******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF354B.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr18:32444939-32445019 1.0000 80 chr7:71333868-71333948 1.0000 80 chr1:210055104-210055184 1.0000 80 chr10:603911-603991 1.0000 80 chr2:111849366-111849446 1.0000 80 chr8:17644774-17644854 1.0000 80 chr7:154384144-154384224 1.0000 80 chr4:40424035-40424115 1.0000 80 chr4:164788144-164788224 1.0000 80 chr9:119094550-119094630 1.0000 80 chr16:9704735-9704815 1.0000 80 chr22:22724482-22724562 1.0000 80 chr1:208005292-208005372 1.0000 80 chr13:66917831-66917911 1.0000 80 chr4:109191692-109191772 1.0000 80 chr5:2131568-2131648 1.0000 80 chr20:56769472-56769552 1.0000 80 chr16:54988143-54988223 1.0000 80 chr2:99872113-99872193 1.0000 80 chr14:66512879-66512959 1.0000 80 chr2:217982429-217982509 1.0000 80 chr6:16045596-16045676 1.0000 80 chr2:132090459-132090539 1.0000 80 chr1:5747162-5747242 1.0000 80 chr4:190624309-190624389 1.0000 80 chr4:24807240-24807320 1.0000 80 chr10:133622538-13362261 1.0000 80 chr10:7069356-7069436 1.0000 80 chr16:16177744-16177824 1.0000 80 chr15:57324037-57324117 1.0000 80 chr7:1462616-1462696 1.0000 80 chr2:109622378-109622458 1.0000 80 chr16:57720681-57720761 1.0000 80 chr18:2516564-2516644 1.0000 80 chr14:51886572-51886652 1.0000 80 chr2:2864503-2864583 1.0000 80 chr1:95835803-95835883 1.0000 80 chr10:125542188-12554226 1.0000 80 chr2:81694321-81694401 1.0000 80 chr8:64082609-64082689 1.0000 80 chr16:27993676-27993756 1.0000 80 chr5:159228455-159228535 1.0000 80 chr7:139233493-139233573 1.0000 80 chr18:10291042-10291122 1.0000 80 chr14:68940691-68940771 1.0000 80 chr13:113695707-11369578 1.0000 80 chr20:54738980-54739060 1.0000 80 chr7:57271316-57271396 1.0000 80 chr8:72760924-72761004 1.0000 80 chr10:21823772-21823852 1.0000 80 chr10:29518325-29518405 1.0000 80 chrX:14139428-14139508 1.0000 80 chr10:23670460-23670540 1.0000 80 chr20:1878391-1878471 1.0000 80 chr2:160001395-160001475 1.0000 80 chr12:95822413-95822493 1.0000 80 chr20:56769679-56769759 1.0000 80 chr14:49892062-49892142 1.0000 80 chr1:116417316-116417396 1.0000 80 chr3:33271607-33271687 1.0000 80 chr6:28936393-28936473 1.0000 80 chr1:8357460-8357540 1.0000 80 chr7:51397716-51397796 1.0000 80 chr13:37439676-37439756 1.0000 80 chr19:16546853-16546933 1.0000 80 chr2:178260464-178260544 1.0000 80 chr7:65965218-65965298 1.0000 80 chr3:46277096-46277176 1.0000 80 chr14:102414959-10241503 1.0000 80 chr12:108440108-10844018 1.0000 80 chr2:103291524-103291604 1.0000 80 chr6:160582752-160582832 1.0000 80 chr16:83864116-83864196 1.0000 80 chr1:28485949-28486029 1.0000 80 chr2:61614901-61614981 1.0000 80 chr10:51827661-51827741 1.0000 80 chr19:34096742-34096822 1.0000 80 chr1:5747423-5747503 1.0000 80 chr3:182666271-182666351 1.0000 80 chr18:9798197-9798277 1.0000 80 chr13:112829644-11282972 1.0000 80 chr20:44740002-44740082 1.0000 80 chr19:47855503-47855583 1.0000 80 chr20:46944249-46944329 1.0000 80 chr15:72929268-72929348 1.0000 80 chr5:147700334-147700414 1.0000 80 chr16:69556952-69557032 1.0000 80 chr10:6913185-6913265 1.0000 80 chr19:34012341-34012421 1.0000 80 chrX:101975567-101975647 1.0000 80 chr2:20386469-20386549 1.0000 80 chr7:2353925-2354005 1.0000 80 chr10:81055535-81055615 1.0000 80 chr15:25018203-25018283 1.0000 80 chr17:44268266-44268346 1.0000 80 chr15:68936631-68936711 1.0000 80 chr14:89498647-89498727 1.0000 80 chr16:19567154-19567234 1.0000 80 chr15:60593350-60593430 1.0000 80 chr2:20386675-20386755 1.0000 80 chr18:61536717-61536797 1.0000 80 chr6:138657494-138657574 1.0000 80 chr2:102437644-102437724 1.0000 80 chr1:231578626-231578706 1.0000 80 chr5:77995832-77995912 1.0000 80 chr1:156265408-156265488 1.0000 80 chr17:6396421-6396501 1.0000 80 chr4:10497404-10497484 1.0000 80 chr6:16045804-16045884 1.0000 80 chr15:25123450-25123530 1.0000 80 chr4:7754531-7754611 1.0000 80 chr12:116202172-11620225 1.0000 80 chr8:123737313-123737393 1.0000 80 chr15:74392524-74392604 1.0000 80 chr1:223486587-223486667 1.0000 80 chr17:26684908-26684988 1.0000 80 chr7:93787376-93787456 1.0000 80 chr6:42228520-42228600 1.0000 80 chr12:114178655-11417873 1.0000 80 chr11:1785064-1785144 1.0000 80 chr22:22492693-22492773 1.0000 80 chr11:14095875-14095955 1.0000 80 chr22:24335987-24336067 1.0000 80 chr1:155189458-155189538 1.0000 80 chr20:10299461-10299541 1.0000 80 chr20:52127295-52127375 1.0000 80 chr12:115575890-11557597 1.0000 80 chr7:65643434-65643514 1.0000 80 chr18:5369638-5369718 1.0000 80 chr13:20693418-20693498 1.0000 80 chr13:50159668-50159748 1.0000 80 chr5:158763775-158763855 1.0000 80 chr15:20569048-20569128 1.0000 80 chrX:101914821-101914901 1.0000 80 chr1:155880842-155880922 1.0000 80 chr7:151453257-151453337 1.0000 80 chr17:66470697-66470777 1.0000 80 chr19:51497494-51497574 1.0000 80 chr1:86078745-86078825 1.0000 80 chr19:7137344-7137424 1.0000 80 chr1:223552277-223552357 1.0000 80 chr1:213860584-213860664 1.0000 80 chr14:51886771-51886851 1.0000 80 chr5:121215714-121215794 1.0000 80 chr9:99226934-99227014 1.0000 80 chr22:19559068-19559148 1.0000 80 chr1:212719465-212719545 1.0000 80 chr1:9138519-9138599 1.0000 80 chr16:8561514-8561594 1.0000 80 chr15:72929467-72929547 1.0000 80 chr1:15288358-15288438 1.0000 80 chr5:62072603-62072683 1.0000 80 chr7:100292100-100292180 1.0000 80 chr15:57864167-57864247 1.0000 80 chr1:155188787-155188867 1.0000 80 chr2:127075625-127075705 1.0000 80 chr10:129741212-12974129 1.0000 80 chr1:30337721-30337801 1.0000 80 chr14:68283250-68283330 1.0000 80 chr16:29125918-29125998 1.0000 80 chr2:178117420-178117500 1.0000 80 chr15:58637103-58637183 1.0000 80 chr5:168447271-168447351 1.0000 80 chr19:34012587-34012667 1.0000 80 chr6:164361875-164361955 1.0000 80 chr1:142806830-142806910 1.0000 80 chr6:158653084-158653164 1.0000 80 chr16:13228864-13228944 1.0000 80 chr12:131678806-13167888 1.0000 80 chr16:23508768-23508848 1.0000 80 chr19:11487932-11488012 1.0000 80 chr11:93140512-93140592 1.0000 80 chr2:220043170-220043250 1.0000 80 chr4:117303976-117304056 1.0000 80 chr1:175379925-175380005 1.0000 80 chr21:45253474-45253554 1.0000 80 chr1:229178043-229178123 1.0000 80 chr3:125919553-125919633 1.0000 80 chr7:28865523-28865603 1.0000 80 chr15:81062331-81062411 1.0000 80 chr22:31002851-31002931 1.0000 80 chr15:64364433-64364513 1.0000 80 chr13:92048413-92048493 1.0000 80 chr9:136015357-136015437 1.0000 80 chr8:143392024-143392104 1.0000 80 chr22:22572136-22572216 1.0000 80 chr17:3539949-3540029 1.0000 80 chrX:55744188-55744268 1.0000 80 chr1:181141421-181141501 1.0000 80 chr2:26925048-26925128 1.0000 80 chr5:173130619-173130699 1.0000 80 chr19:7587744-7587824 1.0000 80 chrX:129086700-129086780 1.0000 80 chr17:38753010-38753090 1.0000 80 chr3:165371063-165371143 1.0000 80 chr1:211421386-211421466 1.0000 80 chr17:1627961-1628041 1.0000 80 chr16:88923765-88923845 1.0000 80 chr12:22865167-22865247 1.0000 80 chr11:66774068-66774148 1.0000 80 chr15:78645392-78645472 1.0000 80 chr13:81299418-81299498 1.0000 80 chr12:110704367-11070444 1.0000 80 chr3:5020796-5020876 1.0000 80 chr22:22414523-22414603 1.0000 80 chr12:113172870-11317295 1.0000 80 chr12:114184988-11418506 1.0000 80 chr1:89636335-89636415 1.0000 80 chr1:30337924-30338004 1.0000 80 chr1:224646941-224647021 1.0000 80 chr8:40983671-40983751 1.0000 80 chr11:63725692-63725772 1.0000 80 chr12:113853991-11385407 1.0000 80 chr18:20806961-20807041 1.0000 80 chr9:130955202-130955282 1.0000 80 chr17:78075374-78075454 1.0000 80 chr22:21964194-21964274 1.0000 80 chr8:9885488-9885568 1.0000 80 chr7:129864116-129864196 1.0000 80 chr13:93256591-93256671 1.0000 80 chr16:46722926-46723006 1.0000 80 chr12:2986271-2986351 1.0000 80 chr2:146611790-146611870 1.0000 80 chr11:44422141-44422221 1.0000 80 chr16:9704942-9705022 1.0000 80 chr2:43449133-43449213 1.0000 80 chr1:197659370-197659450 1.0000 80 chr1:236687828-236687908 1.0000 80 chr10:125701691-12570177 1.0000 80 chr6:42228725-42228805 1.0000 80 chr17:42422382-42422462 1.0000 80 chr13:92319193-92319273 1.0000 80 chr7:102988436-102988516 1.0000 80 chr7:25967379-25967459 1.0000 80 chr1:33768081-33768161 1.0000 80 chr12:53645873-53645953 1.0000 80 chr11:67231911-67231991 1.0000 80 chr2:220042971-220043051 1.0000 80 chr1:155211038-155211118 1.0000 80 chr15:99408785-99408865 1.0000 80 chr4:25109742-25109822 1.0000 80 chr21:11032567-11032647 1.0000 80 chr11:6640509-6640589 1.0000 80 chr2:152683373-152683453 1.0000 80 chr16:5083865-5083945 1.0000 80 chr17:27253744-27253824 1.0000 80 chr7:25683544-25683624 1.0000 80 chr10:32217845-32217925 1.0000 80 chrX:153209930-153210010 1.0000 80 chr7:71101044-71101124 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF354B/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF354B.