_[+2]_1 chr4:38319056-38319136 1.4e-05 33_[+2]_39 chr21:19062521-19062601 1.4e-05 62_[+2]_10 chr1:161527711-161527791 1.4e-05 26_[+2]_46 chr7:28865580-28865660 1.4e-05 23_[+2]_49 chr1:17219532-17219612 1.4e-05 60_[+2]_12 chr5:43571061-43571141 1.4e-05 36_[+2]_36 chr7:30767745-30767825 1.4e-05 34_[+2]_38 chrX:6903807-6903887 1.4e-05 47_[+2]_25 chr12:108848510-10884859 1.4e-05 19_[+2]_53 chr8:29217329-29217409 1.4e-05 4_[+2]_68 chr4:165972084-165972164 1.4e-05 55_[+2]_17 chr2:125751514-125751594 1.4e-05 48_[+2]_24 chr19:35166274-35166354 1.4e-05 65_[+2]_7 chr4:185520747-185520827 1.4e-05 68_[+2]_4 chrX:132017528-132017608 1.4e-05 72_[+2] chr2:146611758-146611838 1.4e-05 53_[+2]_19 chr22:17284308-17284388 1.4e-05 7_[+2]_65 chr1:95396971-95397051 1.4e-05 20_[+2]_52 chr7:54746608-54746688 1.4e-05 59_[+2]_13 chr16:50528572-50528652 1.4e-05 53_[+2]_19 chr12:15077625-15077705 1.4e-05 20_[+2]_52 chr19:34096757-34096837 1.4e-05 40_[+2]_32 chr3:112868306-112868386 1.4e-05 26_[+2]_46 chr7:137944592-137944672 1.4e-05 1_[+2]_71 chr11:20222027-20222107 1.4e-05 43_[+2]_29 chr1:179495880-179495960 1.4e-05 56_[+2]_16 chr6:169486240-169486320 1.4e-05 39_[+2]_33 chr3:151279749-151279829 1.4e-05 43_[+2]_29 chr1:116820572-116820652 3e-05 12_[+2]_60 chr9:99994433-99994513 3e-05 50_[+2]_22 chr7:30801530-30801610 3e-05 9_[+2]_63 chr7:92778250-92778330 3e-05 59_[+2]_13 chr1:150681685-150681765 3e-05 41_[+2]_31 chr4:76755710-76755790 3e-05 34_[+2]_38 chr7:138048642-138048722 3e-05 32_[+2]_40 chr5:29194283-29194363 3e-05 60_[+2]_12 chr3:42852677-42852757 3e-05 66_[+2]_6 chr7:64682266-64682346 3e-05 9_[+2]_63 chr6:100022254-100022334 3e-05 17_[+2]_55 chr1:236667815-236667895 3e-05 47_[+2]_25 chr1:185310682-185310762 3e-05 37_[+2]_35 chr11:95343501-95343581 3e-05 40_[+2]_32 chr11:37880519-37880599 3e-05 29_[+2]_43 chr10:42866296-42866376 3e-05 3_[+2]_69 chr20:353282-353362 4.2e-05 11_[+2]_61 chr4:40241278-40241358 4.2e-05 45_[+2]_27 chr1:168302912-168302992 5.6e-05 22_[+2]_50 chr7:138040121-138040201 5.6e-05 27_[+2]_45 chrX:2467531-2467611 9.1e-05 47_[+2]_25 chr8:9885467-9885547 9.1e-05 4_[+2]_68 chr9:74569742-74569822 9.1e-05 2_[+2]_70 chr16:31033535-31033615 0.00012 29_[+2]_43 chr6:159133029-159133109 0.00012 22_[+2]_50 chr7:107758475-107758555 0.00012 18_[+2]_54 chrX:99866262-99866342 0.00012 40_[+2]_32 chr11:67278463-67278543 0.00012 15_[+2]_57 chr17:58747239-58747319 0.00012 3_[+2]_69 chr1:62332829-62332909 0.00012 16_[+2]_56 chr6:15198171-15198251 0.00012 30_[+2]_42 chr7:123633141-123633221 0.00012 15_[+2]_57 chr16:81131942-81132022 0.00012 60_[+2]_12 chr6:41260584-41260664 0.00012 17_[+2]_55 chr1:247541288-247541368 0.00012 29_[+2]_43 chr1:244325635-244325715 0.00012 68_[+2]_4 chr6:17221026-17221106 0.00012 8_[+2]_64 chr5:121215685-121215765 0.00012 18_[+2]_54 chr7:67876022-67876102 0.00012 41_[+2]_31 chr7:16699953-16700033 0.00014 62_[+2]_10 chr10:89410751-89410831 0.00014 50_[+2]_22 chr10:21552868-21552948 0.00015 17_[+2]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCCATYT width=8 seqs=85 chr7:135594161-135594241 ( 37) CTCCATCT 1 chrX:3488833-3488913 ( 44) CTCCATCT 1 chr4:8244721-8244801 ( 49) CTCCATCT 1 chr12:65155111-65155191 ( 36) CTCCATCT 1 chr4:107226753-107226833 ( 19) CTCCATCT 1 chr6:52569701-52569781 ( 69) CTCCATCT 1 chr1:167130626-167130706 ( 57) CTCCATCT 1 chr3:21557081-21557161 ( 25) CTCCATCT 1 chr1:227038616-227038696 ( 46) CTCCATCT 1 chr3:128597089-128597169 ( 21) CTCCATCT 1 chr12:32207659-32207739 ( 20) CTCCATCT 1 chr7:138043619-138043699 ( 39) CTCCATCT 1 chr5:54117896-54117976 ( 73) CTCCATCT 1 chr16:9692706-9692786 ( 24) CTCCATCT 1 chr19:12993611-12993691 ( 72) CTCCATCT 1 chr4:38319056-38319136 ( 34) CTCCATCT 1 chr21:19062521-19062601 ( 63) CTCCATCT 1 chr1:161527711-161527791 ( 27) CTCCATCT 1 chr7:28865580-28865660 ( 24) CTCCATCT 1 chr1:17219532-17219612 ( 61) CTCCATCT 1 chr5:43571061-43571141 ( 37) CTCCATCT 1 chr7:30767745-30767825 ( 35) CTCCATCT 1 chrX:6903807-6903887 ( 48) CTCCATCT 1 chr12:108848510-10884859 ( 20) CTCCATCT 1 chr8:29217329-29217409 ( 5) CTCCATCT 1 chr4:165972084-165972164 ( 56) CTCCATCT 1 chr2:125751514-125751594 ( 49) CTCCATCT 1 chr19:35166274-35166354 ( 66) CTCCATCT 1 chr4:185520747-185520827 ( 69) CTCCATCT 1 chrX:132017528-132017608 ( 73) CTCCATCT 1 chr2:146611758-146611838 ( 54) CTCCATCT 1 chr22:17284308-17284388 ( 8) CTCCATCT 1 chr1:95396971-95397051 ( 21) CTCCATCT 1 chr7:54746608-54746688 ( 60) CTCCATCT 1 chr16:50528572-50528652 ( 54) CTCCATCT 1 chr12:15077625-15077705 ( 21) CTCCATCT 1 chr19:34096757-34096837 ( 41) CTCCATCT 1 chr3:112868306-112868386 ( 27) CTCCATCT 1 chr7:137944592-137944672 ( 2) CTCCATCT 1 chr11:20222027-20222107 ( 44) CTCCATCT 1 chr1:179495880-179495960 ( 57) CTCCATCT 1 chr6:169486240-169486320 ( 40) CTCCATCT 1 chr3:151279749-151279829 ( 44) CTCCATCT 1 chr1:116820572-116820652 ( 13) CTCCATTT 1 chr9:99994433-99994513 ( 51) CTCCATTT 1 chr7:30801530-30801610 ( 10) CTCCATTT 1 chr7:92778250-92778330 ( 60) CTCCATTT 1 chr1:150681685-150681765 ( 42) CTCCATTT 1 chr4:76755710-76755790 ( 35) CTCCATTT 1 chr7:138048642-138048722 ( 33) CTCCATTT 1 chr5:29194283-29194363 ( 61) CTCCATTT 1 chr3:42852677-42852757 ( 67) CTCCATTT 1 chr7:64682266-64682346 ( 10) CTCCATTT 1 chr6:100022254-100022334 ( 18) CTCCATTT 1 chr1:236667815-236667895 ( 48) CTCCATTT 1 chr1:185310682-185310762 ( 38) CTCCATTT 1 chr11:95343501-95343581 ( 41) CTCCATTT 1 chr11:37880519-37880599 ( 30) CTCCATTT 1 chr10:42866296-42866376 ( 4) CTCCATTT 1 chr20:353282-353362 ( 12) CCCCATCT 1 chr4:40241278-40241358 ( 46) CCCCATCT 1 chr1:168302912-168302992 ( 23) CCCCATTT 1 chr7:138040121-138040201 ( 28) CCCCATTT 1 chrX:2467531-2467611 ( 48) CTTCATTT 1 chr8:9885467-9885547 ( 5) CTTCATTT 1 chr9:74569742-74569822 ( 3) CTTCATTT 1 chr16:31033535-31033615 ( 30) CCTCATTT 1 chr6:159133029-159133109 ( 23) CCTCATTT 1 chr7:107758475-107758555 ( 19) CCTCATTT 1 chrX:99866262-99866342 ( 41) CCTCATTT 1 chr11:67278463-67278543 ( 16) CCTCATTT 1 chr17:58747239-58747319 ( 4) CCTCATTT 1 chr1:62332829-62332909 ( 17) CCTCATTT 1 chr6:15198171-15198251 ( 31) CCTCATTT 1 chr7:123633141-123633221 ( 16) CCTCATTT 1 chr16:81131942-81132022 ( 61) CCTCATTT 1 chr6:41260584-41260664 ( 18) CCTCATTT 1 chr1:247541288-247541368 ( 30) CCTCATTT 1 chr1:244325635-244325715 ( 69) CCTCATTT 1 chr6:17221026-17221106 ( 9) CCTCATTT 1 chr5:121215685-121215765 ( 19) CCTCATTT 1 chr7:67876022-67876102 ( 42) CCTCATTT 1 chr7:16699953-16700033 ( 63) CTCCATAT 1 chr10:89410751-89410831 ( 51) CTCCATAT 1 chr10:21552868-21552948 ( 18) CTCCGTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.73946 E= 2.5e-094 -1305 214 -1305 -1305 -1305 5 -1305 153 -1305 178 -1305 -24 -1305 214 -1305 -1305 182 -1305 -428 -1305 -1305 -1305 -1305 192 -357 125 -1305 72 -1305 -1305 -1305 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 85 E= 2.5e-094 0.000000 1.000000 0.000000 0.000000 0.000000 0.235294 0.000000 0.764706 0.000000 0.776471 0.000000 0.223529 0.000000 1.000000 0.000000 0.000000 0.988235 0.000000 0.011765 0.000000 0.000000 0.000000 0.000000 1.000000 0.023529 0.541176 0.000000 0.435294 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-2 regular expression -------------------------------------------------------------------------------- C[TC][CT]CAT[CT]T -------------------------------------------------------------------------------- Time 8.68 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCTGGTT MEME-3 width = 8 sites = 53 llr = 526 E-value = 1.0e-058 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::1::: pos.-specific C 9:9::::: probability G ::1:9a:: matrix T :a:a::aa bits 2.1 1.9 * * * * 1.7 ** ***** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.3 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCTGGTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:31033535-31033615 66 1.33e-05 gatggagttg ctctggtt caaatgc chr2:46981234-46981314 32 1.33e-05 gatggggttg ctctggtt caaacacctc chr18:71856651-71856731 18 1.33e-05 gatggagttg ctctggtt cacatgcctc chr2:10416256-10416336 42 1.33e-05 gatggagtca ctctggtt tgaatgcctc chr17:75084052-75084132 39 1.33e-05 gatggagttg ctctggtt caaacgcctc chr1:55698978-55699058 20 1.33e-05 gatggagtcg ctctggtt tgaatgcttc chr8:125461688-125461768 60 1.33e-05 gatggagtca ctctggtt tggactcctc chr3:39067336-39067416 26 1.33e-05 gatgaagttt ctctggtt caaacgcttc chr11:67278463-67278543 52 1.33e-05 gatggagttg ctctggtt caaacacctc chr7:29834761-29834841 28 1.33e-05 gatggagttg ctctggtt caaacgcctc chr1:62332829-62332909 52 1.33e-05 gatggagttg ctctggtt ccagcacctc chr12:113154063-11315414 46 1.33e-05 gatggagtca ctctggtt tgaatgcctc chr6:15198171-15198251 67 1.33e-05 gatggagttg ctctggtt caaatg chr17:64730812-64730892 56 1.33e-05 gatggagtca ctctggtt caaatgcctg chr7:123633141-123633221 51 1.33e-05 gatggagtca ctctggtt ccaatgcttc chr3:169745671-169745751 19 1.33e-05 gatggagttg ctctggtt tgaactcccc chr19:51795313-51795393 35 1.33e-05 gatggagtta ctctggtt caaatacctc chr12:119894808-11989488 12 1.33e-05 gatggagttg ctctggtt tatacacctc chr7:156413038-156413118 47 1.33e-05 gatggagttg ctctggtt cacacgcctc chr12:113015449-11301552 25 1.33e-05 gatggagttg ctctggtt caaatgcctc chr6:41260584-41260664 54 1.33e-05 gatggagttg ctctggtt cacacgcctc chr5:107757615-107757695 14 1.33e-05 gatggagtca ctctggtt caaatgcctc chr2:113209052-113209132 40 1.33e-05 tatggagtcg ctctggtt caaacacctc chrX:47668978-47669058 16 1.33e-05 gatggagtta ctctggtt cgaacacctc chr2:68899267-68899347 33 1.33e-05 gatggagtga ctctggtt caaatgcctc chr7:71101002-71101082 66 1.33e-05 gatggagtca ctctggtt caaacgc chrX:140005469-140005549 13 1.33e-05 gatggagtca ctctggtt caaacacctc chr2:205052444-205052524 14 1.33e-05 gatggagttg ctctggtt caaatgcctc chr7:7306011-7306091 9 1.33e-05 atcaactc ctctggtt ctcaggcctt chr10:12486289-12486369 9 1.33e-05 tggagttg ctctggtt caaacgcctc chr9:74569742-74569822 39 1.33e-05 gatggagttg ctctggtt cacacacctc chr3:111199096-111199176 28 1.33e-05 gatggagttg ctctggtt caaatgcctc chr3:31353600-31353680 36 1.33e-05 gatggagtca ctctggtt caaacacctc chr6:17221026-17221106 45 1.33e-05 gatggagtcg ctctggtt caaacgtctc chr5:121215685-121215765 55 1.33e-05 gatggagttg ctctggtt cacaggcctc chr7:137030961-137031041 41 1.33e-05 gatggagtcg ctctggtt taaccacctc chr6:159133029-159133109 59 2.68e-05 gatggagttg ctgtggtt cacatacctc chr15:81062326-81062406 51 2.68e-05 gatggagtcg ctgtggtt tgaatgctct chr8:40983657-40983737 28 2.68e-05 gatggagttg ctgtggtt cacaggtctc chr11:57679171-57679251 5 2.68e-05 gttg ctgtggtt cacacgcctc chr10:26051017-26051097 35 2.68e-05 gatggagttg ctgtggtt catacacctc chr11:28192475-28192555 26 2.68e-05 gatggagtcg ctgtggtt cgaacacctc chr9:131058201-131058281 51 4.31e-05 TAGTGCCCCA CTCTAGTT TTGCTCAGAA chr1:100001499-100001579 42 4.31e-05 gatggagttg ctctagtt caaatgcctc chr11:19110501-19110581 19 4.31e-05 aatggagtca ctctagtt caaacgtttc chr7:107758475-107758555 55 5.86e-05 gatggagttg ttctggtt cacatgcctc chr1:247541288-247541368 64 5.86e-05 gatggagtag ttctggtt cgcatgcct chr1:244321495-244321575 46 7.00e-05 gatggagtca ctctggct caggcctctg chr17:16825860-16825940 26 9.67e-05 gatggagtca gtctggtt caaatgtgtg chr1:12508235-12508315 24 9.67e-05 ggcatcagga ctctgctt ttgagagcct chr10:12487345-12487425 64 1.12e-04 TCAGACTTAG CTTTGGTT CTGCCATTT chr1:16843656-16843736 34 1.43e-04 tgtcagcttt ctcttgtt gtcataattt chr7:140186607-140186687 66 1.43e-04 ttagatctct ctctgttt cagtcat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:31033535-31033615 1.3e-05 65_[+3]_7 chr2:46981234-46981314 1.3e-05 31_[+3]_41 chr18:71856651-71856731 1.3e-05 17_[+3]_55 chr2:10416256-10416336 1.3e-05 41_[+3]_31 chr17:75084052-75084132 1.3e-05 38_[+3]_34 chr1:55698978-55699058 1.3e-05 19_[+3]_53 chr8:125461688-125461768 1.3e-05 59_[+3]_13 chr3:39067336-39067416 1.3e-05 25_[+3]_47 chr11:67278463-67278543 1.3e-05 51_[+3]_21 chr7:29834761-29834841 1.3e-05 27_[+3]_45 chr1:62332829-62332909 1.3e-05 51_[+3]_21 chr12:113154063-11315414 1.3e-05 45_[+3]_27 chr6:15198171-15198251 1.3e-05 66_[+3]_6 chr17:64730812-64730892 1.3e-05 55_[+3]_17 chr7:123633141-123633221 1.3e-05 50_[+3]_22 chr3:169745671-169745751 1.3e-05 18_[+3]_54 chr19:51795313-51795393 1.3e-05 34_[+3]_38 chr12:119894808-11989488 1.3e-05 11_[+3]_61 chr7:156413038-156413118 1.3e-05 46_[+3]_26 chr12:113015449-11301552 1.3e-05 24_[+3]_48 chr6:41260584-41260664 1.3e-05 53_[+3]_19 chr5:107757615-107757695 1.3e-05 13_[+3]_59 chr2:113209052-113209132 1.3e-05 39_[+3]_33 chrX:47668978-47669058 1.3e-05 15_[+3]_57 chr2:68899267-68899347 1.3e-05 32_[+3]_40 chr7:71101002-71101082 1.3e-05 65_[+3]_7 chrX:140005469-140005549 1.3e-05 12_[+3]_60 chr2:205052444-205052524 1.3e-05 13_[+3]_59 chr7:7306011-7306091 1.3e-05 8_[+3]_64 chr10:12486289-12486369 1.3e-05 8_[+3]_64 chr9:74569742-74569822 1.3e-05 38_[+3]_34 chr3:111199096-111199176 1.3e-05 27_[+3]_45 chr3:31353600-31353680 1.3e-05 35_[+3]_37 chr6:17221026-17221106 1.3e-05 44_[+3]_28 