******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF274.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:9492193-9492273 1.0000 80 chr2:95880893-95880973 1.0000 80 chr6:27368940-27369020 1.0000 80 chr12:133503168-13350324 1.0000 80 chr16:75203995-75204075 1.0000 80 chr19:58619295-58619375 1.0000 80 chr19:37210614-37210694 1.0000 80 chr7:56007367-56007447 1.0000 80 chr19:52497538-52497618 1.0000 80 chr12:133682383-13368246 1.0000 80 chr19:35250270-35250350 1.0000 80 chr16:68598054-68598134 1.0000 80 chr11:117958255-11795833 1.0000 80 chrX:47272883-47272963 1.0000 80 chr12:133697209-13369728 1.0000 80 chr19:37734143-37734223 1.0000 80 chr9:115805181-115805261 1.0000 80 chr19:53669041-53669121 1.0000 80 chr7:56534417-56534497 1.0000 80 chr20:60684515-60684595 1.0000 80 chr5:178506444-178506524 1.0000 80 chr19:37619196-37619276 1.0000 80 chr10:132081610-13208169 1.0000 80 chr19:9406156-9406236 1.0000 80 chr9:125489222-125489302 1.0000 80 chr5:179685633-179685713 1.0000 80 chr18:60356161-60356241 1.0000 80 chr3:75786169-75786249 1.0000 80 chr13:49548119-49548199 1.0000 80 chr7:57342425-57342505 1.0000 80 chr3:44762859-44762939 1.0000 80 chr19:52977287-52977367 1.0000 80 chr8:146067784-146067864 1.0000 80 chr19:35250524-35250604 1.0000 80 chr10:44020091-44020171 1.0000 80 chr19:58619940-58620020 1.0000 80 chr19:37310128-37310208 1.0000 80 chr12:133682992-13368307 1.0000 80 chr9:99580958-99581038 1.0000 80 chr5:178392575-178392655 1.0000 80 chr19:58678301-58678381 1.0000 80 chr3:44540787-44540867 1.0000 80 chr1:247150576-247150656 1.0000 80 chr16:57251038-57251118 1.0000 80 chr2:102762565-102762645 1.0000 80 chr19:38055658-38055738 1.0000 80 chr19:36884361-36884441 1.0000 80 chr8:196128-196208 1.0000 80 chr19:52618967-52619047 1.0000 80 chr7:6714727-6714807 1.0000 80 chr7:57233278-57233358 1.0000 80 chr12:133779967-13378004 1.0000 80 chr17:16455442-16455522 1.0000 80 chr7:63337177-63337257 1.0000 80 chr11:16452367-16452447 1.0000 80 chr5:150311106-150311186 1.0000 80 chr19:38294010-38294090 1.0000 80 chr2:171767973-171768053 1.0000 80 chr16:68597763-68597843 1.0000 80 chr19:52978144-52978224 1.0000 80 chr17:16525840-16525920 1.0000 80 chr9:114304926-114305006 1.0000 80 chr17:4996001-4996081 1.0000 80 chr5:150275160-150275240 1.0000 80 chr18:32833870-32833950 1.0000 80 chr7:92569277-92569357 1.0000 80 chr12:6753271-6753351 1.0000 80 chr4:155875-155955 1.0000 80 chr5:178359378-178359458 1.0000 80 chr5:140640662-140640742 1.0000 80 chr7:6715860-6715940 1.0000 80 chr7:18289943-18290023 1.0000 80 chr6:27326570-27326650 1.0000 80 chr3:44541378-44541458 1.0000 80 chr15:25318051-25318131 1.0000 80 chr3:75787824-75787904 1.0000 80 chr19:58490074-58490154 1.0000 80 chr19:37619569-37619649 1.0000 80 chrX:47835722-47835802 1.0000 80 chr19:53740661-53740741 1.0000 80 chr8:145933174-145933254 1.0000 80 chr1:247201180-247201260 1.0000 80 chr3:44763577-44763657 1.0000 80 chr19:52659418-52659498 1.0000 80 chr19:12576169-12576249 1.0000 80 chr16:31766623-31766703 1.0000 80 chr19:19946656-19946736 1.0000 80 chr5:140640065-140640145 1.0000 80 chr18:32886663-32886743 1.0000 80 chr19:58639557-58639637 1.0000 80 chr19:37241108-37241188 1.0000 80 chr2:133224209-133224289 1.0000 80 chr2:95815325-95815405 1.0000 80 chr5:178359592-178359672 1.0000 80 chr15:25318321-25318401 1.0000 80 chr12:133780236-13378031 1.0000 80 chr19:37211417-37211497 1.0000 80 chr3:13944389-13944469 1.0000 80 chr12:133635226-13363530 1.0000 80 chr19:36940085-36940165 1.0000 80 chr19:12358571-12358651 1.0000 80 chr19:2834375-2834455 1.0000 80 chr15:99373385-99373465 1.0000 80 chr19:56952721-56952801 1.0000 80 chr19:9453516-9453596 1.0000 80 chr12:133635005-13363508 1.0000 80 chr19:52090426-52090506 1.0000 80 chr19:58724241-58724321 1.0000 80 chr17:4995645-4995725 1.0000 80 chr19:52376561-52376641 1.0000 80 chr19:35434778-35434858 1.0000 80 chr19:2834585-2834665 1.0000 80 chr1:247320199-247320279 1.0000 80 chr2:73941421-73941501 1.0000 80 chr3:44763782-44763862 1.0000 80 chr6:27420318-27420398 1.0000 80 chr19:37038221-37038301 1.0000 80 chr19:58773816-58773896 1.0000 80 chr19:37129946-37130026 1.0000 80 chr8:125989141-125989221 1.0000 80 chr12:133732868-13373294 1.0000 80 chr16:31927462-31927542 1.0000 80 chr3:75787108-75787188 1.0000 80 chr19:38055868-38055948 1.0000 80 chr5:150330308-150330388 1.0000 80 chr19:58708522-58708602 1.0000 80 chr5:150275389-150275469 1.0000 80 chr19:38160399-38160479 1.0000 80 chr19:44351515-44351595 1.0000 80 chr1:40929013-40929093 1.0000 80 chr4:367048-367128 1.0000 80 chr19:44980802-44980882 1.0000 80 chr19:12125963-12126043 1.0000 80 chr19:52418528-52418608 1.0000 80 chr9:99580283-99580363 1.0000 80 chr6:27326769-27326849 1.0000 80 chr19:37904585-37904665 1.0000 80 chr19:23159196-23159276 1.0000 80 chr13:91333791-91333871 1.0000 80 chr19:52364975-52365055 1.0000 80 chr9:99500774-99500854 1.0000 80 chr7:62548077-62548157 1.0000 80 chr9:115759747-115759827 1.0000 80 chrX:47918689-47918769 1.0000 80 chr16:31613318-31613398 1.0000 80 chr19:44981408-44981488 1.0000 80 chr4:265482-265562 1.0000 80 chr16:68598350-68598430 1.0000 80 chr6:149560865-149560945 1.0000 80 chr10:132080914-13208099 1.0000 80 chr19:19822278-19822358 1.0000 80 chr11:3380712-3380792 1.0000 80 chr19:56935400-56935480 1.0000 80 chr7:111111227-111111307 1.0000 80 chr9:99521482-99521562 1.0000 80 chr7:92498112-92498192 1.0000 80 chr1:227842977-227843057 1.0000 80 chr10:44112424-44112504 1.0000 80 chr19:7083484-7083564 1.0000 80 chr5:150275744-150275824 1.0000 80 chr1:247264072-247264152 1.0000 80 chr9:115805523-115805603 1.0000 80 chr3:44776314-44776394 1.0000 80 chr19:54080519-54080599 1.0000 80 chr4:155293-155373 1.0000 80 chr1:161019448-161019528 1.0000 80 chr19:44981023-44981103 1.0000 80 chr19:37368159-37368239 1.0000 80 chr14:50938712-50938792 1.0000 80 chr15:72114085-72114165 1.0000 80 chr5:14256292-14256372 1.0000 80 chr12:133502355-13350243 1.0000 80 chr8:145933383-145933463 1.0000 80 chr5:140144041-140144121 1.0000 80 chr2:95815532-95815612 1.0000 80 chr19:8922236-8922316 1.0000 80 chr19:57089387-57089467 1.0000 80 chr4:437376-437456 1.0000 80 chr2:65702275-65702355 1.0000 80 chr20:45084911-45084991 1.0000 80 chr19:52569953-52570033 1.0000 80 chr4:368497-368577 1.0000 80 chr13:90787910-90787990 1.0000 80 chr1:227885226-227885306 1.0000 80 chr19:52418801-52418881 1.0000 80 chr9:115759951-115760031 1.0000 80 chr19:37904877-37904957 1.0000 80 chr2:106823800-106823880 1.0000 80 chr19:58639759-58639839 1.0000 80 chr13:91654776-91654856 1.0000 80 chr19:52365353-52365433 1.0000 80 chr19:56935599-56935679 1.0000 80 chr5:179686044-179686124 1.0000 80 chr19:58490276-58490356 1.0000 80 chr19:53116647-53116727 1.0000 80 chr19:38294219-38294299 1.0000 80 chr1:23688740-23688820 1.0000 80 chr22:23025147-23025227 1.0000 80 chr19:12638252-12638332 1.0000 80 chr7:56754157-56754237 1.0000 80 chr6:27420534-27420614 1.0000 80 chr20:60685206-60685286 1.0000 80 chr7:91910308-91910388 1.0000 80 chr13:91589331-91589411 1.0000 80 chr7:64438580-64438660 1.0000 80 chr12:120420883-12042096 1.0000 80 chr1:213470545-213470625 1.0000 80 chr19:52869749-52869829 1.0000 80 chr7:6731601-6731681 1.0000 80 chr12:133780438-13378051 1.0000 80 chr1:247353354-247353434 1.0000 80 chr3:13943293-13943373 1.0000 80 chr19:58724443-58724523 1.0000 80 chr19:40519867-40519947 1.0000 80 chr19:9639409-9639489 1.0000 80 chr13:81102149-81102229 1.0000 80 chr22:22769748-22769828 1.0000 80 chr22:22517833-22517913 1.0000 80 chr19:14829490-14829570 1.0000 80 chrX:47307728-47307808 1.0000 80 chr22:36208864-36208944 1.0000 80 chr1:40961133-40961213 1.0000 80 chr19:19946341-19946421 1.0000 80 chr5:140638756-140638836 1.0000 80 chr1:246904708-246904788 1.0000 80 chr22:22084841-22084921 1.0000 80 chr9:99521720-99521800 1.0000 80 chr13:91889932-91890012 1.0000 80 chr3:44612411-44612491 1.0000 80 chr16:31766824-31766904 1.0000 80 chr7:57529289-57529369 1.0000 80 chr8:18035669-18035749 1.0000 80 chr5:140144644-140144724 1.0000 80 chr22:23350213-23350293 1.0000 80 chr7:105401243-105401323 1.0000 80 chr9:130206938-130207018 1.0000 80 chr13:90588942-90589022 1.0000 80 chr13:91821711-91821791 1.0000 80 chr12:133500935-13350101 1.0000 80 chr22:23254851-23254931 1.0000 80 chr8:125989346-125989426 1.0000 80 chr1:145038425-145038505 1.0000 80 chr2:27802558-27802638 1.0000 80 chr19:35434991-35435071 1.0000 80 chr10:42832489-42832569 1.0000 80 chr13:90501810-90501890 1.0000 80 chr3:75787517-75787597 1.0000 80 chr7:146937457-146937537 1.0000 80 chr13:90850041-90850121 1.0000 80 chr22:22452956-22453036 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF274/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF274.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.282 C 0.215 G 0.211 T 0.292 Background letter frequencies (from file dataset with add-one prior applied): A 0.282 C 0.215 G 0.211 T 0.292 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GARTTCWC MEME-1 width = 8 sites = 248 llr = 1426 E-value = 1.7e-123 ******************************************************************************** -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :85:::5: pos.-specific C :::31a:7 probability G 923::::: matrix T ::179:53 bits 2.2 2.0 * 1.8 * 1.6 * * Relative 1.3 * * Entropy 1.1 * ** (8.3 bits) 0.9 ** *** * 0.7 ** ***** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAATTCTC consensus GC AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:99521720-99521800 32 3.80e-05 TCTGCTGTAT GAATTCTC TGATGAGTAC chr22:36208864-36208944 49 3.80e-05 TACACAGTAT GAATTCTC TCACAGCGTT chrX:47307728-47307808 60 3.80e-05 TCTCCAGTAT GAATTCTC TGATGTGTGT chr19:40519867-40519947 20 3.80e-05 CAACATCTGA GAATTCAC ACTGGTGAGA chr1:247353354-247353434 18 3.80e-05 TCTCTTGTAT GAATTCTC TTATGGTTTG chr12:133780438-13378051 65 3.80e-05 GTGCATCAGA GAATTCAC ACAGGAGA chr7:64438580-64438660 54 3.80e-05 TCTCCAGTAT GAATTCTC TTATGTCCAA chr19:37904877-37904957 61 3.80e-05 TCTCCAGTAT GAATTCTC AGATGTCTGA chr9:115805523-115805603 12 3.80e-05 TCACCTGTAT GAATTCTC ATGTGTTTAG chr16:31613318-31613398 20 3.80e-05 TCTCCAGTAT GAATTCTC TGGTGGACAA chr5:150330308-150330388 23 3.80e-05 TTTCCAGTAT GAATTCTC ATATGTACAA chr6:27420318-27420398 38 3.80e-05 TCGCCAGTAT GAATTCTC TGATGCTGAA chr3:44763782-44763862 59 3.80e-05 GAACATTACA GAATTCAC ACTGGTGAGA chr12:133635005-13363508 68 3.80e-05 ACCCATCAGA GAATTCAC ACTGG chr19:37241108-37241188 11 3.80e-05 TCACCAGTAT GAATTCTC CAATGTTGAA chr19:52659418-52659498 44 3.80e-05 TCTCCAGTAT GAATTCTC CGATGCCCCA chr19:37619569-37619649 60 3.80e-05 CAACATCAGC GAATTCAC ACTGGAGAAA chr18:32833870-32833950 62 3.80e-05 TCTCCAGTAT GAATTCTC TGATGTCTAA chr1:247150576-247150656 37 3.80e-05 TGCCCAGTAT GAATTCTC TTATGCTGAA chr19:37310128-37310208 40 3.80e-05 TCACCAGTAT GAATTCTC TGATGCTGAG chr19:52977287-52977367 53 3.80e-05 TCTCCAGTAT GAATTCTC TGATGATTGC chr3:44762859-44762939 58 3.80e-05 CAACATCAAA GAATTCAC ACTGGAGTGA chr19:37734143-37734223 68 3.80e-05 AATCATCAGA GAATTCAC ACTGG chr22:22452956-22453036 16 6.64e-05 GGGTCTGTGT GAGTTCTC AGCAGCTGCC chr19:9639409-9639489 72 6.64e-05 TCTTCAGTGT GAGTTCTC A chr20:60685206-60685286 51 6.64e-05 aatagcgagt gagttctc atgaaatctg chr7:56754157-56754237 73 6.64e-05 CTTCCAGTAT GAGTTCTC chr1:23688740-23688820 69 6.64e-05 TCTCCAGTGT GAGTTCTC TGGT chr19:58490276-58490356 4 6.64e-05 TGT GAGTTCTC TGATGGGCAA chr19:52365353-52365433 60 6.64e-05 TTTCCTATAT GAGTTCTC TGATATACAA chr1:227885226-227885306 46 6.64e-05 TCCCCTGTGT GAGTTCTC TGATGCACCC chr20:45084911-45084991 60 6.64e-05 TCTCCCATGT GAGTTCTC CGATGTACTG chr2:65702275-65702355 37 6.64e-05 CAGTCTCTAT GAGTTCTC AGTGCAACAA chr15:72114085-72114165 10 6.64e-05 agtcagtag gagttctc caaagctggg chr9:99521482-99521562 18 6.64e-05 TCCCCAGTGT GAGTTCTC TGATGTATTC chr11:3380712-3380792 64 6.64e-05 TCTTCAGAAT GAGTTCTC TTATGGTTA chr19:19822278-19822358 71 6.64e-05 TCTCCCGTGT GAGTTCTC TC chr10:132080914-13208099 54 6.64e-05 ACCTCTTTGT GAGTTCTC TGATGTATAG chr6:149560865-149560945 8 6.64e-05 GAAGTGT GAGTTCtc actcaacaaa chr9:115759747-115759827 18 6.64e-05 TCTCCAGTAT GAGTTCTC TGGTGTTCAG chr7:62548077-62548157 56 6.64e-05 TTTCCAGTAT GAGTTCTC TTGTGTCCAG chr19:52364975-52365055 16 6.64e-05 TTTCCTGTGT GAGTTCTC TGGTGACCAA chr9:99580283-99580363 20 6.64e-05 TCCCCTGTGT GAGTTCTC TGATGTACTC chr19:44980802-44980882 17 6.64e-05 TCTCCAGTAT GAGTTCTC TGATGTTGAG chr19:38160399-38160479 69 6.64e-05 TCATTAGTAT GAGTTCTC TGGT chr19:52376561-52376641 60 6.64e-05 TCTCCTGTGT GAGTTCTC TGATGCTCAG chr6:27326570-27326650 52 6.64e-05 TCTCCAGTGT GAGTTCTC TGAAAATGTC chr12:6753271-6753351 59 6.64e-05 TCTCCAGTAG GAGTTCTC ATCATATATT chr5:150311106-150311186 61 6.64e-05 TCCCCAGTAT GAGTTCTC TGATGTGCAA chr7:57233278-57233358 31 6.64e-05 CTTCCAGTAT GAGTTCTC TTGCGTTCAG chr19:38055658-38055738 18 6.64e-05 TCTCCAGTAT GAGTTCTC AGATGTTCAG chr18:60356161-60356241 67 6.64e-05 TGGGAAGTAT GAGTTCTC TTCCTC chr9:125489222-125489302 67 6.64e-05 ATGACAGTAT GAGTTCTC AGTACC chr10:132081610-13208169 18 6.64e-05 TCTCCTGTGT GAGTTCTC TGATATACAG chr9:115805181-115805261 18 6.64e-05 TCCCCAGTAT GAGTTCTC TGATGTACAA chr19:52497538-52497618 31 6.64e-05 AGTTCTGTAT GAGTTCTC TGATGGTCCA chr8:18035669-18035749 23 9.43e-05 GGAGATGCAA GAACTCAC ACTGTATGTT chr1:40961133-40961213 57 9.43e-05 CAGCATCATA GAACTCAC ACTGGGGAGA chr19:14829490-14829570 58 9.43e-05 AGCCACGTGA GAACTCAC ACTGGAGAGA chr22:22517833-22517913 28 9.43e-05 GGATTTTTCT GAACTCAC AAACACTGAC chr1:213470545-213470625 19 9.43e-05 AGAGGACTGA GAACTCAC ACAGACTGAT chr12:120420883-12042096 13 9.43e-05 AGGAAGTTGG GAACTCAC ACTGTGTATC chr2:106823800-106823880 56 9.43e-05 CAACAACAGA GAACTCAC ACTGGAGAGG chr5:150275744-150275824 18 9.43e-05 TCCCCAGTGT GAACTCTC TGATGTATAA chrX:47918689-47918769 37 9.43e-05 TCTCTGGTAT GAACTCTC TGATGTATAA chr19:58708522-58708602 15 9.43e-05 GGGTGTCCCA GAACTCAC TGGCAAGGAT chr19:2834585-2834665 15 9.43e-05 CAGCACGAGC GAACTCAC ACGGGCGAGA chr19:9453516-9453596 65 9.43e-05 GTACACATGA GAACTCAC ACTGGTGA chr19:37211417-37211497 35 9.43e-05 GTACATCAGA GAACTCAC ACAGGTGAGA chr7:6714727-6714807 13 9.43e-05 GTGTATCAGA GAACTCAC ACTGGGGAGA chr8:196128-196208 35 9.43e-05 CGACATGAGA GAACTCAC ACTGGAGAGA chr20:60684515-60684595 15 9.43e-05 tccaatatca gaactcac tacaaagcta chrX:47272883-47272963 58 9.43e-05 GAACATCAGA GAACTCAC ATAGGCTGGT chr16:75203995-75204075 18 9.43e-05 CCTTTATCCA GAACTCAC AGCTCATCAT chr19:9492193-9492273 61 9.43e-05 GTGCACAAGA GAACTCAC ACTGGTGAGA chr13:90787910-90787990 44 1.15e-04 ggaccacaaa gagctctc tcactttctt chr19:19946341-19946421 36 1.95e-04 ACACATAAGA GAATTCAT ACTGGAGAGA chr19:38294219-38294299 13 1.95e-04 CAACATGACA GAATTCAT ACTGGTGAAA chr19:56935599-56935679 47 1.95e-04 CATCATGAGA GAATTCAT actatggagt chr5:140144041-140144121 37 1.95e-04 CACTATAAGA GAATTCAT ACTGTTGAAA chr4:155293-155373 6 1.95e-04 TAAGA GAATTCAT TCTGCACAAA chr4:367048-367128 2 1.95e-04 A GAATTCAT GCTGGAGAGA chr19:35434778-35434858 15 1.95e-04 AAGCATCAGA GAATTCAT ACTGGCGAGA chr19:52090426-52090506 54 1.95e-04 GCCCAACAGA GAATTCAT AGTGTAGGAA chr19:2834375-2834455 57 1.95e-04 CAGCATCAGA GGATTCAC ACCGGGGAAA chr19:19946656-19946736 57 1.95e-04 GAACATCAGA GAATTCAT ACTGGAGAGA chr16:31766623-31766703 56 1.95e-04 CAACATCAAA GAATTCAT ACCGGAGAGA chr17:4996001-4996081 36 1.95e-04 GTCCACCAGA GAATTCAT ACTGGAGAGA chr9:114304926-114305006 1 1.95e-04 . GAATTCAT ACTGGAGAGA chr10:42832489-42832569 73 2.55e-04 GAATTTGTAA GGGTTCTC chr19:12638252-12638332 15 2.55e-04 TCTCCAGTGT GAGTTCTT TCATGTATCT chr19:52418801-52418881 57 2.55e-04 TCTCCAGTAT GAGTTCTT TGATGGAAAG chr12:133502355-13350243 35 2.55e-04 TCTCCAGTAT GGGTTCTC TGATGATGAA chr19:44981023-44981103 48 2.55e-04 TCTCCAGTGT GAGTTCTT TGATGTGCAA chr1:247320199-247320279 43 2.55e-04 TCTCCAGTGT GAGTTCTT TCATGGTAAT chr19:38294010-38294090 54 2.55e-04 