******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF197.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr18:5295240-5295320 1.0000 80 chr17:65989789-65989869 1.0000 80 chr19:35759327-35759407 1.0000 80 chr6:69345058-69345138 1.0000 80 chr1:9884145-9884225 1.0000 80 chr7:150756605-150756685 1.0000 80 chr9:101558842-101558922 1.0000 80 chr1:10754790-10754870 1.0000 80 chr9:128845127-128845207 1.0000 80 chr1:23999719-23999799 1.0000 80 chr9:95640004-95640084 1.0000 80 chr15:32162968-32163048 1.0000 80 chr10:98592271-98592351 1.0000 80 chr2:10091574-10091654 1.0000 80 chr7:123633166-123633246 1.0000 80 chr17:44344228-44344308 1.0000 80 chr1:40367569-40367649 1.0000 80 chr17:64298558-64298638 1.0000 80 chr8:142726256-142726336 1.0000 80 chr7:130790679-130790759 1.0000 80 chr17:48423472-48423552 1.0000 80 chr20:10415802-10415882 1.0000 80 chr1:169862851-169862931 1.0000 80 chr7:98741748-98741828 1.0000 80 chr19:11071604-11071684 1.0000 80 chr19:7627865-7627945 1.0000 80 chr6:147788748-147788828 1.0000 80 chr2:11262783-11262863 1.0000 80 chr7:116593793-116593873 1.0000 80 chr10:105726806-10572688 1.0000 80 chr10:124671768-12467184 1.0000 80 chr10:124671568-12467164 1.0000 80 chr12:52345344-52345424 1.0000 80 chr3:128444428-128444508 1.0000 80 chr16:71501810-71501890 1.0000 80 chr20:36255546-36255626 1.0000 80 chr1:146849419-146849499 1.0000 80 chr6:79786835-79786915 1.0000 80 chr5:88179057-88179137 1.0000 80 chr5:151304259-151304339 1.0000 80 chr8:74659162-74659242 1.0000 80 chr1:159147229-159147309 1.0000 80 chr1:234745973-234746053 1.0000 80 chr11:221060-221140 1.0000 80 chr2:205335076-205335156 1.0000 80 chr5:176560654-176560734 1.0000 80 chr8:142402135-142402215 1.0000 80 chr9:110438248-110438328 1.0000 80 chr19:37663671-37663751 1.0000 80 chr8:61591142-61591222 1.0000 80 chr12:117296007-11729608 1.0000 80 chr8:74884998-74885078 1.0000 80 chr9:115818988-115819068 1.0000 80 chr8:10847832-10847912 1.0000 80 chr21:44395085-44395165 1.0000 80 chr2:102875170-102875250 1.0000 80 chr19:55195886-55195966 1.0000 80 chr18:5296157-5296237 1.0000 80 chr3:12920899-12920979 1.0000 80 chr16:28303628-28303708 1.0000 80 chr15:76135556-76135636 1.0000 80 chr15:99191713-99191793 1.0000 80 chr9:126872734-126872814 1.0000 80 chr1:35390565-35390645 1.0000 80 chr19:38397307-38397387 1.0000 80 chr8:145560346-145560426 1.0000 80 chr19:48866436-48866516 1.0000 80 chr20:46768480-46768560 1.0000 80 chr20:35012574-35012654 1.0000 80 chr7:123139752-123139832 1.0000 80 chr6:151550341-151550421 1.0000 80 chr15:60314163-60314243 1.0000 80 chr22:22139160-22139240 1.0000 80 chr4:154458940-154459020 1.0000 80 chr11:20000275-20000355 1.0000 80 chr19:4400561-4400641 1.0000 80 chr19:54020423-54020503 1.0000 80 chr3:14639919-14639999 1.0000 80 chr1:226297770-226297850 1.0000 80 chr3:38847432-38847512 1.0000 80 chr7:143067412-143067492 1.0000 80 chr1:236732098-236732178 1.0000 80 chr21:46238027-46238107 1.0000 80 chr19:45988712-45988792 1.0000 80 chr15:68193167-68193247 1.0000 80 chr18:3012840-3012920 1.0000 80 chr7:5497240-5497320 1.0000 80 chr2:181845192-181845272 1.0000 80 chr8:94886445-94886525 