chr5:121215685-121215765 1.3e-05 54_[+3]_18 chr7:137030961-137031041 1.3e-05 40_[+3]_32 chr6:159133029-159133109 2.7e-05 58_[+3]_14 chr15:81062326-81062406 2.7e-05 50_[+3]_22 chr8:40983657-40983737 2.7e-05 27_[+3]_45 chr11:57679171-57679251 2.7e-05 4_[+3]_68 chr10:26051017-26051097 2.7e-05 34_[+3]_38 chr11:28192475-28192555 2.7e-05 25_[+3]_47 chr9:131058201-131058281 4.3e-05 50_[+3]_22 chr1:100001499-100001579 4.3e-05 41_[+3]_31 chr11:19110501-19110581 4.3e-05 18_[+3]_54 chr7:107758475-107758555 5.9e-05 54_[+3]_18 chr1:247541288-247541368 5.9e-05 63_[+3]_9 chr1:244321495-244321575 7e-05 45_[+3]_27 chr17:16825860-16825940 9.7e-05 25_[+3]_47 chr1:12508235-12508315 9.7e-05 23_[+3]_49 chr10:12487345-12487425 0.00011 63_[+3]_9 chr1:16843656-16843736 0.00014 33_[+3]_39 chr7:140186607-140186687 0.00014 65_[+3]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCTGGTT width=8 seqs=53 chr16:31033535-31033615 ( 66) CTCTGGTT 1 chr2:46981234-46981314 ( 32) CTCTGGTT 1 chr18:71856651-71856731 ( 18) CTCTGGTT 1 chr2:10416256-10416336 ( 42) CTCTGGTT 1 chr17:75084052-75084132 ( 39) CTCTGGTT 1 chr1:55698978-55699058 ( 20) CTCTGGTT 1 chr8:125461688-125461768 ( 60) CTCTGGTT 1 chr3:39067336-39067416 ( 26) CTCTGGTT 1 chr11:67278463-67278543 ( 52) CTCTGGTT 1 chr7:29834761-29834841 ( 28) CTCTGGTT 1 chr1:62332829-62332909 ( 52) CTCTGGTT 1 chr12:113154063-11315414 ( 46) CTCTGGTT 1 chr6:15198171-15198251 ( 67) CTCTGGTT 1 chr17:64730812-64730892 ( 56) CTCTGGTT 1 chr7:123633141-123633221 ( 51) CTCTGGTT 1 chr3:169745671-169745751 ( 19) CTCTGGTT 1 chr19:51795313-51795393 ( 35) CTCTGGTT 1 chr12:119894808-11989488 ( 12) CTCTGGTT 1 chr7:156413038-156413118 ( 47) CTCTGGTT 1 chr12:113015449-11301552 ( 25) CTCTGGTT 1 chr6:41260584-41260664 ( 54) CTCTGGTT 1 chr5:107757615-107757695 ( 14) CTCTGGTT 1 chr2:113209052-113209132 ( 40) CTCTGGTT 1 chrX:47668978-47669058 ( 16) CTCTGGTT 1 chr2:68899267-68899347 ( 33) CTCTGGTT 1 chr7:71101002-71101082 ( 66) CTCTGGTT 1 chrX:140005469-140005549 ( 13) CTCTGGTT 1 chr2:205052444-205052524 ( 14) CTCTGGTT 1 chr7:7306011-7306091 ( 9) CTCTGGTT 1 chr10:12486289-12486369 ( 9) CTCTGGTT 1 chr9:74569742-74569822 ( 39) CTCTGGTT 1 chr3:111199096-111199176 ( 28) CTCTGGTT 1 chr3:31353600-31353680 ( 36) CTCTGGTT 1 chr6:17221026-17221106 ( 45) CTCTGGTT 1 chr5:121215685-121215765 ( 55) CTCTGGTT 1 chr7:137030961-137031041 ( 41) CTCTGGTT 1 chr6:159133029-159133109 ( 59) CTGTGGTT 1 chr15:81062326-81062406 ( 51) CTGTGGTT 1 chr8:40983657-40983737 ( 28) CTGTGGTT 1 chr11:57679171-57679251 ( 5) CTGTGGTT 1 chr10:26051017-26051097 ( 35) CTGTGGTT 1 chr11:28192475-28192555 ( 26) CTGTGGTT 1 chr9:131058201-131058281 ( 51) CTCTAGTT 1 chr1:100001499-100001579 ( 42) CTCTAGTT 1 chr11:19110501-19110581 ( 19) CTCTAGTT 1 chr7:107758475-107758555 ( 55) TTCTGGTT 1 chr1:247541288-247541368 ( 64) TTCTGGTT 1 chr1:244321495-244321575 ( 46) CTCTGGCT 1 chr17:16825860-16825940 ( 26) GTCTGGTT 1 chr1:12508235-12508315 ( 24) CTCTGCTT 1 chr10:12487345-12487425 ( 64) CTTTGGTT 1 chr1:16843656-16843736 ( 34) CTCTTGTT 1 chr7:140186607-140186687 ( 66) CTCTGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.97483 E= 1.0e-058 -1237 206 -360 -281 -1237 -1237 -1237 192 -1237 194 -101 -381 -1237 -1237 -1237 192 -230 -1237 201 -381 -1237 -358 207 -381 -1237 -358 -1237 189 -1237 -1237 -1237 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 53 E= 1.0e-058 0.000000 0.943396 0.018868 0.037736 0.000000 0.000000 0.000000 1.000000 0.000000 0.867925 0.113208 0.018868 0.000000 0.000000 0.000000 1.000000 0.056604 0.000000 0.924528 0.018868 0.000000 0.018868 0.962264 0.018868 0.000000 0.018868 0.000000 0.981132 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-3 regular expression -------------------------------------------------------------------------------- CTCTGGTT -------------------------------------------------------------------------------- Time 12.14 secs. ******************************************************************************** ******************************************************************************** MOTIF KAMCCAGM MEME-4 width = 8 sites = 71 llr = 609 E-value = 1.9e-049 ******************************************************************************** -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 Description -------------------------------------------------------------------------------- Simplified A 195::a:5 pos.-specific C ::5aa::5 probability G 51::::a: matrix T 5::::::: bits 2.1 ** * 1.9 **** 1.7 **** 1.5 * **** Relative 1.3 * **** Entropy 1.1 ******* (12.4 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TAACCAGA consensus G C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:159133029-159133109 31 2.35e-05 ggcctcattt tacccagc tcctattcaa chr2:10416256-10416336 14 2.35e-05 agccttattt tacccagc cgctattcaa chr17:75084052-75084132 11 2.35e-05 agctttattt tacccagc ccctattcaa chr17:60712082-60712162 55 2.35e-05 agcctcgttt tacccagc cccttttaaa chr7:107758475-107758555 27 2.35e-05 agcctcattt tacccagc tcctattcaa chr15:81062326-81062406 23 2.35e-05 agccttattt tacccagc ccctgttcaa chrX:99866262-99866342 49 2.35e-05 agcctcattt tacccagc tcctattcaa chr11:125143491-12514357 68 2.35e-05 ctgggttcca gacccagc agtca chr11:67278463-67278543 24 2.35e-05 agcctcattt tacccagc tcctattcaa chr1:62332829-62332909 25 2.35e-05 agcctcattt tacccagc gctattcaag chr10:26051017-26051097 7 2.35e-05 tcattt tacccagc ccctattcaa chr12:113154063-11315414 18 2.35e-05 agccttatgt tacccagc ctctacacaa chr6:15198171-15198251 39 2.35e-05 agcctcattt tacccagc tcctattcaa chr7:123633141-123633221 24 2.35e-05 agcctcattt tacccagc cctattcaag chr16:81131942-81132022 69 2.35e-05 agcctcattt tacccagc ccat chr19:51795313-51795393 7 2.35e-05 ttattt tacccagc ccctgttcaa chr7:156413038-156413118 19 2.35e-05 agcctcgttt tacccagc tcctgtttaa chr1:168302912-168302992 31 2.35e-05 agccccattt tacccagc tcctattcaa chr6:41260584-41260664 26 2.35e-05 agcctcattt tacccagc tcctattcaa chr2:113209052-113209132 12 2.35e-05 agcctaattt tacccagc ccctattcaa chr1:247541288-247541368 38 2.35e-05 agcctcattt tacccagc ccattcgaga chr2:68899267-68899347 5 2.35e-05 attt tacccagc ccctattcaa chr7:71101002-71101082 38 2.35e-05 agccttattt tacccagc ccctattcaa chr9:74569742-74569822 11 2.35e-05 agcttcattt tacccagc tcctattcaa chr6:17221026-17221106 17 2.35e-05 cgcctcattt tacccagc ccccattcaa chr5:121215685-121215765 27 2.35e-05 agcctcattt tacccagc tcctattcaa chr7:137030961-137031041 13 