CAACATGGAA GAGTTCAT ACTGGTGAGA chr9:99580958-99581038 17 2.55e-04 TCCCCTGTGT GGGTTCTC TGGTGTATTC chr12:133503168-13350324 62 2.55e-04 TCTCCTGAGT GAGTTCTT TGATGAACCG chr2:27802558-27802638 31 3.53e-04 AAGAAAGTGA GGACTCAC AGAGTGATTC chr9:130206938-130207018 15 3.53e-04 AACCATCAGA GGACTCAC ACCGGGGAGA chr5:140638756-140638836 21 3.53e-04 GTGCACTAGA GAACTCAT GCTGCAGGGA chr4:368497-368577 41 3.53e-04 AACATAATGA GAACTCAT ACTGGAGGAA chr14:50938712-50938792 50 3.53e-04 ACACATGAGA GAACTCAT ACTGGTGATA chr7:111111227-111111307 10 3.53e-04 aattgaaga GGACTCAC AGATATTTCT chr16:68598350-68598430 58 3.53e-04 CAGCATGAGA GAACTCAT ACTGGAGAGA chr19:58724241-58724321 54 3.53e-04 CAGCACCTGA GGACTCAC ACTGGCGCTA chr3:13944389-13944469 41 3.53e-04 CAACATGTGA GAACTCAT ACAGGTGAAA chr5:178359592-178359672 11 3.53e-04 GTGCATCAGA GAACTCAT ACAGGAGAGA chr5:140640662-140640742 30 3.53e-04 CAGCAAGTGA GAACTCAT ACTGGGAGAT chr4:155875-155955 12 3.53e-04 CAACATAAGA GAACTCAT ACTGGAGGAA chr11:16452367-16452447 44 3.53e-04 tttctgctga gaactcat gtcacctttc chr7:63337177-63337257 8 3.53e-04 CACAAGA GAACTCAT ACTGAAGGAA chr12:133779967-13378004 32 3.53e-04 TCACACCAGA GAACTCAT GCAGGAGAGA chr3:44540787-44540867 17 3.53e-04 TCTCCAGTGT GGACTCTC TGGTGCACAG chr10:44020091-44020171 39 3.53e-04 TATCATCAGA GAACTCAT ACTGGAGAAA chr7:57342425-57342505 54 3.53e-04 AAACATAAGA GAACTCAT ACTGAAGGGA chr13:49548119-49548199 36 3.53e-04 TGTTCCCAGA GAACTCAT ACTGGTGCAC chr5:179685633-179685713 71 3.53e-04 ACACATGAGA GAACTCAT AC chr7:56534417-56534497 37 3.53e-04 GGACACAAGA GAACTCAT ACTGGAAGGA chr11:117958255-11795833 28 3.53e-04 ggcaagatga gaactcat actctccagg chr2:95880893-95880973 31 3.53e-04 CAGCACCAGA GAACTCAT ACTGGGGAGC chr4:437376-437456 69 3.81e-04 TCGCCAGTAT GAATCCTC TTAT chr19:58639557-58639637 53 3.81e-04 TCGCCAGTAT GAATCCTC TGATGCCTGA chr7:18289943-18290023 38 3.81e-04 AGTACAGTAT GAATCCTC AGTAAGACAA chr19:36884361-36884441 55 3.81e-04 TCACCAGTAT GAATCCTC TGATGCAGAG chr19:35250524-35250604 17 3.81e-04 TCTCCAGTGT GAATCCTC ATGTGCTGAG chr19:8922236-8922316 16 4.25e-04 TGTCAGATAG GAGCTCTT CCTGAAGGTT chr19:58619940-58620020 22 4.25e-04 ACAGGTATAA GGGCTCTC TCCAGTATGA chr19:35434991-35435071 54 5.36e-04 CAACATGGAA GACTTCAC ACTGGCGAGA chr3:44612411-44612491 71 5.36e-04 CGGCACCAGA GACTTCAC AC chr13:91654776-91654856 11 5.36e-04 gatgataagt gaattccc gctcagttag chr9:115759951-115760031 66 5.36e-04 TCCTCAGAAT GAATTCCC TGATGTT chr6:27326769-27326849 15 5.36e-04 TCTCCTGCGT GACTTCTC TGATGTTGAG chr19:36940085-36940165 54 5.36e-04 TCACCTGTAT GGATTCTT TGATGTTTAA chr19:37619196-37619276 13 5.36e-04 CGACACCAGA GGATTCAT ACTGGTGAGA chr7:56007367-56007447 1 5.36e-04 . GGATTCAT ACTGGAGAAA chr19:58639759-58639839 19 5.57e-04 TCTCCAGTGT GAGTCCTC TCATGCTGGG chr2:73941421-73941501 47 5.57e-04 gttgtagtgt gagtcctc caacattgtt chr16:57251038-57251118 6 5.57e-04 AGTAT GAGTCCTC ATAAGGACCT chr19:58619295-58619375 16 5.57e-04 TCACCAGTAT GAGTCCTC TGGTGCCAGA chr1:145038425-145038505 21 5.96e-04 gcatggcttt gagttccc tcctgtctct chr7:91910308-91910388 67 5.96e-04 caaagggaaa gggttcat ggagtg chr22:22084841-22084921 4 7.27e-04 CAT GAAGTCAC AGGTGTGGAA chr19:58724443-58724523 20 7.27e-04 GGGCACCAGA GAACCCAC AATAGGACAA chr19:53116647-53116727 56 7.27e-04 ACACTTATAA GGTTTCTC ACCGGCATGA chr19:52569953-52570033 67 7.27e-04 ACATTTGTAA GGTTTCTC TCCAGT chr5:14256292-14256372 64 7.27e-04 gaaacaacca ggtttcac atgaaccaa chr19:44981408-44981488 67 7.27e-04 ACACCTGTAA GGTTTCTC TCCAGT chr19:23159196-23159276 11 7.27e-04 ACATTTGTAG GGTTTCTC TCCAGCATGA chr19:37904585-37904665 1 7.27e-04 . GGTTTCTC CCCAGTATGA chr19:52418528-52418608 62 7.27e-04 GCAGTGATAC GGTTTCTC TCCTGTGTGA chr19:12125963-12126043 37 7.27e-04 ACATTCATAA GGTTTCTC TCCAGTGTGA chr19:44351515-44351595 2 7.27e-04 A GATTTCAT ACTGGTGAGA chr12:133635226-13363530 73 7.27e-04 CTTTCTCTCG GAAGTCAC chr2:95815325-95815405 45 7.27e-04 ACATTTGTAG GGTTTCTC TCCAGTGTGA chr19:12576169-12576249 67 7.27e-04 ACATTTATAG GGTTTCTC TCCAGT chr3:44763577-44763657 12 7.27e-04 CGGCACCAGA GAAGTCAC ACTGGAGAAA chr1:247201180-247201260 70 7.27e-04 ACATGCATAG GGTTTCTC TCC chr19:53740661-53740741 30 7.27e-04 ACATTTGTGT GGTTTCTC TCCAGGATGT chrX:47835722-47835802 58 7.27e-04 GCATGCATAG GGTTTCTC TCCCGTGTGC chr19:37210614-37210694 56 7.27e-04 CCTTCAGATT GAAGTCAC ACCTCATTCG chr7:92569277-92569357 64 7.87e-04 tcagtcacat gacctcac ctgactgca chr19:58678301-58678381 51 7.87e-04 GAACGTAAGA GGACTCAT ACTGGAGAAC chr12:133682383-13368246 22 7.87e-04 TTACACCAGA GGACTCAT ACTGGAGAGA chr18:32886663-32886743 61 8.82e-04 AAACATCGAA GGATCCAC ACTGGAGAGA chr17:16455442-16455522 6 8.82e-04 AGTAT GAATCCTT TGATGCTGAG chr5:178506444-178506524 32 8.82e-04 AGGCATCAAA GAATCCAT ACAGGTGAGA chr19:38055868-38055948 57 9.92e-04 TTCTCACCAT GAATTTTC TCATGTTGAG chr7:6731601-6731681 1 1.35e-03 . GGCTTCTC CCCTGTGTGT chr7:92498112-92498192 35 1.35e-03 CTAATTTTGG GGCTTCTC TCCTCTTTAA chr4:265482-265562 14 1.35e-03 TCTCCAGTAT GAATACTC TTATGTTTAT chr19:56952721-56952801 66 1.35e-03 GCATGTATAT GGCTTCTC TCCAGTG chr8:145933174-145933254 53 1.35e-03 CCTTTAGTGG GAATTCAA ACCTTATTAA chr15:25318051-25318131 3 1.35e-03 TG GGATTCCC AAGACCCACA chr1:247264072-247264152 17 1.44e-03 TCTCCAGTGT GAGTCCTT TCATGCGTCT chr1:40929013-40929093 43 1.44e-03 ATCCATCAGA GAGTCCAT ACTGGAGTAA chr19:58773816-58773896 27 1.44e-03 AGGCATCTGC AAATTCAC ACTGGGGAGA chr19:58490074-58490154 38 1.44e-03 TCTCCAGTAT GAGTCCTT TGATGTCTAA chr5:178392575-178392655 41 1.44e-03 CGACATCGGA AAATTCAC ACTGGAGAGA chr19:7083484-7083564 69 1.61e-03 TTTTCTCTTA CAATTCAC AGGA chr1:227842977-227843057 52 1.61e-03 AACCTTTACT CAATTCTC AAACCTCACT chr19:52978144-52978224 15 1.61e-03 TTTCTGTCCT GTATTCAC TCACTAATAC chr19:9406156-9406236 15 1.61e-03 TCTCTAGTGT GAGTTTTC ACATGCCTTC chr12:133697209-13369728 20 1.61e-03 TCTCCAGTGT GTATTCTC TTGTGCACTA chr3:75787517-75787597 8 1.78e-03 CCTGTGT GAGTTCTA TGATGTATTG chr5:140144644-140144724 33 1.78e-03 attcttttat gagttcaa tgcttttaca chr13:91589331-91589411 26 1.78e-03 aggtgagtgt gagttcag gatctattgc chr5:150275389-150275469 56 1.78e-03 GATGTGTAAT GAGTTCTG TCTTCCTGCT chr12:133780236-13378031 15 1.78e-03 GTACATAAAG GAGTGCAC ACTGGAGTAA chr8:146067784-146067864 64 1.78e-03 CCTTTGGTTG TAGTTCAC GGCTTATTC chr3:13943293-13943373 23 1.98e-03 TGTGCATAGA GAAGTCAT ACTGGAGAGA chr3:44776314-44776394 60 1.98e-03 CGTCATCAGA GAAGTCAT TCTGGAGATA chr16:31927462-31927542 63 1.98e-03 ACACATCAGA GAAGTCAT ACTGGAGAGA chr19:37129946-37130026 66 1.98e-03 ACATTCATAA GGTTTCTT GCCAGAA chr19:37038221-37038301 61 1.98e-03 GCATTCATAG GGTTTCTT ACCAGTATGA chr7:6715860-6715940 14 1.98e-03 ATACCAGGAA GAACCCTT TTGAGTGTAA chr9:99500774-99500854 56 2.13e-03 CTTTTAGGCA GAAATCAC ACTTCCAAGA chr17:16525840-16525920 40 2.13e-03 TCTCCAGTGT GTGTTCTC CAATGCACTG chr3:75786169-75786249 15 2.13e-03 TCTCCTGTGT GTGTTCTC TGATGTATAC chr2:133224209-133224289 33 2.35e-03 AGCTGAGTGA GAACTCCT ACTGTGTGCA chr6:27368940-27369020 15 2.35e-03 GAACATCAGA GAACACAC ACTGGGGAGA chr13:91821711-91821791 28 2.70e-03 AGTGTACTCA GGATCCTT GGTGGCAGGT chr16:68598054-68598134 45 2.70e-03 GACCATCAGA GGATCCAT ACTGCAGAGA chr7:146937457-146937537 58 2.98e-03 ACAAGGTGAT TAGCTCAC TACACATCTA chr2:95815532-95815612 63 3.41e-03 GAAGTGAAAG GACTTCCC ACACTCATTA chr10:44112424-44112504 20 3.41e-03 AGTCACCAAA GAATGCAT ACTGGGGAGA chr13:90850041-90850121 4 3.59e-03 TGT CAGCTCAC CTGTTTTCAA chr8:125989141-125989221 50 3.59e-03 GATTCAGCAG CAGCTCTC ACCTTATTCA chr17:4995645-4995725 56 3.59e-03 AGACACCAGA AAATTCAT ACTGGAGAAA chr19:12358571-12358651 39 4.24e-03 TCTCCAGTGT GAGTACTT TCATGTGCTT chr15:25318321-25318401 56 4.24e-03 TGGCTTATTG TGGTTCAC GGGTAACTGT chr19:52618967-52619047 59 4.24e-03 GCATTTATAA GCTTTCTC GCCGGTATGA chr22:23350213-23350293 33 4.67e-03 TCTCCTTTCT TATTTCTC CCATCTTAAC chr19:57089387-57089467 54 4.67e-03 CCTTCAGTCA GATTGCAC ACCTTGTTCA chr15:99373385-99373465 30 4.67e-03 CTGTCTTCTA GATTTCTA GAGCAGTGTT chr12:133732868-13373294 29 5.02e-03 ATCAGTGTGG GAAATCTT TTGTTCATAG chr8:125989346-125989426 39 5.37e-03 CGCCACCAGC GGACACAC ACAGGTGAGA chr16:31766824-31766904 23 5.37e-03 GTGCATCAGA TAACTCAT ACTGGAATGA chr13:91889932-91890012 68 5.37e-03 TCAGCTGTTT TAACTCAT ATACA chr19:52869749-52869829 21 5.37e-03 TGTGGAAGAG CATTTCAC AAGCGTCCGG chr6:27420534-27420614 12 5.37e-03 GGTTTATAAG GTTTTCAC TCCGGCTGAA chr5:179686044-179686124 40 5.37e-03 AGCTCCCTTT GAACACAT GAAAAATCTC chr5:178359378-178359458 20 5.37e-03 GTGTGGAAAA CATTTCAC TGGACGATCA chr12:133682992-13368307 59 6.07e-03 CCTTCAGCCG GAGCTTTT CCCTCATTCT chr13:90588942-90589022 48 6.53e-03 GGATTTGCAG GAATTtcc cccacaaagt chr22:22769748-22769828 46 6.53e-03 CTTAACAAGG GCCTTCAC GTTCTATCTT chr2:171767973-171768053 37 6.53e-03 gatacaatca tggctcac tgaagctttg chr8:145933383-145933463 23 7.25e-03 CCATCACACG TGATTCAT AATCAAAGGA chr5:150275160-150275240 40 7.25e-03 CGGAAGGTGG GACTTCTG AGAGAAGGCT chr19:35250270-35250350 2 7.92e-03 A GGGTTTTT GTCCACTGTG chr12:133500935-13350101 24 8.39e-03 agccctgcat gagttcca ggaattgttc chr3:75787108-75787188 65 8.39e-03 ACATGCGTAT GGTTTTTC CCCAGCAT chr3:75787824-75787904 21 8.39e-03 ACAGGCATAA GGTTTTTC CTCAGTAGGC chr19:53669041-53669121 4 8.39e-03 TAA GGTTTTTC TCCAGTATGG chr22:23254851-23254931 43 9.56e-03 TTTGTGATTT AATTTCAT TTCTATGTGG chr19:37368159-37368239 70 1.21e-02 CGACATCAGA TCATTCAC AGT chr1:161019448-161019528 56 1.34e-02 GTAGTCCCAG GAATACAA AGGTCAAGCC chr19:54080519-54080599 25 1.34e-02 GAAAGACTAC GAATGCAA AGACTGTGGG chr19:56935400-56935480 52 1.34e-02 CATTTAGCCA GAATGCAG GCCTTGCTCA chr13:91333791-91333871 52 1.34e-02 ggcttgtcac aaattttc agtttgtaaa chr2:102762565-102762645 44 1.34e-02 TAGCCATGCT GGTCTCTG CACATTTGGC chr7:105401243-105401323 1 1.99e-02 . aaaatcac atgtacagag chr13:90501810-90501890 48 2.09e-02 agatttgggt ggggacac agagtcaaat chr7:57529289-57529369 45 2.23e-02 GCAAAGCCTT TAGCTTAC CCTCAACCTT chr16:68597763-68597843 17 2.23e-02 CAGTGGAGAG AAGCCCTT CCAGTGTAAG chr5:140640065-140640145 31 2.37e-02 aggtgaattt gctctccc ttctggtcct chr1:246904708-246904788 65 2.52e-02 taattttata aaattttt gtagagat chr3:44541378-44541458 72 2.52e-02 CACACTCCTT ACATTCAT A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:99521720-99521800 3.8e-05 31_[+1]_41 chr22:36208864-36208944 3.8e-05 48_[+1]_24 chrX:47307728-47307808 3.8e-05 59_[+1]_13 chr19:40519867-40519947 3.8e-05 19_[+1]_53 chr1:247353354-247353434 3.8e-05 17_[+1]_55 chr12:133780438-13378051 3.8e-05 64_[+1]_8 chr7:64438580-64438660 3.8e-05 53_[+1]_19 chr19:37904877-37904957 3.8e-05 60_[+1]_12 chr9:115805523-115805603 3.8e-05 11_[+1]_61 chr16:31613318-31613398 3.8e-05 19_[+1]_53 chr5:150330308-150330388 3.8e-05 22_[+1]_50 chr6:27420318-27420398 3.8e-05 37_[+1]_35 chr3:44763782-44763862 3.8e-05 58_[+1]_14 chr12:133635005-13363508 3.8e-05 67_[+1]_5 chr19:37241108-37241188 3.8e-05 10_[+1]_62 chr19:52659418-52659498 3.8e-05 43_[+1]_29 chr19:37619569-37619649 3.8e-05 59_[+1]_13 chr18:32833870-32833950 3.8e-05 61_[+1]_11 chr1:247150576-247150656 3.8e-05 36_[+1]_36 chr19:37310128-37310208 3.8e-05 39_[+1]_33 chr19:52977287-52977367 3.8e-05 52_[+1]_20 chr3:44762859-44762939 3.8e-05 57_[+1]_15 chr19:37734143-37734223 3.8e-05 67_[+1]_5 chr22:22452956-22453036 6.6e-05 15_[+1]_57 chr19:9639409-9639489 6.6e-05 71_[+1]_1 chr20:60685206-60685286 6.6e-05 50_[+1]_22 chr7:56754157-56754237 6.6e-05 72_[+1] chr1:23688740-23688820 6.6e-05 68_[+1]_4 chr19:58490276-58490356 6.6e-05 3_[+1]_69 chr19:52365353-52365433 6.6e-05 59_[+1]_13 chr1:227885226-227885306 6.6e-05 45_[+1]_27 chr20:45084911-45084991 6.6e-05 59_[+1]_13 chr2:65702275-65702355 6.6e-05 36_[+1]_36 chr15:72114085-72114165 6.6e-05 9_[+1]_63 chr9:99521482-99521562 6.6e-05 17_[+1]_55 chr11:3380712-3380792 6.6e-05 63_[+1]_9 chr19:19822278-19822358 6.6e-05 70_[+1]_2 chr10:132080914-13208099 6.6e-05 53_[+1]_19 chr6:149560865-149560945 6.6e-05 7_[+1]_65 chr9:115759747-115759827 6.6e-05 17_[+1]_55 chr7:62548077-62548157 6.6e-05 55_[+1]_17 chr19:52364975-52365055 6.6e-05 15_[+1]_57 chr9:99580283-99580363 6.6e-05 19_[+1]_53 chr19:44980802-44980882 6.6e-05 16_[+1]_56 chr19:38160399-38160479 6.6e-05 68_[+1]_4 chr19:52376561-52376641 6.6e-05 59_[+1]_13 chr6:27326570-27326650 6.6e-05 51_[+1]_21 chr12:6753271-6753351 6.6e-05 58_[+1]_14 chr5:150311106-150311186 6.6e-05 60_[+1]_12 chr7:57233278-57233358 6.6e-05 30_[+1]_42 chr19:38055658-38055738 6.6e-05 17_[+1]_55 chr18:60356161-60356241 6.6e-05 66_[+1]_6 chr9:125489222-125489302 6.6e-05 66_[+1]_6 chr10:132081610-13208169 6.6e-05 17_[+1]_55 chr9:115805181-115805261 6.6e-05 17_[+1]_55 chr19:52497538-52497618 6.6e-05 30_[+1]_42 chr8:18035669-18035749 9.4e-05 22_[+1]_50 chr1:40961133-40961213 9.4e-05 56_[+1]_16 chr19:14829490-14829570 9.4e-05 57_[+1]_15 chr22:22517833-22517913 9.4e-05 27_[+1]_45 chr1:213470545-213470625 9.4e-05 18_[+1]_54 chr12:120420883-12042096 9.4e-05 12_[+1]_60 chr2:106823800-106823880 9.4e-05 55_[+1]_17 chr5:150275744-150275824 9.4e-05 17_[+1]_55 chrX:47918689-47918769 9.4e-05 36_[+1]_36 chr19:58708522-58708602 9.4e-05 14_[+1]_58 chr19:2834585-2834665 9.4e-05 14_[+1]_58 chr19:9453516-9453596 9.4e-05 64_[+1]_8 chr19:37211417-37211497 9.4e-05 34_[+1]_38 chr7:6714727-6714807 9.4e-05 12_[+1]_60 chr8:196128-196208 9.4e-05 34_[+1]_38 chr20:60684515-60684595 9.4e-05 14_[+1]_58 chrX:47272883-47272963 9.4e-05 57_[+1]_15 chr16:75203995-75204075 9.4e-05 17_[+1]_55 chr19:9492193-9492273 9.4e-05 60_[+1]_12 chr13:90787910-90787990 0.00012 43_[+1]_29 chr19:19946341-19946421 0.0002 35_[+1]_37 chr19:38294219-38294299 0.0002 12_[+1]_60 chr19:56935599-56935679 0.0002 46_[+1]_26 chr5:140144041-140144121 0.0002 36_[+1]_36 chr4:155293-155373 0.0002 5_[+1]_67 chr4:367048-367128 0.0002 1_[+1]_71 chr19:35434778-35434858 0.0002 14_[+1]_58 chr19:52090426-52090506 0.0002 53_[+1]_19 chr19:2834375-2834455 0.0002 56_[+1]_16 chr19:19946656-19946736 0.0002 56_[+1]_16 chr16:31766623-31766703 0.0002 55_[+1]_17 chr17:4996001-4996081 0.0002 35_[+1]_37 chr9:114304926-114305006 0.0002 [+1]_72 chr10:42832489-42832569 0.00026 72_[+1] chr19:12638252-12638332 0.00026 14_[+1]_58 chr19:52418801-52418881 0.00026 56_[+1]_16 chr12:133502355-13350243 0.00026 34_[+1]_38 chr19:44981023-44981103 0.00026 47_[+1]_25 chr1:247320199-247320279 0.00026 42_[+1]_30 chr19:38294010-38294090 0.00026 53_[+1]_19 chr9:99580958-99581038 0.00026 16_[+1]_56 chr12:133503168-13350324 0.00026 61_[+1]_11 chr2:27802558-27802638 0.00035 30_[+1]_42 chr9:130206938-130207018 0.00035 14_[+1]_58 chr5:140638756-140638836 0.00035 20_[+1]_52 chr4:368497-368577 0.00035 40_[+1]_32 chr14:50938712-50938792 0.00035 49_[+1]_23 chr7:111111227-111111307 0.00035 9_[+1]_63 chr16:68598350-68598430 0.00035 57_[+1]_15 chr19:58724241-58724321 0.00035 53_[+1]_19 chr3:13944389-13944469 0.00035 40_[+1]_32 chr5:178359592-178359672 0.00035 10_[+1]_62 chr5:140640662-140640742 0.00035 29_[+1]_43 chr4:155875-155955 0.00035 11_[+1]_61 chr11:16452367-16452447 0.00035 43_[+1]_29 chr7:63337177-63337257 0.00035 7_[+1]_65 chr12:133779967-13378004 0.00035 31_[+1]_41 chr3:44540787-44540867 0.00035 16_[+1]_56 chr10:44020091-44020171 0.00035 38_[+1]_34 chr7:57342425-57342505 0.00035 53_[+1]_19 chr13:49548119-49548199 0.00035 35_[+1]_37 chr5:179685633-179685713 0.00035 70_[+1]_2 chr7:56534417-56534497 0.00035 36_[+1]_36 chr11:117958255-11795833 0.00035 27_[+1]_45 chr2:95880893-95880973 0.00035 30_[+1]_42 chr4:437376-437456 0.00038 68_[+1]_4 chr19:58639557-58639637 0.00038 52_[+1]_20 chr7:18289943-18290023 0.00038 37_[+1]_35 chr19:36884361-36884441 0.00038 54_[+1]_18 chr19:35250524-35250604 0.00038 16_[+1]_56 chr19:8922236-8922316 0.00043 15_[+1]_57 chr19:58619940-58620020 0.00043 21_[+1]_51 chr19:35434991-35435071 0.00054 53_[+1]_19 chr3:44612411-44612491 0.00054 70_[+1]_2 chr13:91654776-91654856 0.00054 10_[+1]_62 chr9:115759951-115760031 0.00054 65_[+1]_7 chr6:27326769-27326849 0.00054 14_[+1]_58 