1.0000 80 chr1:26376542-26376622 1.0000 80 chr19:49148185-49148265 1.0000 80 chr12:124227713-12422779 1.0000 80 chr1:18748649-18748729 1.0000 80 chr7:1922765-1922845 1.0000 80 chr19:48901968-48902048 1.0000 80 chr1:205744586-205744666 1.0000 80 chr14:36004559-36004639 1.0000 80 chr20:39577460-39577540 1.0000 80 chr20:36170934-36171014 1.0000 80 chr1:206890766-206890846 1.0000 80 chr1:204829229-204829309 1.0000 80 chr17:46903473-46903553 1.0000 80 chr11:925811-925891 1.0000 80 chr6:88118242-88118322 1.0000 80 chr1:223079689-223079769 1.0000 80 chr7:106619688-106619768 1.0000 80 chr18:34850157-34850237 1.0000 80 chr3:170075204-170075284 1.0000 80 chr12:6722268-6722348 1.0000 80 chr17:42277215-42277295 1.0000 80 chr1:247531166-247531246 1.0000 80 chr1:59762285-59762365 1.0000 80 chr12:127388126-12738820 1.0000 80 chr2:175499073-175499153 1.0000 80 chr15:90325476-90325556 1.0000 80 chr5:473096-473176 1.0000 80 chr10:21368166-21368246 1.0000 80 chrX:3619578-3619658 1.0000 80 chr17:46903268-46903348 1.0000 80 chr9:101613898-101613978 1.0000 80 chr7:126747846-126747926 1.0000 80 chr1:207799019-207799099 1.0000 80 chr12:31771253-31771333 1.0000 80 chr22:31741909-31741989 1.0000 80 chr14:64830113-64830193 1.0000 80 chr6:147770814-147770894 1.0000 80 chr11:70496581-70496661 1.0000 80 chr15:45876413-45876493 1.0000 80 chr11:63302427-63302507 1.0000 80 chr9:115096083-115096163 1.0000 80 chr6:164758787-164758867 1.0000 80 chr9:99445933-99446013 1.0000 80 chr19:48673819-48673899 1.0000 80 chr17:35766928-35767008 1.0000 80 chr10:3933013-3933093 1.0000 80 chr11:68034836-68034916 1.0000 80 chr19:52511490-52511570 1.0000 80 chr14:103000325-10300040 1.0000 80 chr15:75287783-75287863 1.0000 80 chr2:205219416-205219496 1.0000 80 chr1:247095504-247095584 1.0000 80 chr19:4342885-4342965 1.0000 80 chr6:69942929-69943009 1.0000 80 chr19:52490136-52490216 1.0000 80 chr5:90587985-90588065 1.0000 80 chr2:47525078-47525158 1.0000 80 chrX:15901595-15901675 1.0000 80 chr18:3013114-3013194 1.0000 80 chr1:110365181-110365261 1.0000 80 chr12:131847301-13184738 1.0000 80 chr6:157801107-157801187 1.0000 80 chr3:57741808-57741888 1.0000 80 chr6:30805766-30805846 1.0000 80 chr8:29474737-29474817 1.0000 80 chr6:37051707-37051787 1.0000 80 chr17:77007680-77007760 1.0000 80 chr12:132090107-13209018 1.0000 80 chr3:156338141-156338221 1.0000 80 chr20:62694374-62694454 1.0000 80 chr2:152237303-152237383 1.0000 80 chr15:76135755-76135835 1.0000 80 chr1:198048682-198048762 1.0000 80 chr14:105780850-10578093 1.0000 80 chr16:12704951-12705031 1.0000 80 chr8:94886649-94886729 1.0000 80 chr16:30103718-30103798 1.0000 80 chr17:73179124-73179204 1.0000 80 chr10:44144331-44144411 1.0000 80 chr3:44482948-44483028 1.0000 80 chr2:192464326-192464406 1.0000 80 chr1:67395843-67395923 1.0000 80 chr18:5296366-5296446 1.0000 80 chr4:74962372-74962452 1.0000 80 chr15:37393427-37393507 1.0000 80 chr20:30556359-30556439 1.0000 80 chr1:2457651-2457731 1.0000 80 chr16:88627273-88627353 1.0000 80 chr1:1822538-1822618 1.0000 80 chr12:55413725-55413805 1.0000 80 chr6:16214828-16214908 1.0000 80 chr12:6717096-6717176 