******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF24.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr16:30101632-30101712 1.0000 80 chr19:55967528-55967608 1.0000 80 chr8:142386051-142386131 1.0000 80 chr10:106100483-10610056 1.0000 80 chr19:3171966-3172046 1.0000 80 chr3:151912357-151912437 1.0000 80 chr8:143836229-143836309 1.0000 80 chr19:47921197-47921277 1.0000 80 chr6:20092344-20092424 1.0000 80 chr5:145422730-145422810 1.0000 80 chr15:80353211-80353291 1.0000 80 chr1:40838545-40838625 1.0000 80 chr6:119448946-119449026 1.0000 80 chr12:50899409-50899489 1.0000 80 chr1:249199185-249199265 1.0000 80 chr4:3491687-3491767 1.0000 80 chr1:23856696-23856776 1.0000 80 chr19:4232758-4232838 1.0000 80 chr7:101191023-101191103 1.0000 80 chr18:826662-826742 1.0000 80 chr17:25650976-25651056 1.0000 80 chr10:5404984-5405064 1.0000 80 chr7:73986709-73986789 1.0000 80 chr18:9931315-9931395 1.0000 80 chr11:65363531-65363611 1.0000 80 chr1:40498100-40498180 1.0000 80 chr1:203279328-203279408 1.0000 80 chr17:35182544-35182624 1.0000 80 chr17:37065940-37066020 1.0000 80 chrX:154251034-154251114 1.0000 80 chr8:144025942-144026022 1.0000 80 chr2:70176373-70176453 1.0000 80 chr14:105043138-10504321 1.0000 80 chr22:40343954-40344034 1.0000 80 chr1:15772359-15772439 1.0000 80 chr7:116562737-116562817 1.0000 80 chrX:119798083-119798163 1.0000 80 chr12:53320739-53320819 1.0000 80 chr6:28910021-28910101 1.0000 80 chr17:48961800-48961880 1.0000 80 chr9:118929141-118929221 1.0000 80 chr3:158491061-158491141 1.0000 80 chr3:194397342-194397422 1.0000 80 chr1:55894656-55894736 1.0000 80 chr11:14170364-14170444 1.0000 80 chr2:118790046-118790126 1.0000 80 chr19:3140711-3140791 1.0000 80 chr17:75603015-75603095 1.0000 80 chr19:3281806-3281886 1.0000 80 chr1:43525475-43525555 1.0000 80 chr16:85476051-85476131 1.0000 80 chr12:114163449-11416352 1.0000 80 chr5:141706939-141707019 1.0000 80 chr16:84266715-84266795 1.0000 80 chr19:1508696-1508776 1.0000 80 chr1:22598487-22598567 1.0000 80 chr4:6942629-6942709 1.0000 80 chr18:9013052-9013132 1.0000 80 chr10:49515777-49515857 1.0000 80 chr19:48394289-48394369 1.0000 80 chr20:62175271-62175351 1.0000 80 chr1:1694191-1694271 1.0000 80 chr17:41162714-41162794 1.0000 80 chr9:136599451-136599531 1.0000 80 chr11:6490139-6490219 1.0000 80 chr9:135717635-135717715 1.0000 80 chr6:159026526-159026606 1.0000 80 chr6:108617028-108617108 1.0000 80 chr19:35872375-35872455 1.0000 80 chr5:180215782-180215862 1.0000 80 chr15:78609842-78609922 1.0000 80 chr18:11741638-11741718 1.0000 80 chr14:23266640-23266720 1.0000 80 chr17:36832217-36832297 1.0000 80 chr16:87972290-87972370 1.0000 80 chr12:125346971-12534705 1.0000 80 chr11:69224912-69224992 1.0000 80 chr14:22024832-22024912 1.0000 80 chr8:98908908-98908988 1.0000 80 chr21:43972679-43972759 1.0000 80 chr9:132435129-132435209 1.0000 80 chr5:173131792-173131872 1.0000 80 chr1:44987490-44987570 1.0000 80 chr16:50280940-50281020 1.0000 80 chr3:72936999-72937079 1.0000 80 chr1:7613244-7613324 1.0000 80 chr4:99752312-99752392 1.0000 80 chr1:229574683-229574763 1.0000 80 chr5:1035309-1035389 1.0000 80 chr9:139475765-139475845 1.0000 80 chr1:16125916-16125996 1.0000 80 chr19:51973043-51973123 1.0000 80 chr3:193789323-193789403 1.0000 80 chr7:75342043-75342123 1.0000 80 chr11:33903337-33903417 1.0000 80 chr16:81498032-81498112 1.0000 80 chr14:101321909-10132198 1.0000 80 chr19:17593835-17593915 1.0000 80 chr1:31375731-31375811 1.0000 80 chr12:116716184-11671626 1.0000 80 chr10:71103802-71103882 1.0000 80 chr1:230204338-230204418 1.0000 80 chr1:175450350-175450430 1.0000 80 chr1:33905388-33905468 1.0000 80 chr8:8374876-8374956 1.0000 80 chr1:23922173-23922253 1.0000 80 chr3:9722830-9722910 1.0000 80 chr6:3056128-3056208 1.0000 80 chr3:141522502-141522582 1.0000 80 chr18:33631876-33631956 1.0000 80 chr3:16090281-16090361 1.0000 80 chr21:40174746-40174826 1.0000 80 chr11:1223157-1223237 1.0000 80 chr10:3102983-3103063 1.0000 80 chr11:117778572-11777865 1.0000 80 chr3:171765651-171765731 1.0000 80 chr1:156414361-156414441 1.0000 80 chr11:33970201-33970281 1.0000 80 chr10:76561382-76561462 1.0000 80 chr4:3608189-3608269 1.0000 80 chr7:696755-696835 1.0000 80 chr6:20533261-20533341 1.0000 80 chr4:190760676-190760756 1.0000 80 chr2:9940609-9940689 1.0000 80 chr1:35324576-35324656 1.0000 80 chr2:171999583-171999663 1.0000 80 chr7:115904468-115904548 1.0000 80 chr1:18929104-18929184 1.0000 80 chr2:121700476-121700556 1.0000 80 chr11:69061276-69061356 1.0000 80 chr16:31366100-31366180 1.0000 80 chr17:75662056-75662136 1.0000 80 chr9:126111120-126111200 1.0000 80 chr7:98722662-98722742 1.0000 80 chr10:134143533-13414361 1.0000 80 chr11:128392556-12839263 1.0000 80 chr1:1899461-1899541 1.0000 80 chr16:23161213-23161293 1.0000 80 chr1:204682218-204682298 1.0000 80 chr17:71265277-71265357 1.0000 80 chr12:96455791-96455871 1.0000 80 chr6:30727825-30727905 1.0000 80 chr4:1170457-1170537 1.0000 80 chr1:172612411-172612491 1.0000 80 chr9:101668723-101668803 1.0000 80 chr10:101425220-10142530 1.0000 80 chr20:31201620-31201700 1.0000 80 chr9:130318672-130318752 1.0000 80 chr1:22267116-22267196 1.0000 80 chr6:134432410-134432490 1.0000 80 chr7:1177089-1177169 1.0000 80 chr17:77888960-77889040 1.0000 80 chr19:13869372-13869452 1.0000 80 chr10:82263124-82263204 1.0000 80 chr19:45924290-45924370 1.0000 80 chr19:47139200-47139280 1.0000 80 chr1:228085551-228085631 1.0000 80 chr7:139707238-139707318 1.0000 80 chr1:19284030-19284110 1.0000 80 chr5:135700163-135700243 1.0000 80 chr17:46933945-46934025 1.0000 80 chr9:139875293-139875373 1.0000 80 chr19:8472452-8472532 1.0000 80 chr17:74329894-74329974 1.0000 80 chr20:48730272-48730352 1.0000 80 chr16:20915313-20915393 1.0000 80 chr22:40375615-40375695 1.0000 80 chrX:1610660-1610740 1.0000 80 chr1:65720767-65720847 1.0000 80 chr17:16933917-16933997 1.0000 80 chr17:75822350-75822430 1.0000 80 chr7:73914022-73914102 1.0000 80 chr1:26718088-26718168 1.0000 80 chr16:84077766-84077846 1.0000 80 chr4:5123970-5124050 1.0000 80 chr5:67616105-67616185 1.0000 80 chr20:43028270-43028350 1.0000 80 chr1:10894145-10894225 1.0000 80 chr2:43174157-43174237 1.0000 80 chr20:31924987-31925067 1.0000 80 chr2:105879219-105879299 1.0000 80 chr4:703162-703242 1.0000 80 chr4:5258961-5259041 1.0000 80 chr5:148933891-148933971 1.0000 80 chr1:155007445-155007525 1.0000 80 chr12:94154430-94154510 1.0000 80 chr19:3226295-3226375 1.0000 80 chr3:197025730-197025810 1.0000 80 chr21:37792550-37792630 1.0000 80 chr9:132191596-132191676 1.0000 80 chr21:45632039-45632119 1.0000 80 chr4:8030251-8030331 1.0000 80 chr1:186300045-186300125 1.0000 80 chr6:41978816-41978896 1.0000 80 chr8:142322473-142322553 1.0000 80 chr19:52035341-52035421 1.0000 80 chr4:7284693-7284773 1.0000 80 chr11:67276779-67276859 1.0000 80 chr17:48359513-48359593 1.0000 80 chr16:23159745-23159825 1.0000 80 chr1:12222938-12223018 1.0000 80 chr17:39734962-39735042 1.0000 80 chr6:17876754-17876834 1.0000 80 chr2:114006856-114006936 1.0000 80 chr19:35747660-35747740 1.0000 80 chr9:131646590-131646670 1.0000 80 chr16:88281232-88281312 1.0000 80 chr1:21148127-21148207 1.0000 80 chr2:209043859-209043939 1.0000 80 chr6:119802427-119802507 1.0000 80 chr5:170918009-170918089 1.0000 80 chr2:9069447-9069527 1.0000 80 chr15:45497612-45497692 1.0000 80 chr7:116823960-116824040 1.0000 80 chr3:14967316-14967396 1.0000 80 chr6:105518706-105518786 1.0000 80 chr11:63828129-63828209 1.0000 80 chr10:3104835-3104915 1.0000 80 chr10:13481506-13481586 1.0000 80 chr5:172192024-172192104 1.0000 80 chr9:68453639-68453719 1.0000 80 chr1:108642898-108642978 1.0000 80 chr19:3501033-3501113 1.0000 80 chr1:15759475-15759555 1.0000 80 chr3:52057157-52057237 1.0000 80 chr8:125452846-125452926 1.0000 80 chr4:8524462-8524542 1.0000 80 chr7:583515-583595 1.0000 80 chr19:8154048-8154128 1.0000 80 chr17:39710435-39710515 1.0000 80 chr20:33275835-33275915 1.0000 80 chr6:10414677-10414757 1.0000 80 chr1:114985981-114986061 1.0000 80 chr8:100301266-100301346 1.0000 80 chr1:29111657-29111737 1.0000 80 chr7:65540386-65540466 1.0000 80 chr17:78954644-78954724 1.0000 80 chr1:44313719-44313799 1.0000 80 chr6:31543979-31544059 1.0000 80 chr15:66904169-66904249 1.0000 80 chr1:47082880-47082960 1.0000 80 chr1:246299985-246300065 1.0000 80 chr22:50336346-50336426 1.0000 80 chr15:101995100-10199518 1.0000 80 chr12:108504784-10850486 1.0000 80 chr9:132019770-132019850 1.0000 80 chr9:139042642-139042722 1.0000 80 chr16:88957050-88957130 1.0000 80 chr5:43234263-43234343 1.0000 80 chr9:95838568-95838648 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF24/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF24.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.294 C 0.204 G 0.217 T 0.285 Background letter frequencies (from file dataset with add-one prior applied): A 0.294 C 0.204 G 0.217 T 0.285 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TSAWTSAW MEME-1 width = 8 sites = 190 llr = 1385 E-value = 1.0e-162 ******************************************************************************** -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a6::a6 pos.-specific C :4:::4:: probability G :6:::6:: matrix T a::4a::3 bits 2.3 2.1 1.8 * * * * 1.6 * * * * Relative 1.4 *** * * Entropy 1.1 *** * * (10.5 bits) 0.9 *** *** 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGAATGAA consensus C T C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:132019770-132019850 51 2.86e-05 aatgagtgaa tgaatgaa GGAGTGCATT chr15:101995100-10199518 68 2.86e-05 aatgaatgaa tgaatgaa tgaat chr1:246299985-246300065 3 2.86e-05 aa tgaatgaa ccaacatagg chr1:47082880-47082960 61 2.86e-05 acttgatgaa tgaatgaa tGGGTGAGTG chr7:65540386-65540466 23 2.86e-05 GTtgaatgaa tgaatgaa tgagtgaatg chr1:29111657-29111737 51 2.86e-05 AAAGAACGAA TGAATGAA AGAATACAAG chr8:100301266-100301346 20 2.86e-05 aatgaatgaa tgaatgaa agaaggaagg chr1:114985981-114986061 49 2.86e-05 aatgaatgaa tgaatgaa tgaatgagat chr6:10414677-10414757 24 2.86e-05 GAAgaaagaa tgaatgaa tgaatgaatg chr20:33275835-33275915 2 2.86e-05 a tgaatgaa tgaatgtgca chr17:39710435-39710515 5 2.86e-05 tgaa tgaatgaa tgaCTTGAAG chr19:8154048-8154128 50 2.86e-05 aattggtaag tgaatgaa taagggagta chr7:583515-583595 32 2.86e-05 aatgaactaa tgaatgaa gaaatgaacg chr1:15759475-15759555 46 2.86e-05 aatgaatgag tgaatgaa taagtgagtg chr5:172192024-172192104 5 2.86e-05 tgag tgaatgaa tgCGTGGGCC chr10:13481506-13481586 20 2.86e-05 agtgaatgaa tgaatgaa tgGAGTAACT chr5:170918009-170918089 24 2.86e-05 aatgaatgaa tgaatgaa tgaataaaAA chr2:209043859-209043939 28 2.86e-05 aatgagtgag tgaatgaa tgaaGTGAGT chr17:39734962-39735042 4 2.86e-05 gaa tgaatgaa tgCCCCTCCC chr16:23159745-23159825 52 2.86e-05 aatgaatgaa tgaatgaa tCTCCTTAAA chr17:48359513-48359593 52 2.86e-05 aatgaatgaa tgaatgaa GAGATCTGCC chr6:41978816-41978896 5 2.86e-05 tgaa tgaatgaa tgaatgaatg chr21:45632039-45632119 28 2.86e-05 gaatgTGGGC TGAATGAA CGAGTGACTG chr5:148933891-148933971 16 2.86e-05 aatgaatgaa tgaatgaa tgaatgaTAG chr4:5258961-5259041 62 2.86e-05 aatgagtgag tgaatgaa tgaatgagta chr4:703162-703242 58 2.86e-05 catgaacaaa tgaatgaa aggcaagagt chr1:26718088-26718168 3 2.86e-05 aa tgaatgaa tGAACAACGG chr7:73914022-73914102 49 2.86e-05 CACCAAGGGA TGAATGAA TGCATACACC chr17:16933917-16933997 47 2.86e-05 catgcatgag tgaatgaa tgaCTCCTGG chrX:1610660-1610740 33 2.86e-05 agtaaatgaa tgaatgaa tgaatgaatg chr22:40375615-40375695 4 2.86e-05 gaa tgaatgaa tgaatgaatg chr19:8472452-8472532 47 2.86e-05 aatgaatgaa tgaatgaa tgaatgGAGA chr1:228085551-228085631 40 2.86e-05 actgattgga tgaatgaa caaaggaatc chr19:45924290-45924370 20 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr10:82263124-82263204 23 2.86e-05 gaatatttgt tgaatgaa tgagtgagga chr19:13869372-13869452 70 2.86e-05 agggaatgaa tgaatgaa CAA chr7:1177089-1177169 8 2.86e-05 ttaaaaa tgaatgaa tGAATGACGG chr20:31201620-31201700 32 2.86e-05 aatgaatgag tgaatgaa tgaataaata chr1:172612411-172612491 7 2.86e-05 aatgaa tgaatgaa tgaatgaatg chr1:1899461-1899541 39 2.86e-05 agtgagtgag tgaatgaa tgagtgaatg chr16:31366100-31366180 2 2.86e-05 a tgaatgaa caaatACTCG chr11:69061276-69061356 4 2.86e-05 gaa tgaatgaa tgGCACCCTA chr1:18929104-18929184 54 2.86e-05 agtgaatgaa tgaatgaa tgcatgagtg chr2:171999583-171999663 35 2.86e-05 aaggaatgaa tgaatgaa tgcacgaatg chr2:9940609-9940689 56 2.86e-05 aatgaatgag tgaatgaa tgGGAGAAAT chr7:696755-696835 20 2.86e-05 gatggatgaa tgaatgaa tgaatgagtg chr4:3608189-3608269 11 2.86e-05 agtgaatggg tgaatgaa caaatgagcg chr10:76561382-76561462 9 2.86e-05 aaaaggaa tgaatgaa atcacatcat chr11:117778572-11777865 49 2.86e-05 agtgaatgaa tgaatgaa tgaatgaaGT chr21:40174746-40174826 27 2.86e-05 gtttgctaag tgaatgaa tGATGCACTT chr3:16090281-16090361 20 2.86e-05 gctgtttgca tgaatgaa tgaTTGACGA chr3:9722830-9722910 42 2.86e-05 aatgagtgaa tgaatgaa tgaTAGGAGC chr8:8374876-8374956 3 2.86e-05 aa tgaatgaa tgaatgagtg chr1:175450350-175450430 37 2.86e-05 aacaaatgaa tgaatgaa tgTGAATTAT chr19:17593835-17593915 47 2.86e-05 aaggagggaa tgaatgaa tgagggaagg chr3:193789323-193789403 34 2.86e-05 aatgaattac tgaatgaa tgaacgaatg chr1:229574683-229574763 34 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr1:7613244-7613324 68 2.86e-05 aatgagggaa tgaatgaa tgagt chr3:72936999-72937079 57 2.86e-05 aacgaacgaa