chr19:36940085-36940165 0.00054 53_[+1]_19 chr19:37619196-37619276 0.00054 12_[+1]_60 chr7:56007367-56007447 0.00054 [+1]_72 chr19:58639759-58639839 0.00056 18_[+1]_54 chr2:73941421-73941501 0.00056 46_[+1]_26 chr16:57251038-57251118 0.00056 5_[+1]_67 chr19:58619295-58619375 0.00056 15_[+1]_57 chr1:145038425-145038505 0.0006 20_[+1]_52 chr7:91910308-91910388 0.0006 66_[+1]_6 chr22:22084841-22084921 0.00073 3_[+1]_69 chr19:58724443-58724523 0.00073 19_[+1]_53 chr19:53116647-53116727 0.00073 55_[+1]_17 chr19:52569953-52570033 0.00073 66_[+1]_6 chr5:14256292-14256372 0.00073 63_[+1]_9 chr19:44981408-44981488 0.00073 66_[+1]_6 chr19:23159196-23159276 0.00073 10_[+1]_62 chr19:37904585-37904665 0.00073 [+1]_72 chr19:52418528-52418608 0.00073 61_[+1]_11 chr19:12125963-12126043 0.00073 36_[+1]_36 chr19:44351515-44351595 0.00073 1_[+1]_71 chr12:133635226-13363530 0.00073 72_[+1] chr2:95815325-95815405 0.00073 44_[+1]_28 chr19:12576169-12576249 0.00073 66_[+1]_6 chr3:44763577-44763657 0.00073 11_[+1]_61 chr1:247201180-247201260 0.00073 69_[+1]_3 chr19:53740661-53740741 0.00073 29_[+1]_43 chrX:47835722-47835802 0.00073 57_[+1]_15 chr19:37210614-37210694 0.00073 55_[+1]_17 chr7:92569277-92569357 0.00079 63_[+1]_9 chr19:58678301-58678381 0.00079 50_[+1]_22 chr12:133682383-13368246 0.00079 21_[+1]_51 chr18:32886663-32886743 0.00088 60_[+1]_12 chr17:16455442-16455522 0.00088 5_[+1]_67 chr5:178506444-178506524 0.00088 31_[+1]_41 chr19:38055868-38055948 0.00099 56_[+1]_16 chr7:6731601-6731681 0.0013 [+1]_72 chr7:92498112-92498192 0.0013 34_[+1]_38 chr4:265482-265562 0.0013 13_[+1]_59 chr19:56952721-56952801 0.0013 65_[+1]_7 chr8:145933174-145933254 0.0013 52_[+1]_20 chr15:25318051-25318131 0.0013 2_[+1]_70 chr1:247264072-247264152 0.0014 16_[+1]_56 chr1:40929013-40929093 0.0014 42_[+1]_30 chr19:58773816-58773896 0.0014 26_[+1]_46 chr19:58490074-58490154 0.0014 37_[+1]_35 chr5:178392575-178392655 0.0014 40_[+1]_32 chr19:7083484-7083564 0.0016 68_[+1]_4 chr1:227842977-227843057 0.0016 51_[+1]_21 chr19:52978144-52978224 0.0016 14_[+1]_58 chr19:9406156-9406236 0.0016 14_[+1]_58 chr12:133697209-13369728 0.0016 19_[+1]_53 chr3:75787517-75787597 0.0018 7_[+1]_65 chr5:140144644-140144724 0.0018 32_[+1]_40 chr13:91589331-91589411 0.0018 25_[+1]_47 chr5:150275389-150275469 0.0018 55_[+1]_17 chr12:133780236-13378031 0.0018 14_[+1]_58 chr8:146067784-146067864 0.0018 63_[+1]_9 chr3:13943293-13943373 0.002 22_[+1]_50 chr3:44776314-44776394 0.002 59_[+1]_13 chr16:31927462-31927542 0.002 62_[+1]_10 chr19:37129946-37130026 0.002 65_[+1]_7 chr19:37038221-37038301 0.002 60_[+1]_12 chr7:6715860-6715940 0.002 13_[+1]_59 chr9:99500774-99500854 0.0021 55_[+1]_17 chr17:16525840-16525920 0.0021 39_[+1]_33 chr3:75786169-75786249 0.0021 14_[+1]_58 chr2:133224209-133224289 0.0023 32_[+1]_40 chr6:27368940-27369020 0.0023 14_[+1]_58 chr13:91821711-91821791 0.0027 27_[+1]_45 chr16:68598054-68598134 0.0027 44_[+1]_28 chr7:146937457-146937537 0.003 57_[+1]_15 chr2:95815532-95815612 0.0034 62_[+1]_10 chr10:44112424-44112504 0.0034 19_[+1]_53 chr13:90850041-90850121 0.0036 3_[+1]_69 chr8:125989141-125989221 0.0036 49_[+1]_23 chr17:4995645-4995725 0.0036 55_[+1]_17 chr19:12358571-12358651 0.0042 38_[+1]_34 chr15:25318321-25318401 0.0042 55_[+1]_17 chr19:52618967-52619047 0.0042 58_[+1]_14 chr22:23350213-23350293 0.0047 32_[+1]_40 chr19:57089387-57089467 0.0047 53_[+1]_19 chr15:99373385-99373465 0.0047 29_[+1]_43 chr12:133732868-13373294 0.005 28_[+1]_44 chr8:125989346-125989426 0.0054 38_[+1]_34 chr16:31766824-31766904 0.0054 22_[+1]_50 chr13:91889932-91890012 0.0054 67_[+1]_5 chr19:52869749-52869829 0.0054 20_[+1]_52 chr6:27420534-27420614 0.0054 11_[+1]_61 chr5:179686044-179686124 0.0054 39_[+1]_33 chr5:178359378-178359458 0.0054 19_[+1]_53 chr12:133682992-13368307 0.0061 58_[+1]_14 chr13:90588942-90589022 0.0065 47_[+1]_25 chr22:22769748-22769828 0.0065 45_[+1]_27 chr2:171767973-171768053 0.0065 36_[+1]_36 chr8:145933383-145933463 0.0072 22_[+1]_50 chr5:150275160-150275240 0.0072 39_[+1]_33 chr19:35250270-35250350 0.0079 1_[+1]_71 chr12:133500935-13350101 0.0084 23_[+1]_49 chr3:75787108-75787188 0.0084 64_[+1]_8 chr3:75787824-75787904 0.0084 20_[+1]_52 chr19:53669041-53669121 0.0084 3_[+1]_69 chr22:23254851-23254931 0.0096 42_[+1]_30 chr19:37368159-37368239 0.012 69_[+1]_3 chr1:161019448-161019528 0.013 55_[+1]_17 chr19:54080519-54080599 0.013 24_[+1]_48 chr19:56935400-56935480 0.013 51_[+1]_21 chr13:91333791-91333871 0.013 51_[+1]_21 chr2:102762565-102762645 0.013 43_[+1]_29 chr7:105401243-105401323 0.02 [+1]_72 chr13:90501810-90501890 0.021 47_[+1]_25 chr7:57529289-57529369 0.022 44_[+1]_28 chr16:68597763-68597843 0.022 16_[+1]_56 chr5:140640065-140640145 0.024 30_[+1]_42 chr1:246904708-246904788 0.025 64_[+1]_8 chr3:44541378-44541458 0.025 71_[+1]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GARTTCWC width=8 seqs=248 chr9:99521720-99521800 ( 32) GAATTCTC 1 chr22:36208864-36208944 ( 49) GAATTCTC 1 chrX:47307728-47307808 ( 60) GAATTCTC 1 chr19:40519867-40519947 ( 20) GAATTCAC 1 chr1:247353354-247353434 ( 18) GAATTCTC 1 chr12:133780438-13378051 ( 65) GAATTCAC 1 chr7:64438580-64438660 ( 54) GAATTCTC 1 chr19:37904877-37904957 ( 61) GAATTCTC 1 chr9:115805523-115805603 ( 12) GAATTCTC 1 chr16:31613318-31613398 ( 20) GAATTCTC 1 chr5:150330308-150330388 ( 23) GAATTCTC 1 chr6:27420318-27420398 ( 38) GAATTCTC 1 chr3:44763782-44763862 ( 59) GAATTCAC 1 chr12:133635005-13363508 ( 68) GAATTCAC 1 chr19:37241108-37241188 ( 11) GAATTCTC 1 chr19:52659418-52659498 ( 44) GAATTCTC 1 chr19:37619569-37619649 ( 60) GAATTCAC 1 chr18:32833870-32833950 ( 62) GAATTCTC 1 chr1:247150576-247150656 ( 37) GAATTCTC 1 chr19:37310128-37310208 ( 40) GAATTCTC 1 chr19:52977287-52977367 ( 53) GAATTCTC 1 chr3:44762859-44762939 ( 58) GAATTCAC 1 chr19:37734143-37734223 ( 68) GAATTCAC 1 chr22:22452956-22453036 ( 16) GAGTTCTC 1 chr19:9639409-9639489 ( 72) GAGTTCTC 1 chr20:60685206-60685286 ( 51) GAGTTCTC 1 chr7:56754157-56754237 ( 73) GAGTTCTC 1 chr1:23688740-23688820 ( 69) GAGTTCTC 1 chr19:58490276-58490356 ( 4) GAGTTCTC 1 chr19:52365353-52365433 ( 60) GAGTTCTC 1 chr1:227885226-227885306 ( 46) GAGTTCTC 1 chr20:45084911-45084991 ( 60) GAGTTCTC 1 chr2:65702275-65702355 ( 37) GAGTTCTC 1 chr15:72114085-72114165 ( 10) GAGTTCTC 1 chr9:99521482-99521562 ( 18) GAGTTCTC 1 chr11:3380712-3380792 ( 64) GAGTTCTC 1 chr19:19822278-19822358 ( 71) GAGTTCTC 1 chr10:132080914-13208099 ( 54) GAGTTCTC 1 chr6:149560865-149560945 ( 8) GAGTTCTC 1 chr9:115759747-115759827 ( 18) GAGTTCTC 1 chr7:62548077-62548157 ( 56) GAGTTCTC 1 chr19:52364975-52365055 ( 16) GAGTTCTC 1 chr9:99580283-99580363 ( 20) GAGTTCTC 1 chr19:44980802-44980882 ( 17) GAGTTCTC 1 chr19:38160399-38160479 ( 69) GAGTTCTC 1 chr19:52376561-52376641 ( 60) GAGTTCTC 1 chr6:27326570-27326650 ( 52) GAGTTCTC 1 chr12:6753271-6753351 ( 59) GAGTTCTC 1 chr5:150311106-150311186 ( 61) GAGTTCTC 1 chr7:57233278-57233358 ( 31) GAGTTCTC 1 chr19:38055658-38055738 ( 18) GAGTTCTC 1 chr18:60356161-60356241 ( 67) GAGTTCTC 1 chr9:125489222-125489302 ( 67) GAGTTCTC 1 chr10:132081610-13208169 ( 18) GAGTTCTC 1 chr9:115805181-115805261 ( 18) GAGTTCTC 1 chr19:52497538-52497618 ( 31) GAGTTCTC 1 chr8:18035669-18035749 ( 23) GAACTCAC 1 chr1:40961133-40961213 ( 57) GAACTCAC 1 chr19:14829490-14829570 ( 58) GAACTCAC 1 chr22:22517833-22517913 ( 28) GAACTCAC 1 chr1:213470545-213470625 ( 19) GAACTCAC 1 chr12:120420883-12042096 ( 13) GAACTCAC 1 chr2:106823800-106823880 ( 56) GAACTCAC 1 chr5:150275744-150275824 ( 18) GAACTCTC 1 chrX:47918689-47918769 ( 37) GAACTCTC 1 chr19:58708522-58708602 ( 15) GAACTCAC 1 chr19:2834585-2834665 ( 15) GAACTCAC 1 chr19:9453516-9453596 ( 65) GAACTCAC 1 chr19:37211417-37211497 ( 35) GAACTCAC 1 chr7:6714727-6714807 ( 13) GAACTCAC 1 chr8:196128-196208 ( 35) GAACTCAC 1 chr20:60684515-60684595 ( 15) GAACTCAC 1 chrX:47272883-47272963 ( 58) GAACTCAC 1 chr16:75203995-75204075 ( 18) GAACTCAC 1 chr19:9492193-9492273 ( 61) GAACTCAC 1 chr13:90787910-90787990 ( 44) GAGCTCTC 1 chr19:19946341-19946421 ( 36) GAATTCAT 1 chr19:38294219-38294299 ( 13) GAATTCAT 1 chr19:56935599-56935679 ( 47) GAATTCAT 1 chr5:140144041-140144121 ( 37) GAATTCAT 1 chr4:155293-155373 ( 6) GAATTCAT 1 chr4:367048-367128 ( 2) GAATTCAT 1 chr19:35434778-35434858 ( 15) GAATTCAT 1 chr19:52090426-52090506 ( 54) GAATTCAT 1 chr19:2834375-2834455 ( 57) GGATTCAC 1 chr19:19946656-19946736 ( 57) GAATTCAT 1 chr16:31766623-31766703 ( 56) GAATTCAT 1 chr17:4996001-4996081 ( 36) GAATTCAT 1 chr9:114304926-114305006 ( 1) GAATTCAT 1 chr10:42832489-42832569 ( 73) GGGTTCTC 1 chr19:12638252-12638332 ( 15) GAGTTCTT 1 chr19:52418801-52418881 ( 57) GAGTTCTT 1 chr12:133502355-13350243 ( 35) GGGTTCTC 1 chr19:44981023-44981103 ( 48) GAGTTCTT 1 chr1:247320199-247320279 ( 43) GAGTTCTT 1 chr19:38294010-38294090 ( 54) GAGTTCAT 1 chr9:99580958-99581038 ( 17) GGGTTCTC 1 chr12:133503168-13350324 ( 62) GAGTTCTT 1 chr2:27802558-27802638 ( 31) GGACTCAC 1 chr9:130206938-130207018 ( 15) GGACTCAC 1 chr5:140638756-140638836 ( 21) GAACTCAT 1 chr4:368497-368577 ( 41) GAACTCAT 1 chr14:50938712-50938792 ( 50) GAACTCAT 1 chr7:111111227-111111307 ( 10) GGACTCAC 1 chr16:68598350-68598430 ( 58) GAACTCAT 1 chr19:58724241-58724321 ( 54) GGACTCAC 1 chr3:13944389-13944469 ( 41) GAACTCAT 1 chr5:178359592-178359672 ( 11) GAACTCAT 1 chr5:140640662-140640742 ( 30) GAACTCAT 1 chr4:155875-155955 ( 12) GAACTCAT 1 chr11:16452367-16452447 ( 44) GAACTCAT 1 chr7:63337177-63337257 ( 8) GAACTCAT 1 chr12:133779967-13378004 ( 32) GAACTCAT 1 chr3:44540787-44540867 ( 17) GGACTCTC 1 chr10:44020091-44020171 ( 39) GAACTCAT 1 chr7:57342425-57342505 ( 54) GAACTCAT 1 chr13:49548119-49548199 ( 36) GAACTCAT 1 chr5:179685633-179685713 ( 71) GAACTCAT 1 chr7:56534417-56534497 ( 37) GAACTCAT 1 chr11:117958255-11795833 ( 28) GAACTCAT 1 chr2:95880893-95880973 ( 31) GAACTCAT 1 chr4:437376-437456 ( 69) GAATCCTC 1 chr19:58639557-58639637 ( 53) GAATCCTC 1 chr7:18289943-18290023 ( 38) GAATCCTC 1 chr19:36884361-36884441 ( 55) GAATCCTC 1 chr19:35250524-35250604 ( 17) GAATCCTC 1 chr19:8922236-8922316 ( 16) GAGCTCTT 1 chr19:58619940-58620020 ( 22) GGGCTCTC 1 chr19:35434991-35435071 ( 54) GACTTCAC 1 chr3:44612411-44612491 ( 71) GACTTCAC 1 chr13:91654776-91654856 ( 11) GAATTCCC 1 chr9:115759951-115760031 ( 66) GAATTCCC 1 chr6:27326769-27326849 ( 15) GACTTCTC 1 chr19:36940085-36940165 ( 54) GGATTCTT 1 chr19:37619196-37619276 ( 13) GGATTCAT 1 chr7:56007367-56007447 ( 1) GGATTCAT 1 chr19:58639759-58639839 ( 19) GAGTCCTC 1 chr2:73941421-73941501 ( 47) GAGTCCTC 1 chr16:57251038-57251118 ( 6) GAGTCCTC 1 chr19:58619295-58619375 ( 16) GAGTCCTC 1 chr1:145038425-145038505 ( 21) GAGTTCCC 1 chr7:91910308-91910388 ( 67) GGGTTCAT 1 chr22:22084841-22084921 ( 4) GAAGTCAC 1 chr19:58724443-58724523 ( 20) GAACCCAC 1 chr19:53116647-53116727 ( 56) GGTTTCTC 1 chr19:52569953-52570033 ( 67) GGTTTCTC 1 chr5:14256292-14256372 ( 64) GGTTTCAC 1 chr19:44981408-44981488 ( 67) GGTTTCTC 1 chr19:23159196-23159276 ( 11) GGTTTCTC 1 chr19:37904585-37904665 ( 1) GGTTTCTC 1 chr19:52418528-52418608 ( 62) GGTTTCTC 1 chr19:12125963-12126043 ( 37) GGTTTCTC 1 chr19:44351515-44351595 ( 2) GATTTCAT 1 chr12:133635226-13363530 ( 73) GAAGTCAC 1 chr2:95815325-95815405 ( 45) GGTTTCTC 1 chr19:12576169-12576249 ( 67) GGTTTCTC 1 chr3:44763577-44763657 ( 12) GAAGTCAC 1 chr1:247201180-247201260 ( 70) GGTTTCTC 1 chr19:53740661-53740741 ( 30) GGTTTCTC 1 chrX:47835722-47835802 ( 58) GGTTTCTC 1 chr19:37210614-37210694 ( 56) GAAGTCAC 1 chr7:92569277-92569357 ( 64) GACCTCAC 1 chr19:58678301-58678381 ( 51) GGACTCAT 1 chr12:133682383-13368246 ( 22) GGACTCAT 1 chr18:32886663-32886743 ( 61) GGATCCAC 1 chr17:16455442-16455522 ( 6) GAATCCTT 1 chr5:178506444-178506524 ( 32) GAATCCAT 1 chr19:38055868-38055948 ( 57) GAATTTTC 1 chr7:6731601-6731681 ( 1) GGCTTCTC 1 chr7:92498112-92498192 ( 35) GGCTTCTC 1 chr4:265482-265562 ( 14) GAATACTC 1 chr19:56952721-56952801 ( 66) GGCTTCTC 1 chr8:145933174-145933254 ( 53) GAATTCAA 1 chr15:25318051-25318131 ( 3) GGATTCCC 1 chr1:247264072-247264152 ( 17) GAGTCCTT 1 chr1:40929013-40929093 ( 43) GAGTCCAT 1 chr19:58773816-58773896 ( 27) AAATTCAC 1 chr19:58490074-58490154 ( 38) GAGTCCTT 1 chr5:178392575-178392655 ( 41) AAATTCAC 1 chr19:7083484-7083564 ( 69) CAATTCAC 1 chr1:227842977-227843057 ( 52) CAATTCTC 1 chr19:52978144-52978224 ( 15) GTATTCAC 1 chr19:9406156-9406236 ( 15) GAGTTTTC 1 chr12:133697209-13369728 ( 20) GTATTCTC 1 chr3:75787517-75787597 ( 8) GAGTTCTA 1 chr5:140144644-140144724 ( 33) GAGTTCAA 1 chr13:91589331-91589411 ( 26) GAGTTCAG 1 chr5:150275389-150275469 ( 56) GAGTTCTG 1 chr12:133780236-13378031 ( 15) GAGTGCAC 1 chr8:146067784-146067864 ( 64) TAGTTCAC 1 chr3:13943293-13943373 ( 23) GAAGTCAT 1 chr3:44776314-44776394 ( 60) GAAGTCAT 1 chr16:31927462-31927542 ( 63) GAAGTCAT 1 chr19:37129946-37130026 ( 66) GGTTTCTT 1 chr19:37038221-37038301 ( 61) GGTTTCTT 1 chr7:6715860-6715940 ( 14) GAACCCTT 1 chr9:99500774-99500854 ( 56) GAAATCAC 1 chr17:16525840-16525920 ( 40) GTGTTCTC 1 chr3:75786169-75786249 ( 15) GTGTTCTC 1 chr2:133224209-133224289 ( 33) GAACTCCT 1 chr6:27368940-27369020 ( 15) GAACACAC 1 chr13:91821711-91821791 ( 28) GGATCCTT 1 chr16:68598054-68598134 ( 45) GGATCCAT 1 chr7:146937457-146937537 ( 58) TAGCTCAC 1 chr2:95815532-95815612 ( 63) GACTTCCC 1 chr10:44112424-44112504 ( 20) GAATGCAT 1 chr13:90850041-90850121 ( 4) CAGCTCAC 1 chr8:125989141-125989221 ( 50) CAGCTCTC 1 chr17:4995645-4995725 ( 56) AAATTCAT 1 chr19:12358571-12358651 ( 39) GAGTACTT 1 chr15:25318321-25318401 ( 56) TGGTTCAC 1 chr19:52618967-52619047 ( 59) GCTTTCTC 1 chr22:23350213-23350293 ( 33) TATTTCTC 1 chr19:57089387-57089467 ( 54) GATTGCAC 1 chr15:99373385-99373465 ( 30) GATTTCTA 1 chr12:133732868-13373294 ( 29) GAAATCTT 1 chr8:125989346-125989426 ( 39) GGACACAC 1 chr16:31766824-31766904 ( 23) TAACTCAT 1 chr13:91889932-91890012 ( 68) TAACTCAT 1 chr19:52869749-52869829 ( 21) CATTTCAC 1 chr6:27420534-27420614 ( 12) GTTTTCAC 1 chr5:179686044-179686124 ( 40) GAACACAT 1 chr5:178359378-178359458 ( 20) CATTTCAC 1 chr12:133682992-13368307 ( 59) GAGCTTTT 1 chr13:90588942-90589022 ( 48) GAATTTCC 1 chr22:22769748-22769828 ( 46) GCCTTCAC 1 chr2:171767973-171768053 ( 37) TGGCTCAC 1 chr8:145933383-145933463 ( 23) TGATTCAT 1 chr5:150275160-150275240 ( 40) GACTTCTG 1 chr19:35250270-35250350 ( 2) GGGTTTTT 1 chr12:133500935-13350101 ( 24) GAGTTCCA 1 chr3:75787108-75787188 ( 65) GGTTTTTC 1 chr3:75787824-75787904 ( 21) GGTTTTTC 1 chr19:53669041-53669121 ( 4) GGTTTTTC 1 chr22:23254851-23254931 ( 43) AATTTCAT 1 chr19:37368159-37368239 ( 70) TCATTCAC 1 chr1:161019448-161019528 ( 56) GAATACAA 1 chr19:54080519-54080599 ( 25) GAATGCAA 1 chr19:56935400-56935480 ( 52) GAATGCAG 1 chr13:91333791-91333871 ( 52) AAATTTTC 1 chr2:102762565-102762645 ( 44) GGTCTCTG 1 chr7:105401243-105401323 ( 1) AAAATCAC 1 chr13:90501810-90501890 ( 48) GGGGACAC 1 chr7:57529289-57529369 ( 45) TAGCTTAC 1 chr16:68597763-68597843 ( 17) AAGCCCTT 1 chr5:140640065-140640145 ( 31) GCTCTCCC 1 chr1:246904708-246904788 ( 65) AAATTTTT 1 chr3:44541378-44541458 ( 72) ACATTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.17227 E= 1.7e-123 -296 -315 209 -286 144 -341 -13 -385 94 -241 52 -132 -454 29 -271 125 -332 -141 -339 158 -1460 215 -1460 -272 76 -257 -1460 74 -332 162 -339 -1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 248 E= 1.7e-123 0.036290 0.024194 0.899194 0.040323 0.766129 0.020161 0.193548 0.020161 0.540323 0.040323 0.302419 0.116935 0.012097 0.262097 0.032258 0.693548 0.028226 0.080645 0.020161 0.870968 0.000000 0.955645 0.000000 0.044355 0.475806 0.036290 0.000000 0.487903 0.028226 0.661290 0.020161 0.290323 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GARTTCWC MEME-1 regular expression -------------------------------------------------------------------------------- GA[AG][TC]TC[TA][CT] -------------------------------------------------------------------------------- Time 5.10 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAGSCTT MEME-2 width = 8 sites = 168 llr = 1156 E-value = 2.9e-096 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 7a92:::: pos.