2.35e-05 agccttattt tacccagc acctattcaa chr7:67876022-67876102 50 2.35e-05 agcctcattt tacccagc tgttattcac chr6:147788826-147788906 58 8.16e-05 ATTTTAATAG TACCCAGA AGAGGTAAAA chr16:50528572-50528652 42 8.16e-05 agaggcattt gaaccagc ccaactccat chr7:135594161-135594241 25 1.17e-04 caaaagtgct taaccaga gcaactccat chr12:65155111-65155191 24 1.17e-04 agaggcgatt gaaccaga gcaactccat chr20:30093773-30093853 72 1.17e-04 agaggtgctt gaaccaga g chr4:107226753-107226833 7 1.17e-04 gcgtgt gaaccaga gcaactccat chr6:52569701-52569781 57 1.17e-04 agaggtgttt gaaccaga gcaactccat chr1:167130626-167130706 45 1.17e-04 agaggcatgt gaaccaga gtgactccat chr7:92778250-92778330 48 1.17e-04 agagacattc gaaccaga gtgactccat chr1:227038616-227038696 34 1.17e-04 agaggcatgt gaaccaga gcaactccat chr12:32207659-32207739 8 1.17e-04 agcatgt gaaccaga gcaactccat chr4:38319056-38319136 22 1.17e-04 agaagcgttt gaaccaga gcaactccat chr7:28865580-28865660 12 1.17e-04 agaggcatgt gaaccaga gcaactccat chr1:55417631-55417711 71 1.17e-04 agaagcattt gaaccaga gc chr5:43571061-43571141 8 1.17e-04 agcattc gaaccaga gtgactccat chr7:30767745-30767825 23 1.17e-04 agaggtgtgt gaaccaga gcaactccat chrX:6903807-6903887 36 1.17e-04 agaggcatgt gaaccaga gcaactccat chr10:89410751-89410831 39 1.17e-04 agaggcattt gaaccaga gtgactccat chr12:108848510-10884859 8 1.17e-04 ggcgtgt gaaccaga gcaactccat chr4:165972084-165972164 44 1.17e-04 agaggtgtct gaaccaga gcaactccat chr2:125751514-125751594 37 1.17e-04 agaggtgttt taaccaga gcaactccat chr5:85868758-85868838 67 1.17e-04 agaggcatgt gaaccaga gtaact chr2:146611758-146611838 42 1.17e-04 agaggtgttt gaaccaga gtaactccat chr7:7306011-7306091 62 1.17e-04 agaggcattt gaaccaga gtgactccat chr7:54746608-54746688 48 1.17e-04 agaagcgtgt gaaccaga gcaactccat chr19:34096757-34096837 29 1.17e-04 agagtttttt gaaccaga gcaactccat chr3:112868306-112868386 15 1.17e-04 agaggcattt gaaccaga gaaactccat chr11:20222027-20222107 32 1.17e-04 agaggtgtgt gaaccaga gcaactccat chr2:34119619-34119699 71 1.17e-04 agaggtgtat gaaccaga gc chr1:179495880-179495960 45 1.17e-04 agaggtgtct taaccaga gtgactccat chr6:169486240-169486320 28 1.17e-04 agagctgttt gaaccaga gcaactccat chr3:151279749-151279829 32 1.17e-04 agaggcgttt gaaccaga gcaactccat chr17:64730812-64730892 3 1.37e-04 gc ggcccagc agatctcagc chrX:2467531-2467611 56 1.37e-04 agcttcattt tgcccagc ccctattcaa chr6:43893927-43894007 67 1.84e-04 gtgcccggcc tgaccagc tctatc chr6:47384600-47384680 6 1.84e-04 tccta tgcccaga atgatcaaag chr8:18131592-18131672 40 1.84e-04 ctaggctgca tgcccaga aagttaaggc chr8:40983657-40983737 64 2.14e-04 CCACAGACCT GGACCAGA GCTGGGGGC chr11:125431962-12543204 14 2.14e-04 aggccccagt ggaccaga ccaaaccaaa chr8:125461688-125461768 13 2.27e-04 ctgggaatgt aacccagc aggttttgct chr5:54117896-54117976 61 2.80e-04 agaggcattc aaaccaga acaactccat chr19:35166274-35166354 54 2.80e-04 agaggtgttt aaaccaga gcgactccat chr10:17134298-17134378 73 2.80e-04 ataggcattc aaaccaga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:159133029-159133109 2.4e-05 30_[+4]_42 chr2:10416256-10416336 2.4e-05 13_[+4]_59 chr17:75084052-75084132 2.4e-05 10_[+4]_62 chr17:60712082-60712162 2.4e-05 54_[+4]_18 chr7:107758475-107758555 2.4e-05 26_[+4]_46 chr15:81062326-81062406 2.4e-05 22_[+4]_50 chrX:99866262-99866342 2.4e-05 48_[+4]_24 chr11:125143491-12514357 2.4e-05 67_[+4]_5 chr11:67278463-67278543 2.4e-05 23_[+4]_49 chr1:62332829-62332909 2.4e-05 24_[+4]_48 chr10:26051017-26051097 2.4e-05 6_[+4]_66 chr12:113154063-11315414 2.4e-05 17_[+4]_55 chr6:15198171-15198251 2.4e-05 38_[+4]_34 chr7:123633141-123633221 2.4e-05 23_[+4]_49 chr16:81131942-81132022 2.4e-05 68_[+4]_4 chr19:51795313-51795393 2.4e-05 6_[+4]_66 chr7:156413038-156413118 2.4e-05 18_[+4]_54 chr1:168302912-168302992 2.4e-05 30_[+4]_42 chr6:41260584-41260664 2.4e-05 25_[+4]_47 chr2:113209052-113209132 2.4e-05 11_[+4]_61 chr1:247541288-247541368 2.4e-05 37_[+4]_35 chr2:68899267-68899347 2.4e-05 4_[+4]_68 chr7:71101002-71101082 2.4e-05 37_[+4]_35 chr9:74569742-74569822 2.4e-05 10_[+4]_62 chr6:17221026-17221106 2.4e-05 16_[+4]_56 chr5:121215685-121215765 2.4e-05 26_[+4]_46 chr7:137030961-137031041 2.4e-05 12_[+4]_60 chr7:67876022-67876102 2.4e-05 49_[+4]_23 chr6:147788826-147788906 8.2e-05 57_[+4]_15 chr16:50528572-50528652 8.2e-05 41_[+4]_31 chr7:135594161-135594241 0.00012 24_[+4]_48 chr12:65155111-65155191 0.00012 23_[+4]_49 chr20:30093773-30093853 0.00012 71_[+4]_1 chr4:107226753-107226833 0.00012 6_[+4]_66 chr6:52569701-52569781 0.00012 56_[+4]_16 chr1:167130626-167130706 0.00012 44_[+4]_28 chr7:92778250-92778330 0.00012 47_[+4]_25 chr1:227038616-227038696 0.00012 33_[+4]_39 chr12:32207659-32207739 0.00012 7_[+4]_65 chr4:38319056-38319136 0.00012 21_[+4]_51 chr7:28865580-28865660 0.00012 11_[+4]_61 chr1:55417631-55417711 0.00012 70_[+4]_2 chr5:43571061-43571141 0.00012 7_[+4]_65 chr7:30767745-30767825 0.00012 22_[+4]_50 chrX:6903807-6903887 0.00012 35_[+4]_37 chr10:89410751-89410831 0.00012 38_[+4]_34 chr12:108848510-10884859 0.00012 7_[+4]_65 chr4:165972084-165972164 0.00012 43_[+4]_29 chr2:125751514-125751594 0.00012 36_[+4]_36 chr5:85868758-85868838 0.00012 66_[+4]_6 chr2:146611758-146611838 0.00012 41_[+4]_31 chr7:7306011-7306091 0.00012 61_[+4]_11 chr7:54746608-54746688 0.00012 47_[+4]_25 chr19:34096757-34096837 0.00012 28_[+4]_44 chr3:112868306-112868386 0.00012 14_[+4]_58 chr11:20222027-20222107 0.00012 31_[+4]_41 chr2:34119619-34119699 0.00012 70_[+4]_2 chr1:179495880-179495960 0.00012 44_[+4]_28 chr6:169486240-169486320 0.00012 27_[+4]_45 chr3:151279749-151279829 0.00012 31_[+4]_41 chr17:64730812-64730892 0.00014 2_[+4]_70 chrX:2467531-2467611 0.00014 55_[+4]_17 chr6:43893927-43894007 0.00018 66_[+4]_6 chr6:47384600-47384680 0.00018 5_[+4]_67 chr8:18131592-18131672 0.00018 39_[+4]_33 chr8:40983657-40983737 0.00021 63_[+4]_9 chr11:125431962-12543204 0.00021 13_[+4]_59 chr8:125461688-125461768 0.00023 12_[+4]_60 chr5:54117896-54117976 0.00028 60_[+4]_12 chr19:35166274-35166354 0.00028 53_[+4]_19 chr10:17134298-17134378 0.00028 72_[+4] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KAMCCAGM width=8 seqs=71 chr6:159133029-159133109 ( 31) TACCCAGC 1 chr2:10416256-10416336 ( 14) TACCCAGC 1 chr17:75084052-75084132 ( 11) TACCCAGC 1 chr17:60712082-60712162 ( 55) TACCCAGC 1 chr7:107758475-107758555 ( 27) TACCCAGC 1 chr15:81062326-81062406 ( 23) TACCCAGC 1 chrX:99866262-99866342 ( 49) TACCCAGC 1 chr11:125143491-12514357 ( 68) GACCCAGC 1 