tgaatgaa tgaaGTGGTT chr16:50280940-50281020 41 2.86e-05 aatgaatgaa tgaatgaa tgcatgaCCA chr1:44987490-44987570 47 2.86e-05 tgatgtctAC tgaatgaa tgagtgaatg chr21:43972679-43972759 7 2.86e-05 aatgag tgaatGAA TGATTGGTCA chr11:69224912-69224992 49 2.86e-05 aatgaatgaa tgaatgaa tgaGCAAACC chr17:36832217-36832297 54 2.86e-05 tatgtgtgaa tgaatgaa tGAGCAAGTG chr18:11741638-11741718 3 2.86e-05 Ga tgaatgaa tgaatgaatg chr15:78609842-78609922 62 2.86e-05 GGGAGCTCAG tgaatgaa tgaatgaatg chr1:1694191-1694271 22 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr20:62175271-62175351 50 2.86e-05 gatgaatgga tgaatgaa tgaatgagtg chr19:48394289-48394369 4 2.86e-05 gaa tgaatgaa tgaatgaatg chr18:9013052-9013132 13 2.86e-05 aatgaaggaa tgaatgaa tgagtgaaAA chr4:6942629-6942709 6 2.86e-05 TGGCa tgaatgaa cgaatgaatg chr16:85476051-85476131 2 2.86e-05 a tgaatgaa tgaatgaatg chr19:3140711-3140791 50 2.86e-05 aatgaatgaa tgaatgaa tCATTTTTGG chr2:118790046-118790126 37 2.86e-05 gatgggtgaa tgaatgaa tgaaggatgC chr1:55894656-55894736 9 2.86e-05 gtaaatAC tgaatgaa tgaatgaatg chr9:118929141-118929221 28 2.86e-05 aatgactgaa tgaatgaa tgGTGGTGCC chr6:28910021-28910101 22 2.86e-05 aatgaatgaa tgaatgaa tgaatACTCA chr12:53320739-53320819 2 2.86e-05 a tgaatgaa tgaatgaatg chrX:119798083-119798163 24 2.86e-05 CTtgaatgaa tgaatgaa taaatgaTAT chr7:116562737-116562817 49 2.86e-05 aacgaatgaa tgaatgaa tAGTATAGAT chr2:70176373-70176453 37 2.86e-05 aatgaatgaa tgaatgaa tgaacgaatg chr17:35182544-35182624 62 2.86e-05 aatgaatgag tgaatgaa tTTACACCTG chr18:9931315-9931395 23 2.86e-05 atgaatggat tgaatgaa tgaaCAAACA chr10:5404984-5405064 59 2.86e-05 aactaatgaa tgaatgaa tgaagtaatg chr18:826662-826742 5 2.86e-05 ttgt tgaatgaa tgaatgaatg chr19:4232758-4232838 62 2.86e-05 aacggatgaa tgaatgaa tgaatggatg chr1:23856696-23856776 13 2.86e-05 AATGAAGTAA TGAATGAA TGGCGGCAAC chr1:249199185-249199265 21 2.86e-05 aacacttgaa tgaatgaa tGAGACACAG chr1:40838545-40838625 25 2.86e-05 aatgaatgag tgaatgaa AACACAAGCC chr6:20092344-20092424 29 2.86e-05 aatgaacaaa tgaatgaa tgaacaaatg chr19:47921197-47921277 67 2.86e-05 GGCACAtgga tgaatgaa tgaatg chr11:14170364-14170444 21 5.54e-05 GCTGGACTTT TCAATGAA TACTTGCCAT chr2:105879219-105879299 11 1.38e-04 GACTGCAGGC TGAATGAT AGCTATTTGT chr16:20915313-20915393 1 1.38e-04 . tgaatgaT CTTTAGCATT chr9:135717635-135717715 56 2.94e-04 CAAATGGcat tgattgat tcattattga chr4:8030251-8030331 55 3.18e-04 gctcactcac tcattcaa tcactcattc chr12:94154430-94154510 50 3.18e-04 attcattcat tcattcaA CAAGCACCCA chr20:48730272-48730352 70 3.18e-04 gttcattcat tcattcaA CCA chr9:139875293-139875373 57 3.18e-04 attcattcat tcattcaA CACACATCCA chr6:134432410-134432490 63 3.18e-04 aTTCATTCAT TCATTCAa gacagtcttg chr10:101425220-10142530 71 3.18e-04 attcattcat tcattcaA CA chr6:20533261-20533341 70 3.18e-04 attcattcat tcattcaA CAT chr7:75342043-75342123 9 3.18e-04 ttactcac tcattcaa tccctcattc chr14:22024832-22024912 45 3.18e-04 attcattcat tcattcaA CCAATATTTT chr17:41162714-41162794 60 3.18e-04 CTTCatttct tcattcaa cacagtttta chr11:65363531-65363611 61 3.18e-04 attcattcat tcattcaA GTGCTTaggg chr6:119448946-119449026 69 3.18e-04 attcattcat tcattcaa caaa chr1:10894145-10894225 26 3.68e-04 attcactcat tcaatcat ttgttcactc chr5:135700163-135700243 65 3.68e-04 CCAGACAGGG TCAATCAT TATTGCCT chr4:1170457-1170537 7 3.68e-04 attcat tcaatcat ccattcacac chr16:87972290-87972370 56 3.68e-04 tctcactcag tcaatcat tcattcactc chr5:141706939-141707019 71 3.68e-04 attcactcat tcattGat cg chr9:95838568-95838648 45 4.17e-04 attcattcat tcattcat tcatGTACAG chr16:88957050-88957130 70 4.17e-04 cttcattcat tcattcat tca chr12:108504784-10850486 52 4.17e-04 actccttcac tcattcat tcactcactc chr15:66904169-66904249 49 4.17e-04 attcattcat tcattcat tcattcattT chr8:125452846-125452926 46 4.17e-04 attcattcat tcattcat ttgttcattt chr3:52057157-52057237 49 4.17e-04 attcattcat tcattcat tcattcatgc chr19:3501033-3501113 30 4.17e-04 AGTCGTTCAT TCATTCAT GTATGTAATA chr11:63828129-63828209 43 4.17e-04 attcattcat tcattcat tcatCAACTT chr6:105518706-105518786 56 4.17e-04 attcattcat tcattcat tTgacggagt chr2:9069447-9069527 42 4.17e-04 attcattcat tcattcat ttgagaaagg chr6:119802427-119802507 48 4.17e-04 attcatttgc tcattcat tcactcattc chr11:67276779-67276859 70 4.17e-04 attcattcat tcattcat tca chr4:7284693-7284773 21 4.17e-04 attcattcat tcattcat ccattaattc chr19:52035341-52035421 55 4.17e-04 TGATAGCcac tcattcat tcactcattc chr2:43174157-43174237 66 4.17e-04 TAAAAGTCAT TCattcat tcattcc chr4:5123970-5124050 23 4.17e-04 actcattcat tcattcat tcactcaccc chr17:74329894-74329974 53 4.17e-04 attcattcat tcattcat tctttctttc chr17:46933945-46934025 64 4.17e-04 GTGcattcat tcattcat tcattcatt chr1:19284030-19284110 68 4.17e-04 GAGGACCcat tcattcat tcatt chr7:139707238-139707318 45 4.17e-04 GCCTGttcgt tcattcat tcattcattc chr17:77888960-77889040 68 4.17e-04 attcactaat tcattcat tcatt chr1:22267116-22267196 51 4.17e-04 GTCCATTCAT TCATTCAT Tcagggctgc chr9:130318672-130318752 71 4.17e-04 TGGcattcat tcattcat tc chr9:101668723-101668803 25 4.17e-04 attcattcat tcattcat tcattcattt chr7:98722662-98722742 24 4.17e-04 AAATTttcat tcattcat tcattcattc chr17:75662056-75662136 64 4.17e-04 attcactcac tcattcat tcattcaca chr2:121700476-121700556 52 4.17e-04 actcactcat tcattcat tcgttcacgc chr7:115904468-115904548 71 4.17e-04 CTCCATTGCt tcattcat tc chr11:33970201-33970281 38 4.17e-04 attcattcat tcattcat tcattcattt chr10:3102983-3103063 22 4.17e-04 actcaatcac tcattcat tcactttcac chr6:3056128-3056208 29 4.17e-04 ATTTATTGGT TCATTCAT TCGTTCATTT chr10:71103802-71103882 33 4.17e-04 atttgctcat tcattcat tcaCCATTCC chr12:116716184-11671626 64 4.17e-04 attcattcat tcattcat tcattACat chr1:31375731-31375811 64 4.17e-04 cctcattcat tcattcat tcCTTTGaa chr16:81498032-81498112 69 4.17e-04 AGTGAAGGTC tcattcat tcat chr19:51973043-51973123 63 4.17e-04 AGCcattcac tcattcat acattcattc chr1:16125916-16125996 64 4.17e-04 attcatttgt tcattcat tcactcact chr9:139475765-139475845 18 4.17e-04 actcattccc tcattcat tcactcactc chr4:99752312-99752392 47 4.17e-04 attcattcat tcattcat ttttagatac chr9:132435129-132435209 50 4.17e-04 attcattcat tcattcat tcattcattc chr12:125346971-12534705 60 4.17e-04 attcattcac tcattcat tcGCTCTGTG chr9:136599451-136599531 68 4.17e-04 attcattcac tcattcat tcact chr1:43525475-43525555 42 4.17e-04 CACcactcat tcattcat tcattcgttt chr17:75603015-75603095 46 4.17e-04 attcattcat tcattcat tcattcattc chr3:194397342-194397422 57 4.17e-04 attcattcac tcattcat tcattcattc chr1:15772359-15772439 58 4.17e-04 attcagtcac tcattcat gtatttattc chr17:37065940-37066020 46 4.17e-04 ttcatctcat tcattcat tcattcattc chr1:203279328-203279408 54 4.17e-04 tttcattcat tcattcat tcagtcagtt chr7:101191023-101191103 61 4.17e-04 atttgtccat tcattcat tcgttcattc chr4:3491687-3491767 60 4.17e-04 ctcctcctgc tcattcat tccttccttc chr5:145422730-145422810 61 4.17e-04 GTCTCTCCAG TCATTCAT TCGTTCATTT chr7:116823960-116824040 20 4.37e-04 tgaaaaagaa tgaatgac tgacacgtgc chr16:88281232-88281312 48 4.37e-04 gagtgaatcg tgaatgac tgaatgagtg chr12:96455791-96455871 5 4.37e-04 tgag tgaatgaC TGGGTTAAGC chr1:35324576-35324656 2 4.37e-04 a tgaatGAC AGCCCAAACT chr9:139042642-139042722 65 4.58e-04 aatgagtgag tgaatgag tgagtgaa chr22:50336346-50336426 51 4.58e-04 agtgattgag tgaatgag tgaatgagtg chr17:78954644-78954724 36 4.58e-04 agtgagagaa tgaatgag taaatgagtg chr11:1223157-1223237 60 4.58e-04 agagaatgag tgaatgag tgaataagtg chr5:1035309-1035389 69 4.58e-04 agtgagttaa tgaatgag tgaa chr5:173131792-173131872 5 4.58e-04 tgag tgaatgaG AAGTGAAGTA chr18:33631876-33631956 16 5.34e-04 gattaactaa tgactgaa aactccaaaa chr20:43028270-43028350 8 7.96e-04 cattcac tcattcac tcactcatta chr17:71265277-71265357 65 7.96e-04 attcactcac tcattcac ccattcac chr14:23266640-23266720 72 7.96e-04 tctccagcct tcactcaa a chr1:22598487-22598567 61 7.96e-04 actaatttct tcattcac taccattcat chr10:3104835-3104915 28 8.50e-04 actcatttat tgactcat tcactcattc chr6:31543979-31544059 64 8.89e-04 ACAAGTGATA TGAATAAA GATGGTGAG chr1:108642898-108642978 3 9.44e-04 ac tgaattaa tgcaggaaca chr11:33903337-33903417 10 9.44e-04 atgaacaaa tgaattaa tgaaACCCAC chr3:14967316-14967396 65 1.22e-03 CTGGGTCCAT TCATTAAA TCCTGTTT chr10:134143533-13414361 25 1.25e-03 CCACAGCCAC TCAATAAT CAGATCAACA chr3:197025730-197025810 28 1.34e-03 TAAGCCTAAC TGATTAAT TCCGAGTATG chr6:17876754-17876834 48 1.39e-03 ggctcctatc tcaattat tttatttttc chr9:126111120-126111200 48 1.46e-03 GACCCTGGGC TGACTGAG CCCTGATCCT chr1:65720767-65720847 57 1.53e-03 TCACAGCCAA TCACTGAC TCACTCCatt chr1:40498100-40498180 52 1.54e-03 CATCTTGTGG TGACTCAC TGGCACATTG chr1:204682218-204682298 64 2.26e-03 TGTCATCAAA TGAGTGAG TTGCAAATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:132019770-132019850 2.9e-05 50_[+1]_22 chr15:101995100-10199518 2.9e-05 67_[+1]_5 chr1:246299985-246300065 2.9e-05 2_[+1]_70 chr1:47082880-47082960 2.9e-05 60_[+1]_12 chr7:65540386-65540466 2.9e-05 22_[+1]_50 chr1:29111657-29111737 2.9e-05 50_[+1]_22 chr8:100301266-100301346 2.9e-05 19_[+1]_53 chr1:114985981-114986061 2.9e-05 48_[+1]_24 chr6:10414677-10414757 2.9e-05 23_[+1]_49 chr20:33275835-33275915 2.9e-05 1_[+1]_71 chr17:39710435-39710515 2.9e-05 4_[+1]_68 chr19:8154048-8154128 2.9e-05 49_[+1]_23 chr7:583515-583595 2.9e-05 31_[+1]_41 chr1:15759475-15759555 2.9e-05 45_[+1]_27 chr5:172192024-172192104 2.9e-05 4_[+1]_68 chr10:13481506-13481586 2.9e-05 19_[+1]_53 chr5:170918009-170918089 2.9e-05 23_[+1]_49 chr2:209043859-209043939 2.9e-05 27_[+1]_45 chr17:39734962-39735042 2.9e-05 3_[+1]_69 chr16:23159745-23159825 2.9e-05 51_[+1]_21 chr17:48359513-48359593 2.9e-05 51_[+1]_21 chr6:41978816-41978896 2.9e-05 4_[+1]_68 chr21:45632039-45632119 2.9e-05 27_[+1]_45 chr5:148933891-148933971 2.9e-05 15_[+1]_57 chr4:5258961-5259041 2.9e-05 61_[+1]_11 chr4:703162-703242 2.9e-05 57_[+1]_15 chr1:26718088-26718168 2.9e-05 2_[+1]_70 chr7:73914022-73914102 2.9e-05 48_[+1]_24 chr17:16933917-16933997 2.9e-05 46_[+1]_26 chrX:1610660-1610740 2.9e-05 32_[+1]_40 chr22:40375615-40375695 2.9e-05 3_[+1]_69 chr19:8472452-8472532 2.9e-05 46_[+1]_26 chr1:228085551-228085631 2.9e-05 39_[+1]_33 chr19:45924290-45924370 2.9e-05 19_[+1]_53 chr10:82263124-82263204 2.9e-05 22_[+1]_50 chr19:13869372-13869452 2.9e-05 69_[+1]_3 chr7:1177089-1177169 2.9e-05 7_[+1]_65 chr20:31201620-31201700 2.9e-05 31_[+1]_41 chr1:172612411-172612491 2.9e-05 6_[+1]_66 chr1:1899461-1899541 2.9e-05 38_[+1]_34 chr16:31366100-31366180 2.9e-05 1_[+1]_71 chr11:69061276-69061356 2.9e-05 3_[+1]_69 chr1:18929104-18929184 2.9e-05 53_[+1]_19 chr2:171999583-171999663 2.9e-05 34_[+1]_38 chr2:9940609-9940689 2.9e-05 55_[+1]_17 chr7:696755-696835 2.9e-05 19_[+1]_53 chr4:3608189-3608269 2.9e-05 10_[+1]_62 chr10:76561382-76561462 2.9e-05 8_[+1]_64 chr11:117778572-11777865 2.9e-05 48_[+1]_24 chr21:40174746-40174826 2.9e-05 26_[+1]_46 chr3:16090281-16090361 2.9e-05 19_[+1]_53 chr3:9722830-9722910 2.9e-05 41_[+1]_31 chr8:8374876-8374956 2.9e-05 2_[+1]_70 chr1:175450350-175450430 2.9e-05 36_[+1]_36 chr19:17593835-17593915 2.9e-05 46_[+1]_26 chr3:193789323-193789403 2.9e-05 33_[+1]_39 chr1:229574683-229574763 2.9e-05 33_[+1]_39 chr1:7613244-7613324 2.9e-05 67_[+1]_5 chr3:72936999-72937079 2.9e-05 56_[+1]_16 chr16:50280940-50281020 2.9e-05 40_[+1]_32 chr1:44987490-44987570 2.9e-05 46_[+1]_26 chr21:43972679-43972759 2.9e-05 6_[+1]_66 chr11:69224912-69224992 2.9e-05 48_[+1]_24 chr17:36832217-36832297 2.9e-05 53_[+1]_19 chr18:11741638-11741718 2.9e-05 2_[+1]_70 chr15:78609842-78609922 2.9e-05 61_[+1]_11 chr1:1694191-1694271 2.9e-05 21_[+1]_51 chr20:62175271-62175351 2.9e-05 49_[+1]_23 chr19:48394289-48394369 2.9e-05 3_[+1]_69 chr18:9013052-9013132 2.9e-05 12_[+1]_60 chr4:6942629-6942709 2.9e-05 5_[+1]_67 chr16:85476051-85476131 2.9e-05 1_[+1]_71 chr19:3140711-3140791 2.9e-05 49_[+1]_23 chr2:118790046-118790126 2.9e-05 36_[+1]_36 chr1:55894656-55894736 2.9e-05 8_[+1]_64 chr9:118929141-118929221 2.9e-05 27_[+1]_45 chr6:28910021-28910101 2.9e-05 21_[+1]_51 chr12:53320739-53320819 2.9e-05 1_[+1]_71 chrX:119798083-119798163 2.9e-05 23_[+1]_49 chr7:116562737-116562817 2.9e-05 48_[+1]_24 chr2:70176373-70176453 2.9e-05 36_[+1]_36 chr17:35182544-35182624 2.9e-05 61_[+1]_11 chr18:9931315-9931395 2.9e-05 22_[+1]_50 chr10:5404984-5405064 2.9e-05 58_[+1]_14 chr18:826662-826742 2.9e-05 4_[+1]_68 chr19:4232758-4232838 2.9e-05 61_[+1]_11 chr1:23856696-23856776 2.9e-05 12_[+1]_60 chr1:249199185-249199265 2.9e-05 20_[+1]_52 chr1:40838545-40838625 2.9e-05 24_[+1]_48 chr6:20092344-20092424 2.9e-05 28_[+1]_44 chr19:47921197-47921277 2.9e-05 66_[+1]_6 chr11:14170364-14170444 5.5e-05 20_[+1]_52 chr2:105879219-105879299 0.00014 10_[+1]_62 chr16:20915313-20915393 0.00014 [+1]_72 chr9:135717635-135717715 0.00029 55_[+1]_17 chr4:8030251-8030331 0.00032 54_[+1]_18 chr12:94154430-94154510 0.00032 49_[+1]_23 chr20:48730272-48730352 0.00032 69_[+1]_3 chr9:139875293-139875373 0.00032 56_[+1]_16 chr6:134432410-134432490 0.00032 62_[+1]_10 chr10:101425220-10142530 0.00032 70_[+1]_2 chr6:20533261-20533341 0.00032 69_[+1]_3 chr7:75342043-75342123 0.00032 8_[+1]_64 chr14:22024832-22024912 0.00032 44_[+1]_28 chr17:41162714-41162794 0.00032 59_[+1]_13 chr11:65363531-65363611 0.00032 60_[+1]_12 chr6:119448946-119449026 0.00032 68_[+1]_4 chr1:10894145-10894225 0.00037 25_[+1]_47 chr5:135700163-135700243 0.00037 64_[+1]_8 chr4:1170457-1170537 