-specific C ::::672: probability G 3:173::: matrix T :::1:28a bits 2.2 2.0 1.8 * * 1.6 * * Relative 1.3 ** * Entropy 1.1 ** *** (9.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAGCCTT consensus G AGT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:57529289-57529369 37 1.86e-05 AGAATGTGGC AAAGCCTT TAGCTTACCC chr1:40961133-40961213 17 1.86e-05 GGAATGTGGG AAAGCCTT CAGACATCGC chr19:14829490-14829570 18 1.86e-05 AGATTGTGGG AAAGCCTT CAATCAGCCA chr19:58639759-58639839 57 1.86e-05 GCCGTCCCGG AAAGCCTT TCCACATTTG chr19:37368159-37368239 30 1.86e-05 GGAATGTGGG AAAGCCTT TAGTTTTGGA chr4:155293-155373 50 1.86e-05 AGAATGTGGT AAAGCCTT TAAGTGGTCC chr3:44776314-44776394 20 1.86e-05 AGAATGTGGC AAAGCCTT CAGTCAGAGC chr16:68598350-68598430 18 1.86e-05 TGACTGTGGG AAAGCCTT TAGTCAAAGT chr19:52418528-52418608 31 1.86e-05 ACTTTACACT AAAGCCTT TTCCACATTC chr1:40929013-40929093 3 1.86e-05 GG AAAGCCTT TAGCCAGAGA chr19:38160399-38160479 23 1.86e-05 ACTTTGCCTA AAAGCCTT TTTACATTCC chr16:31927462-31927542 23 1.86e-05 AGAATGTGGC AAAGCCTT CAACTATAGG chr19:37129946-37130026 36 1.86e-05 GCCATCACAA AAAGCCTT CCCACATTCA chr19:58773816-58773896 71 1.86e-05 TCAGTGCAAT AAAGCCTT TG chr17:4995645-4995725 16 1.86e-05 TGAGTGTGGC AAAGCCTT CAAGCATAGC chr19:2834375-2834455 17 1.86e-05 TGAGTGCGGG AAAGCCTT CAACAGGATC chr19:36940085-36940165 8 1.86e-05 AGAACGA AAAGCCTT TTCACATTCC chr5:178359592-178359672 55 1.86e-05 TGAATGCGGA AAAGCCTT CAGCCGGAGT chr19:19946656-19946736 17 1.86e-05 AGTGTGTGGC AAAGCCTT TACTGCATCC chr16:31766623-31766703 16 1.86e-05 AGAATGTGGC AAAGCCTT TAATTGTAGT chr19:12576169-12576249 37 1.86e-05 GGGCCAACTG AAAGCCTT ACCACACTGT chr8:145933174-145933254 39 1.86e-05 TGAATGTGAC AAAGCCTT TAGTGGGAAT chr19:37619569-37619649 20 1.86e-05 GGAATGTGGG AAAGCCTT TATTCGTGGT chr9:114304926-114305006 45 1.86e-05 CGAATGTGGA AAAGCCTT TAGGCAGAAT chr16:68597763-68597843 44 1.86e-05 GGAATGTGGG AAAGCCTT TAGTCGATGT chr5:150311106-150311186 14 1.86e-05 ATTTCTGAGA AAAGCCTT TTCCACATTC chr19:38055658-38055738 56 1.86e-05 GCCACGAATA AAAGCCTT CCCACACTGT chr12:133682992-13368307 45 1.86e-05 TGAATGTGAT AAAGCCTT CAGCCGGAGC chr8:146067784-146067864 50 1.86e-05 CAAGTGTACA AAAGCCTT TGGTTGTAGT chr3:44762859-44762939 18 1.86e-05 GGAATGTGGG AAAGCCTT TAGTCGTAGT chr19:37734143-37734223 28 1.86e-05 GGAATGTGGC AAAGCCTT TAGTAGTGGC chr19:35250270-35250350 57 1.86e-05 GTGGTGTGTA AAAGCCTT TCCACATTCA chr10:42832489-42832569 42 3.70e-05 ACAACCAATA AAAGGCTT TACCACATTC chr1:247353354-247353434 36 3.70e-05 TTATGGTTTG AAAGGCTT GAACAAGATA chr19:12638252-12638332 52 3.70e-05 TTGGGCGATC AAAGGCTT TCCCACATTC chr4:437376-437456 22 3.70e-05 TGGAAATATT AAAGGCTT TACCACATTC chr9:115805523-115805603 49 3.70e-05 AGCTATACTT AAAGGCTT TTCCACATTC chr4:265482-265562 51 3.70e-05 CGGATTGTCT AAAGGCTT TGCCACATTG chr19:23159196-23159276 64 3.70e-05 AGGCCTTACT AAAGGCTT TGCCACATT chr6:27326769-27326849 52 3.70e-05 TGCTTCTGCT AAAGGCTT TTCCACATTG chr19:12125963-12126043 6 3.70e-05 GATCC AAAGGCTT TCCCACACTG chr19:36884361-36884441 8 3.70e-05 ACTGTCT AAAGGCTT TTCCACACTC chr3:44540787-44540867 54 3.70e-05 AGCTGTCACT AAAGGCTT TCCCACAACT chr5:179685633-179685713 31 3.70e-05 AAAATGGGAT AAAGGCTT CAGTCGGTTC chr19:9406156-9406236 52 3.70e-05 CAGGACAAAC AAAGGCTT TCCCACATTC chr19:53669041-53669121 57 3.70e-05 AACGAACAGT AAAGGCTT TGCCACACTT chr9:115805181-115805261 55 3.70e-05 ACTTTTGGCT AAAGGCTT TCCCACATTC chr12:133635226-13363530 31 5.09e-05 ATACAGGAGA GAAGCCTT TTGAATGCAG chr12:133779967-13378004 48 5.09e-05 ATGCAGGAGA GAAGCCTT ATGAATGCAC chr7:57233278-57233358 68 5.09e-05 AGCCCTGGTT GAAGCCTT CGGCA chr6:27420534-27420614 27 6.46e-05 CACTCCGGCT GAAGGCTT TTTCACATTC chr19:37904877-37904957 14 6.46e-05 CCTTGTGACT GAAGGCTT TTCTACAGTT chr5:150275744-150275824 55 6.46e-05 ATTTCTGAGA GAAGGCTT TTCCACATTC chr19:19822278-19822358 24 6.46e-05 TTGAAAATCT GAAGGCTT TCCCACATTG chr13:91333791-91333871 39 6.46e-05 ttggcttaat gaaggctt gtcacaaatt chr19:52376561-52376641 13 6.46e-05 ACTTTCTGGA GAAGGCTT TTCCACATTC chrX:47835722-47835802 27 6.46e-05 ACTTTTCTCG GAAGGCTT TGCCACACTC chr18:32833870-32833950 15 6.46e-05 AGCTCAAACT GAAGGCTT TGCCACATTC chr5:150275160-150275240 51 6.46e-05 ACTTCTGAGA GAAGGCTT TCCCACATTC chr7:56007367-56007447 17 7.83e-05 ATACTGGAGA AAAGCCCT ATAAATGTAA chr9:130206938-130207018 59 9.23e-05 CGAGTGTGGG AAGGCCTT CAGTTACTGC chr19:40519867-40519947 64 9.23e-05 GGAATGTGGA AAGGCCTT TTGTCGAGT chr19:57089387-57089467 40 9.23e-05 GGAATGTGGT AAGGCCTT CAGTCAGATT chr9:115759747-115759827 56 9.23e-05 ACTCCGATTG AAGGCCTT TCCACATGCA chr19:56952721-56952801 36 9.23e-05 GCGCTGACTA AAGGCCTT ACCACATGTT chr19:37241108-37241188 49 9.23e-05 AGACGGTCTA AAGGCCTT CACGGATTCC chr19:38294010-38294090 14 9.23e-05 AGAATGTGGG AAGGCCTT CAGTCGTGCC chr7:64438580-64438660 8 1.18e-04 TTGGTTA AAAGCTTT GCCACATTCT chr12:133635005-13363508 28 1.18e-04 GGACTGTGAA AAAGCTTT CTCCCAGAAA chr5:178392575-178392655 1 1.18e-04 . AAAGCTTT CAGGGATAAT chr9:99580958-99581038 55 1.18e-04 CTTTGCACTG AAAGCTTT ATCACATCCA chrX:47272883-47272963 18 1.18e-04 AGAATGTGGG AAAGCTTT CTGCCGGAAA chr19:52497538-52497618 69 1.18e-04 TTTTCTGGAG AAAGCTTT CCCA chr12:133503168-13350324 16 1.18e-04 CTTCCTACTA AAAGCTTT CTGACATTCG chr3:44612411-44612491 3 1.43e-04 GA AAAACCTT TTGAATGTAG chr3:44763782-44763862 19 1.43e-04 TGAGTGTGAG AAAACCTT CCGCAAGTAT chr12:133780236-13378031 59 1.43e-04 TCAATGTGCA AAAACCTT TAGTTTGAAG chr19:37619196-37619276 57 1.43e-04 AGAATGTGGA AAAACCTT TAGTCGTGGC chr12:133682383-13368246 66 1.43e-04 GGAATGTGGC AAAACCTT TAGCCAG chr19:35434991-35435071 70 1.80e-04 ACACTGGCGA GAAGCCCT ATG chr8:125989346-125989426 55 1.80e-04 ACACAGGTGA GAAGCCCT ACAAATGTCT chr19:19946341-19946421 52 1.80e-04 ATACTGGAGA GAAGCCCT ACAAATGTAA chr8:145933383-145933463 54 1.80e-04 ATGCTTGAGA GAAGCCCT ACAAATGCAG chr12:133502355-13350243 16 1.80e-04 ACTACATTCA AAGGGCTT TTCTCCAGTA chrX:47918689-47918769 18 1.80e-04 ACTGCATTCA AAGGGCTT CTCTCTGGTA chr3:44763577-44763657 56 1.80e-04 TGAATGTGGA AAGGGCTT TAATCAGAAC chr3:75787517-75787597 45 2.15e-04 ACTTCTGGCT AAAGGTTT TTCCACATTC chr6:27326570-27326650 6 2.15e-04 AACTG AAAGGTTT CCCACAGTCA chr19:35250524-35250604 54 2.15e-04 AGTTGAGGCA AAAGGTTT TTCCACATTC chr1:23688740-23688820 22 2.59e-04 AGCTCCGGCT GAAGCTTT TCCCACAAGC chr19:52418801-52418881 10 2.59e-04 CTTATTGCT GAAGCTTT TCTGACATTT chr2:171767973-171768053 46 2.59e-04 atggctcact gaagcttt gaccctctcg chr19:52869749-52869829 73 2.77e-04 ATACTGGAGA GAAACCTT chr5:178359378-178359458 73 2.77e-04 ACACTGGAGA GAAACCTT chr12:133780438-13378051 25 3.27e-04 GGAATGCGGG AAATCCTT TAGTTTCAAT chr19:7083484-7083564 41 3.27e-04 TGAGTGTGGG AAATCCTT TACCAATAGC chr19:44351515-44351595 65 3.27e-04 AGCTGGGGAT CAAGCCTT GTTAAACA chr19:9453516-9453596 25 3.27e-04 AAAGTGTGGG CAAGCCTT CAGTATCTCA chr7:57342425-57342505 33 3.27e-04 ATGCATGGCT CAAGCCTT ACTAAACATA chr16:75203995-75204075 4 3.27e-04 GGA AAATCCTT TATCCAGAAC chr19:52365353-52365433 14 3.67e-04 CTTACTGGAG AAGGCCCT ATCACAGTCT chr20:45084911-45084991 13 3.67e-04 ATTTCACACA GAAGGTTT TCTCACATTC chr19:8922236-8922316 27 3.67e-04 AGCTCTTCCT GAAGGTTT TCCCACAATC chr10:44020091-44020171 55 3.67e-04 ATACTGGAGA AAGGCCCT GTGAATGTAA chr9:99580283-99580363 57 4.28e-04 ATTTCTGACT GAAAGCTT CCCCACACTG chr19:52978144-52978224 56 4.28e-04 AATTGCGACT AAAGACTT TGCCACATTC chr19:38294219-38294299 29 4.65e-04 ATACTGGTGA AAAACCCT ACAAATGTAA chr19:56935400-56935480 10 4.65e-04 TACTGGAGA AAAACCCT ATATGTGTAA chr19:54080519-54080599 43 5.48e-04 AGACTGTGGG AAGACCTT TAGCCGTGTG chr19:37038221-37038301 31 5.48e-04 ACTATTTCTA AAGACCTT TCCACATGCT chr19:52977287-52977367 7 5.48e-04 TGATTG AAGACCTT GCCACATTCA chr9:115759951-115760031 20 6.01e-04 ACTGTGGCAA AAAACTTT CCGACATTGC chr7:63337177-63337257 51 6.01e-04 AGAATGTGGC AAAACTTT TAACTGGTTC chr19:52618967-52619047 29 6.01e-04 ATGTATGCTG AAAACTTT GCCACATTCA chr7:105401243-105401323 37 6.11e-04 atgtatgtgc aagggcct gtggcagaaa chr22:22084841-22084921 20 6.37e-04 ACAGGTGTGG AAAGGTCT GGAAAAATTT chr19:38055868-38055948 13 6.37e-04 TAGCACGTAC AAAGGTCT TCCCACATTC chr19:12358571-12358651 20 7.06e-04 TTTACACTCA AAGGGTTT ATCTCCAGTG chr17:16455442-16455522 71 7.06e-04 ATTGCATTTA AAGGGTTT TT chr16:68598054-68598134 5 7.06e-04 TGGG GAAGACTT TAGTCACATT chr7:91910308-91910388 35 7.76e-04 acttacagga aaaggatt cgaagcaaaa chr5:179686044-179686124 68 7.76e-04 ATACCAGAGA GAAACCCT TTGAC chr10:44112424-44112504 36 7.76e-04 ATACTGGGGA GAAACCCT ATCACTGCAG chr1:227842977-227843057 12 7.76e-04 ATACTGGAGA GAAACCCT ACAAATGTGA chr19:44981408-44981488 36 7.76e-04 AACTCTGGCT AAAGGATT TCCCACATTG chr19:37904585-37904665 36 7.76e-04 GATGTGCAAT GAGGCTTT GCTTCTGGCT chr8:125989141-125989221 8 7.76e-04 CGGGAGA GAAACCCT ACAAATGTCC chr19:35434778-35434858 31 7.76e-04 ATACTGGCGA GAAACCCT ATGAATGTAA chr19:37211417-37211497 51 7.76e-04 ACACAGGTGA GAAACCCT ATGTTTGTAA chr7:6714727-6714807 29 7.76e-04 ACACTGGGGA GAAACCCT GTGGATGCAA chr5:178506444-178506524 48 7.76e-04 ATACAGGTGA GAAACCCT ATAAATGTAG chr12:133697209-13369728 44 7.76e-04 ACTATAAGGT AAGAGCTT GTGCCAAAGG chr7:56754157-56754237 26 8.60e-04 AGAATCAGTT AAAAGTTT TACCACATTC chr19:53116647-53116727 25 8.60e-04 AATTTTGACT GAATGCTT TGTCACATTC chr19:52364975-52365055 53 8.60e-04 ACAAAGTAGC GAATGCTT TCTTACAATC chr19:58639557-58639637 7 8.60e-04 TTCCTG AAAAGTTT CTGACACTGG chr18:32886663-32886743 21 8.60e-04 TCAGTGTAGC AAAAGTTT CAGTCAGAAT chr19:58619295-58619375 54 8.60e-04 GATGTTCCTG AAAAGTTT GACACTGGTT chr5:140638756-140638836 65 9.41e-04 TGAATGCAAG AAAGTCTT CACTGATC chr4:368497-368577 57 9.41e-04 ATACTGGAGG AAAGTCTT ACAAATGTGA chr1:161019448-161019528 68 9.41e-04 ATACAAAGGT CAAGCCCT GACCC chr5:140640662-140640742 68 9.41e-04 AGAATGTGGA AAATCCCT TAGTT chr19:9639409-9639489 53 9.78e-04 CTTACACTCA CAGGCCTT CTCTTCAGTG chr19:9492193-9492273 21 9.78e-04 CCAGTGTGGA AAGTCCTT CAGCACAGGC chr19:56935599-56935679 7 1.05e-03 TGCAGG AAATCTTT CAGGCAGCGT chr4:367048-367128 47 1.05e-03 GAATGTAGGA AAATCTTT ACCTCATCCT chr13:90588942-90589022 35 1.17e-03 CCCTACATGA GAAGGATT TGCAGGAATT chrX:47307728-47307808 13 1.17e-03 ACTTCTTAGT GAAGGATT TCCCACAGTC chr7:6731601-6731681 54 1.17e-03 CCTTCTGGCA GAAGGATT TCCCACACTG chr19:58490276-58490356 41 1.17e-03 AGCTCCAGCT GAAGGATT TTCCACATTC chr19:44980802-44980882 55 1.17e-03 ACTCTGTCTG AAGGACTT CCCACATTGA chr9:99521720-99521800 69 1.29e-03 ACTTCTGGGA GAAAGTTT TTCC chr19:52569953-52570033 36 1.29e-03 AACTTTGACT AAAGCACT TCCCACATCG chr19:44981023-44981103 2 1.29e-03 A AAAGATTT TCCACATTCA chr16:31613318-31613398 58 1.29e-03 GGAATGAGAA AAAGATTT GCTATGTGAT chr7:92569277-92569357 22 1.29e-03 agaagcacac aaagcact ttttctcatg chr3:75786169-75786249 52 1.29e-03 ACTTCTGGGA GAAAGTTT TCCTACATTC chr7:56534417-56534497 9 1.43e-03 CCTTCAAC CAGGGCTT ACATCTCACT chr9:99521482-99521562 55 1.52e-03 ACTTCTGGCC AAATGTTT TTCCACATTG chr7:6715860-6715940 43 1.52e-03 GAATGCAGGA AAATGTTT TATGTGAAGT chr16:57251038-57251118 65 1.82e-03 AAGTATCCTA GAGACCCT TTAGACAA chr1:247264072-247264152 54 2.06e-03 AAGAAAATCT GAATGTTT TCCCACATTC chr22:23254851-23254931 64 2.22e-03 TATGTGGATT AAATACTT GACGTTATC chr6:149560865-149560945 23 2.22e-03 Ctcactcaac aaatactt cttgagcacc chr2:95815325-95815405 14 2.22e-03 AAGTGTGACC AAAGGCTC GTCCACATTC chr5:150330308-150330388 61 2.53e-03 CATCTGGGTT CAAACTTT TCTACATTCA chr5:140144041-140144121 52 2.65e-03 CATACTGTTG AAAAACCT GAAAAAATGT chr10:132080914-13208099 6 3.02e-03 TGGTA GAAGTTTT CCCCACATCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:57529289-57529369 1.9e-05 36_[+2]_36 chr1:40961133-40961213 1.9e-05 16_[+2]_56 chr19:14829490-14829570 1.9e-05 17_[+2]_55 chr19:58639759-58639839 1.9e-05 56_[+2]_16 chr19:37368159-37368239 1.9e-05 29_[+2]_43 chr4:155293-155373 1.9e-05 49_[+2]_23 chr3:44776314-44776394 1.9e-05 19_[+2]_53 chr16:68598350-68598430 1.9e-05 17_[+2]_55 chr19:52418528-52418608 1.9e-05 30_[+2]_42 chr1:40929013-40929093 1.9e-05 2_[+2]_70 chr19:38160399-38160479 1.9e-05 22_[+2]_50 chr16:31927462-31927542 1.9e-05 22_[+2]_50 chr19:37129946-37130026 1.9e-05 35_[+2]_37 chr19:58773816-58773896 1.9e-05 70_[+2]_2 chr17:4995645-4995725 1.9e-05 15_[+2]_57 chr19:2834375-2834455 1.9e-05 16_[+2]_56 chr19:36940085-36940165 1.9e-05 7_[+2]_65 chr5:178359592-178359672 1.9e-05 54_[+2]_18 chr19:19946656-19946736 1.9e-05 16_[+2]_56 chr16:31766623-31766703 1.9e-05 15_[+2]_57 chr19:12576169-12576249 1.9e-05 36_[+2]_36 chr8:145933174-145933254 1.9e-05 38_[+2]_34 chr19:37619569-37619649 1.9e-05 19_[+2]_53 chr9:114304926-114305006 1.9e-05 44_[+2]_28 chr16:68597763-68597843 1.9e-05 43_[+2]_29 chr5:150311106-150311186 1.9e-05 13_[+2]_59 chr19:38055658-38055738 1.9e-05 55_[+2]_17 chr12:133682992-13368307 1.9e-05 44_[+2]_28 chr8:146067784-146067864 1.9e-05 49_[+2]_23 chr3:44762859-44762939 1.9e-05 17_[+2]_55 chr19:37734143-37734223 1.9e-05 27_[+2]_45 chr19:35250270-35250350 1.9e-05 56_[+2]_16 chr10:42832489-42832569 3.7e-05 41_[+2]_31 chr1:247353354-247353434 3.7e-05 35_[+2]_37 chr19:12638252-12638332 3.7e-05 51_[+2]_21 chr4:437376-437456 3.7e-05 21_[+2]_51 chr9:115805523-115805603 3.7e-05 48_[+2]_24 chr4:265482-265562 3.7e-05 50_[+2]_22 chr19:23159196-23159276 3.7e-05 63_[+2]_9 chr6:27326769-27326849 3.7e-05 51_[+2]_21 chr19:12125963-12126043 3.7e-05 5_[+2]_67 chr19:36884361-36884441 3.7e-05 7_[+2]_65 chr3:44540787-44540867 3.7e-05 53_[+2]_19 chr5:179685633-179685713 3.7e-05 30_[+2]_42 chr19:9406156-9406236 3.7e-05 51_[+2]_21 chr19:53669041-53669121 3.7e-05 56_[+2]_16 chr9:115805181-115805261 3.7e-05 54_[+2]_18 chr12:133635226-13363530 5.1e-05 30_[+2]_42 chr12:133779967-13378004 5.1e-05 47_[+2]_25 chr7:57233278-57233358 5.1e-05 67_[+2]_5 chr6:27420534-27420614 6.5e-05 26_[+2]_46 chr19:37904877-37904957 6.5e-05 13_[+2]_59 chr5:150275744-150275824 6.5e-05 54_[+2]_18 chr19:19822278-19822358 6.5e-05 23_[+2]_49 chr13:91333791-91333871 6.5e-05 38_[+2]_34 chr19:52376561-52376641 6.5e-05 12_[+2]_60 chrX:47835722-47835802 6.5e-05 26_[+2]_46 chr18:32833870-32833950 6.5e-05 14_[+2]_58 chr5:150275160-150275240 6.5e-05 50_[+2]_22 chr7:56007367-56007447 7.8e-05 16_[+2]_56 chr9:130206938-130207018 9.2e-05 58_[+2]_14 chr19:40519867-40519947 9.2e-05 63_[+2]_9 chr19:57089387-57089467 9.2e-05 39_[+2]_33 chr9:115759747-115759827 9.2e-05 55_[+2]_17 chr19:56952721-56952801 9.2e-05 35_[+2]_37 chr19:37241108-37241188 9.2e-05 48_[+2]_24 chr19:38294010-38294090 9.2e-05 13_[+2]_59 chr7:64438580-64438660 0.00012 7_[+2]_65 chr12:133635005-13363508 0.00012 27_[+2]_45 chr5:178392575-178392655 0.00012 [+2]_72 chr9:99580958-99581038 0.00012 54_[+2]_18 chrX:47272883-47272963 0.00012 17_[+2]_55 chr19:52497538-52497618 0.00012 68_[+2]_4 chr12:133503168-13350324 0.00012 15_[+2]_57 chr3:44612411-44612491 0.00014 2_[+2]_70 chr3:44763782-44763862 0.00014 18_[+2]_54 chr12:133780236-13378031 0.00014 58_[+2]_14 chr19:37619196-37619276 0.00014 56_[+2]_16 chr12:133682383-13368246 0.00014 65_[+2]_7 chr19:35434991-35435071 0.00018 69_[+2]_3 chr8:125989346-125989426 0.00018 54_[+2]_18 chr19:19946341-19946421 0.00018 51_[+2]_21 chr8:145933383-145933463 0.00018 53_[+2]_19 chr12:133502355-13350243 0.00018 15_[+2]_57 chrX:47918689-47918769 0.00018 17_[+2]_55 chr3:44763577-44763657 0.00018 55_[+2]_17 chr3:75787517-75787597 0.00022 44_[+2]_28 chr6:27326570-27326650 0.00022 5_[+2]_67 chr19:35250524-35250604 0.00022 53_[+2]_19 chr1:23688740-23688820 0.00026 21_[+2]_51 chr19:52418801-52418881 0.00026 9_[+2]_63 chr2:171767973-171768053 0.00026 45_[+2]_27 chr19:52869749-52869829 0.00028 72_[+2] chr5:178359378-178359458 0.00028 72_[+2] chr12:133780438-13378051 