1.0000 80 chr3:101362795-101362875 1.0000 80 chr8:101514061-101514141 1.0000 80 chr2:201991164-201991244 1.0000 80 chr7:30711622-30711702 1.0000 80 chr2:128685144-128685224 1.0000 80 chr19:1407370-1407450 1.0000 80 chr7:150659744-150659824 1.0000 80 chr8:131045149-131045229 1.0000 80 chr6:111140835-111140915 1.0000 80 chr1:212651646-212651726 1.0000 80 chr16:23160815-23160895 1.0000 80 chr6:158425158-158425238 1.0000 80 chr19:13094530-13094610 1.0000 80 chr16:46977447-46977527 1.0000 80 chr16:17176422-17176502 1.0000 80 chr5:176264780-176264860 1.0000 80 chr16:11890888-11890968 1.0000 80 chr5:174905487-174905567 1.0000 80 chr17:41430106-41430186 1.0000 80 chr9:102064162-102064242 1.0000 80 chr17:40687503-40687583 1.0000 80 chr2:42064244-42064324 1.0000 80 chr1:223920397-223920477 1.0000 80 chr4:6717789-6717869 1.0000 80 chr6:158176490-158176570 1.0000 80 chr11:86648343-86648423 1.0000 80 chr5:176560895-176560975 1.0000 80 chr16:1344208-1344288 1.0000 80 chr7:156931670-156931750 1.0000 80 chr3:99495987-99496067 1.0000 80 chr2:152237509-152237589 1.0000 80 chr1:249120375-249120455 1.0000 80 chr16:70473210-70473290 1.0000 80 chr12:127393006-12739308 1.0000 80 chr11:74952808-74952888 1.0000 80 chr12:88535953-88536033 1.0000 80 chr11:97844204-97844284 1.0000 80 chr9:127020150-127020230 1.0000 80 chr12:96476847-96476927 1.0000 80 chr18:903782-903862 1.0000 80 chr6:43215017-43215097 1.0000 80 chr16:84457185-84457265 1.0000 80 chr10:94608262-94608342 1.0000 80 chr21:38939245-38939325 1.0000 80 chr9:99183124-99183204 1.0000 80 chr16:24267335-24267415 1.0000 80 chr15:68193370-68193450 1.0000 80 chr17:46438332-46438412 1.0000 80 chr10:45906823-45906903 1.0000 80 chr14:58765068-58765148 1.0000 80 chr2:48373210-48373290 1.0000 80 chr8:125461724-125461804 1.0000 80 chr7:150755076-150755156 1.0000 80 chr2:61404386-61404466 1.0000 80 chr20:39577659-39577739 1.0000 80 chr3:135232395-135232475 1.0000 80 chr6:10662516-10662596 1.0000 80 chr6:158176290-158176370 1.0000 80 chr16:20956277-20956357 1.0000 80 chr2:97587562-97587642 1.0000 80 chr7:150689945-150690025 1.0000 80 chr4:56608905-56608985 1.0000 80 chr5:5586023-5586103 1.0000 80 chr17:56833111-56833191 1.0000 80 chr16:30583288-30583368 1.0000 80 chr10:26051021-26051101 1.0000 80 chr21:37700023-37700103 1.0000 80 chr2:220094087-220094167 1.0000 80 chr1:11610877-11610957 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF197/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF197.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.207 C 0.296 G 0.292 T 0.205 Background letter frequencies (from file dataset with add-one prior applied): A 0.208 C 0.296 G 0.292 T 0.205 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF AAGATGGA MEME-1 width = 8 sites = 41 llr = 413 E-value = 5.7e-040 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 Description -------------------------------------------------------------------------------- Simplified A aa1a:::9 pos.-specific C :::::::1 probability G ::9::aa: matrix T ::::a::: bits 2.3 ** 2.1 ** ** 1.8 ** ** * 1.6 ** **** Relative 1.4 ** ***** Entropy 1.1 ******** (14.