0.00037 6_[+1]_66 chr16:87972290-87972370 0.00037 55_[+1]_17 chr5:141706939-141707019 0.00037 70_[+1]_2 chr9:95838568-95838648 0.00042 44_[+1]_28 chr16:88957050-88957130 0.00042 69_[+1]_3 chr12:108504784-10850486 0.00042 51_[+1]_21 chr15:66904169-66904249 0.00042 48_[+1]_24 chr8:125452846-125452926 0.00042 45_[+1]_27 chr3:52057157-52057237 0.00042 48_[+1]_24 chr19:3501033-3501113 0.00042 29_[+1]_43 chr11:63828129-63828209 0.00042 42_[+1]_30 chr6:105518706-105518786 0.00042 55_[+1]_17 chr2:9069447-9069527 0.00042 41_[+1]_31 chr6:119802427-119802507 0.00042 47_[+1]_25 chr11:67276779-67276859 0.00042 69_[+1]_3 chr4:7284693-7284773 0.00042 20_[+1]_52 chr19:52035341-52035421 0.00042 54_[+1]_18 chr2:43174157-43174237 0.00042 65_[+1]_7 chr4:5123970-5124050 0.00042 22_[+1]_50 chr17:74329894-74329974 0.00042 52_[+1]_20 chr17:46933945-46934025 0.00042 63_[+1]_9 chr1:19284030-19284110 0.00042 67_[+1]_5 chr7:139707238-139707318 0.00042 44_[+1]_28 chr17:77888960-77889040 0.00042 67_[+1]_5 chr1:22267116-22267196 0.00042 50_[+1]_22 chr9:130318672-130318752 0.00042 70_[+1]_2 chr9:101668723-101668803 0.00042 24_[+1]_48 chr7:98722662-98722742 0.00042 23_[+1]_49 chr17:75662056-75662136 0.00042 63_[+1]_9 chr2:121700476-121700556 0.00042 51_[+1]_21 chr7:115904468-115904548 0.00042 70_[+1]_2 chr11:33970201-33970281 0.00042 37_[+1]_35 chr10:3102983-3103063 0.00042 21_[+1]_51 chr6:3056128-3056208 0.00042 28_[+1]_44 chr10:71103802-71103882 0.00042 32_[+1]_40 chr12:116716184-11671626 0.00042 63_[+1]_9 chr1:31375731-31375811 0.00042 63_[+1]_9 chr16:81498032-81498112 0.00042 68_[+1]_4 chr19:51973043-51973123 0.00042 62_[+1]_10 chr1:16125916-16125996 0.00042 63_[+1]_9 chr9:139475765-139475845 0.00042 17_[+1]_55 chr4:99752312-99752392 0.00042 46_[+1]_26 chr9:132435129-132435209 0.00042 49_[+1]_23 chr12:125346971-12534705 0.00042 59_[+1]_13 chr9:136599451-136599531 0.00042 67_[+1]_5 chr1:43525475-43525555 0.00042 41_[+1]_31 chr17:75603015-75603095 0.00042 45_[+1]_27 chr3:194397342-194397422 0.00042 56_[+1]_16 chr1:15772359-15772439 0.00042 57_[+1]_15 chr17:37065940-37066020 0.00042 45_[+1]_27 chr1:203279328-203279408 0.00042 53_[+1]_19 chr7:101191023-101191103 0.00042 60_[+1]_12 chr4:3491687-3491767 0.00042 59_[+1]_13 chr5:145422730-145422810 0.00042 60_[+1]_12 chr7:116823960-116824040 0.00044 19_[+1]_53 chr16:88281232-88281312 0.00044 47_[+1]_25 chr12:96455791-96455871 0.00044 4_[+1]_68 chr1:35324576-35324656 0.00044 1_[+1]_71 chr9:139042642-139042722 0.00046 64_[+1]_8 chr22:50336346-50336426 0.00046 50_[+1]_22 chr17:78954644-78954724 0.00046 35_[+1]_37 chr11:1223157-1223237 0.00046 59_[+1]_13 chr5:1035309-1035389 0.00046 68_[+1]_4 chr5:173131792-173131872 0.00046 4_[+1]_68 chr18:33631876-33631956 0.00053 15_[+1]_57 chr20:43028270-43028350 0.0008 7_[+1]_65 chr17:71265277-71265357 0.0008 64_[+1]_8 chr14:23266640-23266720 0.0008 71_[+1]_1 chr1:22598487-22598567 0.0008 60_[+1]_12 chr10:3104835-3104915 0.00085 27_[+1]_45 chr6:31543979-31544059 0.00089 63_[+1]_9 chr1:108642898-108642978 0.00094 2_[+1]_70 chr11:33903337-33903417 0.00094 9_[+1]_63 chr3:14967316-14967396 0.0012 64_[+1]_8 chr10:134143533-13414361 0.0013 24_[+1]_48 chr3:197025730-197025810 0.0013 27_[+1]_45 chr6:17876754-17876834 0.0014 47_[+1]_25 chr9:126111120-126111200 0.0015 47_[+1]_25 chr1:65720767-65720847 0.0015 56_[+1]_16 chr1:40498100-40498180 0.0015 51_[+1]_21 chr1:204682218-204682298 0.0023 63_[+1]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TSAWTSAW width=8 seqs=190 chr9:132019770-132019850 ( 51) TGAATGAA 1 chr15:101995100-10199518 ( 68) TGAATGAA 1 chr1:246299985-246300065 ( 3) TGAATGAA 1 chr1:47082880-47082960 ( 61) TGAATGAA 1 chr7:65540386-65540466 ( 23) TGAATGAA 1 chr1:29111657-29111737 ( 51) TGAATGAA 1 chr8:100301266-100301346 ( 20) TGAATGAA 1 chr1:114985981-114986061 ( 49) TGAATGAA 1 chr6:10414677-10414757 ( 24) TGAATGAA 1 chr20:33275835-33275915 ( 2) TGAATGAA 1 chr17:39710435-39710515 ( 5) TGAATGAA 1 chr19:8154048-8154128 ( 50) TGAATGAA 1 chr7:583515-583595 ( 32) TGAATGAA 1 chr1:15759475-15759555 ( 46) TGAATGAA 1 chr5:172192024-172192104 ( 5) TGAATGAA 1 chr10:13481506-13481586 ( 20) TGAATGAA 1 chr5:170918009-170918089 ( 24) TGAATGAA 1 chr2:209043859-209043939 ( 28) TGAATGAA 1 chr17:39734962-39735042 ( 4) TGAATGAA 1 chr16:23159745-23159825 ( 52) TGAATGAA 1 chr17:48359513-48359593 ( 52) TGAATGAA 1 chr6:41978816-41978896 ( 5) TGAATGAA 1 chr21:45632039-45632119 ( 28) TGAATGAA 1 chr5:148933891-148933971 ( 16) TGAATGAA 1 chr4:5258961-5259041 ( 62) TGAATGAA 1 chr4:703162-703242 ( 58) TGAATGAA 1 chr1:26718088-26718168 ( 3) TGAATGAA 1 chr7:73914022-73914102 ( 49) TGAATGAA 1 chr17:16933917-16933997 ( 47) TGAATGAA 1 chrX:1610660-1610740 ( 33) TGAATGAA 1 chr22:40375615-40375695 ( 4) TGAATGAA 1 chr19:8472452-8472532 ( 47) TGAATGAA 1 chr1:228085551-228085631 ( 40) TGAATGAA 1 chr19:45924290-45924370 ( 20) TGAATGAA 1 chr10:82263124-82263204 ( 23) TGAATGAA 1 chr19:13869372-13869452 ( 70) TGAATGAA 1 chr7:1177089-1177169 ( 8) TGAATGAA 1 chr20:31201620-31201700 ( 32) TGAATGAA 1 chr1:172612411-172612491 ( 7) TGAATGAA 1 chr1:1899461-1899541 ( 39) TGAATGAA 1 chr16:31366100-31366180 ( 2) TGAATGAA 1 chr11:69061276-69061356 ( 4) TGAATGAA 1 chr1:18929104-18929184 ( 54) TGAATGAA 1 chr2:171999583-171999663 ( 35) TGAATGAA 1 chr2:9940609-9940689 ( 56) TGAATGAA 1 chr7:696755-696835 ( 20) TGAATGAA 1 chr4:3608189-3608269 ( 11) TGAATGAA 1 chr10:76561382-76561462 ( 9) TGAATGAA 1 chr11:117778572-11777865 ( 49) TGAATGAA 1 chr21:40174746-40174826 ( 27) TGAATGAA 1 chr3:16090281-16090361 ( 20) TGAATGAA 1 chr3:9722830-9722910 ( 42) TGAATGAA 1 chr8:8374876-8374956 ( 3) TGAATGAA 1 chr1:175450350-175450430 ( 37) TGAATGAA 1 chr19:17593835-17593915 ( 47) TGAATGAA 1 chr3:193789323-193789403 ( 34) TGAATGAA 1 chr1:229574683-229574763 ( 34) TGAATGAA 1 chr1:7613244-7613324 ( 68) TGAATGAA 1 chr3:72936999-72937079 ( 57) TGAATGAA 1 chr16:50280940-50281020 ( 41) TGAATGAA 1 chr1:44987490-44987570 ( 47) TGAATGAA 1 chr21:43972679-43972759 ( 7) TGAATGAA 1 chr11:69224912-69224992 ( 49) TGAATGAA 1 chr17:36832217-36832297 ( 54) TGAATGAA 1 chr18:11741638-11741718 ( 3) TGAATGAA 1 chr15:78609842-78609922 ( 62) TGAATGAA 1 chr1:1694191-1694271 ( 22) TGAATGAA 1 chr20:62175271-62175351 ( 50) TGAATGAA 1 chr19:48394289-48394369 ( 4) TGAATGAA 1 chr18:9013052-9013132 ( 13) TGAATGAA 1 chr4:6942629-6942709 ( 6) TGAATGAA 1 chr16:85476051-85476131 ( 2) TGAATGAA 1 chr19:3140711-3140791 ( 50) TGAATGAA 1 chr2:118790046-118790126 ( 37) TGAATGAA 1 chr1:55894656-55894736 ( 9) TGAATGAA 1 chr9:118929141-118929221 ( 28) TGAATGAA 1 chr6:28910021-28910101 ( 22) TGAATGAA 1 chr12:53320739-53320819 ( 2) TGAATGAA 1 chrX:119798083-119798163 ( 24) TGAATGAA 1 chr7:116562737-116562817 ( 49) TGAATGAA 1 chr2:70176373-70176453 ( 37) TGAATGAA 1 chr17:35182544-35182624 ( 62) TGAATGAA 1 chr18:9931315-9931395 ( 23) TGAATGAA 1 chr10:5404984-5405064 ( 59) TGAATGAA 1 chr18:826662-826742 ( 5) TGAATGAA 1 chr19:4232758-4232838 ( 62) TGAATGAA 1 chr1:23856696-23856776 ( 13) TGAATGAA 1 chr1:249199185-249199265 ( 21) TGAATGAA 1 chr1:40838545-40838625 ( 25) TGAATGAA 1 chr6:20092344-20092424 ( 29) TGAATGAA 1 chr19:47921197-47921277 ( 67) TGAATGAA 1 chr11:14170364-14170444 ( 21) TCAATGAA 1 chr2:105879219-105879299 ( 11) TGAATGAT 1 chr16:20915313-20915393 ( 1) TGAATGAT 1 chr9:135717635-135717715 ( 56) TGATTGAT 1 chr4:8030251-8030331 ( 55) TCATTCAA 1 chr12:94154430-94154510 ( 50) TCATTCAA 1 chr20:48730272-48730352 ( 70) TCATTCAA 1 chr9:139875293-139875373 ( 57) TCATTCAA 1 chr6:134432410-134432490 ( 63) TCATTCAA 1 chr10:101425220-10142530 ( 71) TCATTCAA 1 chr6:20533261-20533341 ( 70) TCATTCAA 1 chr7:75342043-75342123 ( 9) TCATTCAA 1 chr14:22024832-22024912 ( 45) TCATTCAA 1 chr17:41162714-41162794 ( 60) TCATTCAA 1 chr11:65363531-65363611 ( 61) TCATTCAA 1 chr6:119448946-119449026 ( 69) TCATTCAA 1 chr1:10894145-10894225 ( 26) TCAATCAT 1 chr5:135700163-135700243 ( 65) TCAATCAT 1 chr4:1170457-1170537 ( 7) TCAATCAT 1 chr16:87972290-87972370 ( 56) TCAATCAT 1 chr5:141706939-141707019 ( 71) TCATTGAT 1 chr9:95838568-95838648 ( 45) TCATTCAT 1 chr16:88957050-88957130 ( 70) TCATTCAT 1 chr12:108504784-10850486 ( 52) TCATTCAT 1 chr15:66904169-66904249 ( 49) TCATTCAT 1 chr8:125452846-125452926 ( 46) TCATTCAT 1 chr3:52057157-52057237 ( 49) TCATTCAT 1 chr19:3501033-3501113 ( 30) TCATTCAT 1 chr11:63828129-63828209 ( 43) TCATTCAT 1 chr6:105518706-105518786 ( 56) TCATTCAT 1 chr2:9069447-9069527 ( 42) TCATTCAT 1 chr6:119802427-119802507 ( 48) TCATTCAT 1 chr11:67276779-67276859 ( 70) TCATTCAT 1 chr4:7284693-7284773 ( 21) TCATTCAT 1 chr19:52035341-52035421 ( 55) TCATTCAT 1 chr2:43174157-43174237 ( 66) TCATTCAT 1 chr4:5123970-5124050 ( 23) TCATTCAT 1 chr17:74329894-74329974 ( 53) TCATTCAT 1 chr17:46933945-46934025 ( 64) TCATTCAT 1 chr1:19284030-19284110 ( 68) TCATTCAT 1 chr7:139707238-139707318 ( 45) TCATTCAT 1 chr17:77888960-77889040 ( 68) TCATTCAT 1 chr1:22267116-22267196 ( 51) TCATTCAT 1 chr9:130318672-130318752 ( 71) TCATTCAT 1 chr9:101668723-101668803 ( 25) TCATTCAT 1 chr7:98722662-98722742 ( 24) TCATTCAT 1 chr17:75662056-75662136 ( 64) TCATTCAT 1 chr2:121700476-121700556 ( 52) TCATTCAT 1 chr7:115904468-115904548 ( 71) TCATTCAT 1 chr11:33970201-33970281 ( 38) TCATTCAT 1 chr10:3102983-3103063 ( 22) TCATTCAT 1 chr6:3056128-3056208 ( 29) TCATTCAT 1 chr10:71103802-71103882 ( 33) TCATTCAT 1 chr12:116716184-11671626 ( 64) TCATTCAT 1 chr1:31375731-31375811 ( 64) TCATTCAT 1 chr16:81498032-81498112 ( 69) TCATTCAT 1 chr19:51973043-51973123 ( 63) TCATTCAT 1 chr1:16125916-16125996 ( 64) TCATTCAT 1 chr9:139475765-139475845 ( 18) TCATTCAT 1 chr4:99752312-99752392 ( 47) TCATTCAT 1 chr9:132435129-132435209 ( 50) TCATTCAT 1 chr12:125346971-12534705 ( 60) TCATTCAT 1 chr9:136599451-136599531 ( 68) TCATTCAT 1 chr1:43525475-43525555 ( 42) TCATTCAT 1 chr17:75603015-75603095 ( 46) TCATTCAT 1 chr3:194397342-194397422 ( 57) TCATTCAT 1 chr1:15772359-15772439 ( 58) TCATTCAT 1 chr17:37065940-37066020 ( 46) TCATTCAT 1 chr1:203279328-203279408 ( 54) TCATTCAT 1 chr7:101191023-101191103 ( 61) TCATTCAT 1 chr4:3491687-3491767 ( 60) TCATTCAT 1 chr5:145422730-145422810 ( 61) TCATTCAT 1 chr7:116823960-116824040 ( 20) TGAATGAC 1 chr16:88281232-88281312 ( 48) TGAATGAC 1 chr12:96455791-96455871 ( 5) TGAATGAC 1 chr1:35324576-35324656 ( 2) TGAATGAC 1 chr9:139042642-139042722 ( 65) TGAATGAG 1 chr22:50336346-50336426 ( 51) TGAATGAG 1 chr17:78954644-78954724 ( 36) TGAATGAG 1 chr11:1223157-1223237 ( 60) TGAATGAG 1 chr5:1035309-1035389 ( 69) TGAATGAG 1 chr5:173131792-173131872 ( 5) TGAATGAG 1 chr18:33631876-33631956 ( 16) TGACTGAA 1 chr20:43028270-43028350 ( 8) TCATTCAC 1 chr17:71265277-71265357 ( 65) TCATTCAC 1 chr14:23266640-23266720 ( 72) TCACTCAA 1 chr1:22598487-22598567 ( 61) TCATTCAC 1 chr10:3104835-3104915 ( 28) TGACTCAT 1 chr6:31543979-31544059 ( 64) TGAATAAA 1 chr1:108642898-108642978 ( 3) TGAATTAA 1 chr11:33903337-33903417 ( 10) TGAATTAA 1 chr3:14967316-14967396 ( 65) TCATTAAA 1 chr10:134143533-13414361 ( 25) TCAATAAT 1 chr3:197025730-197025810 ( 28) TGATTAAT 1 chr6:17876754-17876834 ( 48) TCAATTAT 1 chr9:126111120-126111200 ( 48) TGACTGAG 1 chr1:65720767-65720847 ( 57) TCACTGAC 1 chr1:40498100-40498180 ( 52) TGACTCAC 1 chr1:204682218-204682298 ( 64) TGAGTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.01107 E= 1.0e-162 -1421 -1421 -1421 181 -1421 99 145 -1421 177 -1421 -1421 -1421 102 -269 -536 37 -1421 -1421 -1421 181 -380 91 142 -417 177 -1421 -1421 -1421 98 -211 -237 22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 190 E= 1.0e-162 0.000000 0.000000 0.000000 1.000000 0.000000 0.405263 0.594737 0.000000 1.000000 0.000000 0.000000 0.000000 0.594737 0.031579 0.005263 0.368421 0.000000 0.000000 0.000000 1.000000 0.021053 0.384211 0.578947 0.015789 1.000000 0.000000 0.000000 0.000000 0.578947 0.047368 0.042105 0.331579 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TSAWTSAW MEME-1 regular expression -------------------------------------------------------------------------------- T[GC]A[AT]T[GC]A[AT] -------------------------------------------------------------------------------- Time 4.77 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAATGAA MEME-2 width = 8 sites = 90 llr = 845 E-value = 2.4e-110 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::a8::a9 pos.-specific C :::::::: probability G :a:2:a:: matrix T a:::a::: bits 2.3 * 2.1 * 1.8 ** *** 1.6 *** *** Relative 1.4 *** **** Entropy 1.1 ******** (13.