0.00033 24_[+2]_48 chr19:7083484-7083564 0.00033 40_[+2]_32 chr19:44351515-44351595 0.00033 64_[+2]_8 chr19:9453516-9453596 0.00033 24_[+2]_48 chr7:57342425-57342505 0.00033 32_[+2]_40 chr16:75203995-75204075 0.00033 3_[+2]_69 chr19:52365353-52365433 0.00037 13_[+2]_59 chr20:45084911-45084991 0.00037 12_[+2]_60 chr19:8922236-8922316 0.00037 26_[+2]_46 chr10:44020091-44020171 0.00037 54_[+2]_18 chr9:99580283-99580363 0.00043 56_[+2]_16 chr19:52978144-52978224 0.00043 55_[+2]_17 chr19:38294219-38294299 0.00047 28_[+2]_44 chr19:56935400-56935480 0.00047 9_[+2]_63 chr19:54080519-54080599 0.00055 42_[+2]_30 chr19:37038221-37038301 0.00055 30_[+2]_42 chr19:52977287-52977367 0.00055 6_[+2]_66 chr9:115759951-115760031 0.0006 19_[+2]_53 chr7:63337177-63337257 0.0006 50_[+2]_22 chr19:52618967-52619047 0.0006 28_[+2]_44 chr7:105401243-105401323 0.00061 36_[+2]_36 chr22:22084841-22084921 0.00064 19_[+2]_53 chr19:38055868-38055948 0.00064 12_[+2]_60 chr19:12358571-12358651 0.00071 19_[+2]_53 chr17:16455442-16455522 0.00071 70_[+2]_2 chr16:68598054-68598134 0.00071 4_[+2]_68 chr7:91910308-91910388 0.00078 34_[+2]_38 chr5:179686044-179686124 0.00078 67_[+2]_5 chr10:44112424-44112504 0.00078 35_[+2]_37 chr1:227842977-227843057 0.00078 11_[+2]_61 chr19:44981408-44981488 0.00078 35_[+2]_37 chr19:37904585-37904665 0.00078 35_[+2]_37 chr8:125989141-125989221 0.00078 7_[+2]_65 chr19:35434778-35434858 0.00078 30_[+2]_42 chr19:37211417-37211497 0.00078 50_[+2]_22 chr7:6714727-6714807 0.00078 28_[+2]_44 chr5:178506444-178506524 0.00078 47_[+2]_25 chr12:133697209-13369728 0.00078 43_[+2]_29 chr7:56754157-56754237 0.00086 25_[+2]_47 chr19:53116647-53116727 0.00086 24_[+2]_48 chr19:52364975-52365055 0.00086 52_[+2]_20 chr19:58639557-58639637 0.00086 6_[+2]_66 chr18:32886663-32886743 0.00086 20_[+2]_52 chr19:58619295-58619375 0.00086 53_[+2]_19 chr5:140638756-140638836 0.00094 64_[+2]_8 chr4:368497-368577 0.00094 56_[+2]_16 chr1:161019448-161019528 0.00094 67_[+2]_5 chr5:140640662-140640742 0.00094 67_[+2]_5 chr19:9639409-9639489 0.00098 52_[+2]_20 chr19:9492193-9492273 0.00098 20_[+2]_52 chr19:56935599-56935679 0.001 6_[+2]_66 chr4:367048-367128 0.001 46_[+2]_26 chr13:90588942-90589022 0.0012 34_[+2]_38 chrX:47307728-47307808 0.0012 12_[+2]_60 chr7:6731601-6731681 0.0012 53_[+2]_19 chr19:58490276-58490356 0.0012 40_[+2]_32 chr19:44980802-44980882 0.0012 54_[+2]_18 chr9:99521720-99521800 0.0013 68_[+2]_4 chr19:52569953-52570033 0.0013 35_[+2]_37 chr19:44981023-44981103 0.0013 1_[+2]_71 chr16:31613318-31613398 0.0013 57_[+2]_15 chr7:92569277-92569357 0.0013 21_[+2]_51 chr3:75786169-75786249 0.0013 51_[+2]_21 chr7:56534417-56534497 0.0014 8_[+2]_64 chr9:99521482-99521562 0.0015 54_[+2]_18 chr7:6715860-6715940 0.0015 42_[+2]_30 chr16:57251038-57251118 0.0018 64_[+2]_8 chr1:247264072-247264152 0.0021 53_[+2]_19 chr22:23254851-23254931 0.0022 63_[+2]_9 chr6:149560865-149560945 0.0022 22_[+2]_50 chr2:95815325-95815405 0.0022 13_[+2]_59 chr5:150330308-150330388 0.0025 60_[+2]_12 chr5:140144041-140144121 0.0027 51_[+2]_21 chr10:132080914-13208099 0.003 5_[+2]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAGSCTT width=8 seqs=168 chr7:57529289-57529369 ( 37) AAAGCCTT 1 chr1:40961133-40961213 ( 17) AAAGCCTT 1 chr19:14829490-14829570 ( 18) AAAGCCTT 1 chr19:58639759-58639839 ( 57) AAAGCCTT 1 chr19:37368159-37368239 ( 30) AAAGCCTT 1 chr4:155293-155373 ( 50) AAAGCCTT 1 chr3:44776314-44776394 ( 20) AAAGCCTT 1 chr16:68598350-68598430 ( 18) AAAGCCTT 1 chr19:52418528-52418608 ( 31) AAAGCCTT 1 chr1:40929013-40929093 ( 3) AAAGCCTT 1 chr19:38160399-38160479 ( 23) AAAGCCTT 1 chr16:31927462-31927542 ( 23) AAAGCCTT 1 chr19:37129946-37130026 ( 36) AAAGCCTT 1 chr19:58773816-58773896 ( 71) AAAGCCTT 1 chr17:4995645-4995725 ( 16) AAAGCCTT 1 chr19:2834375-2834455 ( 17) AAAGCCTT 1 chr19:36940085-36940165 ( 8) AAAGCCTT 1 chr5:178359592-178359672 ( 55) AAAGCCTT 1 chr19:19946656-19946736 ( 17) AAAGCCTT 1 chr16:31766623-31766703 ( 16) AAAGCCTT 1 chr19:12576169-12576249 ( 37) AAAGCCTT 1 chr8:145933174-145933254 ( 39) AAAGCCTT 1 chr19:37619569-37619649 ( 20) AAAGCCTT 1 chr9:114304926-114305006 ( 45) AAAGCCTT 1 chr16:68597763-68597843 ( 44) AAAGCCTT 1 chr5:150311106-150311186 ( 14) AAAGCCTT 1 chr19:38055658-38055738 ( 56) AAAGCCTT 1 chr12:133682992-13368307 ( 45) AAAGCCTT 1 chr8:146067784-146067864 ( 50) AAAGCCTT 1 chr3:44762859-44762939 ( 18) AAAGCCTT 1 chr19:37734143-37734223 ( 28) AAAGCCTT 1 chr19:35250270-35250350 ( 57) AAAGCCTT 1 chr10:42832489-42832569 ( 42) AAAGGCTT 1 chr1:247353354-247353434 ( 36) AAAGGCTT 1 chr19:12638252-12638332 ( 52) AAAGGCTT 1 chr4:437376-437456 ( 22) AAAGGCTT 1 chr9:115805523-115805603 ( 49) AAAGGCTT 1 chr4:265482-265562 ( 51) AAAGGCTT 1 chr19:23159196-23159276 ( 64) AAAGGCTT 1 chr6:27326769-27326849 ( 52) AAAGGCTT 1 chr19:12125963-12126043 ( 6) AAAGGCTT 1 chr19:36884361-36884441 ( 8) AAAGGCTT 1 chr3:44540787-44540867 ( 54) AAAGGCTT 1 chr5:179685633-179685713 ( 31) AAAGGCTT 1 chr19:9406156-9406236 ( 52) AAAGGCTT 1 chr19:53669041-53669121 ( 57) AAAGGCTT 1 chr9:115805181-115805261 ( 55) AAAGGCTT 1 chr12:133635226-13363530 ( 31) GAAGCCTT 1 chr12:133779967-13378004 ( 48) GAAGCCTT 1 chr7:57233278-57233358 ( 68) GAAGCCTT 1 chr6:27420534-27420614 ( 27) GAAGGCTT 1 chr19:37904877-37904957 ( 14) GAAGGCTT 1 chr5:150275744-150275824 ( 55) GAAGGCTT 1 chr19:19822278-19822358 ( 24) GAAGGCTT 1 chr13:91333791-91333871 ( 39) GAAGGCTT 1 chr19:52376561-52376641 ( 13) GAAGGCTT 1 chrX:47835722-47835802 ( 27) GAAGGCTT 1 chr18:32833870-32833950 ( 15) GAAGGCTT 1 chr5:150275160-150275240 ( 51) GAAGGCTT 1 chr7:56007367-56007447 ( 17) AAAGCCCT 1 chr9:130206938-130207018 ( 59) AAGGCCTT 1 chr19:40519867-40519947 ( 64) AAGGCCTT 1 chr19:57089387-57089467 ( 40) AAGGCCTT 1 chr9:115759747-115759827 ( 56) AAGGCCTT 1 chr19:56952721-56952801 ( 36) AAGGCCTT 1 chr19:37241108-37241188 ( 49) AAGGCCTT 1 chr19:38294010-38294090 ( 14) AAGGCCTT 1 chr7:64438580-64438660 ( 8) AAAGCTTT 1 chr12:133635005-13363508 ( 28) AAAGCTTT 1 chr5:178392575-178392655 ( 1) AAAGCTTT 1 chr9:99580958-99581038 ( 55) AAAGCTTT 1 chrX:47272883-47272963 ( 18) AAAGCTTT 1 chr19:52497538-52497618 ( 69) AAAGCTTT 1 chr12:133503168-13350324 ( 16) AAAGCTTT 1 chr3:44612411-44612491 ( 3) AAAACCTT 1 chr3:44763782-44763862 ( 19) AAAACCTT 1 chr12:133780236-13378031 ( 59) AAAACCTT 1 chr19:37619196-37619276 ( 57) AAAACCTT 1 chr12:133682383-13368246 ( 66) AAAACCTT 1 chr19:35434991-35435071 ( 70) GAAGCCCT 1 chr8:125989346-125989426 ( 55) GAAGCCCT 1 chr19:19946341-19946421 ( 52) GAAGCCCT 1 chr8:145933383-145933463 ( 54) GAAGCCCT 1 chr12:133502355-13350243 ( 16) AAGGGCTT 1 chrX:47918689-47918769 ( 18) AAGGGCTT 1 chr3:44763577-44763657 ( 56) AAGGGCTT 1 chr3:75787517-75787597 ( 45) AAAGGTTT 1 chr6:27326570-27326650 ( 6) AAAGGTTT 1 chr19:35250524-35250604 ( 54) AAAGGTTT 1 chr1:23688740-23688820 ( 22) GAAGCTTT 1 chr19:52418801-52418881 ( 10) GAAGCTTT 1 chr2:171767973-171768053 ( 46) GAAGCTTT 1 chr19:52869749-52869829 ( 73) GAAACCTT 1 chr5:178359378-178359458 ( 73) GAAACCTT 1 chr12:133780438-13378051 ( 25) AAATCCTT 1 chr19:7083484-7083564 ( 41) AAATCCTT 1 chr19:44351515-44351595 ( 65) CAAGCCTT 1 chr19:9453516-9453596 ( 25) CAAGCCTT 1 chr7:57342425-57342505 ( 33) CAAGCCTT 1 chr16:75203995-75204075 ( 4) AAATCCTT 1 chr19:52365353-52365433 ( 14) AAGGCCCT 1 chr20:45084911-45084991 ( 13) GAAGGTTT 1 chr19:8922236-8922316 ( 27) GAAGGTTT 1 chr10:44020091-44020171 ( 55) AAGGCCCT 1 chr9:99580283-99580363 ( 57) GAAAGCTT 1 chr19:52978144-52978224 ( 56) AAAGACTT 1 chr19:38294219-38294299 ( 29) AAAACCCT 1 chr19:56935400-56935480 ( 10) AAAACCCT 1 chr19:54080519-54080599 ( 43) AAGACCTT 1 chr19:37038221-37038301 ( 31) AAGACCTT 1 chr19:52977287-52977367 ( 7) AAGACCTT 1 chr9:115759951-115760031 ( 20) AAAACTTT 1 chr7:63337177-63337257 ( 51) AAAACTTT 1 chr19:52618967-52619047 ( 29) AAAACTTT 1 chr7:105401243-105401323 ( 37) AAGGGCCT 1 chr22:22084841-22084921 ( 20) AAAGGTCT 1 chr19:38055868-38055948 ( 13) AAAGGTCT 1 chr19:12358571-12358651 ( 20) AAGGGTTT 1 chr17:16455442-16455522 ( 71) AAGGGTTT 1 chr16:68598054-68598134 ( 5) GAAGACTT 1 chr7:91910308-91910388 ( 35) AAAGGATT 1 chr5:179686044-179686124 ( 68) GAAACCCT 1 chr10:44112424-44112504 ( 36) GAAACCCT 1 chr1:227842977-227843057 ( 12) GAAACCCT 1 chr19:44981408-44981488 ( 36) AAAGGATT 1 chr19:37904585-37904665 ( 36) GAGGCTTT 1 chr8:125989141-125989221 ( 8) GAAACCCT 1 chr19:35434778-35434858 ( 31) GAAACCCT 1 chr19:37211417-37211497 ( 51) GAAACCCT 1 chr7:6714727-6714807 ( 29) GAAACCCT 1 chr5:178506444-178506524 ( 48) GAAACCCT 1 chr12:133697209-13369728 ( 44) AAGAGCTT 1 chr7:56754157-56754237 ( 26) AAAAGTTT 1 chr19:53116647-53116727 ( 25) GAATGCTT 1 chr19:52364975-52365055 ( 53) GAATGCTT 1 chr19:58639557-58639637 ( 7) AAAAGTTT 1 chr18:32886663-32886743 ( 21) AAAAGTTT 1 chr19:58619295-58619375 ( 54) AAAAGTTT 1 chr5:140638756-140638836 ( 65) AAAGTCTT 1 chr4:368497-368577 ( 57) AAAGTCTT 1 chr1:161019448-161019528 ( 68) CAAGCCCT 1 chr5:140640662-140640742 ( 68) AAATCCCT 1 chr19:9639409-9639489 ( 53) CAGGCCTT 1 chr19:9492193-9492273 ( 21) AAGTCCTT 1 chr19:56935599-56935679 ( 7) AAATCTTT 1 chr4:367048-367128 ( 47) AAATCTTT 1 chr13:90588942-90589022 ( 35) GAAGGATT 1 chrX:47307728-47307808 ( 13) GAAGGATT 1 chr7:6731601-6731681 ( 54) GAAGGATT 1 chr19:58490276-58490356 ( 41) GAAGGATT 1 chr19:44980802-44980882 ( 55) AAGGACTT 1 chr9:99521720-99521800 ( 69) GAAAGTTT 1 chr19:52569953-52570033 ( 36) AAAGCACT 1 chr19:44981023-44981103 ( 2) AAAGATTT 1 chr16:31613318-31613398 ( 58) AAAGATTT 1 chr7:92569277-92569357 ( 22) AAAGCACT 1 chr3:75786169-75786249 ( 52) GAAAGTTT 1 chr7:56534417-56534497 ( 9) CAGGGCTT 1 chr9:99521482-99521562 ( 55) AAATGTTT 1 chr7:6715860-6715940 ( 43) AAATGTTT 1 chr16:57251038-57251118 ( 65) GAGACCCT 1 chr1:247264072-247264152 ( 54) GAATGTTT 1 chr22:23254851-23254931 ( 64) AAATACTT 1 chr6:149560865-149560945 ( 23) AAATACTT 1 chr2:95815325-95815405 ( 14) AAAGGCTC 1 chr5:150330308-150330388 ( 61) CAAACTTT 1 chr5:140144041-140144121 ( 52) AAAAACCT 1 chr10:132080914-13208099 ( 6) GAAGTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.05735 E= 2.9e-096 129 -237 34 -1404 183 -1404 -1404 -1404 159 -1404 -51 -1404 -48 -1404 176 -181 -256 145 71 -403 -256 176 -1404 -37 -1404 -47 -1404 153 -1404 -517 -1404 177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 168 E= 2.9e-096 0.690476 0.041667 0.267857 0.000000 1.000000 0.000000 0.000000 0.000000 0.851190 0.000000 0.148810 0.000000 0.202381 0.000000 0.714286 0.083333 0.047619 0.589286 0.345238 0.017857 0.047619 0.726190 0.000000 0.226190 0.000000 0.154762 0.000000 0.845238 0.000000 0.005952 0.000000 0.994048 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGSCTT MEME-2 regular expression -------------------------------------------------------------------------------- [AG]AA[GA][CG][CT]TT -------------------------------------------------------------------------------- Time 8.47 secs. ******************************************************************************** ******************************************************************************** MOTIF CCACATTC MEME-3 width = 8 sites = 78 llr = 693 E-value = 1.1e-070 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::9:a::: pos.-specific C 99:a:2:8 probability G :::::::2 matrix T 111::8a1 bits 2.2 2.0 * 1.8 ** ** 1.6 ***** * Relative 1.3 ***** * Entropy 1.1 ***** ** (12.8 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCACATTC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:75787517-75787597 55 1.45e-05 AAAGGTTTTT CCACATTC ACTACACTGA chr10:42832489-42832569 52 1.45e-05 AAAGGCTTTA CCACATTC TTCGAATTTG chr1:247353354-247353434 65 1.45e-05 AAAGACTTTA CCACATTC TTCACATT chr7:64438580-64438660 17 1.45e-05 AAAAGCTTTG CCACATTC TTCACATTTG chr7:56754157-56754237 36 1.45e-05 AAAAGTTTTA CCACATTC TTCACATGTG chr19:12638252-12638332 62 1.45e-05 AAAGGCTTTC CCACATTC CTGACATTTA chr19:58490276-58490356 51 1.45e-05 GAAGGATTTT CCACATTC AGTACATTTA chr4:437376-437456 32 1.45e-05 AAAGGCTTTA CCACATTC TAAACATTTA chr19:44981023-44981103 11 1.45e-05 AAAAGATTTT CCACATTC ACTACATTCA chr9:115805523-115805603 59 1.45e-05 AAAGGCTTTT CCACATTC ATTGCATTCA chr1:247264072-247264152 64 1.45e-05 GAATGTTTTC CCACATTC CTTACATTC chr5:150275744-150275824 65 1.45e-05 GAAGGCTTTT CCACATTC AGAACAAT chr11:3380712-3380792 27 1.45e-05 AAAGATGTTG CCACATTC TTCACACGTG chr7:62548077-62548157 19 1.45e-05 CAAACTTTTG CCACATTC TTCATATGTG chr19:52418528-52418608 41 1.45e-05 AAAGCCTTTT CCACATTC ACTGCAGTGA chr19:38055868-38055948 23 1.45e-05 AAAGGTCTTC CCACATTC CTTACATTCA chr3:75787108-75787188 44 1.45e-05 ATATGTTTTT CCACATTC GTTACATGCG chr19:37129946-37130026 45 1.45e-05 AAAAGCCTTC CCACATTC ATGACATTCA chr1:247320199-247320279 6 1.45e-05 CTTTG CCACATTC CATGCACACA chr19:52376561-52376641 23 1.45e-05 GAAGGCTTTT CCACATTC ACTACATTCA chr2:95815325-95815405 24 1.45e-05 AAAGGCTCGT CCACATTC ATTACATTTG chr18:32833870-32833950 25 1.45e-05 GAAGGCTTTG CCACATTC TTTACATGCA chr5:150275160-150275240 61 1.45e-05 GAAGGCTTTC CCACATTC AGTACATATA chr17:16525840-16525920 3 1.45e-05 TT CCACATTC CTTACAGGTG chr19:52978144-52978224 66 1.45e-05 AAAGACTTTG CCACATTC CATACAT chr5:150311106-150311186 24 1.45e-05 AAAGCCTTTT CCACATTC AGAACAATCA chr19:52618967-52619047 38 1.45e-05 GAAAACTTTG CCACATTC ATTGCATTTA chr19:37310128-37310208 3 1.45e-05 TT CCACATTC CTTACACTCA chr19:35250524-35250604 64 1.45e-05 AAAGGTTTTT CCACATTC TTTACATAA chr19:52977287-52977367 16 1.45e-05 GAAGACCTTG CCACATTC ATTACATTTG chr19:9406156-9406236 62 1.45e-05 AAAGGCTTTC CCACATTC CTTACATTCA chr10:132081610-13208169 65 1.45e-05 AAACTGTTTC CCACATTC CCTCTATC chr9:115805181-115805261 65 1.45e-05 AAAGGCTTTC CCACATTC ATTACACT chr19:35250270-35250350 66 1.45e-05 AAAAGCCTTT CCACATTC ACTGCAC chr19:37904585-37904665 64 2.52e-05 GAATGCTTTT CCACACTC ATTACATTC chr6:27420318-27420398 1 2.52e-05 . CCACACTC ATTACAAGTG chrX:47835722-47835802 37 2.52e-05 GAAGGCTTTG CCACACTC AGTGCATGCA chr3:44541378-44541458 61 2.52e-05 AAAGGCCGCC CCACACTC CTTACATTCA chr19:36884361-36884441 18 2.52e-05 AAAGGCTTTT CCACACTC TTTACACACA chr9:99521482-99521562 65 3.94e-05 AAATGTTTTT CCACATTG ATTGCATT chr19:19822278-19822358 34 3.94e-05 GAAGGCTTTC CCACATTG TTTACATCGA chr4:265482-265562 61 3.94e-05 AAAGGCTTTG CCACATTG TTCACATTTG chr19:44981408-44981488 46 3.94e-05 AAAGGATTTC CCACATTG ATTACACCTG chr6:27326769-27326849 62 3.94e-05 AAAGGCTTTT CCACATTG CTTACATTCA chr19:44980802-44980882 64 3.94e-05 GAAGGACTTC CCACATTG ACTGCATTC chr19:58639759-58639839 66 5.91e-05 GAAAGCCTTT CCACATTT GCTACAC chr19:12358571-12358651 2 5.91e-05 T CCACATTT TTTACACTCA chr19:52659418-52659498 7 5.91e-05 GCTTTA CCACATTT ATCACATTTG chr1:247201180-247201260 49 5.91e-05 GAATGATTTA CCACATTT CTTACATGCA chr19:58490074-58490154 1 5.91e-05 . CCACATTT ATTGCATTCA chr7:6731601-6731681 64 6.95e-05 GAAGGATTTC CCACACTG ATTACATTC chr19:54080519-54080599 3 6.95e-05 TT CCACACTG GGGAGAAAGA chr9:99580283-99580363 67 6.95e-05 GAAAGCTTCC CCACACTG ATTACA chr19:12125963-12126043 16 6.95e-05 AAAGGCTTTC CCACACTG CTTACATTCA chr19:12576169-12576249 46 6.95e-05 GAAAGCCTTA CCACACTG TTTACATTTA chr19:38055658-38055738 65 6.95e-05 AAAAGCCTTC CCACACTG TTTACATT chr12:133697209-13369728 67 6.95e-05 AAAGGATTTT CCACACTG ATTACA chr8:125989346-125989426 22 9.50e-05 AGAGTTCCAG CCTCATTC GCCACCAGCG chrX:47307728-47307808 23 9.50e-05 GAAGGATTTC CCACAGTC ACTGCATTCA chr6:27326570-27326650 15 9.50e-05 GAAAGGTTTC CCACAGTC ATTACATTCA chr12:133682992-13368307 68 9.50e-05 GGAGCTTTTC CCTCATTC TACAT chr19:58619940-58620020 1 9.50e-05 . CCACAGTC ATTACAGGTA chr19:37210614-37210694 65 9.50e-05 TGAAGTCACA CCTCATTC GTCATCAG chr6:27420534-27420614 37 1.15e-04 GAAGGCTTTT TCACATTC ATTACATTTG chr19:53116647-53116727 35 1.15e-04 GAATGCTTTG TCACATTC ATCACACTTA chr20:45084911-45084991 23 1.15e-04 