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.248 C 0.248 G 0.259 T 0.245 Background letter frequencies (from file dataset with add-one prior applied): A 0.248 C 0.248 G 0.259 T 0.246 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TCACRTGA MEME-1 width = 8 sites = 137 llr = 1191 E-value = 9.8e-167 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a:5::8 pos.-specific C 1a:7:::: probability G ::::5:a1 matrix T 9::2:a:: bits 2.0 ** ** 1.8 ** ** 1.6 ** ** 1.4 *** ** Relative 1.2 *** *** Entropy 1.0 **** *** (12.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCACGTGA consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:25683544-25683624 67 3.01e-05 GTCAGCTCTG TCACATGA CTTTCA chr2:152683373-152683453 52 3.01e-05 TCTTTCGGTA TCACGTGA CCTACACATC chr1:155211038-155211118 43 3.01e-05 ACTAGGAGCG TCACATGA CACAGGAAGT chr12:53645873-53645953 4 3.01e-05 CCG TCACGTGA TGAAGCCATC chr17:42422382-42422462 65 3.01e-05 TGTCCCGACG TCACATGA TTCTCCAA chr1:197659370-197659450 44 3.01e-05 ACTGCACTGC TCACATGA TTATCTTGAG chr17:1627961-1628041 21 3.01e-05 GCTGGGGCGA TCACGTGA CCCGCGTCAG chr17:38753010-38753090 49 3.01e-05 GGAGGGTAGG TCACAtga atcaatgcct chr5:173130619-173130699 72 3.01e-05 ggcagtgagt tcacgtga g chr2:26925048-26925128 34 3.01e-05 cctcacatCC TCACATGA CAGAGAGAGA chr11:93140512-93140592 56 3.01e-05 cactgtatga tcacatga tgaaatcagc chr16:13228864-13228944 44 3.01e-05 ccaaagcaag tcacatga ctcaccttgc chr1:30337721-30337801 3 3.01e-05 TG TCACATGA CTGCTGCAGC chr1:155188787-155188867 56 3.01e-05 ACTAGGAGAG TCACATGA CACAGGAAGT chr7:100292100-100292180 43 3.01e-05 GCCCGGCTGG TCACGTGA CGGGGGCCCC chr5:62072603-62072683 22 3.01e-05 CACGTGACAG TCACATGA TTTCTGCAGT chr19:7137344-7137424 14 3.01e-05 GCACTGGATG TCACATGA CCTCAGTCTA chr19:51497494-51497574 70 3.01e-05 atgtttcata tcacatga ctc chr13:50159668-50159748 69 3.01e-05 CCCGGCCGCC TCACGTGA CCCG chr13:20693418-20693498 47 3.01e-05 GGACCGAGTG TCACGTGA GTGAGCTGGA chr20:52127295-52127375 55 3.01e-05 GCAGTTGCAG TCACATGA GCTGTTGCAA chr1:155189458-155189538 24 3.01e-05 CCTCGGAGAG TCACATGA CACAGGCAGT chr12:114178655-11417873 36 3.01e-05 ggaggcaggg tcacatga caccaacatg chr4:10497404-10497484 69 3.01e-05 gaggagaagg tcacgtga tcat chr17:6396421-6396501 24 3.01e-05 CCAAGATCAG TCACATGA CCAAAGGCTA chr1:156265408-156265488 67 3.01e-05 TGCCAGAGGG TCACATGA CTCGCG chr6:138657494-138657574 48 3.01e-05 AGCTGACCTG TCACGTGA CCGACATCAG chr17:44268266-44268346 27 3.01e-05 ACTGCACATA TCACATGA CATGATGTAA chr10:6913185-6913265 65 3.01e-05 CTGTTTACGA TCACATGA TCCGTGAA chr5:147700334-147700414 55 3.01e-05 cattcgcggt tcacgtga tcattcgcgg chr15:72929268-72929348 47 3.01e-05 TTAGTCCAAG TCACGTGA TCGTCGACTC chr20:46944249-46944329 50 3.01e-05 GAGGGCAGAG TCACATGA CCCAGTCCAG chr19:47855503-47855583 30 3.01e-05 gacgtgtgtg tcACATGA GAGATCATGT chr13:112829644-11282972 46 3.01e-05 AGGAAGGAGG TCACGTGA Agacacagac chr3:182666271-182666351 49 3.01e-05 ACTACACTTA TCACATGA CAGAGAACTA chr12:108440108-10844018 25 3.01e-05 gaggctgtgg tcacgtga tgtagaacaa chr7:65965218-65965298 67 3.01e-05 tcagttcctg tcacatga gcctcc chr19:16546853-16546933 50 3.01e-05 GACTCCTCAG TCACATGA CATATCTTCA chr6:28936393-28936473 57 3.01e-05 tggtcagagg tcacatga tctgtgactt chr3:33271607-33271687 20 3.01e-05 ACACTTGCTG TCACGTGA TGATCACAAG chr14:49892062-49892142 20 3.01e-05 CCCAACAGCA TCACATGA GCCTATCATG chr12:95822413-95822493 12 3.01e-05 tacgcagaga tcacatga tgagagagga chrX:14139428-14139508 21 3.01e-05 aatgaagtct tcacgtga ttcaggagtc chr7:57271316-57271396 71 3.01e-05 GACGCACATG TCACGTGA TG chr20:54738980-54739060 53 3.01e-05 tttacctcca tcacgtga caaggtggtc chr14:68940691-68940771 38 3.01e-05 gatacacagg tcacatga tacacaggcc chr5:159228455-159228535 46 3.01e-05 cagggctggg tcacatga ctaccTGGGC chr16:27993676-27993756 45 3.01e-05 gagcagtggg tcacgtga ctagttcctg chr2:81694321-81694401 10 3.01e-05 GCGGCTCTG TCACGTGA CACTCAAGTG chr14:51886572-51886652 3 3.01e-05 AG TCACGTGA CTTCCTGCCC chr2:109622378-109622458 59 3.01e-05 agcacagagg tcacatga gccagtgggt chr16:16177744-16177824 54 3.01e-05 acctttgtgg tcacatga ctgcagagtc chr4:190624309-190624389 51 3.01e-05 tgatcacacg tcacatga ccaggaacat chr1:5747162-5747242 13 3.01e-05 GACAAGGCAG TCACATGA CTAGGAAAAC chr2:132090459-132090539 20 3.01e-05 TTCTCTGCGA TCACGTGA TAAGTTAGTC chr6:16045596-16045676 31 3.01e-05 GTTAGCTGGG TCACATGA Ttctcatctt chr2:99872113-99872193 41 3.01e-05 AACCACTATG TCACATGA TCATGATAGG chr5:2131568-2131648 30 3.01e-05 CGTCCCATGA TCACATGA CACAGGAGCC chr22:22724482-22724562 38 3.01e-05 GATGTGGAGA TCACATGA TCAGACATGC chr16:9704735-9704815 37 3.01e-05 GGCAGCTAAG TCAcatga tttagtgaaa chr4:164788144-164788224 32 3.01e-05 gaatcatcac tcacatga ctcagtctcc chr4:40424035-40424115 14 3.01e-05 GCCCAGTGAA TCACATGA TCATAGTCAT chr8:17644774-17644854 56 3.01e-05 gacagacagg tcacatga cagtcacatt chr10:603911-603991 26 3.01e-05 CAGGGTGCCG TCACATGA CAGGGCGGAC chr1:210055104-210055184 64 3.01e-05 cacatgacaa tcacatga ctttgtcat chr4:25109742-25109822 37 5.99e-05 ctgccacttg tcatgtga tcttaggcac chr1:236687828-236687908 47 5.99e-05 AAAGCGCAAG TCATGTGA CTTCCTTTGA chr11:44422141-44422221 52 5.99e-05 tcaggaatgg tcatgtga ttcaggctgg chr12:114184988-11418506 7 5.99e-05 AGCTGG TCATGTGA CCACGGGGTC chr1:211421386-211421466 69 5.99e-05 attagatgga tcatgtga ctag chr8:143392024-143392104 53 5.99e-05 cctttaaaaa tcatgtga cttttttctc chr21:45253474-45253554 58 5.99e-05 catggagttg tcatgtga cacagcaatt chr1:175379925-175380005 59 5.99e-05 tgagaacatg tcatgtga gaaataatct chr19:11487932-11488012 71 5.99e-05 gtgactgggg tcatgtga ct chr12:131678806-13167888 49 5.99e-05 ccgaatccca tcatgtga cccaggctca chr5:168447271-168447351 39 5.99e-05 ttggtcctga tcatgtga ctgagttcca chr22:19559068-19559148 50 5.99e-05 CTGAAAGCAG TCATGTGA TCTGTGTTGA chr9:99226934-99227014 23 5.99e-05 gccaggagtg tcatatga cactggggtc chr7:151453257-151453337 55 5.99e-05 CACGTACAGG TCATGTGA GCAATGCCCC chrX:101914821-101914901 42 5.99e-05 TGACGGTGGG TCATGTGA CCAGGCTCTG chr20:10299461-10299541 32 5.99e-05 gagaagttgg tcatgtga cacaaaacat chr11:14095875-14095955 67 5.99e-05 GGGTCTGGGA TCATGTGA CACATG chr6:42228520-42228600 1 5.99e-05 . TCATGTGA CCATCTGCCT chr2:102437644-102437724 38 5.99e-05 CTGTATTGGG TCATGTGA CTGTTGCCGT chr15:60593350-60593430 68 5.99e-05 cctgggctag tcatgtga ccagg chrX:101975567-101975647 56 5.99e-05 TGACGGTGGG TCATGTGA CCAGGCTCTG chr20:44740002-44740082 53 5.99e-05 ggggctgaag tcatatga ggcttgactg chr1:28485949-28486029 18 5.99e-05 tgtgatcaga tcatgtga tcacagggag chr20:1878391-1878471 10 5.99e-05 TGGGGCCAA TCATGTGA ATTATCCTGG chr18:2516564-2516644 6 5.99e-05 TGTTC TCATGTGA CAATTTGGGG chr16:57720681-57720761 6 5.99e-05 cagaa tcatgtga taTGATGTCC chr7:1462616-1462696 