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGAATGAA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:132019770-132019850 31 2.86e-05 aaCTGTtgaa tgaatgaa tgaatgagtg chr15:101995100-10199518 56 2.86e-05 tctcaaaaaa tgaatgaa tgaatgaatg chr1:246299985-246300065 44 2.86e-05 acaaataaaa tgaatgaa taagtgaatg chr7:65540386-65540466 15 2.86e-05 ACGTGTTTGT tgaatgaa tgaatgaatg chr8:100301266-100301346 4 2.86e-05 gaa tgaatgaa tgaatgaatg chr1:114985981-114986061 29 2.86e-05 catctcaaaa tgaatgaa tgaatgaatg chr6:10414677-10414757 36 2.86e-05 aatgaatgaa tgaatgaa tgaatAGAAA chr20:33275835-33275915 30 2.86e-05 aatgaatgaa tgaatgaa tATCTCTAat chr1:15759475-15759555 62 2.86e-05 aataagtgag tgaatgaa tgTTTTCTGT chr10:13481506-13481586 12 2.86e-05 aatgaatgag tgaatgaa tgaatgaatg chr5:170918009-170918089 4 2.86e-05 gaa tgaatgaa tgaatgaatg chr2:209043859-209043939 12 2.86e-05 aacagatgag tgaatgaa tgagtgagtg chr16:23159745-23159825 44 2.86e-05 agtgaataaa tgaatgaa tgaatgaatC chr17:48359513-48359593 44 2.86e-05 aatgaatgaa tgaatgaa tgaatgaaGA chr6:41978816-41978896 25 2.86e-05 aatgaatgaa tgaatgaa tggatTTTTC chr5:148933891-148933971 8 2.86e-05 caataaa tgaatgaa tgaatgaatg chr4:5258961-5259041 18 2.86e-05 aatgattgag tgaatgaa tgagtgaatg chr4:703162-703242 22 2.86e-05 CATGAACACA TGAATGAA AGGCAAgagt chr7:73914022-73914102 3 2.86e-05 ca tgaatgaa tgCATACACA chr17:16933917-16933997 3 2.86e-05 aa tgaatgaa tgaatgaatg chrX:1610660-1610740 41 2.86e-05 aatgaatgaa tgaatgaa tgccactctg chr22:40375615-40375695 20 2.86e-05 aatgaatgaa tgaatgaa agaaATGTGC chr19:8472452-8472532 39 2.86e-05 tcacaGtgaa tgaatgaa tgaatgaatg chr19:45924290-45924370 28 2.86e-05 aatgaatgaa tgaatgaa tgGGGAGAAC chr10:82263124-82263204 46 2.86e-05 gaggagtgaa tgaatgaa ctgagacttg chr19:13869372-13869452 13 2.86e-05 aatgcactaa tgaatgaa caaatgaatt chr20:31201620-31201700 20 2.86e-05 gatgaattaa tgaatgaa tgagtgaatg chr1:172612411-172612491 15 2.86e-05 aatgaatgaa tgaatgaa tgagtgcatg chr1:1899461-1899541 11 2.86e-05 agtgaatgag tgaatgaa taagtgtatc chr1:18929104-18929184 70 2.86e-05 aatgcatgag tgaatgaa tga chr2:171999583-171999663 19 2.86e-05 aatgaatgac tgaatgaa ggaatgaatg chr2:9940609-9940689 44 2.86e-05 gaatgaagag tgaatgaa tgagtgaatg chr11:117778572-11777865 57 2.86e-05 aatgaatgaa tgaatgaa GTCTTCTTTG chr3:9722830-9722910 22 2.86e-05 TGAGGCTTAC tgaatgaa tgaatgagtg chr8:8374876-8374956 23 2.86e-05 aatgagtgaa tgaatgaa AGAGCAAATT chr19:17593835-17593915 71 2.86e-05 aaggagggaa tgaatgaa tg chr3:193789323-193789403 22 2.86e-05 GTCgaatgca tgaatgaa ttactgaatg chr1:229574683-229574763 22 2.86e-05 tcCAaatgaa tgaatgaa tgaatgaatg chr1:7613244-7613324 52 2.86e-05 aatgagggaa tgaatgaa tgagggaatg chr16:50280940-50281020 33 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr1:44987490-44987570 67 2.86e-05 agtgaatgaa tgaatgaa tgaatg chr11:69224912-69224992 37 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr18:11741638-11741718 15 2.86e-05 aatgaatgaa tgaatgaa CATGCGTTGC chr15:78609842-78609922 70 2.86e-05 AGtgaatgaa tgaatgaa tga chr1:1694191-1694271 34 2.86e-05 aatgaatgaa tgaatgaa taaaAGACGC chr19:48394289-48394369 12 2.86e-05 aatgaatgaa tgaatgaa tgGGACTTAC chr4:6942629-6942709 18 2.86e-05 aatgaacgaa tgaatgaa caaatgaatg chr16:85476051-85476131 14 2.86e-05 aatgaatgaa tgaatgaa tgaaGGGATA chr19:3140711-3140791 38 2.86e-05 GCtgaatgaa tgaatgaa tgaatgaatg chr1:55894656-55894736 21 2.86e-05 aatgaatgaa tgaatgaa tgagagcatc chr6:28910021-28910101 6 2.86e-05 atgag tgaatgaa tgaatgaatg chr12:53320739-53320819 10 2.86e-05 atgaatgaa tgaatgaa tgaTTCAATT chrX:119798083-119798163 16 2.86e-05 GAATAATTCT tgaatgaa tgaatgaata chr7:116562737-116562817 21 2.86e-05 tctgaatgaa tgaatgaa tgaatgaatg chr2:70176373-70176453 29 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr17:35182544-35182624 50 2.86e-05 aatgagtgaa tgaatgaa tgagtgaatg chr18:9931315-9931395 6 2.86e-05 ATATG tgaatgaa tgaatggatt chr10:5404984-5405064 43 2.86e-05 aatgaatgaa tgaatgaa ctaatgaatg chr18:826662-826742 13 2.86e-05 gttgaatgaa tgaatgaa tgaatctcag chr19:4232758-4232838 46 2.86e-05 aattaatgaa tgaatgaa cggatgaatg chr1:40838545-40838625 5 2.86e-05 TCAG tgaatgaa tgaatgaatg chr6:20092344-20092424 17 2.86e-05 ATTCAGAGTG tgaatgaa caaatgaatg chr9:139042642-139042722 73 4.97e-05 agtgaatgag tgagtgaa chr22:50336346-50336426 67 4.97e-05 agtgaatgag tgagtgaa tgagtg chr1:47082880-47082960 73 4.97e-05 aatgaatGGG TGAGTGAA chr19:8154048-8154128 34 4.97e-05 agtgaatgag tgagtgaa ttggtaagtg chr7:583515-583595 4 4.97e-05 gaa tgagtgaa caaatgaagg chr7:116823960-116824040 70 4.97e-05 aacaatgtgc tgagtgaa agg chr16:88281232-88281312 72 4.97e-05 agtgagtgag tgagtgaa t chr21:45632039-45632119 13 4.97e-05 aattaatgag tgagtgaa tgTGGGCTGA chr1:228085551-228085631 60 4.97e-05 aaggaatcaa tgagtgaa caaatgattg chr7:696755-696835 56 4.97e-05 aatggatgca tgagtgaa tgtgtggatg chr1:175450350-175450430 21 4.97e-05 GATTGatgaa tgagtgaa caaatgaatg chr5:1035309-1035389 45 4.97e-05 agttaatgaa tgagtgaa caagtgagtg chr3:72936999-72937079 21 4.97e-05 CATGGGTGTG TGAGTGAA TGGGGAAGTA chr20:62175271-62175351 62 4.97e-05 aatgaatgaa tgagtgaa ttagtgagga chr18:9013052-9013132 21 4.97e-05 aatgaatgaa tgagtgaa AACTAGGGAA chr2:43174157-43174237 33 6.95e-05 TGCTCTGTTA TGAATGAC TTGATGGAAC chr7:1177089-1177169 16 6.95e-05 aatgaatgaa tGAATGAC GGAAGGAAGG chr9:118929141-118929221 16 6.95e-05 aatgaatata tgaatgac tgaatgaatg chr17:78954644-78954724 12 9.06e-05 AAAGAGTGGG tgaatgag tcaatgagtg chr4:3608189-3608269 63 9.06e-05 agtgaacaag tgaatgag tgagcgagtg chr11:1223157-1223237 32 9.06e-05 aatgggtaag tgaatgag cgaatgagtg chr8:142322473-142322553 47 1.59e-04 CTGTGCCTCG TAAATGAA GAGGAAAGAG chr19:47921197-47921277 31 1.59e-04 ACCAGGCACA AGAATGAA TGCATGATTG chr9:68453639-68453719 64 2.39e-04 aagaatgttg taagtgaa agaagccag chr5:67616105-67616185 41 2.39e-04 GGAGCCAGGC TAAGTGAA TAGCTGGGGT chr10:76561382-76561462 63 2.39e-04 gtcattatgt taagtgaa ataggtcagg chr16:81498032-81498112 57 2.39e-04 TGATCAGGGA AGAGTGAA GGTCtcattc chr12:114163449-11416352 29 2.39e-04 TCCCAGTCAC AGAGTGAA CCCTGATCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:132019770-132019850 2.9e-05 30_[+2]_42 chr15:101995100-10199518 2.9e-05 55_[+2]_17 chr1:246299985-246300065 2.9e-05 43_[+2]_29 chr7:65540386-65540466 2.9e-05 14_[+2]_58 chr8:100301266-100301346 2.9e-05 3_[+2]_69 chr1:114985981-114986061 2.9e-05 28_[+2]_44 chr6:10414677-10414757 2.9e-05 35_[+2]_37 chr20:33275835-33275915 2.9e-05 29_[+2]_43 chr1:15759475-15759555 2.9e-05 61_[+2]_11 chr10:13481506-13481586 2.9e-05 11_[+2]_61 chr5:170918009-170918089 2.9e-05 3_[+2]_69 chr2:209043859-209043939 2.9e-05 11_[+2]_61 chr16:23159745-23159825 2.9e-05 43_[+2]_29 chr17:48359513-48359593 2.9e-05 43_[+2]_29 chr6:41978816-41978896 2.9e-05 24_[+2]_48 chr5:148933891-148933971 2.9e-05 7_[+2]_65 chr4:5258961-5259041 2.9e-05 17_[+2]_55 chr4:703162-703242 2.9e-05 21_[+2]_51 chr7:73914022-73914102 2.9e-05 2_[+2]_70 chr17:16933917-16933997 2.9e-05 2_[+2]_70 chrX:1610660-1610740 2.9e-05 40_[+2]_32 chr22:40375615-40375695 2.9e-05 19_[+2]_53 chr19:8472452-8472532 2.9e-05 38_[+2]_34 chr19:45924290-45924370 2.9e-05 27_[+2]_45 chr10:82263124-82263204 2.9e-05 45_[+2]_27 chr19:13869372-13869452 2.9e-05 12_[+2]_60 chr20:31201620-31201700 2.9e-05 19_[+2]_53 chr1:172612411-172612491 2.9e-05 14_[+2]_58 chr1:1899461-1899541 2.9e-05 10_[+2]_62 chr1:18929104-18929184 2.9e-05 69_[+2]_3 chr2:171999583-171999663 2.9e-05 18_[+2]_54 chr2:9940609-9940689 2.9e-05 43_[+2]_29 chr11:117778572-11777865 2.9e-05 56_[+2]_16 chr3:9722830-9722910 2.9e-05 21_[+2]_51 chr8:8374876-8374956 2.9e-05 22_[+2]_50 chr19:17593835-17593915 2.9e-05 70_[+2]_2 chr3:193789323-193789403 2.9e-05 21_[+2]_51 chr1:229574683-229574763 2.9e-05 21_[+2]_51 chr1:7613244-7613324 2.9e-05 51_[+2]_21 chr16:50280940-50281020 2.9e-05 32_[+2]_40 chr1:44987490-44987570 2.9e-05 66_[+2]_6 chr11:69224912-69224992 2.9e-05 36_[+2]_36 chr18:11741638-11741718 2.9e-05 14_[+2]_58 chr15:78609842-78609922 2.9e-05 69_[+2]_3 chr1:1694191-1694271 2.9e-05 33_[+2]_39 chr19:48394289-48394369 2.9e-05 11_[+2]_61 chr4:6942629-6942709 2.9e-05 17_[+2]_55 chr16:85476051-85476131 2.9e-05 13_[+2]_59 chr19:3140711-3140791 2.9e-05 37_[+2]_35 chr1:55894656-55894736 2.9e-05 20_[+2]_52 chr6:28910021-28910101 2.9e-05 5_[+2]_67 chr12:53320739-53320819 2.9e-05 9_[+2]_63 chrX:119798083-119798163 2.9e-05 15_[+2]_57 chr7:116562737-116562817 2.9e-05 20_[+2]_52 chr2:70176373-70176453 2.9e-05 28_[+2]_44 chr17:35182544-35182624 2.9e-05 49_[+2]_23 chr18:9931315-9931395 2.9e-05 5_[+2]_67 chr10:5404984-5405064 2.9e-05 42_[+2]_30 chr18:826662-826742 2.9e-05 12_[+2]_60 chr19:4232758-4232838 2.9e-05 45_[+2]_27 chr1:40838545-40838625 2.9e-05 4_[+2]_68 chr6:20092344-20092424 2.9e-05 16_[+2]_56 chr9:139042642-139042722 5e-05 72_[+2] chr22:50336346-50336426 5e-05 66_[+2]_6 chr1:47082880-47082960 5e-05 72_[+2] chr19:8154048-8154128 5e-05 33_[+2]_39 chr7:583515-583595 5e-05 3_[+2]_69 chr7:116823960-116824040 5e-05 69_[+2]_3 chr16:88281232-88281312 5e-05 71_[+2]_1 chr21:45632039-45632119 5e-05 12_[+2]_60 chr1:228085551-228085631 5e-05 59_[+2]_13 chr7:696755-696835 5e-05 55_[+2]_17 chr1:175450350-175450430 5e-05 20_[+2]_52 chr5:1035309-1035389 5e-05 44_[+2]_28 chr3:72936999-72937079 5e-05 20_[+2]_52 chr20:62175271-62175351 5e-05 61_[+2]_11 chr18:9013052-9013132 5e-05 20_[+2]_52 chr2:43174157-43174237 6.9e-05 32_[+2]_40 chr7:1177089-1177169 6.9e-05 15_[+2]_57 chr9:118929141-118929221 6.9e-05 15_[+2]_57 chr17:78954644-78954724 9.1e-05 11_[+2]_61 chr4:3608189-3608269 9.1e-05 62_[+2]_10 chr11:1223157-1223237 9.1e-05 31_[+2]_41 chr8:142322473-142322553 0.00016 46_[+2]_26 chr19:47921197-47921277 0.00016 30_[+2]_42 chr9:68453639-68453719 0.00024 63_[+2]_9 chr5:67616105-67616185 0.00024 40_[+2]_32 chr10:76561382-76561462 0.00024 62_[+2]_10 chr16:81498032-81498112 0.00024 56_[+2]_16 chr12:114163449-11416352 0.00024 28_[+2]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAATGAA width=8 seqs=90 chr9:132019770-132019850 ( 31) TGAATGAA 1 chr15:101995100-10199518 ( 56) TGAATGAA 1 chr1:246299985-246300065 ( 44) TGAATGAA 1 chr7:65540386-65540466 ( 15) TGAATGAA 1 chr8:100301266-100301346 ( 4) TGAATGAA 1 chr1:114985981-114986061 ( 29) TGAATGAA 1 chr6:10414677-10414757 ( 36) TGAATGAA 1 chr20:33275835-33275915 ( 30) TGAATGAA 1 chr1:15759475-15759555 ( 62) TGAATGAA 1 chr10:13481506-13481586 ( 12) TGAATGAA 1 chr5:170918009-170918089 ( 4) TGAATGAA 1 chr2:209043859-209043939 ( 12) TGAATGAA 1 chr16:23159745-23159825 ( 44) TGAATGAA 1 chr17:48359513-48359593 ( 44) TGAATGAA 1 chr6:41978816-41978896 ( 25) TGAATGAA 1 chr5:148933891-148933971 ( 8) TGAATGAA 1 chr4:5258961-5259041 ( 18) TGAATGAA 1 chr4:703162-703242 ( 22) TGAATGAA 1 chr7:73914022-73914102 ( 3) TGAATGAA 1 chr17:16933917-16933997 ( 3) TGAATGAA 1 chrX:1610660-1610740 ( 41) TGAATGAA 1 chr22:40375615-40375695 ( 20) TGAATGAA 1 chr19:8472452-8472532 ( 39) TGAATGAA 1 chr19:45924290-45924370 ( 28) TGAATGAA 1 chr10:82263124-82263204 ( 46) TGAATGAA 1 chr19:13869372-13869452 ( 13) TGAATGAA 1 chr20:31201620-31201700 ( 20) TGAATGAA 1 chr1:172612411-172612491 ( 15) TGAATGAA 1 chr1:1899461-1899541 ( 11) TGAATGAA 1 chr1:18929104-18929184 ( 70) TGAATGAA 1 chr2:171999583-171999663 ( 19) TGAATGAA 1 chr2:9940609-9940689 ( 44) TGAATGAA 1 chr11:117778572-11777865 ( 57) TGAATGAA 1 chr3:9722830-9722910 ( 22) TGAATGAA 1 chr8:8374876-8374956 ( 23) TGAATGAA 1 chr19:17593835-17593915 ( 71) TGAATGAA 1 chr3:193789323-193789403 ( 22) TGAATGAA 1 chr1:229574683-229574763 ( 22) TGAATGAA 1 chr1:7613244-7613324 ( 52) TGAATGAA 1 chr16:50280940-50281020 ( 33) TGAATGAA 1 chr1:44987490-44987570 ( 67) TGAATGAA 1 chr11:69224912-69224992 ( 37) TGAATGAA 1 chr18:11741638-11741718 ( 15) TGAATGAA 1 chr15:78609842-78609922 ( 70) TGAATGAA 1 chr1:1694191-1694271 ( 34) TGAATGAA 1 chr19:48394289-48394369 ( 12) TGAATGAA 1 chr4:6942629-6942709 ( 18) TGAATGAA 1 chr16:85476051-85476131 ( 14) TGAATGAA 1 chr19:3140711-3140791 ( 38) TGAATGAA 1 chr1:55894656-55894736 ( 21) TGAATGAA 1 chr6:28910021-28910101 ( 6) TGAATGAA 1 chr12:53320739-53320819 ( 10) TGAATGAA 1 chrX:119798083-119798163 ( 16) TGAATGAA 1 chr7:116562737-116562817 ( 21) TGAATGAA 1 chr2:70176373-70176453 ( 29) TGAATGAA 1 chr17:35182544-35182624 ( 50) TGAATGAA 1 chr18:9931315-9931395 ( 6) TGAATGAA 1 chr10:5404984-5405064 ( 43) TGAATGAA 1 chr18:826662-826742 ( 13) TGAATGAA 1 chr19:4232758-4232838 ( 46) TGAATGAA 1 chr1:40838545-40838625 ( 5) TGAATGAA 1 chr6:20092344-20092424 ( 17) TGAATGAA 1 chr9:139042642-139042722 ( 73) TGAGTGAA 1 chr22:50336346-50336426 ( 67) TGAGTGAA 1 chr1:47082880-47082960 ( 73) TGAGTGAA 1 chr19:8154048-8154128 ( 34) TGAGTGAA 1 chr7:583515-583595 ( 4) TGAGTGAA 1 chr7:116823960-116824040 ( 70) TGAGTGAA 1 chr16:88281232-88281312 ( 72) TGAGTGAA 1 chr21:45632039-45632119 ( 13) TGAGTGAA 1 chr1:228085551-228085631 ( 60) TGAGTGAA 1 chr7:696755-696835 ( 56) TGAGTGAA 1 chr1:175450350-175450430 ( 21) TGAGTGAA 1 chr5:1035309-1035389 ( 45) TGAGTGAA 1 chr3:72936999-72937079 ( 21) TGAGTGAA 1 chr20:62175271-62175351 ( 62) TGAGTGAA 1 chr18:9013052-9013132 ( 21) TGAGTGAA 1 chr2:43174157-43174237 ( 33) TGAATGAC 1 chr7:1177089-1177169 ( 16) TGAATGAC 1 chr9:118929141-118929221 ( 16) TGAATGAC 1 chr17:78954644-78954724 ( 12) TGAATGAG 1 chr4:3608189-3608269 ( 63) TGAATGAG 1 chr11:1223157-1223237 ( 32) TGAATGAG 1 chr8:142322473-142322553 ( 47) TAAATGAA 1 chr19:47921197-47921277 ( 31) AGAATGAA 1 chr9:68453639-68453719 ( 64) TAAGTGAA 1 chr5:67616105-67616185 ( 41) TAAGTGAA 1 chr10:76561382-76561462 ( 63) TAAGTGAA 1 chr16:81498032-81498112 ( 57) AGAGTGAA 1 chr12:114163449-11416352 ( 29) AGAGTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.7059 E= 2.4e-110 -314 -1314 -1314 176 -272 -1314 214 -1314 177 -1314 -1314 -1314 140 -1314 3 -1314 -1314 -1314 -1314 181 -1314 -1314 220 -1314 177 -1314 -1314 -1314 167 -261 -270 -1314 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 90 E= 2.4e-110 0.033333 0.000000 0.000000 0.966667 0.044444 0.000000 0.955556 0.000000 1.000000 0.000000 0.000000 0.000000 0.777778 0.000000 0.222222 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.933333 0.033333 0.033333 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAA MEME-2 regular expression -------------------------------------------------------------------------------- TGA[AG]TGAA -------------------------------------------------------------------------------- Time 8.15 secs. ******************************************************************************** ******************************************************************************** MOTIF TCATTCAT MEME-3 width = 8 sites = 75 llr = 714 E-value = 7.7e-087 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:::a: pos.