GAAGGTTTTC TCACATTC ATTGCATTTA chr19:36940085-36940165 17 1.15e-04 AAAAGCCTTT TCACATTC CTTACATTCG chr19:37904877-37904957 33 1.34e-04 TCTACAGTTA CTACATTC ATAGGGCTTC chr12:133502355-13350243 7 1.34e-04 CATTCA CTACATTC AAAGGGCTTT chr5:150330308-150330388 70 1.34e-04 TCAAACTTTT CTACATTC ATT chr3:75786169-75786249 62 1.34e-04 GAAAGTTTTC CTACATTC ATTACATCTA chr9:115759747-115759827 65 1.45e-04 GAAGGCCTTT CCACATGC ATTACACT chr19:37038221-37038301 40 1.45e-04 AAAGACCTTT CCACATGC TTTGCATTCA chr19:53669041-53669121 67 1.59e-04 AAAGGCTTTG CCACACTT ATTACA chr1:227842977-227843057 63 1.70e-04 AATTCTCAAA CCTCACTC AGCATAAAAG chr1:227885226-227885306 9 1.81e-04 AGGTCAAC CCACATCC ATTACATTCA chr16:68598350-68598430 41 4.61e-04 AAAGTTCATC TCTCATTC AGCATGAGAG chr4:368497-368577 12 5.03e-04 AACCTTTAAG CCATACTC CAGGCTTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:75787517-75787597 1.4e-05 54_[+3]_18 chr10:42832489-42832569 1.4e-05 51_[+3]_21 chr1:247353354-247353434 1.4e-05 64_[+3]_8 chr7:64438580-64438660 1.4e-05 16_[+3]_56 chr7:56754157-56754237 1.4e-05 35_[+3]_37 chr19:12638252-12638332 1.4e-05 61_[+3]_11 chr19:58490276-58490356 1.4e-05 50_[+3]_22 chr4:437376-437456 1.4e-05 31_[+3]_41 chr19:44981023-44981103 1.4e-05 10_[+3]_62 chr9:115805523-115805603 1.4e-05 58_[+3]_14 chr1:247264072-247264152 1.4e-05 63_[+3]_9 chr5:150275744-150275824 1.4e-05 64_[+3]_8 chr11:3380712-3380792 1.4e-05 26_[+3]_46 chr7:62548077-62548157 1.4e-05 18_[+3]_54 chr19:52418528-52418608 1.4e-05 40_[+3]_32 chr19:38055868-38055948 1.4e-05 22_[+3]_50 chr3:75787108-75787188 1.4e-05 43_[+3]_29 chr19:37129946-37130026 1.4e-05 44_[+3]_28 chr1:247320199-247320279 1.4e-05 5_[+3]_67 chr19:52376561-52376641 1.4e-05 22_[+3]_50 chr2:95815325-95815405 1.4e-05 23_[+3]_49 chr18:32833870-32833950 1.4e-05 24_[+3]_48 chr5:150275160-150275240 1.4e-05 60_[+3]_12 chr17:16525840-16525920 1.4e-05 2_[+3]_70 chr19:52978144-52978224 1.4e-05 65_[+3]_7 chr5:150311106-150311186 1.4e-05 23_[+3]_49 chr19:52618967-52619047 1.4e-05 37_[+3]_35 chr19:37310128-37310208 1.4e-05 2_[+3]_70 chr19:35250524-35250604 1.4e-05 63_[+3]_9 chr19:52977287-52977367 1.4e-05 15_[+3]_57 chr19:9406156-9406236 1.4e-05 61_[+3]_11 chr10:132081610-13208169 1.4e-05 64_[+3]_8 chr9:115805181-115805261 1.4e-05 64_[+3]_8 chr19:35250270-35250350 1.4e-05 65_[+3]_7 chr19:37904585-37904665 2.5e-05 63_[+3]_9 chr6:27420318-27420398 2.5e-05 [+3]_72 chrX:47835722-47835802 2.5e-05 36_[+3]_36 chr3:44541378-44541458 2.5e-05 60_[+3]_12 chr19:36884361-36884441 2.5e-05 17_[+3]_55 chr9:99521482-99521562 3.9e-05 64_[+3]_8 chr19:19822278-19822358 3.9e-05 33_[+3]_39 chr4:265482-265562 3.9e-05 60_[+3]_12 chr19:44981408-44981488 3.9e-05 45_[+3]_27 chr6:27326769-27326849 3.9e-05 61_[+3]_11 chr19:44980802-44980882 3.9e-05 63_[+3]_9 chr19:58639759-58639839 5.9e-05 65_[+3]_7 chr19:12358571-12358651 5.9e-05 1_[+3]_71 chr19:52659418-52659498 5.9e-05 6_[+3]_66 chr1:247201180-247201260 5.9e-05 48_[+3]_24 chr19:58490074-58490154 5.9e-05 [+3]_72 chr7:6731601-6731681 7e-05 63_[+3]_9 chr19:54080519-54080599 7e-05 2_[+3]_70 chr9:99580283-99580363 7e-05 66_[+3]_6 chr19:12125963-12126043 7e-05 15_[+3]_57 chr19:12576169-12576249 7e-05 45_[+3]_27 chr19:38055658-38055738 7e-05 64_[+3]_8 chr12:133697209-13369728 7e-05 66_[+3]_6 chr8:125989346-125989426 9.5e-05 21_[+3]_51 chrX:47307728-47307808 9.5e-05 22_[+3]_50 chr6:27326570-27326650 9.5e-05 14_[+3]_58 chr12:133682992-13368307 9.5e-05 67_[+3]_5 chr19:58619940-58620020 9.5e-05 [+3]_72 chr19:37210614-37210694 9.5e-05 64_[+3]_8 chr6:27420534-27420614 0.00011 36_[+3]_36 chr19:53116647-53116727 0.00011 34_[+3]_38 chr20:45084911-45084991 0.00011 22_[+3]_50 chr19:36940085-36940165 0.00011 16_[+3]_56 chr19:37904877-37904957 0.00013 32_[+3]_40 chr12:133502355-13350243 0.00013 6_[+3]_66 chr5:150330308-150330388 0.00013 69_[+3]_3 chr3:75786169-75786249 0.00013 61_[+3]_11 chr9:115759747-115759827 0.00014 64_[+3]_8 chr19:37038221-37038301 0.00014 39_[+3]_33 chr19:53669041-53669121 0.00016 66_[+3]_6 chr1:227842977-227843057 0.00017 62_[+3]_10 chr1:227885226-227885306 0.00018 8_[+3]_64 chr16:68598350-68598430 0.00046 40_[+3]_32 chr4:368497-368577 0.0005 11_[+3]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCACATTC width=8 seqs=78 chr3:75787517-75787597 ( 55) CCACATTC 1 chr10:42832489-42832569 ( 52) CCACATTC 1 chr1:247353354-247353434 ( 65) CCACATTC 1 chr7:64438580-64438660 ( 17) CCACATTC 1 chr7:56754157-56754237 ( 36) CCACATTC 1 chr19:12638252-12638332 ( 62) CCACATTC 1 chr19:58490276-58490356 ( 51) CCACATTC 1 chr4:437376-437456 ( 32) CCACATTC 1 chr19:44981023-44981103 ( 11) CCACATTC 1 chr9:115805523-115805603 ( 59) CCACATTC 1 chr1:247264072-247264152 ( 64) CCACATTC 1 chr5:150275744-150275824 ( 65) CCACATTC 1 chr11:3380712-3380792 ( 27) CCACATTC 1 chr7:62548077-62548157 ( 19) CCACATTC 1 chr19:52418528-52418608 ( 41) CCACATTC 1 chr19:38055868-38055948 ( 23) CCACATTC 1 chr3:75787108-75787188 ( 44) CCACATTC 1 chr19:37129946-37130026 ( 45) CCACATTC 1 chr1:247320199-247320279 ( 6) CCACATTC 1 chr19:52376561-52376641 ( 23) CCACATTC 1 chr2:95815325-95815405 ( 24) CCACATTC 1 chr18:32833870-32833950 ( 25) CCACATTC 1 chr5:150275160-150275240 ( 61) CCACATTC 1 chr17:16525840-16525920 ( 3) CCACATTC 1 chr19:52978144-52978224 ( 66) CCACATTC 1 chr5:150311106-150311186 ( 24) CCACATTC 1 chr19:52618967-52619047 ( 38) CCACATTC 1 chr19:37310128-37310208 ( 3) CCACATTC 1 chr19:35250524-35250604 ( 64) CCACATTC 1 chr19:52977287-52977367 ( 16) CCACATTC 1 chr19:9406156-9406236 ( 62) CCACATTC 1 chr10:132081610-13208169 ( 65) CCACATTC 1 chr9:115805181-115805261 ( 65) CCACATTC 1 chr19:35250270-35250350 ( 66) CCACATTC 1 chr19:37904585-37904665 ( 64) CCACACTC 1 chr6:27420318-27420398 ( 1) CCACACTC 1 chrX:47835722-47835802 ( 37) CCACACTC 1 chr3:44541378-44541458 ( 61) CCACACTC 1 chr19:36884361-36884441 ( 18) CCACACTC 1 chr9:99521482-99521562 ( 65) CCACATTG 1 chr19:19822278-19822358 ( 34) CCACATTG 1 chr4:265482-265562 ( 61) CCACATTG 1 chr19:44981408-44981488 ( 46) CCACATTG 1 chr6:27326769-27326849 ( 62) CCACATTG 1 chr19:44980802-44980882 ( 64) CCACATTG 1 chr19:58639759-58639839 ( 66) CCACATTT 1 chr19:12358571-12358651 ( 2) CCACATTT 1 chr19:52659418-52659498 ( 7) CCACATTT 1 chr1:247201180-247201260 ( 49) CCACATTT 1 chr19:58490074-58490154 ( 1) CCACATTT 1 chr7:6731601-6731681 ( 64) CCACACTG 1 chr19:54080519-54080599 ( 3) CCACACTG 1 chr9:99580283-99580363 ( 67) CCACACTG 1 chr19:12125963-12126043 ( 16) CCACACTG 1 chr19:12576169-12576249 ( 46) CCACACTG 1 chr19:38055658-38055738 ( 65) CCACACTG 1 chr12:133697209-13369728 ( 67) CCACACTG 1 chr8:125989346-125989426 ( 22) CCTCATTC 1 chrX:47307728-47307808 ( 23) CCACAGTC 1 chr6:27326570-27326650 ( 15) CCACAGTC 1 chr12:133682992-13368307 ( 68) CCTCATTC 1 chr19:58619940-58620020 ( 1) CCACAGTC 1 chr19:37210614-37210694 ( 65) CCTCATTC 1 chr6:27420534-27420614 ( 37) TCACATTC 1 chr19:53116647-53116727 ( 35) TCACATTC 1 chr20:45084911-45084991 ( 23) TCACATTC 1 chr19:36940085-36940165 ( 17) TCACATTC 1 chr19:37904877-37904957 ( 33) CTACATTC 1 chr12:133502355-13350243 ( 7) CTACATTC 1 chr5:150330308-150330388 ( 70) CTACATTC 1 chr3:75786169-75786249 ( 62) CTACATTC 1 chr9:115759747-115759827 ( 65) CCACATGC 1 chr19:37038221-37038301 ( 40) CCACATGC 1 chr19:53669041-53669121 ( 67) CCACACTT 1 chr1:227842977-227843057 ( 63) CCTCACTC 1 chr1:227885226-227885306 ( 9) CCACATCC 1 chr16:68598350-68598430 ( 41) TCTCATTC 1 chr4:368497-368577 ( 12) CCATACTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.26361 E= 1.1e-070 -1293 212 -1293 -219 -1293 214 -1293 -251 173 -1293 -1293 -219 -1293 220 -1293 -450 183 -1293 -1293 -1293 -1293 -16 -246 140 -1293 -406 -304 172 -1293 181 -34 -192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 78 E= 1.1e-070 0.000000 0.935897 0.000000 0.064103 0.000000 0.948718 0.000000 0.051282 0.935897 0.000000 0.000000 0.064103 0.000000 0.987179 0.000000 0.012821 1.000000 0.000000 0.000000 0.000000 0.000000 0.192308 0.038462 0.769231 0.000000 0.012821 0.025641 0.961538 0.000000 0.756410 0.166667 0.076923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACATTC MEME-3 regular expression -------------------------------------------------------------------------------- CCACATTC -------------------------------------------------------------------------------- Time 11.59 secs. ******************************************************************************** ******************************************************************************** MOTIF GAATGTGG MEME-4 width = 8 sites = 69 llr = 636 E-value = 3.9e-067 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1a6::::1 pos.-specific C 1:1::1:: probability G 8:3:a:a9 matrix T :::a:9:: bits 2.2 * 2.0 * * 1.8 * ** ** 1.6 * ***** Relative 1.3 ** ***** Entropy 1.1 ** ***** (13.3 bits) 0.9 ** ***** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAATGTGG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:57529289-57529369 28 1.34e-05 CACTTGTGAA GAATGTGG CAAAGCCTTT chr19:19946341-19946421 71 1.34e-05 CAAATGTAAA GAATGTGG CA chr1:40961133-40961213 8 1.34e-05 ATGTGAG GAATGTGG GAAAGCCTTC chr19:40519867-40519947 55 1.34e-05 TAAATGTATG GAATGTGG AAAGGCCTTT chr19:52869749-52869829 8 1.34e-05 ATGTAAC GAATGTGG AAGAGCATTT chr19:38294219-38294299 48 1.34e-05 CAAATGTAAA GAATGTGG GAACGCCTTT chr19:57089387-57089467 31 1.34e-05 TGAATGTAAG GAATGTGG TAAGGCCTTC chr19:37368159-37368239 21 1.34e-05 TGAGTGTAAG GAATGTGG GAAAGCCTTT chr4:155293-155373 41 1.34e-05 CAAATGTGAA GAATGTGG TAAAGCCTTT chr3:44776314-44776394 11 1.34e-05 TAAATGTACA GAATGTGG CAAAGCCTTC chr1:227842977-227843057 31 1.34e-05 CAAATGTGAA GAATGTGG CAGAACCTTT chr19:44351515-44351595 37 1.34e-05 TGAGTGTAAG GAATGTGG GAAGACCTTT chr16:31927462-31927542 14 1.34e-05 CAAATGTGAA GAATGTGG CAAAGCCTTC chr19:52090426-52090506 5 1.34e-05 TTCT GAATGTGG GGGGAGCTTC chr16:31766623-31766703 7 1.34e-05 TGCAAA GAATGTGG CAAAGCCTTT chr3:44763577-44763657 47 1.34e-05 TAAATGCAAT GAATGTGG AAAGGGCTTT chr19:37619569-37619649 11 1.34e-05 TCAATGTAAG GAATGTGG GAAAGCCTTT chr5:140640662-140640742 59 1.34e-05 CGACTGTAAA GAATGTGG AAAATCCCTT chr4:155875-155955 47 1.34e-05 GAAATGTGAA GAATGTGG GAGCCTTTAA chr9:114304926-114305006 36 1.34e-05 TAAATGTGGC GAATGTGG AAAAGCCTTT chr16:68597763-68597843 35 1.34e-05 CCAGTGTAAG GAATGTGG GAAAGCCTTT chr19:38294010-38294090 5 1.34e-05 TGAA GAATGTGG GAAGGCCTTC chr7:63337177-63337257 42 1.34e-05 CACATGTGAA GAATGTGG CAAAACTTTT chr3:44762859-44762939 9 1.34e-05 CATGTGAG GAATGTGG GAAAGCCTTT chr19:37619196-37619276 48 1.34e-05 TGAATGTAAA GAATGTGG AAAAACCTTT chr7:56534417-56534497 72 1.34e-05 CACATGTGAA GAATGTGG C chr19:37734143-37734223 19 1.34e-05 TGAGTGCAAG GAATGTGG CAAAGCCTTT chrX:47272883-47272963 9 1.34e-05 AGTGTCAA GAATGTGG GAAAGCTTTC chr12:133682383-13368246 57 1.34e-05 TGCATGTAAG GAATGTGG CAAAACCTTT chr6:27368940-27369020 50 1.34e-05 TGAGTGCAGT GAATGTGG GAAAGTGTTC chr2:95880893-95880973 66 1.34e-05 TGAGTGTAAC GAATGTGG GAAAGCC chr9:130206938-130207018 50 2.35e-05 CAAGTGCAGC GAGTGTGG GAAGGCCTTC chr3:44612411-44612491 22 2.35e-05 TGAATGTAGC GAGTGTGG TAAGGCATTT chr8:145933383-145933463 73 2.35e-05 CAAATGCAGT GAGTGTGG chr19:7083484-7083564 32 2.35e-05 CACATGTAAT GAGTGTGG GAAATCCTTT chr8:125989141-125989221 27 2.35e-05 CAAATGTCCC GAGTGTGG GAAGAGATTC chr19:35434778-35434858 50 2.35e-05 TGAATGTAAG GAGTGTGG GAAGTCCTTC chr17:4995645-4995725 7 2.35e-05 TGCAAT GAGTGTGG CAAAGCCTTC chr19:58724241-58724321 5 2.35e-05 TCAG GAGTGTGG GAGGACCTTC chr12:133635226-13363530 50 2.35e-05 TGAATGCAGT GAGTGTGG CAAAGCTTTC chr19:37211417-37211497 70 2.35e-05 TGTTTGTAAT GAGTGTGG TAA chr7:57342425-57342505 5 2.35e-05 TGAA GAGTGTGG AATAGCTTTT chr5:178506444-178506524 67 2.35e-05 TAAATGTAGT GAGTGTGG GAAGGG chr19:54080519-54080599 34 3.37e-05 CGAATGCAAA GACTGTGG GAAGACCTTT chr16:68598350-68598430 9 3.37e-05 AATGTATT GACTGTGG GAAAGCCTTT chr12:133779967-13378004 67 3.37e-05 TGAATGCACC GACTGTGG AAAGGC chr7:56007367-56007447 36 4.74e-05 TAAATGTAAT CAATGTGG TAAAGCTTTT chr19:35434991-35435071 5 5.73e-05 CAAG GAATGCGG GAGAACCTTC chr12:133780438-13378051 16 5.73e-05 TGAGTGCAGG GAATGCGG GAAATCCTTT chr5:178359592-178359672 46 5.73e-05 TCAGTGTAAT GAATGCGG AAAAGCCTTC chr5:179686044-179686124 3 7.53e-05 aa aaaTGTGG TAACACCTTC chr14:50938712-50938792 1 7.53e-05 . AAATGTGG TAAATCCTCC chr10:44112424-44112504 55 7.53e-05 TCACTGCAGT AAATGTGG AAAATCTTTC chr12:133732868-13373294 21 8.55e-05 CACATGTAAT CAGTGTGG GAAATCTTTT chr19:2834585-2834665 50 8.55e-05 TGAATGTAAG CAGTGTGG GAGAGCCTTC chr20:60684515-60684595 45 8.55e-05 gtaatcagag cagtgtgg tgctagaata chr19:9492193-9492273 12 8.55e-05 TGAGTGTAAC CAGTGTGG AAAGTCCTTC chr19:2834375-2834455 8 1.11e-04 GTGCGGT GAGTGCGG GAAAGCCTTC chr8:145933174-145933254 30 1.11e-04 TAGGTGGGAT GAATGTGA CAAAGCCTTT chr7:6714727-6714807 48 1.11e-04 TGGATGCAAT GAATGTGA GAAGTCCTTC chr12:133682992-13368307 36 1.11e-04 TGCGTGTGCT GAATGTGA TAAAGCCTTC chr16:31766824-31766904 58 1.25e-04 TATATGTAAG GATTGTGG CATCTCCTTT chr19:14829490-14829570 9 1.25e-04 AGTGTAAA GATTGTGG GAAAGCCTTC chr19:9453516-9453596 16 1.38e-04 TAAATGTCAA AAGTGTGG GCAAGCCTTC chr3:44763782-44763862 10 1.52e-04 AAATGTAGT GAGTGTGA GAAAACCTTC chr19:56935400-56935480 29 1.70e-04 TATGTGTAAG GAATGTAG GAAAACATTT chr4:367048-367128 37 1.70e-04 CACATGTGAA GAATGTAG GAAAATCTTT chr19:35250270-35250350 13 1.80e-04 GGTTTTTGTC CACTGTGG GTCCTATTAT chr5:140144041-140144121 73 2.15e-04 AAAATGTAAG AACTGTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:57529289-57529369 1.3e-05 27_[+4]_45 chr19:19946341-19946421 1.3e-05 70_[+4]_2 chr1:40961133-40961213 1.3e-05 7_[+4]_65 chr19:40519867-40519947 1.3e-05 54_[+4]_18 chr19:52869749-52869829 1.3e-05 7_[+4]_65 chr19:38294219-38294299 1.3e-05 47_[+4]_25 chr19:57089387-57089467 1.3e-05 30_[+4]_42 chr19:37368159-37368239 1.3e-05 20_[+4]_52 chr4:155293-155373 1.3e-05 40_[+4]_32 chr3:44776314-44776394 1.3e-05 10_[+4]_62 chr1:227842977-227843057 1.3e-05 30_[+4]_42 chr19:44351515-44351595 1.3e-05 36_[+4]_36 chr16:31927462-31927542 1.3e-05 13_[+4]_59 chr19:52090426-52090506 1.3e-05 4_[+4]_68 chr16:31766623-31766703 1.3e-05 6_[+4]_66 chr3:44763577-44763657 1.3e-05 46_[+4]_26 chr19:37619569-37619649 1.3e-05 10_[+4]_62 chr5:140640662-140640742 1.3e-05 58_[+4]_14 chr4:155875-155955 1.3e-05 46_[+4]_26 chr9:114304926-114305006 1.3e-05 35_[+4]_37 chr16:68597763-68597843 1.3e-05 34_[+4]_38 chr19:38294010-38294090 1.3e-05 4_[+4]_68 chr7:63337177-63337257 1.3e-05 41_[+4]_31 chr3:44762859-44762939 1.3e-05 8_[+4]_64 chr19:37619196-37619276 1.3e-05 47_[+4]_25 chr7:56534417-56534497 1.3e-05 71_[+4]_1 chr19:37734143-37734223 1.3e-05 18_[+4]_54 chrX:47272883-47272963 1.3e-05 8_[+4]_64 chr12:133682383-13368246 1.3e-05 56_[+4]_16 chr6:27368940-27369020 1.3e-05 49_[+4]_23 chr2:95880893-95880973 1.3e-05 65_[+4]_7 chr9:130206938-130207018 2.3e-05 49_[+4]_23 chr3:44612411-44612491 2.3e-05 21_[+4]_51 chr8:145933383-145933463 2.3e-05 72_[+4] chr19:7083484-7083564 2.3e-05 31_[+4]_41 chr8:125989141-125989221 2.3e-05 26_[+4]_46 chr19:35434778-35434858 2.3e-05 49_[+4]_23 chr17:4995645-4995725 2.3e-05 6_[+4]_66 chr19:58724241-58724321 2.3e-05 4_[+4]_68 chr12:133635226-13363530 2.3e-05 49_[+4]_23 chr19:37211417-37211497 2.3e-05 69_[+4]_3 chr7:57342425-57342505 2.3e-05 4_[+4]_68 chr5:178506444-178506524 2.3e-05 66_[+4]_6 chr19:54080519-54080599 3.4e-05 33_[+4]_39 chr16:68598350-68598430 3.4e-05 8_[+4]_64 chr12:133779967-13378004 3.4e-05 66_[+4]_6 chr7:56007367-56007447 4.7e-05 35_[+4]_37 chr19:35434991-35435071 5.7e-05 4_[+4]_68 chr12:133780438-13378051 5.7e-05 15_[+4]_57 chr5:178359592-178359672 5.7e-05 45_[+4]_27 chr5:179686044-179686124 7.5e-05 2_[+4]_70 chr14:50938712-50938792 7.5e-05 [+4]_72 chr10:44112424-44112504 7.5e-05 54_[+4]_18 chr12:133732868-13373294 8.6e-05 20_[+4]_52 chr19:2834585-2834665 8.6e-05 49_[+4]_23 chr20:60684515-60684595 