chr11:67278463-67278543 ( 24) TACCCAGC 1 chr1:62332829-62332909 ( 25) TACCCAGC 1 chr10:26051017-26051097 ( 7) TACCCAGC 1 chr12:113154063-11315414 ( 18) TACCCAGC 1 chr6:15198171-15198251 ( 39) TACCCAGC 1 chr7:123633141-123633221 ( 24) TACCCAGC 1 chr16:81131942-81132022 ( 69) TACCCAGC 1 chr19:51795313-51795393 ( 7) TACCCAGC 1 chr7:156413038-156413118 ( 19) TACCCAGC 1 chr1:168302912-168302992 ( 31) TACCCAGC 1 chr6:41260584-41260664 ( 26) TACCCAGC 1 chr2:113209052-113209132 ( 12) TACCCAGC 1 chr1:247541288-247541368 ( 38) TACCCAGC 1 chr2:68899267-68899347 ( 5) TACCCAGC 1 chr7:71101002-71101082 ( 38) TACCCAGC 1 chr9:74569742-74569822 ( 11) TACCCAGC 1 chr6:17221026-17221106 ( 17) TACCCAGC 1 chr5:121215685-121215765 ( 27) TACCCAGC 1 chr7:137030961-137031041 ( 13) TACCCAGC 1 chr7:67876022-67876102 ( 50) TACCCAGC 1 chr6:147788826-147788906 ( 58) TACCCAGA 1 chr16:50528572-50528652 ( 42) GAACCAGC 1 chr7:135594161-135594241 ( 25) TAACCAGA 1 chr12:65155111-65155191 ( 24) GAACCAGA 1 chr20:30093773-30093853 ( 72) GAACCAGA 1 chr4:107226753-107226833 ( 7) GAACCAGA 1 chr6:52569701-52569781 ( 57) GAACCAGA 1 chr1:167130626-167130706 ( 45) GAACCAGA 1 chr7:92778250-92778330 ( 48) GAACCAGA 1 chr1:227038616-227038696 ( 34) GAACCAGA 1 chr12:32207659-32207739 ( 8) GAACCAGA 1 chr4:38319056-38319136 ( 22) GAACCAGA 1 chr7:28865580-28865660 ( 12) GAACCAGA 1 chr1:55417631-55417711 ( 71) GAACCAGA 1 chr5:43571061-43571141 ( 8) GAACCAGA 1 chr7:30767745-30767825 ( 23) GAACCAGA 1 chrX:6903807-6903887 ( 36) GAACCAGA 1 chr10:89410751-89410831 ( 39) GAACCAGA 1 chr12:108848510-10884859 ( 8) GAACCAGA 1 chr4:165972084-165972164 ( 44) GAACCAGA 1 chr2:125751514-125751594 ( 37) TAACCAGA 1 chr5:85868758-85868838 ( 67) GAACCAGA 1 chr2:146611758-146611838 ( 42) GAACCAGA 1 chr7:7306011-7306091 ( 62) GAACCAGA 1 chr7:54746608-54746688 ( 48) GAACCAGA 1 chr19:34096757-34096837 ( 29) GAACCAGA 1 chr3:112868306-112868386 ( 15) GAACCAGA 1 chr11:20222027-20222107 ( 32) GAACCAGA 1 chr2:34119619-34119699 ( 71) GAACCAGA 1 chr1:179495880-179495960 ( 45) TAACCAGA 1 chr6:169486240-169486320 ( 28) GAACCAGA 1 chr3:151279749-151279829 ( 32) GAACCAGA 1 chr17:64730812-64730892 ( 3) GGCCCAGC 1 chrX:2467531-2467611 ( 56) TGCCCAGC 1 chr6:43893927-43894007 ( 67) TGACCAGC 1 chr6:47384600-47384680 ( 6) TGCCCAGA 1 chr8:18131592-18131672 ( 40) TGCCCAGA 1 chr8:40983657-40983737 ( 64) GGACCAGA 1 chr11:125431962-12543204 ( 14) GGACCAGA 1 chr8:125461688-125461768 ( 13) AACCCAGC 1 chr5:54117896-54117976 ( 61) AAACCAGA 1 chr19:35166274-35166354 ( 54) AAACCAGA 1 chr10:17134298-17134378 ( 73) AAACCAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.28094 E= 1.9e-049 -231 -1279 98 90 169 -1279 -121 -1279 90 108 -1279 -1279 -1279 214 -1279 -1279 -1279 214 -1279 -1279 184 -1279 -1279 -1279 -1279 -1279 213 -1279 94 104 -1279 -1279 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 71 E= 1.9e-049 0.056338 0.000000 0.450704 0.492958 0.901408 0.000000 0.098592 0.000000 0.521127 0.478873 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.535211 0.464789 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KAMCCAGM MEME-4 regular expression -------------------------------------------------------------------------------- [TG]A[AC]CCAG[AC] -------------------------------------------------------------------------------- Time 15.61 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCTGAC MEME-5 width = 8 sites = 43 llr = 420 E-value = 5.7e-039 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::::9: pos.-specific C 99:9:::a probability G :::1:a1: matrix T :1a:a::: bits 2.1 * 1.9 * * 1.7 ****** * 1.5 ****** * Relative 1.3 ******** Entropy 1.1 ******** (14.1 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCTCTGAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr18:71856651-71856731 32 1.20e-05 ggttcacatg cctctgac atctccactg chr6:159133029-159133109 73 1.20e-05 ggttcacata cctctgac chr7:107758475-107758555 69 1.20e-05 ggttcacatg cctctgac aCTT chr11:57679171-57679251 19 1.20e-05 ggttcacacg cctctgac aGAAGGAATG chr11:67278463-67278543 66 1.20e-05 ggttcaaaca cctctgac aCTTCCA chr17:58747239-58747319 54 1.20e-05 agttcaaagg cctctgac aCCACCGTGC chr1:62332829-62332909 66 1.20e-05 ggttccagca cctctgac ataacca chr12:113154063-11315414 60 1.20e-05 ggtttgaatg cctctgac gatggggtac chr4:144284053-144284133 12 1.20e-05 ggttcaaatg cctctgac aCATAGGCAT chr19:51795313-51795393 49 1.20e-05 ggttcaaata cctctgac aATATCGTAG chr12:119894808-11989488 26 1.20e-05 ggtttataca cctctgac aCAAGCAATC chr7:156413038-156413118 61 1.20e-05 ggttcacacg cctctgac aATACTACAA chr12:113015449-11301552 39 1.20e-05 ggttcaaatg cctctgac aCCATCATGC chr6:41260584-41260664 68 1.20e-05 ggttcacacg cctctgac aACTG chr5:107757615-107757695 28 1.20e-05 ggttcaaatg cctctgac aCATGCATGC chr2:113209052-113209132 54 1.20e-05 ggttcaaaca cctctgac aatattactt chrX:47668978-47669058 30 1.20e-05 ggttcgaaca cctctgac aTAttccccc chr2:68899267-68899347 47 1.20e-05 ggttcaaatg cctctgac aagatgaaga chrX:140005469-140005549 27 1.20e-05 ggttcaaaca cctctgac atttcccccc chr10:12486289-12486369 23 1.20e-05 ggttcaaacg cctctgac aGTCAGGCAT chr9:74569742-74569822 53 1.20e-05 ggttcacaca cctctgac aGTTATGCCA chr3:111199096-111199176 42 1.20e-05 ggttcaaatg cctctgac aTAATTATCT chr3:31353600-31353680 50 1.20e-05 ggttcaaaca cctctgac aAAGGCATCA chr5:121215685-121215765 69 1.20e-05 ggttcacagg cctctgac aGAA chr7:137030961-137031041 55 1.20e-05 ggtttaacca cctctgac acctccacaa chr1:244321495-244321575 58 1.20e-05 ctggctcagg cctctgac aGTATTAGTT chr1:100001499-100001579 56 2.17e-05 agttcaaatg cctctggc aGAACTAGCA chr7:29834761-29834841 42 2.17e-05 ggttcaaacg cctctggc aCCCCCACCC chr10:26051017-26051097 49 2.17e-05 ggttcataca cctctggc atgatgaaaa chr10:12488497-12488577 39 3.38e-05 cctgtctcat cctgtgac ttagcatgcc chr1:247535306-247535386 33 3.38e-05 cctatctcat cctgtgac ttagaaagcc chr1:244325635-244325715 17 3.38e-05 cctatttcat cctgtgac atcaaatggc chr1:55698978-55699058 34 4.78e-05 ggtttgaatg cttctgac GCCGTGATTG chr3:39067336-39067416 40 4.78e-05 ggttcaaacg cttctgac aGTTCTATTG chr7:123633141-123633221 65 4.78e-05 ggttccaatg cttctgac aGCAGTAG chr15:81062326-81062406 64 5.98e-05 tggtttgaat gctctgac actcctgag chr19:12993611-12993691 56 5.98e-05 cagtgaaaga gctctgac ctaaccaact chr17:75084052-75084132 53 7.19e-05 ggttcaaacg cctctgaG ACAAGGTCCA chr11:28192475-28192555 40 7.19e-05 ggttcgaaca cctctgaG AAAACTAATC chr2:205052444-205052524 28 8.16e-05 ggttcaaatg cctctgcc