-specific C 1a:::a:1 probability G :::::::: matrix T 9::aa::9 bits 2.3 * * 2.1 * * 1.8 * * 1.6 ****** Relative 1.4 ******** Entropy 1.1 ******** (13.7 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCATTCAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:95838568-95838648 29 2.37e-05 GTTTGttcat tcattcat tcattcattc chr16:88957050-88957130 62 2.37e-05 atcactggct tcattcat tcattcattc chr12:108504784-10850486 28 2.37e-05 AACCAATAac tcattcat tcactcactc chr15:66904169-66904249 57 2.37e-05 attcattcat tcattcat tTCacaggga chr8:125452846-125452926 38 2.37e-05 CTTTTttcat tcattcat tcattcattt chr3:52057157-52057237 57 2.37e-05 attcattcat tcattcat gcatgcatgc chr11:63828129-63828209 35 2.37e-05 attcgttcat tcattcat tcattcattc chr6:105518706-105518786 48 2.37e-05 TTAcattcat tcattcat tcattcattT chr2:9069447-9069527 34 2.37e-05 attcattcat tcattcat tcattcattt chr6:119802427-119802507 64 2.37e-05 attcactcat tcattcat ttcatattt chr11:67276779-67276859 62 2.37e-05 GGACAGtcat tcattcat tcattcattc chr4:7284693-7284773 13 2.37e-05 attcactcat tcattcat tcattcatcc chr19:52035341-52035421 67 2.37e-05 attcattcac tcattcat tcattc chr4:8030251-8030331 3 2.37e-05 ac tcattcat taattcattc chr12:94154430-94154510 38 2.37e-05 attcattcat tcattcat tcattcattc chr1:10894145-10894225 50 2.37e-05 actcattcac tcattcat tcactcattt chr4:5123970-5124050 15 2.37e-05 actcatttac tcattcat tcattcattc chr20:48730272-48730352 50 2.37e-05 attcattcat tcattcat tcgttcattc chr17:74329894-74329974 45 2.37e-05 CTGcattcat tcattcat tcattcattc chr9:139875293-139875373 49 2.37e-05 attcattcat tcattcat tcattcaACA chr17:46933945-46934025 72 2.37e-05 attcattcat tcattcat t chr7:139707238-139707318 69 2.37e-05 attcgttcat tcattcat tcaG chr17:77888960-77889040 48 2.37e-05 attcactcat tcattcat ccattcacta chr6:134432410-134432490 55 2.37e-05 aatcctgcaT TCATTCAT TCATTCAaga chr1:22267116-22267196 16 2.37e-05 TGAGAGCTTA TCATTCAT CTTAATCACA chr10:101425220-10142530 40 2.37e-05 TTCACTTTGG tcattcat tcattcattc chr9:101668723-101668803 33 2.37e-05 attcattcat tcattcat ttgttcattc chr7:98722662-98722742 40 2.37e-05 attcattcat tcattcat tcattcattc chr17:75662056-75662136 22 2.37e-05 actcactcat tcattcat tcgctcttca chr2:121700476-121700556 20 2.37e-05 actcactcat tcattcat tcgttcacac chr6:20533261-20533341 58 2.37e-05 AGtcattcat tcattcat tcattcattc chr11:33970201-33970281 46 2.37e-05 attcattcat tcattcat ttgttcaACA chr12:116716184-11671626 56 2.37e-05 GTGcactcat tcattcat tcattcattc chr1:31375731-31375811 56 2.37e-05 ctttattccc tcattcat tcattcattc chr7:75342043-75342123 69 2.37e-05 attcactcac tcattcat tcac chr1:16125916-16125996 52 2.37e-05 CCCGCttcat tcattcat ttgttcattc chr4:99752312-99752392 27 2.37e-05 attcattcat tcattcat tcattcattc chr9:132435129-132435209 42 2.37e-05 Gttcattcat tcattcat tcattcattc chr14:22024832-22024912 33 2.37e-05 attcattcat tcattcat tcattcattc chr12:125346971-12534705 48 2.37e-05 AGCAGATCCt tcattcat tcactcattc chr16:87972290-87972370 72 2.37e-05 attcattcac tcattcat t chr9:136599451-136599531 52 2.37e-05 attcattcac tcattcat tcattcactc chr17:41162714-41162794 39 2.37e-05 TCCTTTACCG TCATTCAT TCACTTCatt chr5:141706939-141707019 47 2.37e-05 attcattcat tcattcat tcactcattc chr1:43525475-43525555 70 2.37e-05 attcattcat tcattcat tca chr17:75603015-75603095 62 2.37e-05 attcattcat tcattcat atattcactt chr3:194397342-194397422 73 2.37e-05 attcattcat tcattcat chr1:15772359-15772439 30 2.37e-05 attcatgcat tcattcat ttattcactt chr17:37065940-37066020 66 2.37e-05 attcattcat tcattcat tTGtttt chr1:203279328-203279408 46 2.37e-05 Gtcgttcatt tcattcat tcattcattc chr11:65363531-65363611 45 2.37e-05 CATACCAcat tcattcat tcattcattc chr7:101191023-101191103 73 2.37e-05 attcattcgt tcattcat chr4:3491687-3491767 7 2.37e-05 CGCTAC TCATTCAT CCTTCCTTCC chr6:119448946-119449026 57 2.37e-05 atgcattcat tcattcat tcattcattc chr15:45497612-45497692 65 4.07e-05 acttatctat ccattcat ccatccat chr20:31924987-31925067 60 4.07e-05 ggagctGGCC Ccattcat tcgtgcattc chr1:65720767-65720847 70 4.07e-05 CTGACTCACT CCattcat tca chr14:101321909-10132198 60 4.07e-05 TGTAACtcat ccattcat cccttcatcc chr1:22598487-22598567 71 4.07e-05 tcattcacta ccattcat tc chr10:3104835-3104915 56 5.77e-05 gttcattcac tcattcac ttgttcactc chr17:71265277-71265357 53 5.77e-05 actcgttcac tcattcac tcactcattc chr10:3102983-3103063 72 5.77e-05 attcactcac tcattcac t chr9:139475765-139475845 46 5.77e-05 attcactcac tcattcac tcgttcactc chr19:3501033-3501113 22 9.17e-05 AGAAATGCAG TCGTTCAT TCATTCATGT chr3:141522502-141522582 48 9.17e-05 tatcagtact tcattcct ttctTCCCCT chr6:3056128-3056208 37 9.17e-05 GTTCATTCAT TCGTTCAT TTTGCTGTAA chr1:33905388-33905468 1 9.17e-05 . tcattcct gtcctgcctt chr5:145422730-145422810 69 9.17e-05 AGTCATTCAT TCGTTCAT TTTT chr17:25650976-25651056 69 1.09e-04 CCAGCACTGG tcatccat gcac chr4:1170457-1170537 15 1.21e-04 attcaatcat ccattcac acagtacatt chr19:51973043-51973123 55 1.21e-04 TGGGTGGTAG Ccattcac tcattcatac chrX:154251034-154251114 53 1.21e-04 TAAACTTAAC CCATTCAC TTCTGAGAGC chr20:43028270-43028350 40 1.38e-04 acccacccat tcactcat taattcaccc chr8:142322473-142322553 19 1.86e-04 TTGCTGGGCA TCATTCCC TTCCTCTCCT chr10:71103802-71103882 65 1.99e-04 ATCTGCTCTC ccatccat ccatccat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:95838568-95838648 2.4e-05 28_[+3]_44 chr16:88957050-88957130 2.4e-05 61_[+3]_11 chr12:108504784-10850486 2.4e-05 27_[+3]_45 chr15:66904169-66904249 2.4e-05 56_[+3]_16 chr8:125452846-125452926 2.4e-05 37_[+3]_35 chr3:52057157-52057237 2.4e-05 56_[+3]_16 chr11:63828129-63828209 2.4e-05 34_[+3]_38 chr6:105518706-105518786 2.4e-05 47_[+3]_25 chr2:9069447-9069527 2.4e-05 33_[+3]_39 chr6:119802427-119802507 2.4e-05 63_[+3]_9 chr11:67276779-67276859 2.4e-05 61_[+3]_11 chr4:7284693-7284773 2.4e-05 12_[+3]_60 chr19:52035341-52035421 2.4e-05 66_[+3]_6 chr4:8030251-8030331 2.4e-05 2_[+3]_70 chr12:94154430-94154510 2.4e-05 37_[+3]_35 chr1:10894145-10894225 2.4e-05 49_[+3]_23 chr4:5123970-5124050 2.4e-05 14_[+3]_58 chr20:48730272-48730352 2.4e-05 49_[+3]_23 chr17:74329894-74329974 2.4e-05 44_[+3]_28 chr9:139875293-139875373 2.4e-05 48_[+3]_24 chr17:46933945-46934025 2.4e-05 71_[+3]_1 chr7:139707238-139707318 2.4e-05 68_[+3]_4 chr17:77888960-77889040 2.4e-05 47_[+3]_25 chr6:134432410-134432490 2.4e-05 54_[+3]_18 chr1:22267116-22267196 2.4e-05 15_[+3]_57 chr10:101425220-10142530 2.4e-05 39_[+3]_33 chr9:101668723-101668803 2.4e-05 32_[+3]_40 chr7:98722662-98722742 2.4e-05 39_[+3]_33 chr17:75662056-75662136 2.4e-05 21_[+3]_51 chr2:121700476-121700556 2.4e-05 19_[+3]_53 chr6:20533261-20533341 2.4e-05 57_[+3]_15 chr11:33970201-33970281 2.4e-05 45_[+3]_27 chr12:116716184-11671626 2.4e-05 55_[+3]_17 chr1:31375731-31375811 2.4e-05 55_[+3]_17 chr7:75342043-75342123 2.4e-05 68_[+3]_4 chr1:16125916-16125996 2.4e-05 51_[+3]_21 chr4:99752312-99752392 2.4e-05 26_[+3]_46 chr9:132435129-132435209 2.4e-05 41_[+3]_31 chr14:22024832-22024912 2.4e-05 32_[+3]_40 chr12:125346971-12534705 2.4e-05 47_[+3]_25 chr16:87972290-87972370 2.4e-05 71_[+3]_1 chr9:136599451-136599531 2.4e-05 51_[+3]_21 chr17:41162714-41162794 2.4e-05 38_[+3]_34 chr5:141706939-141707019 2.4e-05 46_[+3]_26 chr1:43525475-43525555 2.4e-05 69_[+3]_3 chr17:75603015-75603095 2.4e-05 61_[+3]_11 chr3:194397342-194397422 2.4e-05 72_[+3] chr1:15772359-15772439 2.4e-05 29_[+3]_43 chr17:37065940-37066020 2.4e-05 65_[+3]_7 chr1:203279328-203279408 2.4e-05 45_[+3]_27 chr11:65363531-65363611 2.4e-05 44_[+3]_28 chr7:101191023-101191103 2.4e-05 72_[+3] chr4:3491687-3491767 2.4e-05 6_[+3]_66 chr6:119448946-119449026 2.4e-05 56_[+3]_16 chr15:45497612-45497692 4.1e-05 64_[+3]_8 chr20:31924987-31925067 4.1e-05 59_[+3]_13 chr1:65720767-65720847 4.1e-05 69_[+3]_3 chr14:101321909-10132198 4.1e-05 59_[+3]_13 chr1:22598487-22598567 4.1e-05 70_[+3]_2 chr10:3104835-3104915 5.8e-05 55_[+3]_17 chr17:71265277-71265357 5.8e-05 52_[+3]_20 chr10:3102983-3103063 5.8e-05 71_[+3]_1 chr9:139475765-139475845 5.8e-05 45_[+3]_27 chr19:3501033-3501113 9.2e-05 21_[+3]_51 chr3:141522502-141522582 9.2e-05 47_[+3]_25 chr6:3056128-3056208 9.2e-05 36_[+3]_36 chr1:33905388-33905468 9.2e-05 [+3]_72 chr5:145422730-145422810 9.2e-05 68_[+3]_4 chr17:25650976-25651056 0.00011 68_[+3]_4 chr4:1170457-1170537 0.00012 14_[+3]_58 chr19:51973043-51973123 0.00012 54_[+3]_18 chrX:154251034-154251114 0.00012 52_[+3]_20 chr20:43028270-43028350 0.00014 39_[+3]_33 chr8:142322473-142322553 0.00019 18_[+3]_54 chr10:71103802-71103882 0.0002 64_[+3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCATTCAT width=8 seqs=75 chr9:95838568-95838648 ( 29) TCATTCAT 1 chr16:88957050-88957130 ( 62) TCATTCAT 1 chr12:108504784-10850486 ( 28) TCATTCAT 1 chr15:66904169-66904249 ( 57) TCATTCAT 1 chr8:125452846-125452926 ( 38) TCATTCAT 1 chr3:52057157-52057237 ( 57) TCATTCAT 1 chr11:63828129-63828209 ( 35) TCATTCAT 1 chr6:105518706-105518786 ( 48) TCATTCAT 1 chr2:9069447-9069527 ( 34) TCATTCAT 1 chr6:119802427-119802507 ( 64) TCATTCAT 1 chr11:67276779-67276859 ( 62) TCATTCAT 1 chr4:7284693-7284773 ( 13) TCATTCAT 1 chr19:52035341-52035421 ( 67) TCATTCAT 1 chr4:8030251-8030331 ( 3) TCATTCAT 1 chr12:94154430-94154510 ( 38) TCATTCAT 1 chr1:10894145-10894225 ( 50) TCATTCAT 1 chr4:5123970-5124050 ( 15) TCATTCAT 1 chr20:48730272-48730352 ( 50) TCATTCAT 1 chr17:74329894-74329974 ( 45) TCATTCAT 1 chr9:139875293-139875373 ( 49) TCATTCAT 1 chr17:46933945-46934025 ( 72) TCATTCAT 1 chr7:139707238-139707318 ( 69) TCATTCAT 1 chr17:77888960-77889040 ( 48) TCATTCAT 1 chr6:134432410-134432490 ( 55) TCATTCAT 1 chr1:22267116-22267196 ( 16) TCATTCAT 1 chr10:101425220-10142530 ( 40) TCATTCAT 1 chr9:101668723-101668803 ( 33) TCATTCAT 1 chr7:98722662-98722742 ( 40) TCATTCAT 1 chr17:75662056-75662136 ( 22) TCATTCAT 1 chr2:121700476-121700556 ( 20) TCATTCAT 1 chr6:20533261-20533341 ( 58) TCATTCAT 1 chr11:33970201-33970281 ( 46) TCATTCAT 1 chr12:116716184-11671626 ( 56) TCATTCAT 1 chr1:31375731-31375811 ( 56) TCATTCAT 1 chr7:75342043-75342123 ( 69) TCATTCAT 1 chr1:16125916-16125996 ( 52) TCATTCAT 1 chr4:99752312-99752392 ( 27) TCATTCAT 1 chr9:132435129-132435209 ( 42) TCATTCAT 1 chr14:22024832-22024912 ( 33) TCATTCAT 1 chr12:125346971-12534705 ( 48) TCATTCAT 1 chr16:87972290-87972370 ( 72) TCATTCAT 1 chr9:136599451-136599531 ( 52) TCATTCAT 1 chr17:41162714-41162794 ( 39) TCATTCAT 1 chr5:141706939-141707019 ( 47) TCATTCAT 1 chr1:43525475-43525555 ( 70) TCATTCAT 1 chr17:75603015-75603095 ( 62) TCATTCAT 1 chr3:194397342-194397422 ( 73) TCATTCAT 1 chr1:15772359-15772439 ( 30) TCATTCAT 1 chr17:37065940-37066020 ( 66) TCATTCAT 1 chr1:203279328-203279408 ( 46) TCATTCAT 1 chr11:65363531-65363611 ( 45) TCATTCAT 1 chr7:101191023-101191103 ( 73) TCATTCAT 1 chr4:3491687-3491767 ( 7) TCATTCAT 1 chr6:119448946-119449026 ( 57) TCATTCAT 1 chr15:45497612-45497692 ( 65) CCATTCAT 1 chr20:31924987-31925067 ( 60) CCATTCAT 1 chr1:65720767-65720847 ( 70) CCATTCAT 1 chr14:101321909-10132198 ( 60) CCATTCAT 1 chr1:22598487-22598567 ( 71) CCATTCAT 1 chr10:3104835-3104915 ( 56) TCATTCAC 1 chr17:71265277-71265357 ( 53) TCATTCAC 1 chr10:3102983-3103063 ( 72) TCATTCAC 1 chr9:139475765-139475845 ( 46) TCATTCAC 1 chr19:3501033-3501113 ( 22) TCGTTCAT 1 chr3:141522502-141522582 ( 48) TCATTCCT 1 chr6:3056128-3056208 ( 37) TCGTTCAT 1 chr1:33905388-33905468 ( 1) TCATTCCT 1 chr5:145422730-145422810 ( 69) TCGTTCAT 1 chr17:25650976-25651056 ( 69) TCATCCAT 1 chr4:1170457-1170537 ( 15) CCATTCAC 1 chr19:51973043-51973123 ( 55) CCATTCAC 1 chrX:154251034-154251114 ( 53) CCATTCAC 1 chr20:43028270-43028350 ( 40) TCACTCAT 1 chr8:142322473-142322553 ( 19) TCATTCCC 1 chr10:71103802-71103882 ( 65) CCATCCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1012 E= 7.7e-087 -1287 -77 -1287 163 -1287 229 -1287 -1287 171 -1287 -244 -1287 -1287 -393 -1287 179 -1287 -294 -1287 177 -1287 229 -1287 -1287 171 -235 -1287 -1287 -1287 -94 -1287 165 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 75 E= 7.7e-087 0.000000 0.120000 0.000000 0.880000 0.000000 1.000000 0.000000 0.000000 0.960000 0.000000 0.040000 0.000000 0.000000 0.013333 0.000000 0.986667 0.000000 0.026667 0.000000 0.973333 0.000000 1.000000 0.000000 0.000000 0.960000 0.040000 0.000000 0.000000 0.000000 0.106667 0.000000 0.893333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-3 regular expression -------------------------------------------------------------------------------- TCATTCAT -------------------------------------------------------------------------------- Time 11.40 secs. ******************************************************************************** ******************************************************************************** MOTIF TCATTCAT MEME-4 width = 8 sites = 57 llr = 520 E-value = 1.9e-044 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1:a:::9: pos.