64 5.99e-05 AGCTGATGGG TCATGTGA CACAGGGGT chr4:24807240-24807320 60 5.99e-05 tgtgacatca tcatgtga caaggtctca chr4:109191692-109191772 66 5.99e-05 cactctcttg tcatgtga tgccttc chr11:63725692-63725772 1 9.13e-05 . TCACATGG CCAGTTTCCC chr16:23508768-23508848 8 9.13e-05 ATTTATG TCACGTGG AAGTCATGTG chr16:29125918-29125998 47 9.13e-05 TTGAGTGTCA TCACGTGG GCTTGGGTCC chr10:129741212-12974129 38 9.13e-05 GCAATTTTAA TCACGTGG GCCAGGAAAC chr1:223552277-223552357 18 9.13e-05 cataatgagg tcacatgg ccaactagtc chr18:5369638-5369718 60 9.13e-05 gtgagctgca tcacatgg tcatagtcac chr5:77995832-77995912 12 9.13e-05 CAGCCTCAGG TCACATGG GTGAGTGTTC chr2:178260464-178260544 63 9.13e-05 GGTTGTTTTA TCACATGG TTGGTTATAT chr2:160001395-160001475 60 9.13e-05 AACTTCGAGG TCACATGG TGATAGGTCA chr8:72760924-72761004 61 9.13e-05 GGCATGCTAG TCACATGG GGAGCCAGTC chr13:113695707-11369578 15 9.13e-05 GGGCGGGGAA TCACGTGG CCCTGCCCTC chr15:57324037-57324117 30 9.13e-05 tcccaggcaa tcacatgg taatgacatc chr10:133622538-13362261 50 9.13e-05 ccaaggcaag tcacatgg ccctactgcc chr20:56769472-56769552 31 9.13e-05 ccaaagtaag tcacatgg caaaacctaa chr2:43449133-43449213 65 1.22e-04 GCTACCGCAG CCACATGA TCCACTCA chr12:22865167-22865247 73 1.22e-04 GACTCGTCAT CCACGTGA chr5:158763775-158763855 42 1.22e-04 Gattttggtg ccacgtga cttagataca chr4:7754531-7754611 27 1.22e-04 ACCACCAGAC CCACGTGA CACGCCCATC chr18:61536717-61536797 58 1.22e-04 TGCCATTTTG CCACATGA CACAGCAGTC chr18:10291042-10291122 47 1.22e-04 GCTGACTGGC CCACGTGA TCGGTGCCTG chr2:217982429-217982509 20 1.22e-04 CTGAGATTGG CCACATGA CTTCCTGTCT chr9:119094550-119094630 13 1.22e-04 TGCCTCCCCA CCACATGA CTGAGTGCAC chr18:32444939-32445019 56 1.22e-04 GTGATCAGTG CCACATGA TCATCCTGCC chr8:123737313-123737393 70 1.36e-04 CCTAGAGCAA TCACCTGA CTG chr15:25123450-25123530 70 1.36e-04 TACGGGAAGG TCACCTGA CAG chr10:81055535-81055615 42 1.36e-04 GCCGTGAGGG TCACCTGA TTTTCCAGAC chr18:9798197-9798277 41 1.36e-04 GGCTATGTGG TCACCTGA TCTCCCCAGC chr16:5083865-5083945 70 1.67e-04 GGGCCTCGGG TCATGTGG GCT chr15:20569048-20569128 7 1.97e-04 ccatgg ccatgtga ttctgctttg chr10:7069356-7069436 21 1.97e-04 CGCCAGAAAA CCATGTGA TATACAAACC chr1:208005292-208005372 7 1.97e-04 TTAGCA CCATGTGA CTTAAAAATG chr17:3539949-3540029 50 2.29e-04 GTGGCGGAGG TCAGGTGA CAGCGGACCC chr15:58637103-58637183 63 2.29e-04 actagaaatg tcaggtga tggtttggca chr14:68283250-68283330 56 2.29e-04 TTGAGCCGAG TCAGGTGA CAGAACCCAC chr12:113853991-11385407 33 2.61e-04 ctcctgcagt gcacatga ctgccgctca chr2:2864503-2864583 66 2.61e-04 gatagagtga gcacgtga CAGTAAA chr1:223486587-223486667 22 3.07e-04 ttgagtccaa ccacgtgg ctgatgagtt chr16:83864116-83864196 17 3.07e-04 CTGAAGGTGG CCACGTGG TGAGGCAGGC chr10:29518325-29518405 38 3.07e-04 GGTCAGTTGA CCACGTGG AGAGGAGGCT chr12:116202172-11620225 14 3.37e-04 GTGGCAACAA TCACGTGT GACAtgggtc chr1:5747423-5747503 49 3.37e-04 catgcctact tcacatgt ggctaagaag chr7:28865523-28865603 63 3.98e-04 CTtgtcagag gcatgtga accagagcaa chr22:22572136-22572216 8 4.92e-04 tttaaat tcaggtgg tacatgtgca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:25683544-25683624 3e-05 66_[+1]_6 chr2:152683373-152683453 3e-05 51_[+1]_21 chr1:155211038-155211118 3e-05 42_[+1]_30 chr12:53645873-53645953 3e-05 3_[+1]_69 chr17:42422382-42422462 3e-05 64_[+1]_8 chr1:197659370-197659450 3e-05 43_[+1]_29 chr17:1627961-1628041 3e-05 20_[+1]_52 chr17:38753010-38753090 3e-05 48_[+1]_24 chr5:173130619-173130699 3e-05 71_[+1]_1 chr2:26925048-26925128 3e-05 33_[+1]_39 chr11:93140512-93140592 3e-05 55_[+1]_17 chr16:13228864-13228944 3e-05 43_[+1]_29 chr1:30337721-30337801 3e-05 2_[+1]_70 chr1:155188787-155188867 3e-05 55_[+1]_17 chr7:100292100-100292180 3e-05 42_[+1]_30 chr5:62072603-62072683 3e-05 21_[+1]_51 chr19:7137344-7137424 3e-05 13_[+1]_59 chr19:51497494-51497574 3e-05 69_[+1]_3 chr13:50159668-50159748 3e-05 68_[+1]_4 chr13:20693418-20693498 3e-05 46_[+1]_26 chr20:52127295-52127375 3e-05 54_[+1]_18 chr1:155189458-155189538 3e-05 23_[+1]_49 chr12:114178655-11417873 3e-05 35_[+1]_37 chr4:10497404-10497484 3e-05 68_[+1]_4 chr17:6396421-6396501 3e-05 23_[+1]_49 chr1:156265408-156265488 3e-05 66_[+1]_6 chr6:138657494-138657574 3e-05 47_[+1]_25 chr17:44268266-44268346 3e-05 26_[+1]_46 chr10:6913185-6913265 3e-05 64_[+1]_8 chr5:147700334-147700414 3e-05 54_[+1]_18 chr15:72929268-72929348 3e-05 46_[+1]_26 chr20:46944249-46944329 3e-05 49_[+1]_23 chr19:47855503-47855583 3e-05 29_[+1]_43 chr13:112829644-11282972 3e-05 45_[+1]_27 chr3:182666271-182666351 3e-05 48_[+1]_24 chr12:108440108-10844018 3e-05 24_[+1]_48 chr7:65965218-65965298 3e-05 66_[+1]_6 chr19:16546853-16546933 3e-05 49_[+1]_23 chr6:28936393-28936473 3e-05 56_[+1]_16 chr3:33271607-33271687 3e-05 19_[+1]_53 chr14:49892062-49892142 3e-05 19_[+1]_53 chr12:95822413-95822493 3e-05 11_[+1]_61 chrX:14139428-14139508 3e-05 20_[+1]_52 chr7:57271316-57271396 3e-05 70_[+1]_2 chr20:54738980-54739060 3e-05 52_[+1]_20 chr14:68940691-68940771 3e-05 37_[+1]_35 chr5:159228455-159228535 3e-05 45_[+1]_27 chr16:27993676-27993756 3e-05 44_[+1]_28 chr2:81694321-81694401 3e-05 9_[+1]_63 chr14:51886572-51886652 3e-05 2_[+1]_70 chr2:109622378-109622458 3e-05 58_[+1]_14 chr16:16177744-16177824 3e-05 53_[+1]_19 chr4:190624309-190624389 3e-05 50_[+1]_22 chr1:5747162-5747242 3e-05 12_[+1]_60 chr2:132090459-132090539 3e-05 19_[+1]_53 chr6:16045596-16045676 3e-05 30_[+1]_42 chr2:99872113-99872193 3e-05 40_[+1]_32 chr5:2131568-2131648 3e-05 29_[+1]_43 chr22:22724482-22724562 3e-05 37_[+1]_35 chr16:9704735-9704815 3e-05 36_[+1]_36 chr4:164788144-164788224 3e-05 31_[+1]_41 chr4:40424035-40424115 3e-05 13_[+1]_59 chr8:17644774-17644854 3e-05 55_[+1]_17 chr10:603911-603991 3e-05 25_[+1]_47 chr1:210055104-210055184 3e-05 63_[+1]_9 chr4:25109742-25109822 6e-05 36_[+1]_36 chr1:236687828-236687908 6e-05 46_[+1]_26 chr11:44422141-44422221 6e-05 51_[+1]_21 chr12:114184988-11418506 6e-05 6_[+1]_66 chr1:211421386-211421466 6e-05 68_[+1]_4 chr8:143392024-143392104 6e-05 52_[+1]_20 chr21:45253474-45253554 6e-05 57_[+1]_15 chr1:175379925-175380005 6e-05 58_[+1]_14 chr19:11487932-11488012 6e-05 70_[+1]_2 chr12:131678806-13167888 6e-05 48_[+1]_24 chr5:168447271-168447351 6e-05 38_[+1]_34 chr22:19559068-19559148 6e-05 49_[+1]_23 chr9:99226934-99227014 6e-05 22_[+1]_50 chr7:151453257-151453337 6e-05 54_[+1]_18 chrX:101914821-101914901 6e-05 41_[+1]_31 chr20:10299461-10299541 6e-05 31_[+1]_41 chr11:14095875-14095955 6e-05 66_[+1]_6 chr6:42228520-42228600 6e-05 [+1]_72 chr2:102437644-102437724 6e-05 37_[+1]_35 chr15:60593350-60593430 6e-05 67_[+1]_5 chrX:101975567-101975647 6e-05 55_[+1]_17 chr20:44740002-44740082 6e-05 52_[+1]_20 chr1:28485949-28486029 6e-05 17_[+1]_55 chr20:1878391-1878471 6e-05 9_[+1]_63 chr18:2516564-2516644 6e-05 5_[+1]_67 chr16:57720681-57720761 6e-05 5_[+1]_67 chr7:1462616-1462696 6e-05 63_[+1]_9 chr4:24807240-24807320 6e-05 59_[+1]_13 chr4:109191692-109191772 6e-05 65_[+1]_7 chr11:63725692-63725772 9.1e-05 [+1]_72 chr16:23508768-23508848 9.1e-05 7_[+1]_65 chr16:29125918-29125998 9.1e-05 46_[+1]_26 chr10:129741212-12974129 9.1e-05 37_[+1]_35 chr1:223552277-223552357 9.1e-05 17_[+1]_55 chr18:5369638-5369718 9.1e-05 59_[+1]_13 chr5:77995832-77995912 9.1e-05 11_[+1]_61 chr2:178260464-178260544 9.1e-05 62_[+1]_10 chr2:160001395-160001475 9.1e-05 59_[+1]_13 chr8:72760924-72761004 9.1e-05 60_[+1]_12 chr13:113695707-11369578 9.1e-05 14_[+1]_58 chr15:57324037-57324117 9.1e-05 29_[+1]_43 chr10:133622538-13362261 9.1e-05 49_[+1]_23 chr20:56769472-56769552 9.1e-05 30_[+1]_42 chr2:43449133-43449213 0.00012 64_[+1]_8 chr12:22865167-22865247 0.00012 72_[+1] chr5:158763775-158763855 0.00012 41_[+1]_31 chr4:7754531-7754611 0.00012 26_[+1]_46 chr18:61536717-61536797 0.00012 57_[+1]_15 