aTtaccattg chr2:10416256-10416336 56 1.02e-04 ggtttgaatg cctcggac aCTTTGACCT chr3:169745671-169745751 33 1.02e-04 ggtttgaact cccctgac aaaactgagg chr8:40983657-40983737 42 1.16e-04 ggttcacagg tctctgac aAAGCCACAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:71856651-71856731 1.2e-05 31_[+5]_41 chr6:159133029-159133109 1.2e-05 72_[+5] chr7:107758475-107758555 1.2e-05 68_[+5]_4 chr11:57679171-57679251 1.2e-05 18_[+5]_54 chr11:67278463-67278543 1.2e-05 65_[+5]_7 chr17:58747239-58747319 1.2e-05 53_[+5]_19 chr1:62332829-62332909 1.2e-05 65_[+5]_7 chr12:113154063-11315414 1.2e-05 59_[+5]_13 chr4:144284053-144284133 1.2e-05 11_[+5]_61 chr19:51795313-51795393 1.2e-05 48_[+5]_24 chr12:119894808-11989488 1.2e-05 25_[+5]_47 chr7:156413038-156413118 1.2e-05 60_[+5]_12 chr12:113015449-11301552 1.2e-05 38_[+5]_34 chr6:41260584-41260664 1.2e-05 67_[+5]_5 chr5:107757615-107757695 1.2e-05 27_[+5]_45 chr2:113209052-113209132 1.2e-05 53_[+5]_19 chrX:47668978-47669058 1.2e-05 29_[+5]_43 chr2:68899267-68899347 1.2e-05 46_[+5]_26 chrX:140005469-140005549 1.2e-05 26_[+5]_46 chr10:12486289-12486369 1.2e-05 22_[+5]_50 chr9:74569742-74569822 1.2e-05 52_[+5]_20 chr3:111199096-111199176 1.2e-05 41_[+5]_31 chr3:31353600-31353680 1.2e-05 49_[+5]_23 chr5:121215685-121215765 1.2e-05 68_[+5]_4 chr7:137030961-137031041 1.2e-05 54_[+5]_18 chr1:244321495-244321575 1.2e-05 57_[+5]_15 chr1:100001499-100001579 2.2e-05 55_[+5]_17 chr7:29834761-29834841 2.2e-05 41_[+5]_31 chr10:26051017-26051097 2.2e-05 48_[+5]_24 chr10:12488497-12488577 3.4e-05 38_[+5]_34 chr1:247535306-247535386 3.4e-05 32_[+5]_40 chr1:244325635-244325715 3.4e-05 16_[+5]_56 chr1:55698978-55699058 4.8e-05 33_[+5]_39 chr3:39067336-39067416 4.8e-05 39_[+5]_33 chr7:123633141-123633221 4.8e-05 64_[+5]_8 chr15:81062326-81062406 6e-05 63_[+5]_9 chr19:12993611-12993691 6e-05 55_[+5]_17 chr17:75084052-75084132 7.2e-05 52_[+5]_20 chr11:28192475-28192555 7.2e-05 39_[+5]_33 chr2:205052444-205052524 8.2e-05 27_[+5]_45 chr2:10416256-10416336 0.0001 55_[+5]_17 chr3:169745671-169745751 0.0001 32_[+5]_40 chr8:40983657-40983737 0.00012 41_[+5]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCTGAC width=8 seqs=43 chr18:71856651-71856731 ( 32) CCTCTGAC 1 chr6:159133029-159133109 ( 73) CCTCTGAC 1 chr7:107758475-107758555 ( 69) CCTCTGAC 1 chr11:57679171-57679251 ( 19) CCTCTGAC 1 chr11:67278463-67278543 ( 66) CCTCTGAC 1 chr17:58747239-58747319 ( 54) CCTCTGAC 1 chr1:62332829-62332909 ( 66) CCTCTGAC 1 chr12:113154063-11315414 ( 60) CCTCTGAC 1 chr4:144284053-144284133 ( 12) CCTCTGAC 1 chr19:51795313-51795393 ( 49) CCTCTGAC 1 chr12:119894808-11989488 ( 26) CCTCTGAC 1 chr7:156413038-156413118 ( 61) CCTCTGAC 1 chr12:113015449-11301552 ( 39) CCTCTGAC 1 chr6:41260584-41260664 ( 68) CCTCTGAC 1 chr5:107757615-107757695 ( 28) CCTCTGAC 1 chr2:113209052-113209132 ( 54) CCTCTGAC 1 chrX:47668978-47669058 ( 30) CCTCTGAC 1 chr2:68899267-68899347 ( 47) CCTCTGAC 1 chrX:140005469-140005549 ( 27) CCTCTGAC 1 chr10:12486289-12486369 ( 23) CCTCTGAC 1 chr9:74569742-74569822 ( 53) CCTCTGAC 1 chr3:111199096-111199176 ( 42) CCTCTGAC 1 chr3:31353600-31353680 ( 50) CCTCTGAC 1 chr5:121215685-121215765 ( 69) CCTCTGAC 1 chr7:137030961-137031041 ( 55) CCTCTGAC 1 chr1:244321495-244321575 ( 58) CCTCTGAC 1 chr1:100001499-100001579 ( 56) CCTCTGGC 1 chr7:29834761-29834841 ( 42) CCTCTGGC 1 chr10:26051017-26051097 ( 49) CCTCTGGC 1 chr10:12488497-12488577 ( 39) CCTGTGAC 1 chr1:247535306-247535386 ( 33) CCTGTGAC 1 chr1:244325635-244325715 ( 17) CCTGTGAC 1 chr1:55698978-55699058 ( 34) CTTCTGAC 1 chr3:39067336-39067416 ( 40) CTTCTGAC 1 chr7:123633141-123633221 ( 65) CTTCTGAC 1 chr15:81062326-81062406 ( 64) GCTCTGAC 1 chr19:12993611-12993691 ( 56) GCTCTGAC 1 chr17:75084052-75084132 ( 53) CCTCTGAG 1 chr11:28192475-28192555 ( 40) CCTCTGAG 1 chr2:205052444-205052524 ( 28) CCTCTGCC 1 chr2:10416256-10416336 ( 56) CCTCGGAC 1 chr3:169745671-169745751 ( 33) CCCCTGAC 1 chr8:40983657-40983737 ( 42) TCTCTGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.73438 E= 5.7e-039 -1207 204 -230 -350 -1207 204 -1207 -192 -1207 -328 -1207 188 -1207 204 -171 -1207 -1207 -1207 -330 188 -1207 -1207 213 -1207 170 -328 -171 -1207 -1207 207 -230 -1207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 43 E= 5.7e-039 0.000000 0.930233 0.046512 0.023256 0.000000 0.930233 0.000000 0.069767 0.000000 0.023256 0.000000 0.976744 0.000000 0.930233 0.069767 0.000000 0.000000 0.000000 0.023256 0.976744 0.000000 0.000000 1.000000 0.000000 0.906977 0.023256 0.069767 0.000000 0.000000 0.953488 0.046512 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-5 regular expression -------------------------------------------------------------------------------- CCTCTGAC -------------------------------------------------------------------------------- Time 18.84 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:67876022-67876102 2.95e-05 49_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 5 chr1:244321495-244321575 4.08e-06 35_[+1(1.51e-05)]_2_[+3(7.00e-05)]_\ 4_[+5(1.20e-05)]_15 chr11:59727470-59727550 1.01e-01 80 chr3:151279749-151279829 3.02e-03 43_[+2(1.38e-05)]_29 chr10:42866296-42866376 3.19e-03 3_[+2(3.00e-05)]_69 chr7:137030961-137031041 8.66e-09 12_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_18 chr6:169486240-169486320 3.05e-03 39_[+2(1.38e-05)]_33 chr2:160749605-160749685 3.87e-01 80 chr18:2164810-2164890 6.10e-01 80 chr5:121215685-121215765 6.93e-10 26_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_4 chr3:13692681-13692761 9.98e-01 80 chr11:37880519-37880599 1.26e-03 29_[+2(3.00e-05)]_43 chr6:17221026-17221106 1.16e-08 16_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_28 chr1:179495880-179495960 2.03e-03 56_[+2(1.38e-05)]_16 chr3:31353600-31353680 2.95e-06 25_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 6_[+5(1.20e-05)]_23 chr2:34119619-34119699 1.35e-02 80 chr3:111199096-111199176 5.68e-06 17_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 6_[+5(1.20e-05)]_8_[+3(2.68e-05)]_15 chr11:20222027-20222107 1.87e-03 43_[+2(1.38e-05)]_29 chr9:74569742-74569822 5.40e-10 2_[+2(9.07e-05)]_[+4(2.35e-05)]_10_\ [+1(1.51e-05)]_2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_20 chr7:137944592-137944672 2.96e-02 1_[+2(1.38e-05)]_71 chr2:30475443-30475523 7.34e-01 80 chr10:82727321-82727401 5.68e-01 80 chr10:12486289-12486369 8.35e-05 8_[+3(1.33e-05)]_6_[+5(1.20e-05)]_\ 