8.6e-05 44_[+4]_28 chr19:9492193-9492273 8.6e-05 11_[+4]_61 chr19:2834375-2834455 0.00011 7_[+4]_65 chr8:145933174-145933254 0.00011 29_[+4]_43 chr7:6714727-6714807 0.00011 47_[+4]_25 chr12:133682992-13368307 0.00011 35_[+4]_37 chr16:31766824-31766904 0.00012 57_[+4]_15 chr19:14829490-14829570 0.00012 8_[+4]_64 chr19:9453516-9453596 0.00014 15_[+4]_57 chr3:44763782-44763862 0.00015 9_[+4]_63 chr19:56935400-56935480 0.00017 28_[+4]_44 chr4:367048-367128 0.00017 36_[+4]_36 chr19:35250270-35250350 0.00018 12_[+4]_60 chr5:140144041-140144121 0.00021 72_[+4] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAATGTGG width=8 seqs=69 chr7:57529289-57529369 ( 28) GAATGTGG 1 chr19:19946341-19946421 ( 71) GAATGTGG 1 chr1:40961133-40961213 ( 8) GAATGTGG 1 chr19:40519867-40519947 ( 55) GAATGTGG 1 chr19:52869749-52869829 ( 8) GAATGTGG 1 chr19:38294219-38294299 ( 48) GAATGTGG 1 chr19:57089387-57089467 ( 31) GAATGTGG 1 chr19:37368159-37368239 ( 21) GAATGTGG 1 chr4:155293-155373 ( 41) GAATGTGG 1 chr3:44776314-44776394 ( 11) GAATGTGG 1 chr1:227842977-227843057 ( 31) GAATGTGG 1 chr19:44351515-44351595 ( 37) GAATGTGG 1 chr16:31927462-31927542 ( 14) GAATGTGG 1 chr19:52090426-52090506 ( 5) GAATGTGG 1 chr16:31766623-31766703 ( 7) GAATGTGG 1 chr3:44763577-44763657 ( 47) GAATGTGG 1 chr19:37619569-37619649 ( 11) GAATGTGG 1 chr5:140640662-140640742 ( 59) GAATGTGG 1 chr4:155875-155955 ( 47) GAATGTGG 1 chr9:114304926-114305006 ( 36) GAATGTGG 1 chr16:68597763-68597843 ( 35) GAATGTGG 1 chr19:38294010-38294090 ( 5) GAATGTGG 1 chr7:63337177-63337257 ( 42) GAATGTGG 1 chr3:44762859-44762939 ( 9) GAATGTGG 1 chr19:37619196-37619276 ( 48) GAATGTGG 1 chr7:56534417-56534497 ( 72) GAATGTGG 1 chr19:37734143-37734223 ( 19) GAATGTGG 1 chrX:47272883-47272963 ( 9) GAATGTGG 1 chr12:133682383-13368246 ( 57) GAATGTGG 1 chr6:27368940-27369020 ( 50) GAATGTGG 1 chr2:95880893-95880973 ( 66) GAATGTGG 1 chr9:130206938-130207018 ( 50) GAGTGTGG 1 chr3:44612411-44612491 ( 22) GAGTGTGG 1 chr8:145933383-145933463 ( 73) GAGTGTGG 1 chr19:7083484-7083564 ( 32) GAGTGTGG 1 chr8:125989141-125989221 ( 27) GAGTGTGG 1 chr19:35434778-35434858 ( 50) GAGTGTGG 1 chr17:4995645-4995725 ( 7) GAGTGTGG 1 chr19:58724241-58724321 ( 5) GAGTGTGG 1 chr12:133635226-13363530 ( 50) GAGTGTGG 1 chr19:37211417-37211497 ( 70) GAGTGTGG 1 chr7:57342425-57342505 ( 5) GAGTGTGG 1 chr5:178506444-178506524 ( 67) GAGTGTGG 1 chr19:54080519-54080599 ( 34) GACTGTGG 1 chr16:68598350-68598430 ( 9) GACTGTGG 1 chr12:133779967-13378004 ( 67) GACTGTGG 1 chr7:56007367-56007447 ( 36) CAATGTGG 1 chr19:35434991-35435071 ( 5) GAATGCGG 1 chr12:133780438-13378051 ( 16) GAATGCGG 1 chr5:178359592-178359672 ( 46) GAATGCGG 1 chr5:179686044-179686124 ( 3) AAATGTGG 1 chr14:50938712-50938792 ( 1) AAATGTGG 1 chr10:44112424-44112504 ( 55) AAATGTGG 1 chr12:133732868-13373294 ( 21) CAGTGTGG 1 chr19:2834585-2834665 ( 50) CAGTGTGG 1 chr20:60684515-60684595 ( 45) CAGTGTGG 1 chr19:9492193-9492273 ( 12) CAGTGTGG 1 chr19:2834375-2834455 ( 8) GAGTGCGG 1 chr8:145933174-145933254 ( 30) GAATGTGA 1 chr7:6714727-6714807 ( 48) GAATGTGA 1 chr12:133682992-13368307 ( 36) GAATGTGA 1 chr16:31766824-31766904 ( 58) GATTGTGG 1 chr19:14829490-14829570 ( 9) GATTGTGG 1 chr19:9453516-9453596 ( 16) AAGTGTGG 1 chr3:44763782-44763862 ( 10) GAGTGTGA 1 chr19:56935400-56935480 ( 29) GAATGTAG 1 chr4:367048-367128 ( 37) GAATGTAG 1 chr19:35250270-35250350 ( 13) CACTGTGG 1 chr5:140144041-140144121 ( 73) AACTGTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.81773 E= 3.9e-067 -196 -131 199 -1275 183 -1275 -1275 -1275 114 -157 38 -333 -1275 -1275 -1275 178 -1275 -1275 224 -1275 -1275 -189 -1275 169 -328 -1275 220 -1275 -228 -1275 216 -1275 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 69 E= 3.9e-067 0.072464 0.086957 0.840580 0.000000 1.000000 0.000000 0.000000 0.000000 0.623188 0.072464 0.275362 0.028986 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.057971 0.000000 0.942029 0.028986 0.000000 0.971014 0.000000 0.057971 0.000000 0.942029 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGTGG MEME-4 regular expression -------------------------------------------------------------------------------- GA[AG]TGTGG -------------------------------------------------------------------------------- Time 14.62 secs. ******************************************************************************** ******************************************************************************** MOTIF ACTGGAGA MEME-5 width = 8 sites = 71 llr = 634 E-value = 4.6e-061 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 9:2::6:9 pos.-specific C :a:::::: probability G 1::aa1a: matrix T ::8::2:: bits 2.2 ** * 2.0 * ** * 1.8 * ** * 1.6 * ** * Relative 1.3 ** ** ** Entropy 1.1 ** ** ** (12.9 bits) 0.9 ***** ** 0.7 ***** ** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACTGGAGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:57529289-57529369 1 1.32e-05 . ACTGGAGA GAAACCCTAC chr19:19946341-19946421 44 1.32e-05 GAGAATTCAT ACTGGAGA GAAGCCCTAC chr19:14829490-14829570 66 1.32e-05 GAGAACTCAC ACTGGAGA GAAGCCC chr3:13943293-13943373 31 1.32e-05 GAGAAGTCAT ACTGGAGA GAATTTTTAT chr19:52869749-52869829 65 1.32e-05 TCTAATCCAT ACTGGAGA GAAACCTT chr2:106823800-106823880 64 1.32e-05 GAGAACTCAC ACTGGAGA GGAGCCCTT chr19:7083484-7083564 5 1.32e-05 TCAT ACTGGAGA AAAACCCTAC chr1:227842977-227843057 4 1.32e-05 CAT ACTGGAGA GAAACCCTAC chr19:56935400-56935480 2 1.32e-05 T ACTGGAGA AAAACCCTAT chr16:68598350-68598430 66 1.32e-05 GAGAACTCAT ACTGGAGA GAAGCCC chr16:31927462-31927542 71 1.32e-05 GAGAAGTCAT ACTGGAGA GA chr17:4995645-4995725 64 1.32e-05 GAAAATTCAT ACTGGAGA AAAACCATA chr18:32886663-32886743 69 1.32e-05 AAGGATCCAC ACTGGAGA GAAA chr19:19946656-19946736 65 1.32e-05 GAGAATTCAT ACTGGAGA GAAACCTT chr3:44763577-44763657 20 1.32e-05 GAGAAGTCAC ACTGGAGA AAAACCCTAT chr8:145933174-145933254 3 1.32e-05 AT ACTGGAGA AAAGCCCTAT chr19:37619569-37619649 68 1.32e-05 GCGAATTCAC ACTGGAGA AAAAC chr5:178359378-178359458 65 1.32e-05 GGTCATTCAC ACTGGAGA GAAACCTT chr17:4996001-4996081 44 1.32e-05 GAGAATTCAT ACTGGAGA GAAACCCCAT chr9:114304926-114305006 9 1.32e-05 GAATTCAT ACTGGAGA GAAACCCTAT chr8:196128-196208 43 1.32e-05 GAGAACTCAC ACTGGAGA GAAACCATAT chr19:58678301-58678381 59 1.32e-05 GAGGACTCAT ACTGGAGA ACACTATGAA chr5:178392575-178392655 49 1.32e-05 GAAAATTCAC ACTGGAGA GAAACCTTAC chr12:133682992-13368307 9 1.32e-05 AGAGTCAC ACTGGAGA GAAACCCTAT chr10:44020091-44020171 47 1.32e-05 GAGAACTCAT ACTGGAGA AAGGCCCTGT chr8:146067784-146067864 14 1.32e-05 GCTGATTCAC ACTGGAGA GAAGCCTTAT chr12:133682383-13368246 30 1.32e-05 GAGGACTCAT ACTGGAGA GAAACCATAT chr7:56007367-56007447 9 1.32e-05 GGATTCAT ACTGGAGA AAAGCCCTAT chr1:40961133-40961213 65 3.68e-05 TAGAACTCAC ACTGGGGA GAAACCCT chr19:40519867-40519947 28 3.68e-05 GAGAATTCAC ACTGGTGA GAGACCCTAT chr19:38294219-38294299 21 3.68e-05 CAGAATTCAT ACTGGTGA AAAACCCTAC chr19:57089387-57089467 4 3.68e-05 CAC ACTGGGGA GAAACCTTAT chr14:50938712-50938792 58 3.68e-05 GAGAACTCAT ACTGGTGA TAAACTTTAT chr10:44112424-44112504 28 3.68e-05 AAGAATGCAT ACTGGGGA GAAACCCTAT chr19:44351515-44351595 10 3.68e-05 AGATTTCAT ACTGGTGA GAAACCCTAT chr19:58773816-58773896 35 3.68e-05 GCAAATTCAC ACTGGGGA GAAGCCGTAC chr3:44763782-44763862 67 3.68e-05 CAGAATTCAC ACTGGTGA GAAGCC chr19:9453516-9453596 73 3.68e-05 GAGAACTCAC ACTGGTGA chr19:38294010-38294090 62 3.68e-05 AAGAGTTCAT ACTGGTGA GAAATCCTAT chr7:6714727-6714807 21 3.68e-05 GAGAACTCAC ACTGGGGA GAAACCCTGT chr19:37619196-37619276 21 3.68e-05 GAGGATTCAT ACTGGTGA GAAACCCTAT chr6:27368940-27369020 23 3.68e-05 GAGAACACAC ACTGGGGA GAACCCCTAT chr2:95880893-95880973 39 3.68e-05 GAGAACTCAT ACTGGGGA GCGGCCATAT chr19:9492193-9492273 69 3.68e-05 GAGAACTCAC ACTGGTGA GAAA chr12:133780438-13378051 73 4.96e-05 GAGAATTCAC ACAGGAGA chr12:133635226-13363530 23 4.96e-05 GAGAATACAT ACAGGAGA GAAGCCTTTT chr5:178359592-178359672 19 4.96e-05 GAGAACTCAT ACAGGAGA GAAACCCTAT chr16:75203995-75204075 52 4.96e-05 GAGAACTCAT ACAGGAGA GAAACCCTAT chr4:367048-367128 10 5.95e-05 AGAATTCAT GCTGGAGA GAAACCCATC chr16:31766623-31766703 64 6.92e-05 AAGAATTCAT ACCGGAGA GAAACCCTA chr19:35434991-35435071 62 7.93e-05 AAGACTTCAC ACTGGCGA GAAGCCCTAT chr19:35434778-35434858 23 7.93e-05 GAGAATTCAT ACTGGCGA GAAACCCTAT chr8:125989346-125989426 47 1.02e-04 GCGGACACAC ACAGGTGA GAAGCCCTAC chr3:13944389-13944469 49 1.02e-04 GAGAACTCAT ACAGGTGA AAAGCCAGTT chr19:37211417-37211497 43 1.02e-04 GAGAACTCAC ACAGGTGA GAAACCCTAT chr5:178506444-178506524 40 1.02e-04 AAGAATCCAT ACAGGTGA GAAACCCTAT chr19:37210614-37210694 6 1.02e-04 CACAC ACAGGGGA GAAATCGTAT chr1:40929013-40929093 51 1.16e-04 GAGAGTCCAT ACTGGAGT AAAACCTTAT chr12:133780236-13378031 23 1.16e-04 AGGAGTGCAC ACTGGAGT AAAACCCTAT chr3:44762859-44762939 66 1.16e-04 AAGAATTCAC ACTGGAGT GAAACCA chr4:368497-368577 49 1.26e-04 GAGAACTCAT ACTGGAGG AAAGTCTTAC chr4:155875-155955 20 1.26e-04 GAGAACTCAT ACTGGAGG AAAATTTTAG chr13:90501810-90501890 28 1.61e-04 gattactaca attggaga tgagatttgg chr22:22517833-22517913 70 1.61e-04 TTCTTATCCC ATTGGAGA TAT chr22:23025147-23025227 10 1.61e-04 TGCCtgtgt gctggtga gtatgcatgt chr9:130206938-130207018 23 1.79e-04 GAGGACTCAC ACCGGGGA GAAGCCCTAC chr19:2834375-2834455 65 1.79e-04 GAGGATTCAC ACCGGGGA AAAGCCCT chr8:18035669-18035749 10 2.15e-04 AACTTAAGA GCAGGAGA TGCAAGAACT chr3:44776314-44776394 68 2.15e-04 GAGAAGTCAT TCTGGAGA TAAAC chr12:133779967-13378004 40 2.15e-04 GAGAACTCAT GCAGGAGA GAAGCCTTAT chr16:68598054-68598134 53 2.15e-04 GAGGATCCAT ACTGCAGA GAACCCCTAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:57529289-57529369 1.3e-05 [+5]_72 chr19:19946341-19946421 1.3e-05 43_[+5]_29 chr19:14829490-14829570 1.3e-05 65_[+5]_7 chr3:13943293-13943373 1.3e-05 30_[+5]_42 chr19:52869749-52869829 1.3e-05 64_[+5]_8 chr2:106823800-106823880 1.3e-05 63_[+5]_9 chr19:7083484-7083564 1.3e-05 4_[+5]_68 chr1:227842977-227843057 1.3e-05 3_[+5]_69 chr19:56935400-56935480 1.3e-05 1_[+5]_71 chr16:68598350-68598430 1.3e-05 65_[+5]_7 chr16:31927462-31927542 1.3e-05 70_[+5]_2 chr17:4995645-4995725 1.3e-05 63_[+5]_9 chr18:32886663-32886743 1.3e-05 68_[+5]_4 chr19:19946656-19946736 1.3e-05 64_[+5]_8 chr3:44763577-44763657 1.3e-05 19_[+5]_53 chr8:145933174-145933254 1.3e-05 2_[+5]_70 chr19:37619569-37619649 1.3e-05 67_[+5]_5 chr5:178359378-178359458 1.3e-05 64_[+5]_8 chr17:4996001-4996081 1.3e-05 43_[+5]_29 chr9:114304926-114305006 1.3e-05 8_[+5]_64 chr8:196128-196208 1.3e-05 42_[+5]_30 chr19:58678301-58678381 1.3e-05 58_[+5]_14 chr5:178392575-178392655 1.3e-05 48_[+5]_24 chr12:133682992-13368307 1.3e-05 8_[+5]_64 chr10:44020091-44020171 1.3e-05 46_[+5]_26 chr8:146067784-146067864 1.3e-05 13_[+5]_59 chr12:133682383-13368246 1.3e-05 29_[+5]_43 chr7:56007367-56007447 1.3e-05 8_[+5]_64 chr1:40961133-40961213 3.7e-05 64_[+5]_8 chr19:40519867-40519947 3.7e-05 27_[+5]_45 chr19:38294219-38294299 3.7e-05 20_[+5]_52 chr19:57089387-57089467 3.7e-05 3_[+5]_69 chr14:50938712-50938792 3.7e-05 57_[+5]_15 chr10:44112424-44112504 3.7e-05 27_[+5]_45 chr19:44351515-44351595 3.7e-05 9_[+5]_63 chr19:58773816-58773896 3.7e-05 34_[+5]_38 chr3:44763782-44763862 3.7e-05 66_[+5]_6 chr19:9453516-9453596 3.7e-05 72_[+5] chr19:38294010-38294090 3.7e-05 61_[+5]_11 chr7:6714727-6714807 3.7e-05 20_[+5]_52 chr19:37619196-37619276 3.7e-05 20_[+5]_52 chr6:27368940-27369020 3.7e-05 22_[+5]_50 chr2:95880893-95880973 3.7e-05 38_[+5]_34 chr19:9492193-9492273 3.7e-05 68_[+5]_4 chr12:133780438-13378051 5e-05 72_[+5] chr12:133635226-13363530 5e-05 22_[+5]_50 chr5:178359592-178359672 5e-05 18_[+5]_54 chr16:75203995-75204075 5e-05 51_[+5]_21 chr4:367048-367128 5.9e-05 9_[+5]_63 chr16:31766623-31766703 6.9e-05 63_[+5]_9 chr19:35434991-35435071 7.9e-05 61_[+5]_11 chr19:35434778-35434858 7.9e-05 22_[+5]_50 chr8:125989346-125989426 0.0001 46_[+5]_26 chr3:13944389-13944469 0.0001 48_[+5]_24 chr19:37211417-37211497 0.0001 42_[+5]_30 chr5:178506444-178506524 0.0001 39_[+5]_33 chr19:37210614-37210694 0.0001 5_[+5]_67 chr1:40929013-40929093 0.00012 50_[+5]_22 chr12:133780236-13378031 0.00012 22_[+5]_50 chr3:44762859-44762939 0.00012 65_[+5]_7 chr4:368497-368577 0.00013 48_[+5]_24 chr4:155875-155955 0.00013 19_[+5]_53 chr13:90501810-90501890 0.00016 27_[+5]_45 chr22:22517833-22517913 0.00016 69_[+5]_3 chr22:23025147-23025227 0.00016 9_[+5]_63 chr9:130206938-130207018 0.00018 22_[+5]_50 chr19:2834375-2834455 0.00018 64_[+5]_8 chr8:18035669-18035749 0.00022 9_[+5]_63 chr3:44776314-44776394 0.00022 67_[+5]_5 chr12:133779967-13378004 0.00022 39_[+5]_33 chr16:68598054-68598134 0.00022 52_[+5]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTGGAGA width=8 seqs=71 chr7:57529289-57529369 ( 1) ACTGGAGA 1 chr19:19946341-19946421 ( 44) ACTGGAGA 1 chr19:14829490-14829570 ( 66) ACTGGAGA 1 chr3:13943293-13943373 ( 31) ACTGGAGA 1 chr19:52869749-52869829 ( 65) ACTGGAGA 1 chr2:106823800-106823880 ( 64) ACTGGAGA 1 chr19:7083484-7083564 ( 5) ACTGGAGA 1 chr1:227842977-227843057 ( 4) ACTGGAGA 1 chr19:56935400-56935480 ( 2) ACTGGAGA 1 chr16:68598350-68598430 ( 66) ACTGGAGA 1 chr16:31927462-31927542 ( 71) ACTGGAGA 1 chr17:4995645-4995725 ( 64) ACTGGAGA 1 chr18:32886663-32886743 ( 69) ACTGGAGA 1 chr19:19946656-19946736 ( 65) ACTGGAGA 1 chr3:44763577-44763657 ( 20) ACTGGAGA 1 chr8:145933174-145933254 ( 3) ACTGGAGA 1 chr19:37619569-37619649 ( 68) ACTGGAGA 1 chr5:178359378-178359458 ( 65) ACTGGAGA 1 chr17:4996001-4996081 ( 44) ACTGGAGA 1 chr9:114304926-114305006 ( 9) ACTGGAGA 1 chr8:196128-196208 ( 43) ACTGGAGA 1 chr19:58678301-58678381 ( 59) ACTGGAGA 1 chr5:178392575-178392655 ( 49) ACTGGAGA 1 chr12:133682992-13368307 ( 9) ACTGGAGA 1 chr10:44020091-44020171 ( 47) ACTGGAGA 1 chr8:146067784-146067864 ( 14) ACTGGAGA 1 chr12:133682383-13368246 ( 30) ACTGGAGA 1 chr7:56007367-56007447 ( 9) ACTGGAGA 1 chr1:40961133-40961213 ( 65) ACTGGGGA 1 chr19:40519867-40519947 ( 28) ACTGGTGA 1 chr19:38294219-38294299 ( 21) ACTGGTGA 1 chr19:57089387-57089467 ( 4) ACTGGGGA 1 chr14:50938712-50938792 ( 58) ACTGGTGA 1 chr10:44112424-44112504 ( 28) ACTGGGGA 1 chr19:44351515-44351595 ( 10) ACTGGTGA 1 chr19:58773816-58773896 ( 35) ACTGGGGA 1 chr3:44763782-44763862 ( 67) ACTGGTGA 1 chr19:9453516-9453596 ( 73) ACTGGTGA 1 chr19:38294010-38294090 ( 62) ACTGGTGA 1 chr7:6714727-6714807 ( 21) ACTGGGGA 1 chr19:37619196-37619276 ( 21) ACTGGTGA 1 chr6:27368940-27369020 ( 23) ACTGGGGA 1 chr2:95880893-95880973 ( 39) ACTGGGGA 1 chr19:9492193-9492273 ( 69) ACTGGTGA 1 chr12:133780438-13378051 ( 73) ACAGGAGA 1 chr12:133635226-13363530 ( 23) ACAGGAGA 1 chr5:178359592-178359672 ( 19) ACAGGAGA 1 chr16:75203995-75204075 ( 52) ACAGGAGA 1 chr4:367048-367128 ( 10) GCTGGAGA 1 chr16:31766623-31766703 ( 64) ACCGGAGA 1 chr19:35434991-35435071 ( 62) ACTGGCGA 1 chr19:35434778-35434858 ( 23) ACTGGCGA 1 chr8:125989346-125989426 ( 47) ACAGGTGA 1 chr3:13944389-13944469 ( 49) ACAGGTGA 1 chr19:37211417-37211497 ( 43) ACAGGTGA 1 chr5:178506444-178506524 ( 40) ACAGGTGA 1 chr19:37210614-37210694 ( 6) ACAGGGGA 1 chr1:40929013-40929093 ( 51) ACTGGAGT 1 chr12:133780236-13378031 ( 23) ACTGGAGT 1 chr3:44762859-44762939 ( 66) ACTGGAGT 1 chr4:368497-368577 ( 49) ACTGGAGG 1 chr4:155875-155955 ( 20) ACTGGAGG 1 chr13:90501810-90501890 ( 28) ATTGGAGA 1 chr22:22517833-22517913 ( 70) ATTGGAGA 1 chr22:23025147-23025227 ( 10) GCTGGTGA 1 chr9:130206938-130207018 ( 23) ACCGGGGA 1 chr19:2834375-2834455 ( 65) ACCGGGGA 1 chr8:18035669-18035749 ( 10) GCAGGAGA 1 chr3:44776314-44776394 ( 68) TCTGGAGA 1 chr12:133779967-13378004 ( 40) GCAGGAGA 1 chr16:68598054-68598134 ( 53) ACTGCAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.11921 E= 4.6e-061 172 -1279 -191 -437 -1279 218 -1279 -337 -86 -235 -1279 146 -1279 -1279 224 -1279 -1279 -393 222 -1279 117 -293 -59 -57 -1279 -1279 224 -1279 172 -1279 -291 -279 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 