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAGATGGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:26051021-26051101 19 9.55e-06 gcccctattc aagatgga gttgctgtgg chr6:158176290-158176370 18 9.55e-06 ctctgtattc aagatgga gttgctctgg chr8:125461724-125461804 12 9.55e-06 gcctttattc aagatgga gtcactctgg chr10:45906823-45906903 19 9.55e-06 gcccctattc aagatgga gttgctgtgg chr12:127393006-12739308 40 9.55e-06 ggacctattc aagatgga gtggcactgg chr3:99495987-99496067 28 9.55e-06 gcccctattc aagatgga gttgctctgg chr16:1344208-1344288 38 9.55e-06 agccccattc aagatgga gttgctctgg chr1:223920397-223920477 24 9.55e-06 gctcttattc aagatgga gttgctctag chr17:40687503-40687583 6 9.55e-06 tgttc aagatgga gtcgctctgg chr16:17176422-17176502 31 9.55e-06 gcccctattc aagatgga gtcactctgg chr16:46977447-46977527 19 9.55e-06 gccctcattc aagatgga gtcactctag chr2:201991164-201991244 31 9.55e-06 tgaaacagcc aagatgga gtctgtctgg chr4:74962372-74962452 35 9.55e-06 gcccctattc aagatgga gttgctctgg chr3:44482948-44483028 38 9.55e-06 ttccctattc aagatgga gtcactctgg chr12:132090107-13209018 41 9.55e-06 gcccctgttc aagatgga gtcattctgg chr12:131847301-13184738 24 9.55e-06 gtccttgttc aagatgga gtcactctgg chr2:205219416-205219496 16 9.55e-06 gtctttttct aagatgga gttacttatg chr14:103000325-10300040 21 9.55e-06 gcccctgctc aagatgga gttgctctgg chr15:45876413-45876493 15 9.55e-06 agtcctattc aagatgga gttgctctgg chr17:46903268-46903348 37 9.55e-06 gcccctattc aagatgga gtcactctgg chr12:127388126-12738820 9 9.55e-06 tcctgttt aagatgga gttgctcagg chr20:39577460-39577540 28 9.55e-06 gccgctattc aagatgga gttgctctgg chr15:68193167-68193247 31 9.55e-06 ggcactattc aagatgga gttgctctgg chr4:154458940-154459020 16 9.55e-06 gctcctattt aagatgga gttgctctgg chr20:46768480-46768560 1 9.55e-06 . aagatgga gttgctctgg chr7:123633166-123633246 14 9.55e-06 agccctattc aagatgga gtcactctgg chr17:41430106-41430186 16 1.64e-05 gccctccctc aaaatgga gtcgctttgg chr11:63302427-63302507 29 1.64e-05 TAAATATTTC AAAATGGA GTCACTTACG chr12:31771253-31771333 5 1.64e-05 aatc aaaatgga gtcacccatg chr3:57741808-57741888 57 3.00e-05 GCCCTTAACT AAGATGGC GCCTGGAGGC chr19:52511490-52511570 4 3.00e-05 TGC AAGATGGC CGCGCCCTCG chr6:111140835-111140915 13 3.68e-05 tgggggcatc aagataga aatAACtgtc chr20:35012574-35012654 46 3.68e-05 CGTGGTGCTG AAGATAGA GAGGGTAGAG chr15:60314163-60314243 6 4.62e-05 tactc aagatggt gtcgctccag chr17:48423472-48423552 27 4.62e-05 CCCGGGCAGG AAGATGGT GGCGAGCGCG chr4:6717789-6717869 8 5.96e-05 ggaaaca aaggtgga tgcgcgtgaa chr1:223079689-223079769 4 5.96e-05 TCT AAGGTGGA TACAAAGTTA chr6:30805766-30805846 23 6.93e-05 GTATAAGTTC AACATGGA TGCACTTAGG chr10:94608262-94608342 26 9.26e-05 GCTTCCAGCC AAAATGGC GGAGAACAGC chr19:52490136-52490216 55 9.26e-05 CCTACTCTGT AAAATGGC CGCGCCCATA chr1:247531166-247531246 61 9.26e-05 atatttgaac aagaggga ctccatcttg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:26051021-26051101 9.6e-06 18_[+1]_54 chr6:158176290-158176370 9.6e-06 17_[+1]_55 chr8:125461724-125461804 9.6e-06 11_[+1]_61 chr10:45906823-45906903 9.6e-06 18_[+1]_54 chr12:127393006-12739308 9.6e-06 39_[+1]_33 chr3:99495987-99496067 9.6e-06 27_[+1]_45 