42_[+5(7.19e-05)] chr3:112868306-112868386 1.09e-03 26_[+2(1.38e-05)]_46 chr19:34096757-34096837 1.66e-03 40_[+2(1.38e-05)]_32 chr8:18131592-18131672 1.55e-01 80 chr12:15077625-15077705 4.04e-03 20_[+2(1.38e-05)]_52 chr16:50528572-50528652 4.00e-04 41_[+4(8.16e-05)]_4_[+2(1.38e-05)]_\ 19 chr7:54746608-54746688 4.65e-03 59_[+2(1.38e-05)]_13 chr19:21880693-21880773 7.43e-02 1_[+1(3.37e-05)]_71 chr11:95343501-95343581 6.53e-03 40_[+2(3.00e-05)]_32 chr11:19110501-19110581 2.37e-04 8_[+1(3.37e-05)]_2_[+3(4.31e-05)]_\ 54 chr8:131674379-131674459 2.85e-01 80 chr8:9885467-9885547 1.76e-01 4_[+2(9.07e-05)]_68 chr4:39033386-39033466 7.54e-01 80 chr11:7102901-7102981 1.71e-01 80 chr7:7306011-7306091 1.21e-03 8_[+3(1.33e-05)]_64 chr7:22749197-22749277 3.76e-01 80 chr2:205052444-205052524 3.70e-05 3_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(8.16e-05)]_45 chr6:31794062-31794142 1.68e-01 80 chr1:95396971-95397051 1.94e-02 20_[+2(1.38e-05)]_52 chr22:17284308-17284388 2.15e-02 7_[+2(1.38e-05)]_65 chr2:146611758-146611838 2.10e-03 53_[+2(1.38e-05)]_19 chrX:140005469-140005549 4.85e-06 2_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(1.20e-05)]_46 chr12:21387516-21387596 4.08e-02 22_[+1(1.51e-05)]_50 chrX:132017528-132017608 2.98e-02 72_[+2(1.38e-05)] chr7:71101002-71101082 1.55e-06 37_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_7 chr5:61601282-61601362 5.71e-01 80 chr6:86082364-86082444 4.06e-01 80 chr1:244325635-244325715 1.42e-03 16_[+5(3.38e-05)]_56 chr2:74531964-74532044 4.32e-01 80 chr7:46500937-46501017 4.46e-01 80 chr1:185310682-185310762 7.66e-03 37_[+2(3.00e-05)]_35 chr22:26121810-26121890 5.16e-01 80 chr2:68899267-68899347 1.18e-08 4_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_26 chr4:185520747-185520827 2.43e-02 68_[+2(1.38e-05)]_4 chr11:28192475-28192555 2.65e-05 15_[+1(1.51e-05)]_2_[+3(2.68e-05)]_\ 6_[+5(7.19e-05)]_33 chr1:247535306-247535386 1.41e-02 32_[+5(3.38e-05)]_40 chr16:65798752-65798832 3.70e-01 80 chr10:17134298-17134378 1.02e-01 80 chrX:47668978-47669058 6.72e-07 5_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(1.20e-05)]_43 chr18:28113811-28113891 4.17e-01 80 chr1:247541288-247541368 2.75e-07 37_[+4(2.35e-05)]_8_[+1(1.51e-05)]_\ 2_[+3(5.86e-05)]_9 chr2:152100092-152100172 1.33e-02 64_[+1(3.37e-05)]_8 chr2:113209052-113209132 2.98e-08 11_[+4(2.35e-05)]_10_[+1(6.36e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_19 chr19:21785094-21785174 5.00e-01 80 chr5:2156579-2156659 6.72e-03 80 chr22:22173383-22173463 5.99e-01 80 chrX:63658087-63658167 1.04e-02 20_[+1(1.51e-05)]_52 chr1:144538853-144538933 3.68e-01 80 chr7:137998685-137998765 4.54e-01 80 chr19:35166274-35166354 1.31e-02 65_[+2(1.38e-05)]_7 chr5:85868758-85868838 8.98e-02 80 chr10:21552868-21552948 1.09e-01 80 chr2:125751514-125751594 4.57e-03 48_[+2(1.38e-05)]_24 chr6:31794324-31794404 3.65e-01 80 chr8:30060513-30060593 1.34e-02 23_[+1(3.37e-05)]_10_[+1(1.51e-05)]_\ 31 chr5:107757615-107757695 2.60e-06 3_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(1.20e-05)]_45 chr7:92314977-92315057 9.65e-01 80 chr1:29211034-29211114 7.24e-01 80 chr4:165972084-165972164 1.04e-03 55_[+2(1.38e-05)]_17 chr4:40241278-40241358 7.40e-02 45_[+2(4.18e-05)]_27 chr1:236667815-236667895 9.68e-03 47_[+2(3.00e-05)]_25 chr19:21803943-21804023 3.60e-02 27_[+1(3.37e-05)]_45 chr6:41260584-41260664 6.93e-10 25_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_5 chr6:100022254-100022334 4.39e-02 17_[+2(3.00e-05)]_55 chr7:138040121-138040201 5.13e-03 27_[+2(5.57e-05)]_45 chr8:29217329-29217409 1.59e-02 4_[+2(1.38e-05)]_68 chr7:64682266-64682346 8.75e-03 9_[+2(3.00e-05)]_63 chr3:42852677-42852757 2.04e-02 66_[+2(3.00e-05)]_6 chr5:29194283-29194363 1.04e-02 60_[+2(3.00e-05)]_12 chr18:9874923-9875003 8.91e-01 80 chr1:168302912-168302992 2.90e-05 22_[+2(5.57e-05)]_[+4(2.35e-05)]_10_\ [+1(1.51e-05)]_24 chr7:138048642-138048722 7.66e-03 32_[+2(3.00e-05)]_40 chr1:38026117-38026197 7.41e-01 80 chr12:108848510-10884859 1.09e-03 19_[+2(1.38e-05)]_53 chr19:21318101-21318181 2.73e-01 80 chr1:247535507-247535587 4.76e-01 80 chr12:113015449-11301552 1.04e-06 14_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 6_[+5(1.20e-05)]_34 chr10:89410751-89410831 3.67e-02 80 chr7:140186607-140186687 2.65e-03 39_[+1(1.51e-05)]_33 chr14:77507549-77507629 4.85e-01 80 chrX:6903807-6903887 5.28e-04 47_[+2(1.38e-05)]_25 chr7:30767745-30767825 6.35e-04 34_[+2(1.38e-05)]_38 chr7:156413038-156413118 1.48e-09 18_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_12 chr7:99432558-99432638 3.04e-02 80 chr8:105679306-105679386 7.49e-01 80 chr12:119894808-11989488 5.85e-07 1_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(1.20e-05)]_47 chr7:149261862-149261942 7.56e-02 35_[+1(3.37e-05)]_37 chr7:99722045-99722125 1.17e-01 80 chr1:67381043-67381123 8.07e-02 19_[+1(1.51e-05)]_53 chr19:51795313-51795393 2.78e-08 6_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_24 chr5:43571061-43571141 3.78e-04 19_[+2(1.38e-05)]_9_[+2(1.38e-05)]_\ 36 chr1:17219532-17219612 4.87e-02 60_[+2(1.38e-05)]_12 chr1:55417631-55417711 1.98e-01 80 chr1:12508235-12508315 3.27e-02 23_[+3(9.67e-05)]_49 chr11:3531025-3531105 9.92e-01 80 chr7:28865580-28865660 2.50e-03 23_[+2(1.38e-05)]_49 chr10:12488497-12488577 3.16e-02 38_[+5(3.38e-05)]_34 chr1:16843656-16843736 5.31e-04 9_[+1(1.51e-05)]_63 chr7:64834872-64834952 4.24e-01 80 chr22:22256059-22256139 1.41e-01 80 chr13:25199574-25199654 1.56e-02 25_[+1(3.37e-05)]_47 chr3:169745671-169745751 2.66e-05 8_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 54 chr5:77074284-77074364 2.02e-01 80 chr4:178325669-178325749 2.89e-02 16_[+1(1.51e-05)]_56 chr5:149322933-149323013 3.82e-02 21_[+1(3.37e-05)]_51 chr2:112337274-112337354 5.47e-01 80 chr3:171695333-171695413 2.10e-01 80 chr16:81131942-81132022 9.50e-04 68_[+4(2.35e-05)]_4 chr1:161527711-161527791 3.37e-02 26_[+2(1.38e-05)]_10_[+2(3.00e-05)]_\ 28 chr8:130091053-130091133 4.02e-01 80 chr7:111199672-111199752 9.97e-01 80 chr11:125431962-12543204 1.06e-02 30_[+1(3.37e-05)]_42 chr11:46264296-46264376 3.20e-02 80 chr4:138889183-138889263 8.71e-01 80 chr22:22199468-22199548 9.64e-01 80 chr4:76755710-76755790 5.33e-03 34_[+2(3.00e-05)]_38 chrX:2467531-2467611 3.18e-03 47_[+2(9.07e-05)]_25 chr21:19062521-19062601 8.39e-03 62_[+2(1.38e-05)]_10 chr4:38319056-38319136 1.09e-03 33_[+2(1.38e-05)]_39 chr7:123633141-123633221 2.33e-09 