chr18:10291042-10291122 0.00012 46_[+1]_26 chr2:217982429-217982509 0.00012 19_[+1]_53 chr9:119094550-119094630 0.00012 12_[+1]_60 chr18:32444939-32445019 0.00012 55_[+1]_17 chr8:123737313-123737393 0.00014 69_[+1]_3 chr15:25123450-25123530 0.00014 69_[+1]_3 chr10:81055535-81055615 0.00014 41_[+1]_31 chr18:9798197-9798277 0.00014 40_[+1]_32 chr16:5083865-5083945 0.00017 69_[+1]_3 chr15:20569048-20569128 0.0002 6_[+1]_66 chr10:7069356-7069436 0.0002 20_[+1]_52 chr1:208005292-208005372 0.0002 6_[+1]_66 chr17:3539949-3540029 0.00023 49_[+1]_23 chr15:58637103-58637183 0.00023 62_[+1]_10 chr14:68283250-68283330 0.00023 55_[+1]_17 chr12:113853991-11385407 0.00026 32_[+1]_40 chr2:2864503-2864583 0.00026 65_[+1]_7 chr1:223486587-223486667 0.00031 21_[+1]_51 chr16:83864116-83864196 0.00031 16_[+1]_56 chr10:29518325-29518405 0.00031 37_[+1]_35 chr12:116202172-11620225 0.00034 13_[+1]_59 chr1:5747423-5747503 0.00034 48_[+1]_24 chr7:28865523-28865603 0.0004 62_[+1]_10 chr22:22572136-22572216 0.00049 7_[+1]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCACRTGA width=8 seqs=137 chr7:25683544-25683624 ( 67) TCACATGA 1 chr2:152683373-152683453 ( 52) TCACGTGA 1 chr1:155211038-155211118 ( 43) TCACATGA 1 chr12:53645873-53645953 ( 4) TCACGTGA 1 chr17:42422382-42422462 ( 65) TCACATGA 1 chr1:197659370-197659450 ( 44) TCACATGA 1 chr17:1627961-1628041 ( 21) TCACGTGA 1 chr17:38753010-38753090 ( 49) TCACATGA 1 chr5:173130619-173130699 ( 72) TCACGTGA 1 chr2:26925048-26925128 ( 34) TCACATGA 1 chr11:93140512-93140592 ( 56) TCACATGA 1 chr16:13228864-13228944 ( 44) TCACATGA 1 chr1:30337721-30337801 ( 3) TCACATGA 1 chr1:155188787-155188867 ( 56) TCACATGA 1 chr7:100292100-100292180 ( 43) TCACGTGA 1 chr5:62072603-62072683 ( 22) TCACATGA 1 chr19:7137344-7137424 ( 14) TCACATGA 1 chr19:51497494-51497574 ( 70) TCACATGA 1 chr13:50159668-50159748 ( 69) TCACGTGA 1 chr13:20693418-20693498 ( 47) TCACGTGA 1 chr20:52127295-52127375 ( 55) TCACATGA 1 chr1:155189458-155189538 ( 24) TCACATGA 1 chr12:114178655-11417873 ( 36) TCACATGA 1 chr4:10497404-10497484 ( 69) TCACGTGA 1 chr17:6396421-6396501 ( 24) TCACATGA 1 chr1:156265408-156265488 ( 67) TCACATGA 1 chr6:138657494-138657574 ( 48) TCACGTGA 1 chr17:44268266-44268346 ( 27) TCACATGA 1 chr10:6913185-6913265 ( 65) TCACATGA 1 chr5:147700334-147700414 ( 55) TCACGTGA 1 chr15:72929268-72929348 ( 47) TCACGTGA 1 chr20:46944249-46944329 ( 50) TCACATGA 1 chr19:47855503-47855583 ( 30) TCACATGA 1 chr13:112829644-11282972 ( 46) TCACGTGA 1 chr3:182666271-182666351 ( 49) TCACATGA 1 chr12:108440108-10844018 ( 25) TCACGTGA 1 chr7:65965218-65965298 ( 67) TCACATGA 1 chr19:16546853-16546933 ( 50) TCACATGA 1 chr6:28936393-28936473 ( 57) TCACATGA 1 chr3:33271607-33271687 ( 20) TCACGTGA 1 chr14:49892062-49892142 ( 20) TCACATGA 1 chr12:95822413-95822493 ( 12) TCACATGA 1 chrX:14139428-14139508 ( 21) TCACGTGA 1 chr7:57271316-57271396 ( 71) TCACGTGA 1 chr20:54738980-54739060 ( 53) TCACGTGA 1 chr14:68940691-68940771 ( 38) TCACATGA 1 chr5:159228455-159228535 ( 46) TCACATGA 1 chr16:27993676-27993756 ( 45) TCACGTGA 1 chr2:81694321-81694401 ( 10) TCACGTGA 1 chr14:51886572-51886652 ( 3) TCACGTGA 1 chr2:109622378-109622458 ( 59) TCACATGA 1 chr16:16177744-16177824 ( 54) TCACATGA 1 chr4:190624309-190624389 ( 51) TCACATGA 1 chr1:5747162-5747242 ( 13) TCACATGA 1 chr2:132090459-132090539 ( 20) TCACGTGA 1 chr6:16045596-16045676 ( 31) TCACATGA 1 chr2:99872113-99872193 ( 41) TCACATGA 1 chr5:2131568-2131648 ( 30) TCACATGA 1 chr22:22724482-22724562 ( 38) TCACATGA 1 chr16:9704735-9704815 ( 37) TCACATGA 1 chr4:164788144-164788224 ( 32) TCACATGA 1 chr4:40424035-40424115 ( 14) TCACATGA 1 chr8:17644774-17644854 ( 56) TCACATGA 1 chr10:603911-603991 ( 26) TCACATGA 1 chr1:210055104-210055184 ( 64) TCACATGA 1 chr4:25109742-25109822 ( 37) TCATGTGA 1 chr1:236687828-236687908 ( 47) TCATGTGA 1 chr11:44422141-44422221 ( 52) TCATGTGA 1 chr12:114184988-11418506 ( 7) TCATGTGA 1 chr1:211421386-211421466 ( 69) TCATGTGA 1 chr8:143392024-143392104 ( 53) TCATGTGA 1 chr21:45253474-45253554 ( 58) TCATGTGA 1 chr1:175379925-175380005 ( 59) TCATGTGA 1 chr19:11487932-11488012 ( 71) TCATGTGA 1 chr12:131678806-13167888 ( 49) TCATGTGA 1 chr5:168447271-168447351 ( 39) TCATGTGA 1 chr22:19559068-19559148 ( 50) TCATGTGA 1 chr9:99226934-99227014 ( 23) TCATATGA 1 chr7:151453257-151453337 ( 55) TCATGTGA 1 chrX:101914821-101914901 ( 42) TCATGTGA 1 chr20:10299461-10299541 ( 32) TCATGTGA 1 chr11:14095875-14095955 ( 67) TCATGTGA 1 chr6:42228520-42228600 ( 1) TCATGTGA 1 chr2:102437644-102437724 ( 38) TCATGTGA 1 chr15:60593350-60593430 ( 68) TCATGTGA 1 chrX:101975567-101975647 ( 56) TCATGTGA 1 chr20:44740002-44740082 ( 53) TCATATGA 1 chr1:28485949-28486029 ( 18) TCATGTGA 1 chr20:1878391-1878471 ( 10) TCATGTGA 1 chr18:2516564-2516644 ( 6) TCATGTGA 1 chr16:57720681-57720761 ( 6) TCATGTGA 1 chr7:1462616-1462696 ( 64) TCATGTGA 1 chr4:24807240-24807320 ( 60) TCATGTGA 1 chr4:109191692-109191772 ( 66) TCATGTGA 1 chr11:63725692-63725772 ( 1) TCACATGG 1 chr16:23508768-23508848 ( 8) TCACGTGG 1 chr16:29125918-29125998 ( 47) TCACGTGG 1 chr10:129741212-12974129 ( 38) TCACGTGG 1 chr1:223552277-223552357 ( 18) TCACATGG 1 chr18:5369638-5369718 ( 60) TCACATGG 1 chr5:77995832-77995912 ( 12) TCACATGG 1 chr2:178260464-178260544 ( 63) TCACATGG 1 chr2:160001395-160001475 ( 60) TCACATGG 1 chr8:72760924-72761004 ( 61) TCACATGG 1 chr13:113695707-11369578 ( 15) TCACGTGG 1 chr15:57324037-57324117 ( 30) TCACATGG 1 chr10:133622538-13362261 ( 50) TCACATGG 1 chr20:56769472-56769552 ( 31) TCACATGG 1 chr2:43449133-43449213 ( 65) CCACATGA 1 chr12:22865167-22865247 ( 73) CCACGTGA 1 chr5:158763775-158763855 ( 42) CCACGTGA 1 chr4:7754531-7754611 ( 27) CCACGTGA 1 chr18:61536717-61536797 ( 58) CCACATGA 1 chr18:10291042-10291122 ( 47) CCACGTGA 1 chr2:217982429-217982509 ( 20) CCACATGA 1 chr9:119094550-119094630 ( 13) CCACATGA 1 chr18:32444939-32445019 ( 56) CCACATGA 1 chr8:123737313-123737393 ( 70) TCACCTGA 1 chr15:25123450-25123530 ( 70) TCACCTGA 1 chr10:81055535-81055615 ( 42) TCACCTGA 1 chr18:9798197-9798277 ( 41) TCACCTGA 1 chr16:5083865-5083945 ( 70) TCATGTGG 1 chr15:20569048-20569128 ( 7) CCATGTGA 1 chr10:7069356-7069436 ( 21) CCATGTGA 1 chr1:208005292-208005372 ( 7) CCATGTGA 1 chr17:3539949-3540029 ( 50) TCAGGTGA 1 chr15:58637103-58637183 ( 63) TCAGGTGA 1 chr14:68283250-68283330 ( 56) TCAGGTGA 1 chr12:113853991-11385407 ( 33) GCACATGA 1 chr2:2864503-2864583 ( 66) GCACGTGA 1 chr1:223486587-223486667 ( 22) CCACGTGG 1 chr16:83864116-83864196 ( 17) CCACGTGG 1 chr10:29518325-29518405 ( 38) CCACGTGG 1 chr12:116202172-11620225 ( 14) TCACGTGT 1 chr1:5747423-5747503 ( 49) TCACATGT 1 chr7:28865523-28865603 ( 63) GCATGTGA 1 chr22:22572136-22572216 ( 8) TCAGGTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.85292 E= 9.8e-167 -1374 -118 -356 182 -1374 201 -1374 -1374 201 -1374 -1374 -1374 -1374 155 -315 2 89 -308 98 -1374 -1374 -1374 -1374 203 -1374 -1374 195 -1374 177 -1374 -90 -407 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 137 E= 9.8e-167 0.000000 0.109489 0.021898 0.868613 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.722628 0.029197 0.248175 0.459854 0.029197 0.510949 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.846715 0.000000 0.138686 0.014599 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACRTGA MEME-1 regular expression -------------------------------------------------------------------------------- TCA[CT][GA]TGA -------------------------------------------------------------------------------- Time 4.68 secs. ******************************************************************************** ******************************************************************************** MOTIF CAYRTGAC MEME-2 width = 8 sites = 59 llr = 497 E-value = 4.4e-029 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a:4::7: pos.