71 E= 4.6e-061 0.929577 0.000000 0.056338 0.014085 0.000000 0.971831 0.000000 0.028169 0.154930 0.042254 0.000000 0.802817 0.000000 0.000000 1.000000 0.000000 0.000000 0.014085 0.985915 0.000000 0.633803 0.028169 0.140845 0.197183 0.000000 0.000000 1.000000 0.000000 0.929577 0.000000 0.028169 0.042254 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTGGAGA MEME-5 regular expression -------------------------------------------------------------------------------- ACTGGAGA -------------------------------------------------------------------------------- Time 17.45 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:9492193-9492273 2.93e-06 11_[+4(8.55e-05)]_41_[+1(9.43e-05)]_\ [+5(3.68e-05)]_4 chr2:95880893-95880973 2.66e-05 38_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 7 chr6:27368940-27369020 2.84e-04 22_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 23 chr12:133503168-13350324 1.34e-02 80 chr16:75203995-75204075 1.79e-04 17_[+1(9.43e-05)]_26_[+5(4.96e-05)]_\ 21 chr19:58619295-58619375 3.68e-02 80 chr19:37210614-37210694 6.27e-05 64_[+3(9.50e-05)]_8 chr7:56007367-56007447 6.72e-07 8_[+5(1.32e-05)]_[+2(7.83e-05)]_11_\ [+4(4.74e-05)]_37 chr19:52497538-52497618 5.48e-04 30_[+1(6.64e-05)]_42 chr12:133682383-13368246 7.29e-07 29_[+5(1.32e-05)]_19_[+4(1.34e-05)]_\ 16 chr19:35250270-35250350 2.52e-05 56_[+2(1.86e-05)]_1_[+3(1.45e-05)]_\ 7 chr16:68598054-68598134 8.25e-04 80 chr11:117958255-11795833 2.14e-02 80 chrX:47272883-47272963 5.86e-05 8_[+4(1.34e-05)]_41_[+1(9.43e-05)]_\ 15 chr12:133697209-13369728 7.03e-03 66_[+3(6.95e-05)]_6 chr19:37734143-37734223 1.01e-06 18_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 32_[+1(3.80e-05)]_5 chr9:115805181-115805261 1.12e-05 17_[+1(6.64e-05)]_29_[+2(3.70e-05)]_\ 2_[+3(1.45e-05)]_8 chr19:53669041-53669121 4.28e-03 56_[+2(3.70e-05)]_16 chr7:56534417-56534497 1.58e-04 71_[+4(1.34e-05)]_1 chr20:60684515-60684595 1.37e-02 14_[+1(9.43e-05)]_22_[+4(8.55e-05)]_\ 28 chr5:178506444-178506524 3.64e-05 66_[+4(2.35e-05)]_6 chr19:37619196-37619276 2.20e-06 20_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 25 chr10:132081610-13208169 2.97e-04 17_[+1(6.64e-05)]_39_[+3(1.45e-05)]_\ 8 chr19:9406156-9406236 1.42e-04 51_[+2(3.70e-05)]_2_[+3(1.45e-05)]_\ 11 chr9:125489222-125489302 8.88e-02 66_[+1(6.64e-05)]_6 chr5:179685633-179685713 9.65e-04 30_[+2(3.70e-05)]_42 chr18:60356161-60356241 5.29e-02 66_[+1(6.64e-05)]_6 chr3:75786169-75786249 4.00e-02 80 chr13:49548119-49548199 4.47e-02 80 chr7:57342425-57342505 2.24e-04 4_[+4(2.35e-05)]_68 chr3:44762859-44762939 2.71e-08 8_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 32_[+1(3.80e-05)]_15 chr19:52977287-52977367 9.32e-05 15_[+3(1.45e-05)]_29_[+1(3.80e-05)]_\ 20 chr8:146067784-146067864 6.21e-06 13_[+5(1.32e-05)]_[+2(5.09e-05)]_20_\ [+2(1.86e-05)]_23 chr19:35250524-35250604 6.50e-05 63_[+3(1.45e-05)]_9 chr10:44020091-44020171 2.63e-05 46_[+5(1.32e-05)]_26 chr19:58619940-58620020 1.37e-03 [+3(9.50e-05)]_72 chr19:37310128-37310208 7.25e-04 2_[+3(1.45e-05)]_29_[+1(3.80e-05)]_\ 33 chr12:133682992-13368307 4.58e-07 8_[+5(1.32e-05)]_28_[+2(1.86e-05)]_\ 15_[+3(9.50e-05)]_5 chr9:99580958-99581038 2.81e-04 80 chr5:178392575-178392655 2.97e-05 48_[+5(1.32e-05)]_24 chr19:58678301-58678381 3.42e-03 58_[+5(1.32e-05)]_14 chr3:44540787-44540867 4.39e-04 10_[+4(8.55e-05)]_35_[+2(3.70e-05)]_\ 19 chr1:247150576-247150656 1.42e-02 36_[+1(3.80e-05)]_36 chr16:57251038-57251118 2.51e-01 80 chr2:102762565-102762645 1.05e-01 80 chr19:38055658-38055738 7.22e-05 17_[+1(6.64e-05)]_30_[+2(1.86e-05)]_\ 1_[+3(6.95e-05)]_8 chr19:36884361-36884441 1.65e-04 7_[+2(3.70e-05)]_2_[+3(2.52e-05)]_\ 55 chr8:196128-196208 4.11e-05 34_[+1(9.43e-05)]_[+5(1.32e-05)]_30 chr19:52618967-52619047 4.12e-03 37_[+3(1.45e-05)]_35 chr7:6714727-6714807 3.02e-06 12_[+1(9.43e-05)]_[+5(3.68e-05)]_52 chr7:57233278-57233358 1.10e-03 30_[+1(6.64e-05)]_29_[+2(5.09e-05)]_\ 5 chr12:133779967-13378004 1.85e-05 47_[+2(5.09e-05)]_11_[+4(3.37e-05)]_\ 6 chr17:16455442-16455522 1.07e-01 80 chr7:63337177-63337257 1.75e-04 41_[+4(1.34e-05)]_31 chr11:16452367-16452447 1.61e-01 80 chr5:150311106-150311186 1.87e-05 13_[+2(1.86e-05)]_2_[+3(1.45e-05)]_\ 29_[+1(6.64e-05)]_12 chr19:38294010-38294090 5.86e-07 4_[+4(1.34e-05)]_1_[+2(9.23e-05)]_\ 40_[+5(3.68e-05)]_11 chr2:171767973-171768053 1.01e-02 80 chr16:68597763-68597843 2.37e-04 34_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 29 chr19:52978144-52978224 9.62e-04 65_[+3(1.45e-05)]_7 chr17:16525840-16525920 1.01e-03 2_[+3(1.45e-05)]_70 chr9:114304926-114305006 7.22e-08 8_[+5(1.32e-05)]_10_[+4(7.53e-05)]_\ 1_[+4(1.34e-05)]_1_[+2(1.86e-05)]_28 chr17:4996001-4996081 1.74e-04 43_[+5(1.32e-05)]_29 chr5:150275160-150275240 5.44e-05 50_[+2(6.46e-05)]_2_[+3(1.45e-05)]_\ 12 chr18:32833870-32833950 1.54e-05 14_[+2(6.46e-05)]_2_[+3(1.45e-05)]_\ 29_[+1(3.80e-05)]_11 chr7:92569277-92569357 6.66e-02 80 chr12:6753271-6753351 4.09e-02 58_[+1(6.64e-05)]_14 chr4:155875-155955 1.40e-05 46_[+4(1.34e-05)]_26 chr5:178359378-178359458 1.02e-04 64_[+5(1.32e-05)]_8 chr5:140640662-140640742 3.92e-04 58_[+4(1.34e-05)]_14 chr7:6715860-6715940 5.54e-02 80 chr7:18289943-18290023 2.60e-01 80 chr6:27326570-27326650 5.23e-05 14_[+3(9.50e-05)]_29_[+1(6.64e-05)]_\ 21 chr3:44541378-44541458 2.31e-02 60_[+3(2.52e-05)]_12 chr15:25318051-25318131 4.18e-01 80 chr3:75787824-75787904 1.23e-01 80 chr19:58490074-58490154 1.04e-02 [+3(5.91e-05)]_72 chr19:37619569-37619649 4.15e-09 10_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 32_[+1(3.80e-05)]_[+5(1.32e-05)]_5 chrX:47835722-47835802 1.68e-04 26_[+2(6.46e-05)]_2_[+3(2.52e-05)]_\ 36 chr19:53740661-53740741 2.25e-01 80 chr8:145933174-145933254 5.04e-06 2_[+5(1.32e-05)]_[+2(7.83e-05)]_20_\ [+2(1.86e-05)]_34 chr1:247201180-247201260 3.51e-03 48_[+3(5.91e-05)]_24 chr3:44763577-44763657 3.58e-07 19_[+5(1.32e-05)]_19_[+4(1.34e-05)]_\ 26 chr19:52659418-52659498 3.94e-03 6_[+3(5.91e-05)]_29_[+1(3.80e-05)]_\ 29 chr19:12576169-12576249 7.04e-04 36_[+2(1.86e-05)]_1_[+3(6.95e-05)]_\ 27 chr16:31766623-31766703 1.91e-07 6_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 40_[+5(6.92e-05)]_9 chr19:19946656-19946736 3.55e-06 16_[+2(1.86e-05)]_40_[+5(1.32e-05)]_\ 8 chr5:140640065-140640145 7.00e-01 80 chr18:32886663-32886743 6.94e-06 68_[+5(1.32e-05)]_4 chr19:58639557-58639637 4.22e-02 80 chr19:37241108-37241188 1.37e-03 10_[+1(3.80e-05)]_30_[+2(9.23e-05)]_\ 24 chr2:133224209-133224289 4.36e-01 80 chr2:95815325-95815405 3.42e-04 23_[+3(1.45e-05)]_49 chr5:178359592-178359672 1.98e-06 18_[+5(4.96e-05)]_19_[+4(5.73e-05)]_\ 1_[+2(1.86e-05)]_18 chr15:25318321-25318401 3.74e-01 80 chr12:133780236-13378031 1.23e-03 80 chr19:37211417-37211497 1.08e-05 34_[+1(9.43e-05)]_27_[+4(2.35e-05)]_\ 3 chr3:13944389-13944469 8.85e-03 80 chr12:133635226-13363530 9.91e-06 22_[+5(4.96e-05)]_[+2(5.09e-05)]_11_\ [+4(2.35e-05)]_23 chr19:36940085-36940165 9.80e-04 7_[+2(1.86e-05)]_65 chr19:12358571-12358651 9.71e-04 1_[+3(5.91e-05)]_71 chr19:2834375-2834455 3.23e-06 16_[+2(1.86e-05)]_48_[+2(7.83e-05)] chr15:99373385-99373465 4.66e-01 80 chr19:56952721-56952801 9.87e-03 35_[+2(9.23e-05)]_37 chr19:9453516-9453596 1.79e-06 64_[+1(9.43e-05)]_[+5(3.68e-05)] chr12:133635005-13363508 4.78e-05 67_[+1(3.80e-05)]_5 chr19:52090426-52090506 1.32e-03 4_[+4(1.34e-05)]_68 chr19:58724241-58724321 1.34e-04 4_[+4(2.35e-05)]_68 chr17:4995645-4995725 1.23e-06 6_[+4(2.35e-05)]_1_[+2(1.86e-05)]_\ 40_[+5(1.32e-05)]_9 chr19:52376561-52376641 1.90e-06 12_[+2(6.46e-05)]_2_[+3(1.45e-05)]_\ 29_[+1(6.64e-05)]_13 chr19:35434778-35434858 7.73e-06 22_[+5(7.93e-05)]_19_[+4(2.35e-05)]_\ 23 chr19:2834585-2834665 6.12e-04 14_[+1(9.43e-05)]_27_[+4(8.55e-05)]_\ 23 chr1:247320199-247320279 6.27e-05 5_[+3(1.45e-05)]_67 chr2:73941421-73941501 5.27e-02 80 chr3:44763782-44763862 4.53e-07 58_[+1(3.80e-05)]_[+5(3.68e-05)]_6 chr6:27420318-27420398 1.63e-03 [+3(2.52e-05)]_29_[+1(3.80e-05)]_35 chr19:37038221-37038301 1.73e-02 80 chr19:58773816-58773896 1.22e-05 34_[+5(3.68e-05)]_28_[+2(1.86e-05)]_\ 2 chr19:37129946-37130026 4.39e-04 35_[+2(1.86e-05)]_1_[+3(1.45e-05)]_\ 28 chr8:125989141-125989221 2.26e-03 26_[+4(2.35e-05)]_46 chr12:133732868-13373294 3.01e-02 20_[+4(8.55e-05)]_52 chr16:31927462-31927542 4.89e-07 13_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 40_[+5(1.32e-05)]_2 chr3:75787108-75787188 3.83e-02 43_[+3(1.45e-05)]_29 chr19:38055868-38055948 4.66e-03 22_[+3(1.45e-05)]_50 chr5:150330308-150330388 1.27e-03 22_[+1(3.80e-05)]_50 chr19:58708522-58708602 4.94e-02 14_[+1(9.43e-05)]_58 chr5:150275389-150275469 2.58e-01 80 chr19:38160399-38160479 6.50e-04 22_[+2(1.86e-05)]_38_[+1(6.64e-05)]_\ 4 chr19:44351515-44351595 5.57e-06 9_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 36 chr1:40929013-40929093 2.01e-05 2_[+2(1.86e-05)]_70 chr4:367048-367128 2.25e-05 9_[+5(5.95e-05)]_63 chr19:44980802-44980882 9.17e-04 16_[+1(6.64e-05)]_39_[+3(3.94e-05)]_\ 9 chr19:12125963-12126043 6.21e-05 5_[+2(3.70e-05)]_2_[+3(6.95e-05)]_\ 57 chr19:52418528-52418608 4.83e-06 30_[+2(1.86e-05)]_2_[+3(1.45e-05)]_\ 32 chr9:99580283-99580363 5.84e-04 19_[+1(6.64e-05)]_39_[+3(6.95e-05)]_\ 6 chr6:27326769-27326849 5.38e-04 51_[+2(3.70e-05)]_2_[+3(3.94e-05)]_\ 11 chr19:37904585-37904665 1.32e-03 63_[+3(2.52e-05)]_9 chr19:23159196-23159276 3.15e-02 63_[+2(3.70e-05)]_9 chr13:91333791-91333871 8.21e-02 38_[+2(6.46e-05)]_34 chr19:52364975-52365055 1.95e-03 15_[+1(6.64e-05)]_57 chr9:99500774-99500854 4.59e-02 80 chr7:62548077-62548157 7.15e-04 18_[+3(1.45e-05)]_29_[+1(6.64e-05)]_\ 17 chr9:115759747-115759827 7.44e-05 17_[+1(6.64e-05)]_30_[+2(9.23e-05)]_\ 17 chrX:47918689-47918769 9.43e-03 36_[+1(9.43e-05)]_36 chr16:31613318-31613398 5.73e-03 19_[+1(3.80e-05)]_53 chr19:44981408-44981488 2.94e-03 45_[+3(3.94e-05)]_27 chr4:265482-265562 2.25e-04 50_[+2(3.70e-05)]_2_[+3(3.94e-05)]_\ 12 chr16:68598350-68598430 6.67e-08 8_[+4(3.37e-05)]_1_[+2(1.86e-05)]_\ 40_[+5(1.32e-05)]_7 chr6:149560865-149560945 2.25e-03 7_[+1(6.64e-05)]_65 chr10:132080914-13208099 1.53e-03 53_[+1(6.64e-05)]_19 chr19:19822278-19822358 9.39e-05 23_[+2(6.46e-05)]_2_[+3(3.94e-05)]_\ 29_[+1(6.64e-05)]_2 chr11:3380712-3380792 1.95e-03 26_[+3(1.45e-05)]_29_[+1(6.64e-05)]_\ 9 chr19:56935400-56935480 3.54e-04 1_[+5(1.32e-05)]_71 chr7:111111227-111111307 2.01e-01 80 chr9:99521482-99521562 1.34e-04 17_[+1(6.64e-05)]_39_[+3(3.94e-05)]_\ 8 chr7:92498112-92498192 4.72e-01 80 chr1:227842977-227843057 1.06e-06 3_[+5(1.32e-05)]_19_[+4(1.34e-05)]_\ 42 chr10:44112424-44112504 4.42e-04 27_[+5(3.68e-05)]_19_[+4(7.53e-05)]_\ 18 chr19:7083484-7083564 7.11e-06 4_[+5(1.32e-05)]_19_[+4(2.35e-05)]_\ 41 chr5:150275744-150275824 6.15e-06 17_[+1(9.43e-05)]_29_[+2(6.46e-05)]_\ 2_[+3(1.45e-05)]_8 chr1:247264072-247264152 8.33e-04 63_[+3(1.45e-05)]_9 chr9:115805523-115805603 3.52e-05 11_[+1(3.80e-05)]_29_[+2(3.70e-05)]_\ 2_[+3(1.45e-05)]_14 chr3:44776314-44776394 3.26e-06 10_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 53 chr19:54080519-54080599 8.01e-06 6_[+5(3.68e-05)]_19_[+4(3.37e-05)]_\ 39 chr4:155293-155373 7.55e-06 40_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 23 chr1:161019448-161019528 2.73e-01 80 chr19:44981023-44981103 2.02e-04 10_[+3(1.45e-05)]_62 chr19:37368159-37368239 1.43e-04 20_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 43 chr14:50938712-50938792 9.61e-05 [+4(7.53e-05)]_49_[+5(3.68e-05)]_15 chr15:72114085-72114165 1.86e-02 9_[+1(6.64e-05)]_63 chr5:14256292-14256372 1.90e-01 80 chr12:133502355-13350243 4.42e-04 80 chr8:145933383-145933463 7.57e-04 72_[+4(2.35e-05)] chr5:140144041-140144121 2.49e-03 80 chr2:95815532-95815612 6.42e-04 68_[+3(2.52e-05)]_4 chr19:8922236-8922316 2.46e-02 80 chr19:57089387-57089467 5.79e-06 3_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 1_[+2(9.23e-05)]_33 chr4:437376-437456 6.60e-05 21_[+2(3.70e-05)]_2_[+3(1.45e-05)]_\ 41 chr2:65702275-65702355 7.29e-04 36_[+1(6.64e-05)]_36 chr20:45084911-45084991 4.83e-04 59_[+1(6.64e-05)]_13 chr19:52569953-52570033 2.22e-02 80 chr4:368497-368577 8.12e-05 80 chr13:90787910-90787990 1.02e-01 80 chr1:227885226-227885306 6.14e-03 45_[+1(6.64e-05)]_27 chr19:52418801-52418881 3.27e-03 80 chr9:115759951-115760031 1.04e-02 80 chr19:37904877-37904957 7.90e-05 13_[+2(6.46e-05)]_39_[+1(3.80e-05)]_\ 12 chr2:106823800-106823880 1.08e-04 55_[+1(9.43e-05)]_[+5(1.32e-05)]_9 chr19:58639759-58639839 3.11e-05 56_[+2(1.86e-05)]_1_[+3(5.91e-05)]_\ 7 chr13:91654776-91654856 7.99e-02 80 chr19:52365353-52365433 1.48e-05 6_[+5(1.32e-05)]_45_[+1(6.64e-05)]_\ 13 chr19:56935599-56935679 6.49e-02 80 chr5:179686044-179686124 8.27e-03 2_[+4(7.53e-05)]_70 chr19:58490276-58490356 6.57e-04 3_[+1(6.64e-05)]_39_[+3(1.45e-05)]_\ 22 chr19:53116647-53116727 8.87e-03 80 chr19:38294219-38294299 2.38e-06 20_[+5(3.68e-05)]_19_[+4(1.34e-05)]_\ 25 chr1:23688740-23688820 1.51e-03 68_[+1(6.64e-05)]_4 chr22:23025147-23025227 3.12e-01 80 chr19:12638252-12638332 1.12e-05 51_[+2(3.70e-05)]_2_[+3(1.45e-05)]_\ 11 chr7:56754157-56754237 2.93e-04 35_[+3(1.45e-05)]_29_[+1(6.64e-05)] chr6:27420534-27420614 4.96e-03 26_[+2(6.46e-05)]_46 chr20:60685206-60685286 6.93e-02 50_[+1(6.64e-05)]_22 chr7:91910308-91910388 4.77e-02 80 chr13:91589331-91589411 5.41e-02 80 chr7:64438580-64438660 5.63e-05 16_[+3(1.45e-05)]_29_[+1(3.80e-05)]_\ 19 chr12:120420883-12042096 6.43e-03 12_[+1(9.43e-05)]_60 chr1:213470545-213470625 2.06e-02 18_[+1(9.43e-05)]_54 chr19:52869749-52869829 4.46e-06 7_[+4(1.34e-05)]_49_[+5(1.32e-05)]_\ 8 chr7:6731601-6731681 1.72e-02 63_[+3(6.95e-05)]_9 chr12:133780438-13378051 4.14e-06 15_[+4(5.73e-05)]_41_[+1(3.80e-05)]_\ [+5(4.96e-05)] chr1:247353354-247353434 4.73e-05 17_[+1(3.80e-05)]_10_[+2(3.70e-05)]_\ 21_[+3(1.45e-05)]_8 chr3:13943293-13943373 2.31e-03 30_[+5(1.32e-05)]_42 chr19:58724443-58724523 1.32e-01 80 chr19:40519867-40519947 4.00e-08 19_[+1(3.80e-05)]_[+5(3.68e-05)]_19_\ [+4(1.34e-05)]_1_[+2(9.23e-05)]_9 chr19:9639409-9639489 8.26e-04 71_[+1(6.64e-05)]_1 chr13:81102149-81102229 2.38e-01 80 chr22:22769748-22769828 2.73e-02 80 chr22:22517833-22517913 9.38e-03 27_[+1(9.43e-05)]_45 chr19:14829490-14829570 6.21e-08 17_[+2(1.86e-05)]_32_[+1(9.43e-05)]_\ [+5(1.32e-05)]_7 chrX:47307728-47307808 1.17e-03 22_[+3(9.50e-05)]_29_[+1(3.80e-05)]_\ 13 chr22:36208864-36208944 7.68e-03 48_[+1(3.80e-05)]_24 chr1:40961133-40961213 2.21e-08 7_[+4(1.34e-05)]_1_[+2(1.86e-05)]_\ 32_[+1(9.43e-05)]_[+5(3.68e-05)]_8 chr19:19946341-19946421 4.93e-07 43_[+5(1.32e-05)]_19_[+4(1.34e-05)]_\ 2 chr5:140638756-140638836 2.76e-03 80 chr1:246904708-246904788 2.10e-02 80 chr22:22084841-22084921 5.94e-03 80 chr9:99521720-99521800 4.44e-03 31_[+1(3.80e-05)]_41 chr13:91889932-91890012 6.33e-01 80 chr3:44612411-44612491 1.47e-04 21_[+4(2.35e-05)]_51 chr16:31766824-31766904 4.79e-02 80 chr7:57529289-57529369 9.05e-07 [+5(1.32e-05)]_19_[+4(1.34e-05)]_1_\ [+2(1.86e-05)]_36 chr8:18035669-18035749 1.85e-03 22_[+1(9.43e-05)]_50 chr5:140144644-140144724 4.83e-02 80 chr22:23350213-23350293 2.80e-01 80 chr7:105401243-105401323 8.61e-02 80 chr9:130206938-130207018 5.45e-06 49_[+4(2.35e-05)]_1_[+2(9.23e-05)]_\ 14 chr13:90588942-90589022 1.93e-01 80 chr13:91821711-91821791 4.37e-01 80 chr12:133500935-13350101 8.60e-01 80 chr22:23254851-23254931 1.89e-01 80 chr8:125989346-125989426 6.04e-04 21_[+3(9.50e-05)]_51 chr1:145038425-145038505 5.38e-01 80 chr2:27802558-27802638 6.71e-02 80 chr19:35434991-35435071 4.16e-06 4_[+4(5.73e-05)]_49_[+5(7.93e-05)]_\ 11 chr10:42832489-42832569 1.69e-04 41_[+2(3.70e-05)]_2_[+3(1.45e-05)]_\ 21 chr13:90501810-90501890 2.61e-01 80 chr3:75787517-75787597 1.26e-03 54_[+3(1.45e-05)]_18 chr7:146937457-146937537 3.94e-01 80 chr13:90850041-90850121 8.61e-01 80 chr22:22452956-22453036 1.35e-02 15_[+1(6.64e-05)]_57 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************