23_[+4(2.35e-05)]_9_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(4.78e-05)]_8 chr10:116810240-11681032 6.77e-01 80 chr1:16972298-16972378 6.20e-01 80 chr19:12993611-12993691 8.84e-04 55_[+5(5.98e-05)]_8_[+2(1.38e-05)]_\ 1 chr3:9686016-9686096 9.84e-02 67_[+1(1.51e-05)]_5 chr17:64730812-64730892 2.82e-06 45_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 17 chr16:9692706-9692786 8.78e-03 23_[+2(1.38e-05)]_49 chr5:54117896-54117976 5.69e-03 72_[+2(1.38e-05)] chr1:150681685-150681765 3.51e-02 41_[+2(3.00e-05)]_31 chr4:144284053-144284133 8.67e-03 11_[+5(1.20e-05)]_61 chr17:16825860-16825940 3.23e-03 15_[+1(1.51e-05)]_2_[+3(9.67e-05)]_\ 47 chr6:15198171-15198251 5.07e-08 38_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6 chr8:62632973-62633053 2.57e-01 80 chr16:87886829-87886909 3.78e-01 80 chr22:21447703-21447783 7.24e-01 80 chr6:47384600-47384680 3.56e-03 50_[+1(1.51e-05)]_22 chr12:113154063-11315414 3.22e-08 17_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_[+1(4.60e-05)]_5 chr7:138043619-138043699 1.36e-02 38_[+2(1.38e-05)]_34 chr10:26051017-26051097 8.44e-08 6_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(2.68e-05)]_6_[+5(2.17e-05)]_24 chr12:32207659-32207739 1.09e-03 19_[+2(1.38e-05)]_53 chr7:106280305-106280385 4.37e-01 80 chr22:23543778-23543858 3.72e-01 80 chr5:67717463-67717543 8.68e-01 80 chr1:62332829-62332909 6.93e-10 24_[+4(2.35e-05)]_9_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_7 chr7:32579102-32579182 2.24e-04 72_[+1(1.51e-05)] chr7:29834761-29834841 1.32e-06 17_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 6_[+5(2.17e-05)]_31 chr2:205335615-205335695 2.90e-01 80 chr6:31704959-31705039 8.00e-02 80 chr6:24760071-24760151 6.95e-02 31_[+1(3.37e-05)]_41 chr3:128597089-128597169 6.43e-03 20_[+2(1.38e-05)]_52 chr6:43893927-43894007 5.87e-02 80 chr1:100001499-100001579 1.20e-06 31_[+1(1.51e-05)]_2_[+3(4.31e-05)]_\ 6_[+5(2.17e-05)]_17 chr17:58747239-58747319 8.64e-06 29_[+1(1.51e-05)]_16_[+5(1.20e-05)]_\ 19 chr10:125701701-12570178 8.63e-01 80 chr19:21794582-21794662 8.08e-01 80 chr11:67278463-67278543 6.93e-10 23_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(1.20e-05)]_7 chr7:137625785-137625865 3.92e-01 80 chr1:227038616-227038696 3.03e-04 45_[+2(1.38e-05)]_27 chr2:196686410-196686490 6.81e-02 67_[+1(1.51e-05)]_5 chr3:39067336-39067416 1.52e-05 15_[+1(8.21e-05)]_2_[+3(1.33e-05)]_\ 6_[+5(4.78e-05)]_33 chr1:142886528-142886608 9.60e-02 61_[+1(3.37e-05)]_11 chr6:36852554-36852634 9.85e-02 5_[+1(3.37e-05)]_67 chr3:21557081-21557161 1.59e-02 24_[+2(1.38e-05)]_48 chr7:92778250-92778330 2.90e-03 59_[+2(3.00e-05)]_13 chr11:57679171-57679251 4.04e-04 4_[+3(2.68e-05)]_6_[+5(1.20e-05)]_\ 54 chr1:167130626-167130706 7.60e-04 56_[+2(1.38e-05)]_16 chr7:30801530-30801610 1.48e-02 9_[+2(3.00e-05)]_63 chr1:68388954-68389034 2.62e-01 80 chr8:40983657-40983737 1.80e-06 17_[+1(1.51e-05)]_2_[+3(2.68e-05)]_\ 45 chr1:213897768-213897848 4.73e-01 80 chr2:13191688-13191768 1.45e-01 80 chr6:52569701-52569781 3.72e-03 68_[+2(1.38e-05)]_4 chr6:147788826-147788906 5.41e-02 57_[+4(8.16e-05)]_15 chr4:107226753-107226833 2.12e-03 18_[+2(1.38e-05)]_54 chr8:125461688-125461768 5.05e-05 49_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 13 chr1:207917671-207917751 5.40e-02 5_[+1(3.37e-05)]_67 chr9:139684092-139684172 1.75e-02 67_[+1(3.37e-05)]_5 chr6:110908675-110908755 1.60e-02 24_[+1(3.37e-05)]_48 chr11:125143491-12514357 3.46e-02 67_[+4(2.35e-05)]_5 chrX:99866262-99866342 3.86e-05 48_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 6 chr22:19668391-19668471 8.32e-01 80 chr16:28550730-28550810 6.85e-03 44_[+1(3.37e-05)]_28 chr1:156663736-156663816 3.04e-01 80 chr15:81062326-81062406 6.31e-08 22_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(2.68e-05)]_5_[+5(5.98e-05)]_9 chr4:185263484-185263564 4.72e-02 23_[+1(3.37e-05)]_49 chr7:16699953-16700033 7.71e-02 80 chr10:4909335-4909415 7.60e-02 42_[+1(1.51e-05)]_30 chr20:30093773-30093853 1.42e-01 80 chr12:65155111-65155191 2.22e-03 35_[+2(1.38e-05)]_37 chr7:106485181-106485261 2.07e-02 69_[+1(1.51e-05)]_3 chr17:61510137-61510217 3.89e-01 80 chr19:52464343-52464423 4.03e-02 71_[+1(3.37e-05)]_1 chr7:107758475-107758555 2.53e-09 26_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(5.86e-05)]_6_[+5(1.20e-05)]_4 chr17:25435117-25435197 3.69e-02 56_[+1(1.51e-05)]_16 chr19:50877529-50877609 4.76e-01 80 chr1:55698978-55699058 2.17e-06 9_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(4.78e-05)]_39 chr17:60712082-60712162 4.28e-05 54_[+4(2.35e-05)]_10_[+1(1.51e-05)] chr6:37396483-37396563 4.66e-01 80 chr20:46236953-46237033 1.83e-01 80 chr4:8244721-8244801 1.08e-03 48_[+2(1.38e-05)]_24 chr9:131058201-131058281 4.55e-02 50_[+3(4.31e-05)]_22 chr20:46237270-46237350 7.60e-02 80 chr3:39363818-39363898 1.20e-01 80 chr7:22864502-22864582 2.12e-02 62_[+1(1.51e-05)]_10 chr16:48333598-48333678 7.62e-01 80 chr17:75084052-75084132 3.45e-08 10_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_6_[+5(7.19e-05)]_20 chr1:53101510-53101590 3.28e-03 54_[+1(1.51e-05)]_18 chr10:104215047-10421512 2.29e-01 80 chr10:72434169-72434249 2.22e-01 80 chr9:99994433-99994513 7.85e-03 50_[+2(3.00e-05)]_22 chr17:15430280-15430360 1.06e-01 36_[+1(3.37e-05)]_36 chr5:95043464-95043544 1.19e-02 3_[+1(1.51e-05)]_69 chr2:10416256-10416336 4.73e-08 13_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(1.33e-05)]_31 chr10:12487345-12487425 1.19e-02 80 chr6:158174112-158174192 2.85e-02 28_[+1(3.37e-05)]_44 chr1:116820572-116820652 6.20e-02 12_[+2(3.00e-05)]_60 chr20:353282-353362 6.83e-02 11_[+2(4.18e-05)]_61 chr6:159133029-159133109 1.28e-09 30_[+4(2.35e-05)]_10_[+1(1.51e-05)]_\ 2_[+3(2.68e-05)]_6_[+5(1.20e-05)] chr18:71856651-71856731 1.81e-06 7_[+1(1.51e-05)]_2_[+3(1.33e-05)]_6_\ [+5(1.20e-05)]_41 chrX:3488833-3488913 2.00e-02 43_[+2(1.38e-05)]_29 chr1:12510019-12510099 9.42e-01 80 chr1:22231139-22231219 5.26e-01 80 chr2:46981234-46981314 5.16e-05 21_[+1(4.60e-05)]_2_[+3(1.33e-05)]_\ 41 chr1:147734071-147734151 4.69e-01 80 chr2:62518311-62518391 7.71e-01 80 chr19:21793723-21793803 5.56e-01 80 chr16:31033535-31033615 1.35e-06 55_[+1(1.51e-05)]_2_[+3(1.33e-05)]_\ 7 chr15:34628810-34628890 5.12e-01 80 chr7:135594161-135594241 1.09e-03 36_[+2(1.38e-05)]_36 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n05.farnam.hpc.yale.internal ********************************************************************************