-specific C :a:3:a:1 probability G 1::::::: matrix T 9::7a::9 bits 2.3 * * 2.1 * * 1.8 * ** 1.6 ** ** * Relative 1.4 ** **** Entropy 1.1 ******** (13.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCATTCAT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:95838568-95838648 37 2.37e-05 attcattcat tcattcat tcattcattc chr15:66904169-66904249 41 2.37e-05 AGtcattcat tcattcat tcattcattc chr3:52057157-52057237 41 2.37e-05 CCTTattcat tcattcat tcattcattc chr2:9069447-9069527 26 2.37e-05 attcattcat tcattcat tcattcattc chr6:119802427-119802507 32 2.37e-05 atttgctcat tcattcat tcatttgctc chr12:94154430-94154510 30 2.37e-05 TGTTTGCcat tcattcat tcattcattc chr20:48730272-48730352 62 2.37e-05 attcattcgt tcattcat tcattcaACC chr9:139875293-139875373 33 2.37e-05 CTCcattcat tcattcat tcattcattc chr7:139707238-139707318 53 2.37e-05 gttcattcat tcattcat tcgttcattc chr17:77888960-77889040 32 2.37e-05 CCCACttcat tcattcat tcactcattc chr10:101425220-10142530 48 2.37e-05 GGtcattcat tcattcat tcatcattca chr9:101668723-101668803 13 2.37e-05 ATATTGtcat tcattcat tcattcattc chr7:98722662-98722742 48 2.37e-05 attcattcat tcattcat tcgagacagg chr17:75662056-75662136 2 2.37e-05 t tcattcat tcactcactc chr6:20533261-20533341 50 2.37e-05 AGGGGTGGAG tcattcat tcattcattc chr11:33970201-33970281 22 2.37e-05 GCACTTTATC tcattcat tcattcattc chr7:75342043-75342123 53 2.37e-05 tctcatttac tcattcat tcactcactc chr4:99752312-99752392 39 2.37e-05 attcattcat tcattcat tcattcattt chr9:132435129-132435209 66 2.37e-05 attcattcat tcattcat tcTACAG chr14:22024832-22024912 25 2.37e-05 TATTGCtcat tcattcat tcattcattc chr16:87972290-87972370 36 2.37e-05 attcactcac tcattcat tctctcactc chr9:136599451-136599531 24 2.37e-05 actcattcat tcattcat tcactcattc chr5:141706939-141707019 35 2.37e-05 AAAAattcat tcattcat tcattcattc chr1:43525475-43525555 62 2.37e-05 attcgtttat tcattcat tcattcattc chr17:75603015-75603095 54 2.37e-05 attcattcat tcattcat tcattcatat chr3:194397342-194397422 45 2.37e-05 actcatccat tcattcat tcactcattc chr1:15772359-15772439 18 2.37e-05 atttattcac tcattcat gcattcattc chr17:37065940-37066020 58 2.37e-05 attcattcat tcattcat tcattcattT chr11:65363531-65363611 53 2.37e-05 attcattcat tcattcat tcattcaAGT chr7:101191023-101191103 45 2.37e-05 gttcattcat tcattcat ttgtccattc chr6:119448946-119449026 41 2.37e-05 GGtcattcca tcattcat gcattcattc chr12:108504784-10850486 64 4.07e-05 attcattcac tcactcat tagttcatt chr10:3104835-3104915 72 4.07e-05 acttgttcac tcactcat t chr4:7284693-7284773 53 4.07e-05 attcacccat tcactcat ttattcatcc chr4:8030251-8030331 63 4.07e-05 actcattcaa tcactcat tcactcactc chr1:10894145-10894225 38 4.07e-05 aatcatttgt tcactcat tcactcattc chr20:43028270-43028350 16 4.07e-05 actcattcac tcactcat taattcaccc chr17:71265277-71265357 29 4.07e-05 acccattcac tcactcat tcactcactc chr2:121700476-121700556 44 4.07e-05 acaccctcac tcactcat tcattcattc chr10:3102983-3103063 48 4.07e-05 actcagtcat tcactcat taaccaattc chr9:139475765-139475845 30 4.07e-05 attcattcac tcactcat tcactcactc chr17:74329894-74329974 37 5.88e-05 TGTAGACTCT Gcattcat tcattcattc chr17:46933945-46934025 56 5.88e-05 TAAATGCTGT Gcattcat tcattcattc chr9:130318672-130318752 63 5.88e-05 CCTTGCAATG Gcattcat tcattcattc chr6:105518706-105518786 40 8.33e-05 AGTGGTTTTT Acattcat tcattcattc chr4:1170457-1170537 70 8.33e-05 TTCACACAGT Acattcat gca chr19:51973043-51973123 71 8.33e-05 actcattcat acattcat tc chr11:63828129-63828209 23 1.47e-04 TCTCTTTAGt tcattcgt tcattcattc chr10:134143533-13414361 51 1.47e-04 CACGAACACT TCATTCGT TCCTACGTTG chr12:116716184-11671626 48 1.47e-04 GTTACTGTGT Gcactcat tcattcattc chr1:31375731-31375811 40 1.47e-04 CCGGCttcct tcattcct ttattccctc chr4:3491687-3491767 37 1.47e-04 ACCACCCTGC TCAttcct tccttctcct chr1:249199185-249199265 1 1.65e-04 . acactcat ttaacacttg chr4:5123970-5124050 31 1.77e-04 attcattcat tcactcac ccattcactc chr1:16125916-16125996 72 1.77e-04 gttcattcat tcactcac t chr1:22598487-22598567 10 1.77e-04 ttcatttat tcactcac cactccttca chr1:203279328-203279408 37 2.19e-04 TTTTTGATAG tcgttcat ttcattcatt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:95838568-95838648 2.4e-05 36_[+4]_36 chr15:66904169-66904249 2.4e-05 40_[+4]_32 chr3:52057157-52057237 2.4e-05 40_[+4]_32 chr2:9069447-9069527 2.4e-05 25_[+4]_47 chr6:119802427-119802507 2.4e-05 31_[+4]_41 chr12:94154430-94154510 2.4e-05 29_[+4]_43 chr20:48730272-48730352 2.4e-05 61_[+4]_11 chr9:139875293-139875373 2.4e-05 32_[+4]_40 chr7:139707238-139707318 2.4e-05 52_[+4]_20 chr17:77888960-77889040 2.4e-05 31_[+4]_41 chr10:101425220-10142530 2.4e-05 47_[+4]_25 chr9:101668723-101668803 2.4e-05 12_[+4]_60 chr7:98722662-98722742 2.4e-05 47_[+4]_25 chr17:75662056-75662136 2.4e-05 1_[+4]_71 chr6:20533261-20533341 2.4e-05 49_[+4]_23 chr11:33970201-33970281 2.4e-05 21_[+4]_51 chr7:75342043-75342123 2.4e-05 52_[+4]_20 chr4:99752312-99752392 2.4e-05 38_[+4]_34 chr9:132435129-132435209 2.4e-05 65_[+4]_7 chr14:22024832-22024912 2.4e-05 24_[+4]_48 chr16:87972290-87972370 2.4e-05 35_[+4]_37 chr9:136599451-136599531 2.4e-05 23_[+4]_49 chr5:141706939-141707019 2.4e-05 34_[+4]_38 chr1:43525475-43525555 2.4e-05 61_[+4]_11 chr17:75603015-75603095 2.4e-05 53_[+4]_19 chr3:194397342-194397422 2.4e-05 44_[+4]_28 chr1:15772359-15772439 2.4e-05 17_[+4]_55 chr17:37065940-37066020 2.4e-05 57_[+4]_15 chr11:65363531-65363611 2.4e-05 52_[+4]_20 chr7:101191023-101191103 2.4e-05 44_[+4]_28 chr6:119448946-119449026 2.4e-05 40_[+4]_32 chr12:108504784-10850486 4.1e-05 63_[+4]_9 chr10:3104835-3104915 4.1e-05 71_[+4]_1 chr4:7284693-7284773 4.1e-05 52_[+4]_20 chr4:8030251-8030331 4.1e-05 62_[+4]_10 chr1:10894145-10894225 4.1e-05 37_[+4]_35 chr20:43028270-43028350 4.1e-05 15_[+4]_57 chr17:71265277-71265357 4.1e-05 28_[+4]_44 chr2:121700476-121700556 4.1e-05 43_[+4]_29 chr10:3102983-3103063 4.1e-05 47_[+4]_25 chr9:139475765-139475845 4.1e-05 29_[+4]_43 chr17:74329894-74329974 5.9e-05 36_[+4]_36 chr17:46933945-46934025 5.9e-05 55_[+4]_17 chr9:130318672-130318752 5.9e-05 62_[+4]_10 chr6:105518706-105518786 8.3e-05 39_[+4]_33 chr4:1170457-1170537 8.3e-05 69_[+4]_3 chr19:51973043-51973123 8.3e-05 70_[+4]_2 chr11:63828129-63828209 0.00015 22_[+4]_50 chr10:134143533-13414361 0.00015 50_[+4]_22 chr12:116716184-11671626 0.00015 47_[+4]_25 chr1:31375731-31375811 0.00015 39_[+4]_33 chr4:3491687-3491767 0.00015 36_[+4]_36 chr1:249199185-249199265 0.00016 [+4]_72 chr4:5123970-5124050 0.00018 30_[+4]_42 chr1:16125916-16125996 0.00018 71_[+4]_1 chr1:22598487-22598567 0.00018 9_[+4]_63 chr1:203279328-203279408 0.00022 36_[+4]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCATTCAT width=8 seqs=57 chr9:95838568-95838648 ( 37) TCATTCAT 1 chr15:66904169-66904249 ( 41) TCATTCAT 1 chr3:52057157-52057237 ( 41) TCATTCAT 1 chr2:9069447-9069527 ( 26) TCATTCAT 1 chr6:119802427-119802507 ( 32) TCATTCAT 1 chr12:94154430-94154510 ( 30) TCATTCAT 1 chr20:48730272-48730352 ( 62) TCATTCAT 1 chr9:139875293-139875373 ( 33) TCATTCAT 1 chr7:139707238-139707318 ( 53) TCATTCAT 1 chr17:77888960-77889040 ( 32) TCATTCAT 1 chr10:101425220-10142530 ( 48) TCATTCAT 1 chr9:101668723-101668803 ( 13) TCATTCAT 1 chr7:98722662-98722742 ( 48) TCATTCAT 1 chr17:75662056-75662136 ( 2) TCATTCAT 1 chr6:20533261-20533341 ( 50) TCATTCAT 1 chr11:33970201-33970281 ( 22) TCATTCAT 1 chr7:75342043-75342123 ( 53) TCATTCAT 1 chr4:99752312-99752392 ( 39) TCATTCAT 1 chr9:132435129-132435209 ( 66) TCATTCAT 1 chr14:22024832-22024912 ( 25) TCATTCAT 1 chr16:87972290-87972370 ( 36) TCATTCAT 1 chr9:136599451-136599531 ( 24) TCATTCAT 1 chr5:141706939-141707019 ( 35) TCATTCAT 1 chr1:43525475-43525555 ( 62) TCATTCAT 1 chr17:75603015-75603095 ( 54) TCATTCAT 1 chr3:194397342-194397422 ( 45) TCATTCAT 1 chr1:15772359-15772439 ( 18) TCATTCAT 1 chr17:37065940-37066020 ( 58) TCATTCAT 1 chr11:65363531-65363611 ( 53) TCATTCAT 1 chr7:101191023-101191103 ( 45) TCATTCAT 1 chr6:119448946-119449026 ( 41) TCATTCAT 1 chr12:108504784-10850486 ( 64) TCACTCAT 1 chr10:3104835-3104915 ( 72) TCACTCAT 1 chr4:7284693-7284773 ( 53) TCACTCAT 1 chr4:8030251-8030331 ( 63) TCACTCAT 1 chr1:10894145-10894225 ( 38) TCACTCAT 1 chr20:43028270-43028350 ( 16) TCACTCAT 1 chr17:71265277-71265357 ( 29) TCACTCAT 1 chr2:121700476-121700556 ( 44) TCACTCAT 1 chr10:3102983-3103063 ( 48) TCACTCAT 1 chr9:139475765-139475845 ( 30) TCACTCAT 1 chr17:74329894-74329974 ( 37) GCATTCAT 1 chr17:46933945-46934025 ( 56) GCATTCAT 1 chr9:130318672-130318752 ( 63) GCATTCAT 1 chr6:105518706-105518786 ( 40) ACATTCAT 1 chr4:1170457-1170537 ( 70) ACATTCAT 1 chr19:51973043-51973123 ( 71) ACATTCAT 1 chr11:63828129-63828209 ( 23) TCATTCGT 1 chr10:134143533-13414361 ( 51) TCATTCGT 1 chr12:116716184-11671626 ( 48) GCACTCAT 1 chr1:31375731-31375811 ( 40) TCATTCCT 1 chr4:3491687-3491767 ( 37) TCATTCCT 1 chr1:249199185-249199265 ( 1) ACACTCAT 1 chr4:5123970-5124050 ( 31) TCACTCAC 1 chr1:16125916-16125996 ( 72) TCACTCAC 1 chr1:22598487-22598567 ( 10) TCACTCAC 1 chr1:203279328-203279408 ( 37) TCGTTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2866 E= 1.9e-044 -206 -1248 -163 159 -1248 229 -1248 -1248 174 -1248 -363 -1248 -1248 37 -1248 137 -1248 -1248 -1248 181 -1248 229 -1248 -1248 166 -254 -263 -1248 -1248 -196 -1248 173 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 57 E= 1.9e-044 0.070175 0.000000 0.070175 0.859649 0.000000 1.000000 0.000000 0.000000 0.982456 0.000000 0.017544 0.000000 0.000000 0.263158 0.000000 0.736842 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.929825 0.035088 0.035088 0.000000 0.000000 0.052632 0.000000 0.947368 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATTCAT MEME-4 regular expression -------------------------------------------------------------------------------- TCA[TC]TCAT -------------------------------------------------------------------------------- Time 14.57 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAATGAR MEME-5 width = 8 sites = 67 llr = 585 E-value = 7.6e-049 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a9::96 pos.-specific C :::::::: probability G :a:1:a14 matrix T a:::a::: bits 2.3 * * 2.1 * * 1.8 * * 1.6 *** ** Relative 1.4 ******* Entropy 1.1 ******* (12.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGAATGAA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:100301266-100301346 12 2.86e-05 aatgaatgaa tgaatgaa tgaatgaaag chr1:114985981-114986061 37 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr20:33275835-33275915 22 2.86e-05 aatgtgcaaa tgaatgaa tgaatgaatA chr5:170918009-170918089 16 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr17:48359513-48359593 32 2.86e-05 aatgggtgca tgaatgaa tgaatgaatg chr6:41978816-41978896 13 2.86e-05 aatgaatgaa tgaatgaa tgaatgaatg chr17:16933917-16933997 23 2.86e-05 aatgaatgaa tgaatgaa tgaatgcatg chr22:40375615-40375695 12 2.86e-05 aatgaatgaa tgaatgaa tgaatgaaag chr19:45924290-45924370 12 2.86e-05 TGCTGTCgaa tgaatgaa tgaatgaatg chr1:18929104-18929184 46 2.86e-05 catgcatgag tgaatgaa tgaatgaatg chr2:9940609-9940689 33 2.86e-05 aatgaatgaa tgaatgaa gagtgaatga chr11:117778572-11777865 41 2.86e-05 gaatgatgag tgaatgaa tgaatgaatg chr1:229574683-229574763 42 2.86e-05 aatgaatgaa tgaatgaa tgatatatag chr1:7613244-7613324 36 2.86e-05 aataagtgag tgaatgaa tgagggaatg chr16:50280940-50281020 25 2.86e-05 AGAGATtgaa tgaatgaa tgaatgaatg chr1:44987490-44987570 59 2.86e-05 aatgaatgag tgaatgaa tgaatgaatg chr11:69224912-69224992 29 2.86e-05 TGGgaatgaa tgaatgaa tgaatgaatg chr1:1694191-1694271 10 2.86e-05 gtctcaaaa tgaatgaa tgaatgaatg chr19:3140711-3140791 30 2.86e-05 caagaaatGC tgaatgaa tgaatgaatg chr6:28910021-28910101 14 2.86e-05 agtgaatgaa tgaatgaa tgaatgaatg chr7:116562737-116562817 33 2.86e-05 aatgaatgaa tgaatgaa cgaatgaatg chr2:70176373-70176453 21 2.86e-05 ggcgaatgaa tgaatgaa tgaatgaatg chr17:35182544-35182624 26 2.86e-05 aatgagtgaa tgaatgaa tgagtgaatg chr10:5404984-5405064 35 2.86e-05 aactaatgaa tgaatgaa tgaatgaact chr19:4232758-4232838 22 2.86e-05 aattaatgaa tgaatgaa ggaatgaatt chr1:40838545-40838625 13 2.86e-05 AGtgaatgaa tgaatgaa tgagtgaatg chr9:139042642-139042722 53 4.97e-05 aatgagtgag tgaatgag tgagtgaatg chr9:132019770-132019850 39 4.97e-05 aatgaatgaa tgaatgag tgaatgaatg chr22:50336346-50336426 59 4.97e-05 agtgaatgag tgaatgag tgagtgaatg chr1:246299985-246300065 56 4.97e-05 aatgaataag tgaatgag tgggcatata chr7:65540386-65540466 35 4.97e-05 aatgaatgag tgaatgag cgaaCATGCC chr19:8154048-8154128 26 4.97e-05 agccaaggag tgaatgag tgagtgaatt chr1:15759475-15759555 38 4.97e-05 gtGGGAGgaa tgaatgag tgaatgaata chr10:13481506-13481586 4 4.97e-05 gaa tgaatgag tgaatgaatg chr16:88281232-88281312 56 4.97e-05 cgtgaatgac tgaatgag tgagtgagtg chr21:45632039-45632119 51 4.97e-05 GACTGTGTGA TGAATGAG GGAATGTGTG chr4:5258961-5259041 70 4.97e-05 agtgaatgaa tgaatgag tag chr7:73914022-73914102 73 4.97e-05 CACCAAGGAA TGAATGAG chr1:1899461-1899541 66 4.97e-05 gagtaaagag tgaatgag tgaatga chr7:696755-696835 28 4.97e-05 aatgaatgaa tgaatgag tgaacaaatg chr11:1223157-1223237 4 4.97e-05 aag tgaatgag tgagtgagcg chr3:9722830-9722910 30 4.97e-05 ACtgaatgaa tgaatgag tgaatgaatg chr8:8374876-8374956 11 4.97e-05 aatgaatgaa tgaatgag tgaatgaatg chr19:17593835-17593915 19 4.97e-05 aaggagggaa tgaatgag ggaacgagtg chr5:1035309-1035389 17 4.97e-05 agtgagttaa tgaatgag tgaacgagtg chr20:62175271-62175351 33 4.97e-05 aatgaacgag tgaatgag atgaatggat chr16:23159745-23159825 