-specific C a:5:::17 probability G :::6:a2: matrix T ::5:a::3 bits 2.0 ** ** 1.8 ** ** 1.6 ** ** 1.4 ** ** Relative 1.2 ** ** * Entropy 1.0 ******** (12.2 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CACGTGAC consensus TA GT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:100292100-100292180 19 1.55e-05 CCCGCCCCGA CACGTGAC CTGGGCGCCC chr5:62072603-62072683 12 1.55e-05 TATTTTCCAG CACGTGAC AGTCACATGA chr4:10497404-10497484 34 1.55e-05 aggagaaggt cacgtgac catagagaga chr11:63725692-63725772 18 3.08e-05 GCCAGTTTCC CATGTGAC AGAATTCTGC chr12:22865167-22865247 58 3.08e-05 CTTATGCATC CATGTGAC TCGTCATCCA chr19:11487932-11488012 58 3.08e-05 cctggccttt catgtgac tggggtcatg chr12:131678806-13167888 31 3.08e-05 tcaggcccct catgtgac ccgaatccca chr15:20569048-20569128 27 3.08e-05 ctgctttggc catgtgac atacctcctc chr6:42228520-42228600 25 3.08e-05 GCCTCCAGGC CATGTGAC CTGCCCCATG chr7:65965218-65965298 34 3.08e-05 atggctcact catgtgac tgctgaccgg chr20:54738980-54739060 70 3.08e-05 acaaggtggt catgtgac tca chr14:51886572-51886652 35 3.08e-05 TAGGTACAGT CATGTGAC TTCCTGCCCT chr10:7069356-7069436 38 3.08e-05 ATATACAAAC CATGTGAC CAGGATTACA chr4:24807240-24807320 48 3.08e-05 aagacattgc catgtgac atcatcatgt chr9:119094550-119094630 30 3.08e-05 ACTGAGTGCA CATGTGAC CCTCCTACGT chr4:40424035-40424115 38 3.08e-05 TCATTCTCCT CATGTGAC ACGCTATTGG chr8:17644774-17644854 41 3.08e-05 tagacagtcc catgtgac agacaggtca chr4:25109742-25109822 52 4.57e-05 tgatcttagg cacatgac ttcatctttc chr15:64364433-64364513 1 4.57e-05 . CACATGAC CATTAACCCC chr16:13228864-13228944 3 4.57e-05 gt cacatgac TCAGCTTGCT chr4:7754531-7754611 11 4.57e-05 GAGGCTGCAG CACATGAC CACCAGACCC chr3:182666271-182666351 26 4.57e-05 CTACACTTAT CACATGAC AGAGAACTAC chr3:33271607-33271687 4 4.57e-05 CAT CACATGAC ACTTGCTGTC chr16:57720681-57720761 23 4.57e-05 ataTGATGTC CACATGAC ATGGATGGGA chr16:16177744-16177824 71 4.57e-05 actgcagagt cacatgac ag chr10:133622538-13362261 67 4.57e-05 gccctactgc cacatgac acttgt chr5:2131568-2131648 65 4.57e-05 GTGTGGTGGA CACATGAC ACACAGGA chr10:603911-603991 43 4.57e-05 ACAGGGCGGA CACATGAC AGAATTATAA chr1:210055104-210055184 54 4.57e-05 tctgaacaat cacatgac aatcacatga chrX:55744188-55744268 1 7.57e-05 . CACGTGAT CCTGGCCTGC chr5:158763775-158763855 27 7.57e-05 ACTTTGGTGC CACGTGat tttggtgcca chr5:147700334-147700414 37 7.57e-05 attcgcggtt cacgtgat cattcgcggt chr14:68940691-68940771 55 7.57e-05 atacacaggc cacgtgat acacaggtca chr2:2864503-2864583 51 7.57e-05 atagagtgaa cacgtgat agagtgagca chr1:155211038-155211118 24 9.10e-05 GTGGATGGGT CATGTGAT GACTAGGAGC chr1:155188787-155188867 37 9.10e-05 GTGGATGGGT CATGTGAT GACTAGGAGA chr19:47855503-47855583 43 9.10e-05 CATGAGAGAT CATGTGAT CATGGCCGTC chr1:28485949-28486029 6 9.10e-05 aatct catgtgat cagatcatgt chr14:49892062-49892142 34 9.10e-05 ATGAGCCTAT CATGTGAT GATATCACGT chr18:32444939-32445019 43 9.10e-05 ACAGTCAGCC CATGTGAT CAGTGCCACA chr13:50159668-50159748 51 1.22e-04 CCCGCCGGGT CACGTGGC CCCGGCCGCC chr8:72760924-72761004 46 1.22e-04 GTGTGTTGGC CACGTGGC ATGCTAGTCA chr4:190624309-190624389 37 1.22e-04 atctccacat cacatgat cacacgtcac chr2:132090459-132090539 37 1.22e-04 ATAAGTTAGT CACATGAT TGGGATTTTA chr2:99872113-99872193 19 1.22e-04 ACCAGTATGT CACATGAT CTCAAACCAC chr5:173130619-173130699 57 1.52e-04 tcttgctcac catgtggc agtgagttca chr10:81055535-81055615 26 1.52e-04 CACAGGATGT CATGTGGC CGTGAGGGTC chr18:9798197-9798277 26 1.52e-04 GACTGATATC CATGTGGC TATGTGGTCA chr13:113695707-11369578 57 1.52e-04 TATGGGGGAT CATGTGGC CCTGCCCCCG chr12:114184988-11418506 24 1.68e-04 ACCACGGGGT CACATGGC CCAGAGCTGG chr11:14095875-14095955 40 1.68e-04 GATCCATGCA CACATGGC CCCATTCCTG chr5:159228455-159228535 69 1.68e-04 TGGGCTATTG CACATGGC CACA chr16:9704735-9704815 22 1.68e-04 TCGGGTAAAT CACATGGC AGCTAAGTCA chr6:28936393-28936473 43 2.15e-04 gctcaggagt catgtggt cagaggtcac chr1:223552277-223552357 35 2.31e-04 gccaactagt cacatggt ctcacataag chr2:178260464-178260544 48 2.31e-04 ATTGTTTTAT CACATGGT TGTTTTATCA chr17:6396421-6396501 7 2.77e-04 CTAGGT CATGTGCC CAAGATCAGT chr15:60593350-60593430 46 2.77e-04 ttatgtgagt catgtgcc cattcctggg chr7:51397716-51397796 23 2.91e-04 ctctctggtt cacatgcc tatgacaGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:100292100-100292180 1.5e-05 18_[+2]_54 chr5:62072603-62072683 1.5e-05 11_[+2]_61 chr4:10497404-10497484 1.5e-05 33_[+2]_39 chr11:63725692-63725772 3.1e-05 17_[+2]_55 chr12:22865167-22865247 3.1e-05 57_[+2]_15 chr19:11487932-11488012 3.1e-05 57_[+2]_15 chr12:131678806-13167888 3.1e-05 30_[+2]_42 chr15:20569048-20569128 3.1e-05 26_[+2]_46 chr6:42228520-42228600 3.1e-05 24_[+2]_48 chr7:65965218-65965298 3.1e-05 33_[+2]_39 chr20:54738980-54739060 3.1e-05 69_[+2]_3 chr14:51886572-51886652 3.1e-05 34_[+2]_38 chr10:7069356-7069436 3.1e-05 37_[+2]_35 chr4:24807240-24807320 3.1e-05 47_[+2]_25 chr9:119094550-119094630 3.1e-05 29_[+2]_43 chr4:40424035-40424115 3.1e-05 37_[+2]_35 chr8:17644774-17644854 3.1e-05 40_[+2]_32 chr4:25109742-25109822 4.6e-05 51_[+2]_21 chr15:64364433-64364513 4.6e-05 [+2]_72 chr16:13228864-13228944 4.6e-05 2_[+2]_70 chr4:7754531-7754611 4.6e-05 10_[+2]_62 chr3:182666271-182666351 4.6e-05 25_[+2]_47 chr3:33271607-33271687 4.6e-05 3_[+2]_69 chr16:57720681-57720761 4.6e-05 22_[+2]_50 chr16:16177744-16177824 4.6e-05 70_[+2]_2 chr10:133622538-13362261 4.6e-05 66_[+2]_6 chr5:2131568-2131648 4.6e-05 64_[+2]_8 chr10:603911-603991 4.6e-05 42_[+2]_30 chr1:210055104-210055184 4.6e-05 53_[+2]_19 chrX:55744188-55744268 7.6e-05 [+2]_72 chr5:158763775-158763855 7.6e-05 26_[+2]_46 chr5:147700334-147700414 7.6e-05 36_[+2]_36 chr14:68940691-68940771 7.6e-05 54_[+2]_18 chr2:2864503-2864583 7.6e-05 50_[+2]_22 chr1:155211038-155211118 9.1e-05 23_[+2]_49 chr1:155188787-155188867 9.1e-05 36_[+2]_36 chr19:47855503-47855583 9.1e-05 42_[+2]_30 chr1:28485949-28486029 9.1e-05 5_[+2]_67 chr14:49892062-49892142 9.1e-05 33_[+2]_39 chr18:32444939-32445019 9.1e-05 42_[+2]_30 chr13:50159668-50159748 0.00012 50_[+2]_22 chr8:72760924-72761004 0.00012 45_[+2]_27 chr4:190624309-190624389 0.00012 36_[+2]_36 chr2:132090459-132090539 0.00012 36_[+2]_36 chr2:99872113-99872193 0.00012 18_[+2]_54 chr5:173130619-173130699 0.00015 56_[+2]_16 chr10:81055535-81055615 0.00015 25_[+2]_47 chr18:9798197-9798277 0.00015 25_[+2]_47 chr13:113695707-11369578 0.00015 56_[+2]_16 chr12:114184988-11418506 0.00017 23_[+2]_49 chr11:14095875-14095955 0.00017 39_[+2]_33 chr5:159228455-159228535 0.00017 68_[+2]_4 chr16:9704735-9704815 0.00017 21_[+2]_51 chr6:28936393-28936473 0.00022 42_[+2]_30 chr1:223552277-223552357 0.00023 34_[+2]_38 chr2:178260464-178260544 0.00023 47_[+2]_25 chr17:6396421-6396501 0.00028 6_[+2]_66 chr15:60593350-60593430 0.00028 45_[+2]_27 chr7:51397716-51397796 0.00029 22_[+2]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAYRTGAC width=8 seqs=59 chr7:100292100-100292180 ( 19) CACGTGAC 1 chr5:62072603-62072683 ( 12) CACGTGAC 1 chr4:10497404-10497484 ( 34) CACGTGAC 1 chr11:63725692-63725772 ( 18) CATGTGAC 1 chr12:22865167-22865247 ( 58) CATGTGAC 1 chr19:11487932-11488012 ( 58) CATGTGAC 1 chr12:131678806-13167888 ( 31) CATGTGAC 1 chr15:20569048-20569128 ( 27) CATGTGAC 1 chr6:42228520-42228600 ( 25) CATGTGAC 1 chr7:65965218-65965298 ( 34) CATGTGAC 1 chr20:54738980-54739060 ( 70) CATGTGAC 1 chr14:51886572-51886652 ( 35) CATGTGAC 1 chr10:7069356-7069436 ( 38) CATGTGAC 1 chr4:24807240-24807320 ( 48) CATGTGAC 1 chr9:119094550-119094630 ( 30) CATGTGAC 1 chr4:40424035-40424115 ( 38) CATGTGAC 1 chr8:17644774-17644854 ( 41) CATGTGAC 1 chr4:25109742-25109822 ( 52) CACATGAC 1 chr15:64364433-64364513 ( 1) CACATGAC 