32 7.08e-05 agtgagtgag tgagtgaa taaatgaatg chr17:78954644-78954724 48 8.63e-05 aatgagtaaa tgagtgag ccagtgaggg chr2:209043859-209043939 20 8.63e-05 agtgaatgaa tgagtgag tgaatgaatg chr10:82263124-82263204 31 8.63e-05 gttgaatgaa tgagtgag gagtgaatga chr4:3608189-3608269 35 8.63e-05 agcgggtgag tgagtgag caagtgaata chr7:583515-583595 64 1.07e-04 gctaaaggaa tgaatgga caaacatga chr19:8472452-8472532 55 1.07e-04 aatgaatgaa tgaatgGA GACTGGGAAG chr20:31201620-31201700 4 1.07e-04 gga tgaatgga tgaattaatg chr3:193789323-193789403 62 1.07e-04 aacgaacaaa tgaatgGA CGCGCGCACA chr18:9931315-9931395 14 1.07e-04 TGtgaatgaa tgaatgga ttgaatgaat chr7:116823960-116824040 45 1.66e-04 tgctacaaca tggatgaa tctcaaaaac chr19:13869372-13869452 62 1.66e-04 aatggatgag ggaatgaa tgaatgaaCA chr2:171999583-171999663 27 1.66e-04 actgaatgaa ggaatgaa tgaatgaatg chr18:9013052-9013132 1 1.66e-04 . ggaatgaa ggaatgaatg chr1:26718088-26718168 34 1.97e-04 TTAGTGATGG TGGATGAG GAAAGGGGTC chr5:148933891-148933971 24 2.25e-04 aatgaatgaa tgaatgaT AGGTACTTGT chr4:703162-703242 39 2.25e-04 AAGGCAAgag tgaatgat gcatgaacaa chr5:173131792-173131872 30 2.63e-04 GTAGAGGCAA TGAAGGAG GCTGGAGGAA chr9:132191596-132191676 46 2.79e-04 AGGAAGGGGC TGAGTGGA GAGGGAATGG chr2:118790046-118790126 29 3.22e-04 gatagatgga tgggtgaa tgaatgaatg chr16:84266715-84266795 62 4.57e-04 catgacccct tgagggaa gtgcttagag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:100301266-100301346 2.9e-05 11_[+5]_61 chr1:114985981-114986061 2.9e-05 36_[+5]_36 chr20:33275835-33275915 2.9e-05 21_[+5]_51 chr5:170918009-170918089 2.9e-05 15_[+5]_57 chr17:48359513-48359593 2.9e-05 31_[+5]_41 chr6:41978816-41978896 2.9e-05 12_[+5]_60 chr17:16933917-16933997 2.9e-05 22_[+5]_50 chr22:40375615-40375695 2.9e-05 11_[+5]_61 chr19:45924290-45924370 2.9e-05 11_[+5]_61 chr1:18929104-18929184 2.9e-05 45_[+5]_27 chr2:9940609-9940689 2.9e-05 32_[+5]_40 chr11:117778572-11777865 2.9e-05 40_[+5]_32 chr1:229574683-229574763 2.9e-05 41_[+5]_31 chr1:7613244-7613324 2.9e-05 35_[+5]_37 chr16:50280940-50281020 2.9e-05 24_[+5]_48 chr1:44987490-44987570 2.9e-05 58_[+5]_14 chr11:69224912-69224992 2.9e-05 28_[+5]_44 chr1:1694191-1694271 2.9e-05 9_[+5]_63 chr19:3140711-3140791 2.9e-05 29_[+5]_43 chr6:28910021-28910101 2.9e-05 13_[+5]_59 chr7:116562737-116562817 2.9e-05 32_[+5]_40 chr2:70176373-70176453 2.9e-05 20_[+5]_52 chr17:35182544-35182624 2.9e-05 25_[+5]_47 chr10:5404984-5405064 2.9e-05 34_[+5]_38 chr19:4232758-4232838 2.9e-05 21_[+5]_51 chr1:40838545-40838625 2.9e-05 12_[+5]_60 chr9:139042642-139042722 5e-05 52_[+5]_20 chr9:132019770-132019850 5e-05 38_[+5]_34 chr22:50336346-50336426 5e-05 58_[+5]_14 chr1:246299985-246300065 5e-05 55_[+5]_17 chr7:65540386-65540466 5e-05 34_[+5]_38 chr19:8154048-8154128 5e-05 25_[+5]_47 chr1:15759475-15759555 5e-05 37_[+5]_35 chr10:13481506-13481586 5e-05 3_[+5]_69 chr16:88281232-88281312 5e-05 55_[+5]_17 chr21:45632039-45632119 5e-05 50_[+5]_22 chr4:5258961-5259041 5e-05 69_[+5]_3 chr7:73914022-73914102 5e-05 72_[+5] chr1:1899461-1899541 5e-05 65_[+5]_7 chr7:696755-696835 5e-05 27_[+5]_45 chr11:1223157-1223237 5e-05 3_[+5]_69 chr3:9722830-9722910 5e-05 29_[+5]_43 chr8:8374876-8374956 5e-05 10_[+5]_62 chr19:17593835-17593915 5e-05 18_[+5]_54 chr5:1035309-1035389 5e-05 16_[+5]_56 chr20:62175271-62175351 5e-05 32_[+5]_40 chr16:23159745-23159825 7.1e-05 31_[+5]_41 chr17:78954644-78954724 8.6e-05 47_[+5]_25 chr2:209043859-209043939 8.6e-05 19_[+5]_53 chr10:82263124-82263204 8.6e-05 30_[+5]_42 chr4:3608189-3608269 8.6e-05 34_[+5]_38 chr7:583515-583595 0.00011 63_[+5]_9 chr19:8472452-8472532 0.00011 54_[+5]_18 chr20:31201620-31201700 0.00011 3_[+5]_69 chr3:193789323-193789403 0.00011 61_[+5]_11 chr18:9931315-9931395 0.00011 13_[+5]_59 chr7:116823960-116824040 0.00017 44_[+5]_28 chr19:13869372-13869452 0.00017 61_[+5]_11 chr2:171999583-171999663 0.00017 26_[+5]_46 chr18:9013052-9013132 0.00017 [+5]_72 chr1:26718088-26718168 0.0002 33_[+5]_39 chr5:148933891-148933971 0.00023 23_[+5]_49 chr4:703162-703242 0.00023 38_[+5]_34 chr5:173131792-173131872 0.00026 29_[+5]_43 chr9:132191596-132191676 0.00028 45_[+5]_27 chr2:118790046-118790126 0.00032 28_[+5]_44 chr16:84266715-84266795 0.00046 61_[+5]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAATGAR width=8 seqs=67 chr8:100301266-100301346 ( 12) TGAATGAA 1 chr1:114985981-114986061 ( 37) TGAATGAA 1 chr20:33275835-33275915 ( 22) TGAATGAA 1 chr5:170918009-170918089 ( 16) TGAATGAA 1 chr17:48359513-48359593 ( 32) TGAATGAA 1 chr6:41978816-41978896 ( 13) TGAATGAA 1 chr17:16933917-16933997 ( 23) TGAATGAA 1 chr22:40375615-40375695 ( 12) TGAATGAA 1 chr19:45924290-45924370 ( 12) TGAATGAA 1 chr1:18929104-18929184 ( 46) TGAATGAA 1 chr2:9940609-9940689 ( 33) TGAATGAA 1 chr11:117778572-11777865 ( 41) TGAATGAA 1 chr1:229574683-229574763 ( 42) TGAATGAA 1 chr1:7613244-7613324 ( 36) TGAATGAA 1 chr16:50280940-50281020 ( 25) TGAATGAA 1 chr1:44987490-44987570 ( 59) TGAATGAA 1 chr11:69224912-69224992 ( 29) TGAATGAA 1 chr1:1694191-1694271 ( 10) TGAATGAA 1 chr19:3140711-3140791 ( 30) TGAATGAA 1 chr6:28910021-28910101 ( 14) TGAATGAA 1 chr7:116562737-116562817 ( 33) TGAATGAA 1 chr2:70176373-70176453 ( 21) TGAATGAA 1 chr17:35182544-35182624 ( 26) TGAATGAA 1 chr10:5404984-5405064 ( 35) TGAATGAA 1 chr19:4232758-4232838 ( 22) TGAATGAA 1 chr1:40838545-40838625 ( 13) TGAATGAA 1 chr9:139042642-139042722 ( 53) TGAATGAG 1 chr9:132019770-132019850 ( 39) TGAATGAG 1 chr22:50336346-50336426 ( 59) TGAATGAG 1 chr1:246299985-246300065 ( 56) TGAATGAG 1 chr7:65540386-65540466 ( 35) TGAATGAG 1 chr19:8154048-8154128 ( 26) TGAATGAG 1 chr1:15759475-15759555 ( 38) TGAATGAG 1 chr10:13481506-13481586 ( 4) TGAATGAG 1 chr16:88281232-88281312 ( 56) TGAATGAG 1 chr21:45632039-45632119 ( 51) TGAATGAG 1 chr4:5258961-5259041 ( 70) TGAATGAG 1 chr7:73914022-73914102 ( 73) TGAATGAG 1 chr1:1899461-1899541 ( 66) TGAATGAG 1 chr7:696755-696835 ( 28) TGAATGAG 1 chr11:1223157-1223237 ( 4) TGAATGAG 1 chr3:9722830-9722910 ( 30) TGAATGAG 1 chr8:8374876-8374956 ( 11) TGAATGAG 1 chr19:17593835-17593915 ( 19) TGAATGAG 1 chr5:1035309-1035389 ( 17) TGAATGAG 1 chr20:62175271-62175351 ( 33) TGAATGAG 1 chr16:23159745-23159825 ( 32) TGAGTGAA 1 chr17:78954644-78954724 ( 48) TGAGTGAG 1 chr2:209043859-209043939 ( 20) TGAGTGAG 1 chr10:82263124-82263204 ( 31) TGAGTGAG 1 chr4:3608189-3608269 ( 35) TGAGTGAG 1 chr7:583515-583595 ( 64) TGAATGGA 1 chr19:8472452-8472532 ( 55) TGAATGGA 1 chr20:31201620-31201700 ( 4) TGAATGGA 1 chr3:193789323-193789403 ( 62) TGAATGGA 1 chr18:9931315-9931395 ( 14) TGAATGGA 1 chr7:116823960-116824040 ( 45) TGGATGAA 1 chr19:13869372-13869452 ( 62) GGAATGAA 1 chr2:171999583-171999663 ( 27) GGAATGAA 1 chr18:9013052-9013132 ( 1) GGAATGAA 1 chr1:26718088-26718168 ( 34) TGGATGAG 1 chr5:148933891-148933971 ( 24) TGAATGAT 1 chr4:703162-703242 ( 39) TGAATGAT 1 chr5:173131792-173131872 ( 30) TGAAGGAG 1 chr9:132191596-132191676 ( 46) TGAGTGGA 1 chr2:118790046-118790126 ( 29) TGGGTGAA 1 chr16:84266715-84266795 ( 62) TGAGGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.44204 E= 7.6e-049 -1271 -1271 -228 174 -1271 -1271 220 -1271 170 -1271 -228 -1271 158 -1271 -86 -1271 -1271 -1271 -286 177 -1271 -1271 220 -1271 163 -1271 -128 -1271 99 -1271 84 -325 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 67 E= 7.6e-049 0.000000 0.000000 0.044776 0.955224 0.000000 0.000000 1.000000 0.000000 0.955224 0.000000 0.044776 0.000000 0.880597 0.000000 0.119403 0.000000 0.000000 0.000000 0.029851 0.970149 0.000000 0.000000 1.000000 0.000000 0.910448 0.000000 0.089552 0.000000 0.582090 0.000000 0.388060 0.029851 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAR MEME-5 regular expression -------------------------------------------------------------------------------- TGAATGA[AG] -------------------------------------------------------------------------------- Time 17.65 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:30101632-30101712 6.45e-01 80 chr19:55967528-55967608 9.93e-01 80 chr8:142386051-142386131 6.66e-01 80 chr10:106100483-10610056 1.18e-01 80 chr19:3171966-3172046 6.06e-01 80 chr3:151912357-151912437 6.17e-01 80 chr8:143836229-143836309 9.08e-01 80 chr19:47921197-47921277 1.39e-05 66_[+1(2.86e-05)]_6 chr6:20092344-20092424 4.97e-06 16_[+1(2.86e-05)]_4_[+1(2.86e-05)]_\ 44 chr5:145422730-145422810 3.37e-04 60_[+3(2.37e-05)]_[+3(9.17e-05)]_4 chr15:80353211-80353291 3.99e-01 80 chr1:40838545-40838625 5.08e-05 4_[+1(2.86e-05)]_[+1(2.86e-05)]_4_\ [+1(2.86e-05)]_48 chr6:119448946-119449026 1.71e-04 40_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ [+3(2.37e-05)]_12 chr12:50899409-50899489 8.30e-01 80 chr1:249199185-249199265 3.57e-07 16_[+1(2.86e-05)]_[+5(4.97e-05)]_48 chr4:3491687-3491767 3.37e-04 6_[+3(2.37e-05)]_22_[+3(9.17e-05)]_\ 15_[+3(2.37e-05)]_13 chr1:23856696-23856776 3.46e-05 12_[+1(2.86e-05)]_60 chr19:4232758-4232838 4.78e-05 17_[+1(2.86e-05)]_16_[+1(2.86e-05)]_\ 8_[+1(2.86e-05)]_[+1(2.86e-05)]_7 chr7:101191023-101191103 3.37e-04 12_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ 4_[+3(2.37e-05)]_[+3(2.37e-05)]_8_[+3(2.37e-05)]_4_[+3(2.37e-05)] chr18:826662-826742 5.35e-05 4_[+1(2.86e-05)]_[+1(2.86e-05)]_60 chr17:25650976-25651056 5.17e-02 80 chr10:5404984-5405064 5.10e-05 30_[+1(2.86e-05)]_[+1(2.86e-05)]_8_\ [+1(2.86e-05)]_[+1(2.86e-05)]_10 chr7:73986709-73986789 5.43e-01 80 chr18:9931315-9931395 1.43e-05 5_[+1(2.86e-05)]_9_[+1(2.86e-05)]_\ 50 chr11:65363531-65363611 1.03e-04 44_[+3(2.37e-05)]_[+3(2.37e-05)]_20 chr1:40498100-40498180 1.47e-01 80 chr1:203279328-203279408 2.81e-04 36_[+3(9.17e-05)]_1_[+3(2.37e-05)]_\ [+3(2.37e-05)]_19 chr17:35182544-35182624 5.00e-05 1_[+1(2.86e-05)]_[+2(4.97e-05)]_4_\ [+1(2.86e-05)]_4_[+2(4.97e-05)]_4_[+1(2.86e-05)]_[+5(4.97e-05)]_\ [+1(2.86e-05)]_11 chr17:37065940-37066020 1.69e-04 41_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_7 chrX:154251034-154251114 5.36e-02 80 chr8:144025942-144026022 9.52e-01 80 chr2:70176373-70176453 5.04e-05 16_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_32 chr14:105043138-10504321 2.57e-01 80 chr22:40343954-40344034 9.85e-01 80 chr1:15772359-15772439 3.08e-04 17_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ 20_[+3(2.37e-05)]_15 chr7:116562737-116562817 2.50e-05 12_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_8_[+1(2.86e-05)]_28 chrX:119798083-119798163 2.34e-05 15_[+1(2.86e-05)]_[+1(2.86e-05)]_49 chr12:53320739-53320819 1.25e-05 1_[+1(2.86e-05)]_[+1(2.86e-05)]_63 chr6:28910021-28910101 5.03e-05 5_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_51 chr17:48961800-48961880 9.94e-01 80 chr9:118929141-118929221 4.09e-05 15_[+2(6.95e-05)]_[+1(2.86e-05)]_49 chr3:158491061-158491141 8.42e-01 80 chr3:194397342-194397422 3.37e-04 4_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ [+3(5.77e-05)]_[+4(4.07e-05)]_4_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)] chr1:55894656-55894736 3.66e-05 8_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+5(4.97e-05)]_48 chr11:14170364-14170444 2.21e-02 20_[+1(5.54e-05)]_52 chr2:118790046-118790126 5.57e-05 32_[+1(2.86e-05)]_[+1(2.86e-05)]_32 chr19:3140711-3140791 2.25e-05 29_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_27 chr17:75603015-75603095 3.37e-04 14_[+3(2.37e-05)]_3_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_[+3(2.37e-05)]_[+3(2.37e-05)]_15 chr19:3281806-3281886 8.64e-01 80 chr1:43525475-43525555 3.37e-04 37_[+3(2.37e-05)]_[+3(2.37e-05)]_8_\ [+3(2.37e-05)]_[+3(2.37e-05)]_3 chr16:85476051-85476131 5.56e-05 1_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_55 chr12:114163449-11416352 7.61e-02 80 chr5:141706939-141707019 1.79e-04 30_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+4(4.07e-05)]_4_[+3(2.37e-05)]_6 chr16:84266715-84266795 1.74e-01 80 chr19:1508696-1508776 9.46e-01 80 chr1:22598487-22598567 2.40e-03 60_[+3(5.77e-05)]_2_[+3(4.07e-05)]_\ 2 chr4:6942629-6942709 4.54e-05 5_[+1(2.86e-05)]_4_[+1(2.86e-05)]_\ 55 chr18:9013052-9013132 4.28e-05 12_[+1(2.86e-05)]_[+2(4.97e-05)]_52 chr10:49515777-49515857 9.20e-01 80 chr19:48394289-48394369 1.26e-05 3_[+1(2.86e-05)]_[+1(2.86e-05)]_61 chr20:62175271-62175351 5.43e-05 1_[+2(4.97e-05)]_4_[+5(8.63e-05)]_\ 11_[+5(4.97e-05)]_9_[+1(2.86e-05)]_4_[+2(4.97e-05)]_11 chr1:1694191-1694271 1.68e-05 9_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_39 chr17:41162714-41162794 2.56e-04 38_[+3(2.37e-05)]_34 chr9:136599451-136599531 3.37e-04 3_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ [+3(2.37e-05)]_4_[+3(2.37e-05)]_[+3(5.77e-05)]_[+3(2.37e-05)]_\ [+3(5.77e-05)]_[+3(2.37e-05)]_5 chr11:6490139-6490219 4.38e-01 80 chr9:135717635-135717715 1.28e-02 80 chr6:159026526-159026606 7.87e-01 80 chr6:108617028-108617108 6.15e-01 80 chr19:35872375-35872455 4.89e-01 80 chr5:180215782-180215862 9.91e-01 80 chr15:78609842-78609922 1.26e-05 61_[+1(2.86e-05)]_[+1(2.86e-05)]_3 chr18:11741638-11741718 1.70e-05 2_[+1(2.86e-05)]_[+1(2.86e-05)]_62 chr14:23266640-23266720 1.59e-01 80 chr17:36832217-36832297 1.94e-05 49_[+1(2.86e-05)]_[+5(4.97e-05)]_15 chr16:87972290-87972370 1.98e-04 3_[+3(5.77e-05)]_8_[+3(2.37e-05)]_8_\ [+3(2.37e-05)]_16_[+3(2.37e-05)]_4_[+3(2.37e-05)]_1 chr12:125346971-12534705 2.11e-04 47_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ 13 chr11:69224912-69224992 1.94e-05 