1 chr16:13228864-13228944 ( 3) CACATGAC 1 chr4:7754531-7754611 ( 11) CACATGAC 1 chr3:182666271-182666351 ( 26) CACATGAC 1 chr3:33271607-33271687 ( 4) CACATGAC 1 chr16:57720681-57720761 ( 23) CACATGAC 1 chr16:16177744-16177824 ( 71) CACATGAC 1 chr10:133622538-13362261 ( 67) CACATGAC 1 chr5:2131568-2131648 ( 65) CACATGAC 1 chr10:603911-603991 ( 43) CACATGAC 1 chr1:210055104-210055184 ( 54) CACATGAC 1 chrX:55744188-55744268 ( 1) CACGTGAT 1 chr5:158763775-158763855 ( 27) CACGTGAT 1 chr5:147700334-147700414 ( 37) CACGTGAT 1 chr14:68940691-68940771 ( 55) CACGTGAT 1 chr2:2864503-2864583 ( 51) CACGTGAT 1 chr1:155211038-155211118 ( 24) CATGTGAT 1 chr1:155188787-155188867 ( 37) CATGTGAT 1 chr19:47855503-47855583 ( 43) CATGTGAT 1 chr1:28485949-28486029 ( 6) CATGTGAT 1 chr14:49892062-49892142 ( 34) CATGTGAT 1 chr18:32444939-32445019 ( 43) CATGTGAT 1 chr13:50159668-50159748 ( 51) CACGTGGC 1 chr8:72760924-72761004 ( 46) CACGTGGC 1 chr4:190624309-190624389 ( 37) CACATGAT 1 chr2:132090459-132090539 ( 37) CACATGAT 1 chr2:99872113-99872193 ( 19) CACATGAT 1 chr5:173130619-173130699 ( 57) CATGTGGC 1 chr10:81055535-81055615 ( 26) CATGTGGC 1 chr18:9798197-9798277 ( 26) CATGTGGC 1 chr13:113695707-11369578 ( 57) CATGTGGC 1 chr12:114184988-11418506 ( 24) CACATGGC 1 chr11:14095875-14095955 ( 40) CACATGGC 1 chr5:159228455-159228535 ( 69) CACATGGC 1 chr16:9704735-9704815 ( 22) CACATGGC 1 chr6:28936393-28936473 ( 43) CATGTGGT 1 chr1:223552277-223552357 ( 35) CACATGGT 1 chr2:178260464-178260544 ( 48) CACATGGT 1 chr17:6396421-6396501 ( 7) CATGTGCC 1 chr15:60593350-60593430 ( 46) CATGTGCC 1 chr7:51397716-51397796 ( 23) CACATGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.53308 E= 4.4e-029 -1253 201 -1253 -1253 201 -1253 -1253 -1253 -1253 113 -1253 90 59 -1253 127 -1253 -1253 -1253 -1253 203 -1253 -1253 195 -1253 156 -228 -23 -1253 -1253 152 -1253 23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 59 E= 4.4e-029 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.542373 0.000000 0.457627 0.372881 0.000000 0.627119 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.728814 0.050847 0.220339 0.000000 0.000000 0.711864 0.000000 0.288136 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYRTGAC MEME-2 regular expression -------------------------------------------------------------------------------- CA[CT][GA]TG[AG][CT] -------------------------------------------------------------------------------- Time 8.27 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCCATCT MEME-3 width = 8 sites = 9 llr = 96 E-value = 6.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::8::: pos.-specific C a:aa::a: probability G :::::::: matrix T :a::2a:a bits 2.0 **** *** 1.8 **** *** 1.6 **** *** 1.4 **** *** Relative 1.2 ******** Entropy 1.0 ******** (15.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCATCT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:146611790-146611870 22 1.40e-05 accagagtaa ctccatct tgaatagggg chr8:9885488-9885568 66 1.40e-05 accagagcaa ctccatct tgaatag chr3:165371063-165371143 56 1.40e-05 gcatggctga ctccatct tgctcctacc chr4:117303976-117304056 28 1.40e-05 gccagagaaa ctccatct taaatagaac chr6:164361875-164361955 45 1.40e-05 accagagcga ctccatct tgaacggggg chr19:34096742-34096822 56 1.40e-05 accagagcaa ctccatct tgaatagggg chr3:46277096-46277176 17 1.40e-05 acataagtaa ctccatct tagaaaaaga chr8:123737313-123737393 47 2.78e-05 CCTTGTGTTT CTCCTTCT GGTTCCCTAG chr5:77995832-77995912 43 2.78e-05 AGACATTTTT CTCCTTCT GCTTTGGAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:146611790-146611870 1.4e-05 21_[+3]_51 chr8:9885488-9885568 1.4e-05 65_[+3]_7 chr3:165371063-165371143 1.4e-05 55_[+3]_17 chr4:117303976-117304056 1.4e-05 27_[+3]_45 chr6:164361875-164361955 1.4e-05 44_[+3]_28 chr19:34096742-34096822 1.4e-05 55_[+3]_17 chr3:46277096-46277176 1.4e-05 16_[+3]_56 chr8:123737313-123737393 2.8e-05 46_[+3]_26 chr5:77995832-77995912 2.8e-05 42_[+3]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCCATCT width=8 seqs=9 chr2:146611790-146611870 ( 22) CTCCATCT 1 chr8:9885488-9885568 ( 66) CTCCATCT 1 chr3:165371063-165371143 ( 56) CTCCATCT 1 chr4:117303976-117304056 ( 28) CTCCATCT 1 chr6:164361875-164361955 ( 45) CTCCATCT 1 chr19:34096742-34096822 ( 56) CTCCATCT 1 chr3:46277096-46277176 ( 17) CTCCATCT 1 chr8:123737313-123737393 ( 47) CTCCTTCT 1 chr5:77995832-77995912 ( 43) CTCCTTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2866 E= 6.2e+002 -982 201 -982 -982 -982 -982 -982 202 -982 201 -982 -982 -982 201 -982 -982 165 -982 -982 -14 -982 -982 -982 202 -982 201 -982 -982 -982 -982 -982 202 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 6.2e+002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.777778 0.000000 0.000000 0.222222 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-3 regular expression -------------------------------------------------------------------------------- CTCC[AT]TCT -------------------------------------------------------------------------------- Time 11.76 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCTGACA MEME-4 width = 8 sites = 9 llr = 97 E-value = 7.6e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::a1a pos.-specific C a:a:::9: probability G ::::a::: matrix T :a:a:::: bits 2.0 ****** * 1.8 ****** * 1.6 ****** * 1.4 ******** Relative 1.2 ******** Entropy 1.0 ******** (15.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCTGACA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:71101044-71101124 39 1.47e-05 gttcaaacgc ctctgaca taatgatcaa chr8:40983671-40983751 29 1.47e-05 gttcacaggt ctctgaca AAGCCACAGA chr12:113172870-11317295 11 1.47e-05 gttcgaacac ctctgaca CAAGCTCCCA chr15:81062331-81062411 60 1.47e-05 ggtttgaatg ctctgaca ctcctgaggt chr5:121215714-121215794 41 1.47e-05 gttcacaggc ctctgaca GAAGGAGAGG chr1:213860584-213860664 32 1.47e-05 gtttgaatgc ctctgaca atttccctgt chr7:93787376-93787456 20 1.47e-05 gttcgaatgt ctctgaca aaaccattgc chr1:116417316-116417396 33 1.47e-05 gctcaagcac ctctgaca tcatgactgg chr1:33768081-33768161 46 2.94e-05 TCATCTCTTT CTCTgaaa ttgacctccc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:71101044-71101124 1.5e-05 38_[+4]_34 chr8:40983671-40983751 1.5e-05 28_[+4]_44 chr12:113172870-11317295 1.5e-05 10_[+4]_62 chr15:81062331-81062411 1.5e-05 59_[+4]_13 chr5:121215714-121215794 1.5e-05 40_[+4]_32 chr1:213860584-213860664 1.5e-05 31_[+4]_41 chr7:93787376-93787456 1.5e-05 19_[+4]_53 chr1:116417316-116417396 1.5e-05 32_[+4]_40 chr1:33768081-33768161 2.9e-05 45_[+4]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCTGACA width=8 seqs=9 chr7:71101044-71101124 ( 39) CTCTGACA 1 chr8:40983671-40983751 ( 29) CTCTGACA 1 chr12:113172870-11317295 ( 11) CTCTGACA 1 chr15:81062331-81062411 ( 60) CTCTGACA 1 chr5:121215714-121215794 ( 41) CTCTGACA 1 chr1:213860584-213860664 ( 32) CTCTGACA 1 chr7:93787376-93787456 ( 20) CTCTGACA 1 chr1:116417316-116417396 ( 33) CTCTGACA 1 chr1:33768081-33768161 ( 46) CTCTGAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1193 E= 7.6e+002 -982 201 -982 -982 -982 -982 -982 202 -982 201 -982 -982 -982 -982 -982 202 -982 -982 195 -982 201 -982 -982 -982 -115 184 -982 -982 201 -982 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 7.6e+002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.111111 0.888889 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGACA MEME-4 regular expression -------------------------------------------------------------------------------- CTCTGACA -------------------------------------------------------------------------------- Time 15.24 secs. ******************************************************************************** ******************************************************************************** MOTIF TCAGCTGA MEME-5 width = 8 sites = 9 llr = 97 E-value = 1.4e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a::::a pos.-specific C :a::a::: probability G :::9::a: matrix T a::1:a:: bits 2.0 *** **** 1.8 *** **** 1.6 *** **** 1.4 ******** Relative 1.2 ******** Entropy 1.0 ******** (15.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCAGCTGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:1627961-1628041 35 1.54e-05 GTGACCCGCG TCAGCTGA CCCGTCACGG chr11:93140512-93140592 69 1.54e-05 catgatgaaa tcagctga tgtc chr6:138657494-138657574 36 1.54e-05 CGTGCATCAG TCAGCTGA CCTGTCACGT chr15:72929268-72929348 63 1.54e-05 GATCGTCGAC TCAGCTGA CCTGGCGGGA chr8:64082609-64082689 51 1.54e-05 AACAGTGCAG TCAGCTGA CTGAAACATT chr2:109622378-109622458 28 1.54e-05 gcccatgtgt tcagctga aaagaggaga chr7:1462616-1462696 52 1.54e-05 TCCTGTTTTG TCAGCTGA TGGGTCATGT chr15:57324037-57324117 46 1.54e-05 ggtaatgaca tcagctga cagccgttgc chr22:19559068-19559148 36 2.99e-05 GCCAAGTGAG TCATCTGA AAGCAGTCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:1627961-1628041 1.5e-05 34_[+5]_38 chr11:93140512-93140592 1.5e-05 68_[+5]_4 chr6:138657494-138657574 1.5e-05 35_[+5]_37 chr15:72929268-72929348 1.5e-05 62_[+5]_10 chr8:64082609-64082689 1.5e-05 50_[+5]_22 chr2:109622378-109622458 1.5e-05 27_[+5]_45 chr7:1462616-1462696 1.5e-05 51_[+5]_21 chr15:57324037-57324117 1.5e-05 45_[+5]_27 chr22:19559068-19559148 3e-05 35_[+5]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCAGCTGA width=8 seqs=9 chr17:1627961-1628041 ( 35) TCAGCTGA 1 chr11:93140512-93140592 ( 69) TCAGCTGA 1 chr6:138657494-138657574 ( 36) TCAGCTGA 1 chr15:72929268-72929348 ( 63) TCAGCTGA 1 chr8:64082609-64082689 ( 51) TCAGCTGA 1 chr2:109622378-109622458 ( 28) TCAGCTGA 1 chr7:1462616-1462696 ( 52) TCAGCTGA 1 chr15:57324037-57324117 ( 46) TCAGCTGA 1 chr22:19559068-19559148 ( 36) TCATCTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1193 E= 1.4e+003 -982 -982 -982 202 -982 201 -982 -982 201 -982 -982 -982 -982 -982 178 -114 -982 201 -982 -982 -982 -982 -982 202 -982 -982 195 -982 201 -982 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 1.4e+003 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCTGA MEME-5 regular expression -------------------------------------------------------------------------------- TCAGCTGA -------------------------------------------------------------------------------- Time 18.70 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:32444939-32445019 5.96e-03 42_[+2(9.10e-05)]_30 chr7:71333868-71333948 7.03e-01 80 chr1:210055104-210055184 1.92e-05 52_[+1(3.01e-05)]_3_[+1(3.01e-05)]_\ 9 chr10:603911-603991 5.57e-04 25_[+1(3.01e-05)]_9_[+2(4.57e-05)]_\ 30 chr2:111849366-111849446 9.51e-01 80 chr8:17644774-17644854 2.78e-04 40_[+2(3.08e-05)]_7_[+1(3.01e-05)]_\ 17 chr7:154384144-154384224 6.16e-01 80 chr4:40424035-40424115 1.23e-04 13_[+1(3.01e-05)]_16_[+2(3.08e-05)]_\ 35 chr4:164788144-164788224 5.20e-05 31_[+1(3.01e-05)]_41 chr9:119094550-119094630 1.28e-03 13_[+2(4.57e-05)]_8_[+2(3.08e-05)]_\ 43 chr16:9704735-9704815 5.29e-04 20_[+1(9.13e-05)]_8_[+1(3.01e-05)]_\ 36 chr22:22724482-22724562 1.82e-04 37_[+1(3.01e-05)]_35 chr1:208005292-208005372 1.34e-03 7_[+2(3.08e-05)]_65 chr13:66917831-66917911 1.25e-02 53_[+5(5.93e-05)]_19 chr4:109191692-109191772 2.11e-04 65_[+1(5.99e-05)]_7 chr5:2131568-2131648 1.38e-03 29_[+1(3.01e-05)]_27_[+2(4.57e-05)]_\ 8 chr20:56769472-56769552 1.99e-02 30_[+1(9.13e-05)]_42 chr16:54988143-54988223 5.84e-01 80 chr2:99872113-99872193 5.73e-04 17_[+1(3.01e-05)]_15_[+1(3.01e-05)]_\ 32 chr14:66512879-66512959 9.99e-01 80 chr2:217982429-217982509 1.07e-03 20_[+2(4.57e-05)]_52 chr6:16045596-16045676 9.32e-04 30_[+1(3.01e-05)]_42 chr2:132090459-132090539 3.29e-05 19_[+1(3.01e-05)]_8_[+1(3.01e-05)]_\ 37 chr1:5747162-5747242 7.72e-04 12_[+1(3.01e-05)]_60 chr4:190624309-190624389 7.30e-05 35_[+1(3.01e-05)]_7_[+1(3.01e-05)]_\ 22 chr4:24807240-24807320 1.51e-04 47_[+2(3.08e-05)]_5_[+2(3.08e-05)]_\ 12 chr10:133622538-13362261 8.87e-04 49_[+1(9.13e-05)]_9_[+2(4.57e-05)]_\ 6 chr10:7069356-7069436 6.73e-03 21_[+2(9.10e-05)]_8_[+2(3.08e-05)]_\ 35 chr16:16177744-16177824 9.33e-04 53_[+1(3.01e-05)]_8_[+1(3.01e-05)]_\ 3 chr15:57324037-57324117 8.32e-05 29_[+1(9.13e-05)]_8_[+5(1.54e-05)]_\ 27 chr7:1462616-1462696 1.95e-05 51_[+5(1.54e-05)]_5_[+2(3.08e-05)]_\ 8 chr2:109622378-109622458 2.14e-04 27_[+5(1.54e-05)]_23_[+1(3.01e-05)]_\ 14 chr16:57720681-57720761 9.91e-04 5_[+1(5.99e-05)]_9_[+2(4.57e-05)]_\ 50 chr18:2516564-2516644 4.37e-04 6_[+2(3.08e-05)]_66 chr14:51886572-51886652 3.66e-04 3_[+2(1.55e-05)]_23_[+2(3.08e-05)]_\ 38 chr2:2864503-2864583 6.77e-03 18_[+2(9.10e-05)]_8_[+2(7.57e-05)]_\ 8_[+2(7.57e-05)]_8_[+2(1.55e-05)]_6 chr1:95835803-95835883 5.57e-01 80 chr10:125542188-12554226 7.23e-02 80 chr2:81694321-81694401 2.65e-05 10_[+2(1.55e-05)]_62 chr8:64082609-64082689 6.10e-03 50_[+5(1.54e-05)]_22 chr16:27993676-27993756 3.38e-04 28_[+1(5.99e-05)]_9_[+2(1.55e-05)]_\ 27 chr5:159228455-159228535 1.05e-03 45_[+1(3.01e-05)]_27 chr7:139233493-139233573 3.54e-03 80 chr18:10291042-10291122 1.59e-03 47_[+2(7.57e-05)]_25 chr14:68940691-68940771 7.58e-04 22_[+2(9.10e-05)]_7_[+1(3.01e-05)]_\ 9_[+2(7.57e-05)]_18 chr13:113695707-11369578 1.73e-02 14_[+1(9.13e-05)]_58 chr20:54738980-54739060 1.87e-05 53_[+2(1.55e-05)]_8_[+2(3.08e-05)]_\ 3 chr7:57271316-57271396 2.14e-03 70_[+1(3.01e-05)]_2 chr8:72760924-72761004 2.48e-02 12_[+1(9.13e-05)]_40_[+1(9.13e-05)]_\ 12 chr10:21823772-21823852 2.63e-01 80 chr10:29518325-29518405 8.42e-03 80 chrX:14139428-14139508 3.31e-05 20_[+1(3.01e-05)]_52 chr10:23670460-23670540 9.13e-01 80 chr20:1878391-1878471 8.43e-03 9_[+1(5.99e-05)]_63 chr2:160001395-160001475 8.01e-03 59_[+1(9.13e-05)]_13 chr12:95822413-95822493 1.95e-03 11_[+1(3.01e-05)]_61 chr20:56769679-56769759 2.83e-02 80 chr14:49892062-49892142 1.16e-03 19_[+1(3.01e-05)]_5_[+1(5.99e-05)]_\ 40 chr1:116417316-116417396 2.85e-02 32_[+4(1.47e-05)]_40 chr3:33271607-33271687 1.19e-03 2_[+1(3.01e-05)]_9_[+1(3.01e-05)]_\ 53 chr6:28936393-28936473 1.04e-03 56_[+1(3.01e-05)]_16 chr1:8357460-8357540 1.75e-02 80 chr7:51397716-51397796 1.56e-02 80 chr13:37439676-37439756 8.09e-01 80 chr19:16546853-16546933 1.94e-04 49_[+1(3.01e-05)]_23 chr2:178260464-178260544 2.22e-02 46_[+1(9.13e-05)]_8_[+1(9.13e-05)]_\ 10 chr7:65965218-65965298 1.06e-04 33_[+2(3.08e-05)]_25_[+1(3.01e-05)]_\ 6 chr3:46277096-46277176 4.71e-04 16_[+3(1.40e-05)]_56 chr14:102414959-10241503 8.83e-01 80 chr12:108440108-10844018 3.68e-04 24_[+1(3.01e-05)]_48 chr2:103291524-103291604 9.12e-01 80 chr6:160582752-160582832 7.80e-01 80 chr16:83864116-83864196 6.93e-03 80 chr1:28485949-28486029 2.40e-03 4_[+1(5.99e-05)]_5_[+1(5.99e-05)]_\ 55 chr2:61614901-61614981 9.44e-01 80 chr10:51827661-51827741 8.79e-01 80 chr19:34096742-34096822 1.24e-01 55_[+3(1.40e-05)]_17 chr1:5747423-5747503 2.27e-02 80 chr3:182666271-182666351 1.68e-04 24_[+1(3.01e-05)]_16_[+1(3.01e-05)]_\ 24 chr18:9798197-9798277 2.86e-04 40_[+5(5.93e-05)]_32 chr13:112829644-11282972 3.08e-03 13_[+1(3.01e-05)]_24_[+1(3.01e-05)]_\ 27 chr20:44740002-44740082 6.37e-03 52_[+1(5.99e-05)]_20 chr19:47855503-47855583 1.76e-04 29_[+1(3.01e-05)]_4_[+1(5.99e-05)]_\ 31 chr20:46944249-46944329 6.04e-04 49_[+1(3.01e-05)]_23 chr15:72929268-72929348 4.01e-05 46_[+1(3.01e-05)]_8_[+5(1.54e-05)]_\ 10 chr5:147700334-147700414 7.88e-04 35_[+1(3.01e-05)]_11_[+1(3.01e-05)]_\ 18 chr16:69556952-69557032 7.34e-01 80 chr10:6913185-6913265 2.89e-04 64_[+1(3.01e-05)]_8 chr19:34012341-34012421 8.73e-01 80 chrX:101975567-101975647 5.37e-04 34_[+1(9.13e-05)]_14_[+2(3.08e-05)]_\ 16 chr2:20386469-20386549 7.21e-01 80 chr7:2353925-2354005 2.15e-01 80 