24_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_24 chr14:22024832-22024912 1.73e-04 20_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_36 chr8:98908908-98908988 9.95e-01 80 chr21:43972679-43972759 1.63e-05 6_[+1(2.86e-05)]_66 chr9:132435129-132435209 3.37e-04 33_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_[+3(2.37e-05)]_7 chr5:173131792-173131872 1.08e-03 [+2(4.97e-05)]_72 chr1:44987490-44987570 3.50e-05 46_[+1(2.86e-05)]_4_[+1(2.86e-05)]_\ [+1(2.86e-05)]_6 chr16:50280940-50281020 4.49e-05 20_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_36 chr3:72936999-72937079 5.37e-05 20_[+2(4.97e-05)]_28_[+1(2.86e-05)]_\ 16 chr1:7613244-7613324 4.54e-05 3_[+2(4.97e-05)]_8_[+2(4.97e-05)]_8_\ [+1(2.86e-05)]_8_[+1(2.86e-05)]_8_[+1(2.86e-05)]_5 chr4:99752312-99752392 3.36e-04 14_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_[+3(2.37e-05)]_26 chr1:229574683-229574763 2.13e-05 17_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_31 chr5:1035309-1035389 1.09e-03 20_[+2(4.97e-05)]_16_[+2(4.97e-05)]_\ 4_[+5(8.63e-05)]_8_[+2(4.97e-05)] chr9:139475765-139475845 3.37e-04 5_[+4(4.07e-05)]_4_[+3(2.37e-05)]_4_\ [+4(4.07e-05)]_4_[+4(4.07e-05)]_31 chr1:16125916-16125996 2.83e-04 47_[+3(2.37e-05)]_8_[+3(2.37e-05)]_\ 9 chr19:51973043-51973123 1.51e-05 62_[+3(2.37e-05)]_[+4(8.33e-05)]_2 chr3:193789323-193789403 3.34e-05 21_[+1(2.86e-05)]_4_[+1(2.86e-05)]_\ 39 chr7:75342043-75342123 2.73e-04 4_[+4(4.07e-05)]_8_[+3(5.77e-05)]_4_\ [+3(5.77e-05)]_12_[+3(2.37e-05)]_8_[+3(2.37e-05)]_4 chr11:33903337-33903417 1.11e-01 80 chr16:81498032-81498112 2.82e-06 68_[+3(2.37e-05)]_4 chr14:101321909-10132198 2.98e-02 59_[+3(4.07e-05)]_13 chr19:17593835-17593915 5.57e-05 2_[+2(4.97e-05)]_8_[+5(4.97e-05)]_\ 20_[+1(2.86e-05)]_16_[+1(2.86e-05)]_2 chr1:31375731-31375811 2.89e-04 39_[+3(9.17e-05)]_8_[+3(2.37e-05)]_\ [+3(2.37e-05)]_9 chr12:116716184-11671626 1.87e-04 51_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_5 chr10:71103802-71103882 3.35e-04 28_[+3(2.37e-05)]_[+3(5.77e-05)]_36 chr1:230204338-230204418 7.75e-01 80 chr1:175450350-175450430 2.58e-05 20_[+2(4.97e-05)]_4_[+1(2.86e-05)]_\ 40 chr1:33905388-33905468 1.51e-02 [+3(9.17e-05)]_72 chr8:8374876-8374956 8.03e-06 2_[+1(2.86e-05)]_[+5(4.97e-05)]_\ [+1(2.86e-05)]_54 chr1:23922173-23922253 8.15e-02 80 chr3:9722830-9722910 4.26e-05 21_[+1(2.86e-05)]_[+5(4.97e-05)]_\ [+1(2.86e-05)]_35 chr6:3056128-3056208 3.14e-04 28_[+3(2.37e-05)]_[+3(9.17e-05)]_36 chr3:141522502-141522582 1.64e-02 47_[+3(9.17e-05)]_25 chr18:33631876-33631956 3.68e-02 80 chr3:16090281-16090361 1.67e-05 19_[+1(2.86e-05)]_53 chr21:40174746-40174826 3.52e-05 26_[+1(2.86e-05)]_46 chr11:1223157-1223237 1.11e-03 3_[+5(4.97e-05)]_[+5(8.63e-05)]_12_\ [+5(4.97e-05)]_4_[+5(8.63e-05)]_4_[+2(4.97e-05)]_[+2(4.97e-05)]_9 chr10:3102983-3103063 2.83e-04 21_[+3(2.37e-05)]_18_[+4(4.07e-05)]_\ 12_[+4(4.07e-05)]_5 chr11:117778572-11777865 3.43e-05 17_[+2(4.97e-05)]_15_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_16 chr3:171765651-171765731 6.37e-01 80 chr1:156414361-156414441 6.75e-01 80 chr11:33970201-33970281 3.26e-04 21_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_27 chr10:76561382-76561462 1.85e-05 8_[+1(2.86e-05)]_64 chr4:3608189-3608269 5.57e-05 10_[+1(2.86e-05)]_12_[+5(8.63e-05)]_\ 24_[+5(4.97e-05)]_10 chr7:696755-696835 4.54e-05 15_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+2(4.97e-05)]_16_[+2(4.97e-05)]_17 chr6:20533261-20533341 1.75e-05 49_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_7 chr4:190760676-190760756 9.32e-01 80 chr2:9940609-9940689 4.61e-05 [+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_[+1(2.86e-05)]_3_[+1(2.86e-05)]_4_\ [+1(2.86e-05)]_17 chr1:35324576-35324656 1.07e-03 1_[+2(6.95e-05)]_71 chr2:171999583-171999663 4.80e-05 10_[+2(6.95e-05)]_[+1(2.86e-05)]_4_\ [+1(2.86e-05)]_42 chr7:115904468-115904548 3.37e-04 70_[+3(2.37e-05)]_2 chr1:18929104-18929184 5.39e-06 2_[+1(2.86e-05)]_[+1(2.86e-05)]_7_\ [+1(2.86e-05)]_12_[+1(2.86e-05)]_[+1(2.86e-05)]_8_[+1(2.86e-05)]_3 chr2:121700476-121700556 3.37e-04 15_[+3(2.37e-05)]_24_[+3(2.37e-05)]_\ 25 chr11:69061276-69061356 4.15e-05 3_[+1(2.86e-05)]_69 chr16:31366100-31366180 9.43e-07 1_[+1(2.86e-05)]_71 chr17:75662056-75662136 3.37e-04 1_[+3(2.37e-05)]_8_[+3(2.37e-05)]_\ 11_[+3(5.77e-05)]_7_[+3(5.77e-05)]_4_[+3(2.37e-05)]_[+3(5.77e-05)]_1 chr9:126111120-126111200 1.64e-01 80 chr7:98722662-98722742 1.85e-04 19_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_29 chr10:134143533-13414361 1.22e-02 80 chr11:128392556-12839263 4.59e-01 80 chr1:1899461-1899541 5.51e-05 2_[+5(4.97e-05)]_[+1(2.86e-05)]_12_\ [+5(8.63e-05)]_[+1(2.86e-05)]_[+2(4.97e-05)]_15_[+2(4.97e-05)]_3 chr16:23161213-23161293 9.68e-01 80 chr1:204682218-204682298 1.04e-02 63_[+5(8.63e-05)]_9 chr17:71265277-71265357 1.60e-03 [+3(5.77e-05)]_[+4(4.07e-05)]_12_\ [+4(4.07e-05)]_12_[+4(4.07e-05)]_4_[+4(4.07e-05)]_12 chr12:96455791-96455871 1.08e-03 [+2(4.97e-05)]_72 chr6:30727825-30727905 8.23e-01 80 chr4:1170457-1170537 1.65e-03 27_[+4(8.33e-05)]_34_[+4(8.33e-05)]_\ 3 chr1:172612411-172612491 1.20e-05 2_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+5(4.97e-05)]_54 chr9:101668723-101668803 1.91e-04 8_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_4_[+3(5.77e-05)]_28 chr10:101425220-10142530 2.72e-04 39_[+3(2.37e-05)]_[+3(2.37e-05)]_3_\ [+3(2.37e-05)]_[+3(2.37e-05)]_6 chr20:31201620-31201700 4.78e-05 19_[+1(2.86e-05)]_4_[+1(2.86e-05)]_\ 41 chr9:130318672-130318752 2.29e-04 66_[+3(2.37e-05)]_6 chr1:22267116-22267196 1.53e-04 15_[+3(2.37e-05)]_23_[+3(2.37e-05)]_\ 26 chr6:134432410-134432490 2.69e-04 54_[+3(2.37e-05)]_18 chr7:1177089-1177169 4.17e-05 7_[+1(2.86e-05)]_[+2(6.95e-05)]_57 chr17:77888960-77889040 3.32e-04 27_[+3(2.37e-05)]_[+3(5.77e-05)]_\ [+3(2.37e-05)]_16_[+3(2.37e-05)]_5 chr19:13869372-13869452 1.43e-05 12_[+1(2.86e-05)]_45_[+1(2.86e-05)]_\ 7 chr10:82263124-82263204 1.43e-05 22_[+1(2.86e-05)]_[+5(8.63e-05)]_3_\ [+1(2.86e-05)]_31 chr19:45924290-45924370 3.57e-05 11_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_45 chr19:47139200-47139280 6.83e-01 80 chr1:228085551-228085631 5.08e-05 39_[+1(2.86e-05)]_12_[+2(4.97e-05)]_\ 13 chr7:139707238-139707318 3.37e-04 44_[+3(2.37e-05)]_[+3(2.37e-05)]_4_\ [+3(2.37e-05)]_8 chr1:19284030-19284110 2.16e-04 67_[+3(2.37e-05)]_5 chr5:135700163-135700243 8.56e-03 80 chr17:46933945-46934025 2.09e-04 59_[+3(2.37e-05)]_[+3(2.37e-05)]_5 chr9:139875293-139875373 4.65e-05 28_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_20 chr19:8472452-8472532 5.22e-05 34_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_22 chr17:74329894-74329974 2.98e-04 40_[+3(2.37e-05)]_[+3(2.37e-05)]_24 chr20:48730272-48730352 1.85e-04 33_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_4_[+3(2.37e-05)]_11 chr16:20915313-20915393 2.35e-03 80 chr22:40375615-40375695 5.49e-05 3_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_53 chrX:1610660-1610740 5.12e-05 28_[+1(2.86e-05)]_[+1(2.86e-05)]_36 chr1:65720767-65720847 1.24e-02 69_[+3(4.07e-05)]_3 chr17:16933917-16933997 4.09e-06 2_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_12_[+1(2.86e-05)]_26 chr17:75822350-75822430 6.54e-01 80 chr7:73914022-73914102 1.36e-05 2_[+1(2.86e-05)]_38_[+1(2.86e-05)]_\ 16_[+5(4.97e-05)] chr1:26718088-26718168 5.30e-05 2_[+1(2.86e-05)]_70 chr16:84077766-84077846 2.51e-01 80 chr4:5123970-5124050 2.69e-04 14_[+3(2.37e-05)]_[+3(2.37e-05)]_20_\ [+3(4.07e-05)]_22 chr5:67616105-67616185 6.35e-02 80 chr20:43028270-43028350 1.52e-03 3_[+4(4.07e-05)]_4_[+4(4.07e-05)]_\ 16_[+4(4.07e-05)]_33 chr1:10894145-10894225 2.62e-04 1_[+3(5.77e-05)]_[+3(4.07e-05)]_\ [+4(4.07e-05)]_12_[+4(4.07e-05)]_4_[+3(2.37e-05)]_[+4(4.07e-05)]_15 chr2:43174157-43174237 5.68e-07 32_[+2(6.95e-05)]_21_[+3(2.37e-05)]_\ [+3(2.37e-05)]_3 chr20:31924987-31925067 7.05e-03 59_[+3(4.07e-05)]_13 chr2:105879219-105879299 2.30e-04 80 chr4:703162-703242 2.46e-05 21_[+1(2.86e-05)]_28_[+1(2.86e-05)]_\ 15 chr4:5258961-5259041 5.53e-05 1_[+2(4.97e-05)]_8_[+1(2.86e-05)]_\ [+2(4.97e-05)]_8_[+5(8.63e-05)]_4_[+5(8.63e-05)]_[+1(2.86e-05)]_\ [+5(4.97e-05)]_3 chr5:148933891-148933971 4.94e-05 7_[+1(2.86e-05)]_[+1(2.86e-05)]_57 chr1:155007445-155007525 4.51e-01 80 chr12:94154430-94154510 2.68e-04 29_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_27 chr19:3226295-3226375 5.89e-01 80 chr3:197025730-197025810 2.21e-01 80 chr21:37792550-37792630 5.11e-01 80 chr9:132191596-132191676 3.80e-02 80 chr21:45632039-45632119 4.78e-05 12_[+2(4.97e-05)]_7_[+1(2.86e-05)]_\ 15_[+5(4.97e-05)]_22 chr4:8030251-8030331 2.33e-04 2_[+3(2.37e-05)]_4_[+3(5.77e-05)]_8_\ [+4(4.07e-05)]_12_[+4(4.07e-05)]_4_[+4(4.07e-05)]_10 chr1:186300045-186300125 3.69e-01 80 chr6:41978816-41978896 6.55e-06 [+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_48 chr8:142322473-142322553 3.51e-04 80 chr19:52035341-52035421 1.19e-05 54_[+3(2.37e-05)]_4_[+3(2.37e-05)]_\ 6 chr4:7284693-7284773 3.19e-04 [+3(5.77e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_12_[+4(4.07e-05)]_8_[+4(4.07e-05)]_8_[+3(4.07e-05)]_4 chr11:67276779-67276859 3.37e-04 57_[+3(2.37e-05)]_[+3(2.37e-05)]_7 chr17:48359513-48359593 4.15e-05 4_[+1(2.86e-05)]_19_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_25 chr16:23159745-23159825 1.67e-05 19_[+5(8.63e-05)]_4_[+2(4.97e-05)]_\ 4_[+1(2.86e-05)]_[+1(2.86e-05)]_21 chr1:12222938-12223018 1.04e-01 80 chr17:39734962-39735042 9.93e-06 3_[+1(2.86e-05)]_69 chr6:17876754-17876834 1.26e-01 80 chr2:114006856-114006936 8.42e-01 80 chr19:35747660-35747740 2.39e-01 80 chr9:131646590-131646670 3.42e-01 80 chr16:88281232-88281312 7.71e-04 8_[+5(4.97e-05)]_4_[+5(8.63e-05)]_\ [+2(4.97e-05)]_[+2(4.97e-05)]_3_[+2(6.95e-05)]_[+5(4.97e-05)]_\ [+5(8.63e-05)]_[+2(4.97e-05)]_1 chr1:21148127-21148207 9.42e-01 80 chr2:209043859-209043939 5.57e-05 11_[+1(2.86e-05)]_[+5(8.63e-05)]_\ [+1(2.86e-05)]_45 chr6:119802427-119802507 3.37e-04 11_[+3(2.37e-05)]_8_[+3(2.37e-05)]_\ [+3(2.37e-05)]_4_[+3(2.37e-05)]_4_[+3(2.37e-05)]_13 chr5:170918009-170918089 9.55e-06 3_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_45 chr2:9069447-9069527 2.59e-04 13_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_35 chr15:45497612-45497692 1.50e-02 64_[+3(4.07e-05)]_8 chr7:116823960-116824040 1.02e-03 19_[+2(6.95e-05)]_42_[+2(4.97e-05)]_\ 3 chr3:14967316-14967396 7.38e-03 60_[+3(4.07e-05)]_12 chr6:105518706-105518786 9.31e-05 43_[+3(2.37e-05)]_[+3(2.37e-05)]_21 chr11:63828129-63828209 2.88e-04 30_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_26 chr10:3104835-3104915 1.16e-03 15_[+4(4.07e-05)]_12_[+4(4.07e-05)]_\ 4_[+3(5.77e-05)]_[+3(5.77e-05)]_8_[+4(4.07e-05)]_1 chr10:13481506-13481586 6.55e-06 3_[+5(4.97e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_53 chr5:172192024-172192104 5.45e-06 4_[+1(2.86e-05)]_68 chr9:68453639-68453719 7.39e-02 80 chr1:108642898-108642978 2.74e-02 80 chr19:3501033-3501113 8.98e-05 25_[+3(2.37e-05)]_47 chr1:15759475-15759555 4.33e-05 37_[+5(4.97e-05)]_[+1(2.86e-05)]_8_\ [+1(2.86e-05)]_11 chr3:52057157-52057237 1.49e-04 36_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_12_[+4(5.88e-05)] chr8:125452846-125452926 3.67e-05 33_[+3(2.37e-05)]_[+3(2.37e-05)]_31 chr4:8524462-8524542 4.91e-01 80 chr7:583515-583595 4.26e-05 3_[+2(4.97e-05)]_20_[+1(2.86e-05)]_\ 41 chr19:8154048-8154128 5.43e-05 9_[+5(8.63e-05)]_8_[+5(4.97e-05)]_\ [+2(4.97e-05)]_8_[+1(2.86e-05)]_12_[+5(8.63e-05)]_3 chr17:39710435-39710515 5.45e-05 [+1(2.86e-05)]_[+2(6.95e-05)]_64 chr20:33275835-33275915 3.53e-06 1_[+1(2.86e-05)]_12_[+1(2.86e-05)]_\ [+1(2.86e-05)]_43 chr6:10414677-10414757 5.57e-05 23_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_33 chr1:114985981-114986061 3.43e-05 28_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_[+1(2.86e-05)]_20 chr8:100301266-100301346 5.57e-05 3_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_53 chr1:29111657-29111737 1.48e-05 50_[+1(2.86e-05)]_22 chr7:65540386-65540466 4.50e-05 14_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+2(4.97e-05)]_42 chr17:78954644-78954724 1.71e-03 11_[+5(4.97e-05)]_4_[+5(8.63e-05)]_\ 4_[+5(4.97e-05)]_4_[+5(8.63e-05)]_25 chr1:44313719-44313799 7.03e-01 80 chr6:31543979-31544059 8.84e-02 80 chr15:66904169-66904249 3.18e-04 32_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_16 chr1:47082880-47082960 2.44e-06 56_[+1(2.86e-05)]_8_[+2(4.97e-05)] chr1:246299985-246300065 4.34e-05 2_[+1(2.86e-05)]_33_[+1(2.86e-05)]_\ 4_[+5(4.97e-05)]_17 chr22:50336346-50336426 1.10e-03 2_[+2(4.97e-05)]_4_[+2(4.97e-05)]_8_\ [+2(4.97e-05)]_8_[+2(4.97e-05)]_[+2(4.97e-05)]_4_[+2(4.97e-05)]_6 chr15:101995100-10199518 4.88e-05 55_[+1(2.86e-05)]_[+1(2.86e-05)]_\ [+1(2.86e-05)]_1 chr12:108504784-10850486 3.36e-04 27_[+3(2.37e-05)]_16_[+3(2.37e-05)]_\ 4_[+4(4.07e-05)]_9 chr9:132019770-132019850 1.51e-05 26_[+1(2.86e-05)]_[+1(2.86e-05)]_4_\ [+1(2.86e-05)]_26 chr9:139042642-139042722 1.11e-03 4_[+2(4.97e-05)]_4_[+2(4.97e-05)]_\ [+5(8.63e-05)]_4_[+2(4.97e-05)]_4_[+2(4.97e-05)]_4_[+2(4.97e-05)]_4_\ [+2(4.97e-05)] chr16:88957050-88957130 1.11e-04 61_[+3(2.37e-05)]_[+3(2.37e-05)]_3 chr5:43234263-43234343 4.63e-01 80 chr9:95838568-95838648 2.69e-04 24_[+3(2.37e-05)]_[+3(2.37e-05)]_\ [+3(2.37e-05)]_[+3(2.37e-05)]_24 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************