chr10:81055535-81055615 4.13e-04 41_[+5(5.93e-05)]_31 chr15:25018203-25018283 4.96e-01 80 chr17:44268266-44268346 4.97e-04 26_[+1(3.01e-05)]_46 chr15:68936631-68936711 9.64e-01 80 chr14:89498647-89498727 8.10e-01 80 chr16:19567154-19567234 8.16e-01 80 chr15:60593350-60593430 1.04e-03 68_[+2(3.08e-05)]_4 chr2:20386675-20386755 2.60e-01 80 chr18:61536717-61536797 5.60e-03 58_[+2(4.57e-05)]_14 chr6:138657494-138657574 5.53e-06 35_[+5(1.54e-05)]_5_[+2(1.55e-05)]_\ 24 chr2:102437644-102437724 3.88e-04 38_[+2(3.08e-05)]_34 chr1:231578626-231578706 3.89e-01 80 chr5:77995832-77995912 2.33e-04 11_[+1(9.13e-05)]_23_[+3(2.78e-05)]_\ 30 chr1:156265408-156265488 5.47e-04 66_[+1(3.01e-05)]_6 chr17:6396421-6396501 1.23e-03 23_[+1(3.01e-05)]_49 chr4:10497404-10497484 6.80e-04 33_[+2(1.55e-05)]_27_[+1(3.01e-05)]_\ 4 chr6:16045804-16045884 7.96e-01 80 chr15:25123450-25123530 8.97e-04 69_[+5(5.93e-05)]_3 chr4:7754531-7754611 2.54e-03 10_[+2(4.57e-05)]_9_[+2(1.55e-05)]_\ 45 chr12:116202172-11620225 3.87e-02 80 chr8:123737313-123737393 1.85e-05 46_[+3(2.78e-05)]_15_[+5(5.93e-05)]_\ 3 chr15:74392524-74392604 7.53e-01 80 chr1:223486587-223486667 3.12e-02 80 chr17:26684908-26684988 4.11e-01 80 chr7:93787376-93787456 7.82e-02 19_[+4(1.47e-05)]_53 chr6:42228520-42228600 1.28e-04 1_[+2(3.08e-05)]_15_[+2(3.08e-05)]_\ 48 chr12:114178655-11417873 4.37e-04 35_[+1(3.01e-05)]_37 chr11:1785064-1785144 9.61e-01 80 chr22:22492693-22492773 8.13e-01 80 chr11:14095875-14095955 2.93e-04 67_[+2(3.08e-05)]_5 chr22:24335987-24336067 6.98e-01 80 chr1:155189458-155189538 2.22e-04 23_[+1(3.01e-05)]_49 chr20:10299461-10299541 4.35e-04 32_[+2(3.08e-05)]_40 chr20:52127295-52127375 4.50e-05 23_[+3(5.64e-05)]_23_[+1(3.01e-05)]_\ 18 chr12:115575890-11557597 1.00e+00 80 chr7:65643434-65643514 9.41e-01 80 chr18:5369638-5369718 8.20e-03 59_[+1(9.13e-05)]_13 chr13:20693418-20693498 9.73e-04 46_[+1(3.01e-05)]_26 chr13:50159668-50159748 6.08e-04 49_[+1(9.13e-05)]_12_[+2(1.55e-05)]_\ 3 chr5:158763775-158763855 1.64e-03 26_[+2(7.57e-05)]_8_[+2(1.55e-05)]_\ 30 chr15:20569048-20569128 3.78e-04 7_[+2(9.10e-05)]_11_[+2(3.08e-05)]_\ 46 chrX:101914821-101914901 8.26e-04 10_[+1(9.13e-05)]_24_[+2(3.08e-05)]_\ 30 chr1:155880842-155880922 9.95e-01 80 chr7:151453257-151453337 7.08e-04 54_[+1(5.99e-05)]_18 chr17:66470697-66470777 6.98e-02 80 chr19:51497494-51497574 1.68e-04 69_[+1(3.01e-05)]_3 chr1:86078745-86078825 5.92e-01 80 chr19:7137344-7137424 8.46e-05 13_[+1(3.01e-05)]_59 chr1:223552277-223552357 1.91e-03 17_[+1(9.13e-05)]_8_[+1(9.13e-05)]_\ 39 chr1:213860584-213860664 3.86e-02 31_[+4(1.47e-05)]_41 chr14:51886771-51886851 2.46e-01 80 chr5:121215714-121215794 2.29e-02 40_[+4(1.47e-05)]_32 chr9:99226934-99227014 7.28e-04 22_[+1(5.99e-05)]_50 chr22:19559068-19559148 2.06e-05 35_[+5(2.99e-05)]_6_[+1(5.99e-05)]_\ 23 chr1:212719465-212719545 1.03e-02 80 chr1:9138519-9138599 9.92e-01 80 chr16:8561514-8561594 1.24e-01 80 chr15:72929467-72929547 5.88e-01 80 chr1:15288358-15288438 2.53e-01 80 chr5:62072603-62072683 4.85e-04 11_[+2(1.55e-05)]_2_[+1(3.01e-05)]_\ 51 chr7:100292100-100292180 8.30e-05 18_[+2(1.55e-05)]_17_[+2(1.55e-05)]_\ 29 chr15:57864167-57864247 9.97e-01 80 chr1:155188787-155188867 5.89e-04 35_[+1(5.99e-05)]_12_[+1(3.01e-05)]_\ 17 chr2:127075625-127075705 3.45e-02 80 chr10:129741212-12974129 7.24e-02 37_[+1(9.13e-05)]_35 chr1:30337721-30337801 6.86e-04 2_[+1(3.01e-05)]_70 chr14:68283250-68283330 6.09e-03 80 chr16:29125918-29125998 4.99e-03 46_[+1(9.13e-05)]_26 chr2:178117420-178117500 2.46e-01 80 chr15:58637103-58637183 1.77e-02 80 chr5:168447271-168447351 5.65e-05 39_[+2(3.08e-05)]_33 chr19:34012587-34012667 7.32e-01 80 chr6:164361875-164361955 8.12e-02 44_[+3(1.40e-05)]_28 chr1:142806830-142806910 8.53e-01 80 chr6:158653084-158653164 1.00e+00 80 chr16:13228864-13228944 1.32e-03 1_[+1(3.01e-05)]_34_[+1(3.01e-05)]_\ 29 chr12:131678806-13167888 8.62e-04 30_[+2(3.08e-05)]_11_[+2(3.08e-05)]_\ 23 chr16:23508768-23508848 5.75e-04 7_[+1(9.13e-05)]_65 chr19:11487932-11488012 4.33e-04 57_[+2(3.08e-05)]_6_[+2(3.08e-05)]_\ 1 chr11:93140512-93140592 2.95e-05 55_[+1(3.01e-05)]_5_[+5(1.54e-05)]_\ 4 chr2:220043170-220043250 9.93e-01 80 chr4:117303976-117304056 2.66e-02 27_[+3(1.40e-05)]_45 chr1:175379925-175380005 3.35e-03 43_[+1(5.99e-05)]_7_[+1(5.99e-05)]_\ 14 chr21:45253474-45253554 4.35e-04 58_[+2(3.08e-05)]_14 chr1:229178043-229178123 7.83e-01 80 chr3:125919553-125919633 2.43e-01 80 chr7:28865523-28865603 6.82e-02 80 chr15:81062331-81062411 4.96e-02 59_[+4(1.47e-05)]_13 chr22:31002851-31002931 6.65e-01 80 chr15:64364433-64364513 4.28e-02 [+2(4.57e-05)]_72 chr13:92048413-92048493 4.58e-01 80 chr9:136015357-136015437 2.34e-01 80 chr8:143392024-143392104 2.46e-05 53_[+2(3.08e-05)]_19 chr22:22572136-22572216 1.96e-01 80 chr17:3539949-3540029 2.22e-03 80 chrX:55744188-55744268 2.31e-01 [+2(7.57e-05)]_72 chr1:181141421-181141501 9.09e-02 80 chr2:26925048-26925128 4.37e-04 33_[+1(3.01e-05)]_39 chr5:173130619-173130699 2.19e-04 71_[+1(3.01e-05)]_1 chr19:7587744-7587824 7.00e-01 80 chrX:129086700-129086780 7.65e-01 80 chr17:38753010-38753090 4.85e-04 48_[+1(3.01e-05)]_24 chr3:165371063-165371143 3.40e-02 55_[+3(1.40e-05)]_17 chr1:211421386-211421466 5.59e-05 69_[+2(3.08e-05)]_3 chr17:1627961-1628041 1.69e-05 21_[+2(1.55e-05)]_5_[+5(1.54e-05)]_\ 38 chr16:88923765-88923845 8.37e-01 80 chr12:22865167-22865247 2.55e-03 57_[+2(3.08e-05)]_15 chr11:66774068-66774148 4.51e-01 80 chr15:78645392-78645472 3.94e-01 80 chr13:81299418-81299498 6.91e-01 80 chr12:110704367-11070444 9.82e-01 80 chr3:5020796-5020876 6.61e-01 80 chr22:22414523-22414603 4.62e-01 80 chr12:113172870-11317295 4.07e-02 10_[+4(1.47e-05)]_62 chr12:114184988-11418506 6.35e-05 7_[+2(3.08e-05)]_7_[+1(9.13e-05)]_\ 50 chr1:89636335-89636415 6.82e-01 80 chr1:30337924-30338004 8.97e-01 80 chr1:224646941-224647021 4.19e-01 80 chr8:40983671-40983751 7.28e-02 28_[+4(1.47e-05)]_44 chr11:63725692-63725772 1.61e-03 [+1(9.13e-05)]_9_[+2(3.08e-05)]_55 chr12:113853991-11385407 2.62e-03 33_[+2(4.57e-05)]_39 chr18:20806961-20807041 9.33e-01 80 chr9:130955202-130955282 1.00e+00 80 chr17:78075374-78075454 9.98e-01 80 chr22:21964194-21964274 9.86e-01 80 chr8:9885488-9885568 1.53e-02 65_[+3(1.40e-05)]_7 chr7:129864116-129864196 2.69e-01 80 chr13:93256591-93256671 1.00e+00 80 chr16:46722926-46723006 7.73e-01 80 chr12:2986271-2986351 7.56e-01 80 chr2:146611790-146611870 9.17e-02 21_[+3(1.40e-05)]_51 chr11:44422141-44422221 7.85e-04 51_[+1(5.99e-05)]_21 chr16:9704942-9705022 3.47e-01 80 chr2:43449133-43449213 1.63e-03 80 chr1:197659370-197659450 1.05e-03 43_[+1(3.01e-05)]_29 chr1:236687828-236687908 2.93e-04 47_[+2(3.08e-05)]_25 chr10:125701691-12570177 1.07e-01 80 chr6:42228725-42228805 9.47e-01 80 chr17:42422382-42422462 1.07e-03 64_[+1(3.01e-05)]_8 chr13:92319193-92319273 9.68e-01 80 chr7:102988436-102988516 5.81e-01 80 chr7:25967379-25967459 6.23e-01 80 chr1:33768081-33768161 1.27e-02 45_[+4(2.94e-05)]_27 chr12:53645873-53645953 1.37e-03 3_[+1(3.01e-05)]_69 chr11:67231911-67231991 9.86e-01 80 chr2:220042971-220043051 5.20e-01 80 chr1:155211038-155211118 6.89e-04 22_[+1(5.99e-05)]_12_[+1(3.01e-05)]_\ 30 chr15:99408785-99408865 8.90e-01 80 chr4:25109742-25109822 5.22e-06 36_[+1(5.99e-05)]_7_[+2(4.57e-05)]_\ 21 chr21:11032567-11032647 7.51e-02 7_[+4(5.93e-05)]_65 chr11:6640509-6640589 1.27e-01 80 chr2:152683373-152683453 1.62e-04 52_[+2(1.55e-05)]_20 chr16:5083865-5083945 6.79e-02 80 chr17:27253744-27253824 4.48e-01 80 chr7:25683544-25683624 6.31e-05 66_[+1(3.01e-05)]_6 chr10:32217845-32217925 1.00e+00 80 chrX:153209930-153210010 4.51e-01 80 chr7:71101044-71101124 2.79e-02 38_[+4(1.47e-05)]_34 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************