chr16:1344208-1344288 9.6e-06 37_[+1]_35 chr1:223920397-223920477 9.6e-06 23_[+1]_49 chr17:40687503-40687583 9.6e-06 5_[+1]_67 chr16:17176422-17176502 9.6e-06 30_[+1]_42 chr16:46977447-46977527 9.6e-06 18_[+1]_54 chr2:201991164-201991244 9.6e-06 30_[+1]_42 chr4:74962372-74962452 9.6e-06 34_[+1]_38 chr3:44482948-44483028 9.6e-06 37_[+1]_35 chr12:132090107-13209018 9.6e-06 40_[+1]_32 chr12:131847301-13184738 9.6e-06 23_[+1]_49 chr2:205219416-205219496 9.6e-06 15_[+1]_57 chr14:103000325-10300040 9.6e-06 20_[+1]_52 chr15:45876413-45876493 9.6e-06 14_[+1]_58 chr17:46903268-46903348 9.6e-06 36_[+1]_36 chr12:127388126-12738820 9.6e-06 8_[+1]_64 chr20:39577460-39577540 9.6e-06 27_[+1]_45 chr15:68193167-68193247 9.6e-06 30_[+1]_42 chr4:154458940-154459020 9.6e-06 15_[+1]_57 chr20:46768480-46768560 9.6e-06 [+1]_72 chr7:123633166-123633246 9.6e-06 13_[+1]_59 chr17:41430106-41430186 1.6e-05 15_[+1]_57 chr11:63302427-63302507 1.6e-05 28_[+1]_44 chr12:31771253-31771333 1.6e-05 4_[+1]_68 chr3:57741808-57741888 3e-05 56_[+1]_16 chr19:52511490-52511570 3e-05 3_[+1]_69 chr6:111140835-111140915 3.7e-05 12_[+1]_60 chr20:35012574-35012654 3.7e-05 45_[+1]_27 chr15:60314163-60314243 4.6e-05 5_[+1]_67 chr17:48423472-48423552 4.6e-05 26_[+1]_46 chr4:6717789-6717869 6e-05 7_[+1]_65 chr1:223079689-223079769 6e-05 3_[+1]_69 chr6:30805766-30805846 6.9e-05 22_[+1]_50 chr10:94608262-94608342 9.3e-05 25_[+1]_47 chr19:52490136-52490216 9.3e-05 54_[+1]_18 chr1:247531166-247531246 9.3e-05 60_[+1]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAGATGGA width=8 seqs=41 chr10:26051021-26051101 ( 19) AAGATGGA 1 chr6:158176290-158176370 ( 18) AAGATGGA 1 chr8:125461724-125461804 ( 12) AAGATGGA 1 chr10:45906823-45906903 ( 19) AAGATGGA 1 chr12:127393006-12739308 ( 40) AAGATGGA 1 chr3:99495987-99496067 ( 28) AAGATGGA 1 chr16:1344208-1344288 ( 38) AAGATGGA 1 chr1:223920397-223920477 ( 24) AAGATGGA 1 chr17:40687503-40687583 ( 6) AAGATGGA 1 chr16:17176422-17176502 ( 31) AAGATGGA 1 chr16:46977447-46977527 ( 19) AAGATGGA 1 chr2:201991164-201991244 ( 31) AAGATGGA 1 chr4:74962372-74962452 ( 35) AAGATGGA 1 chr3:44482948-44483028 ( 38) AAGATGGA 1 chr12:132090107-13209018 ( 41) AAGATGGA 1 chr12:131847301-13184738 ( 24) AAGATGGA 1 chr2:205219416-205219496 ( 16) AAGATGGA 1 chr14:103000325-10300040 ( 21) AAGATGGA 1 chr15:45876413-45876493 ( 15) AAGATGGA 1 chr17:46903268-46903348 ( 37) AAGATGGA 1 chr12:127388126-12738820 ( 9) AAGATGGA 1 chr20:39577460-39577540 ( 28) AAGATGGA 1 chr15:68193167-68193247 ( 31) AAGATGGA 1 chr4:154458940-154459020 ( 16) AAGATGGA 1 chr20:46768480-46768560 ( 1) AAGATGGA 1 chr7:123633166-123633246 ( 14) AAGATGGA 1 chr17:41430106-41430186 ( 16) AAAATGGA 1 chr11:63302427-63302507 ( 29) AAAATGGA 1 chr12:31771253-31771333 ( 5) AAAATGGA 1 chr3:57741808-57741888 ( 57) AAGATGGC 1 chr19:52511490-52511570 ( 4) AAGATGGC 1 chr6:111140835-111140915 ( 13) AAGATAGA 1 chr20:35012574-35012654 ( 46) AAGATAGA 1 chr15:60314163-60314243 ( 6) AAGATGGT 1 chr17:48423472-48423552 ( 27) AAGATGGT 1 chr4:6717789-6717869 ( 8) AAGGTGGA 1 chr1:223079689-223079769 ( 4) AAGGTGGA 1 chr6:30805766-30805846 ( 23) AACATGGA 1 chr10:94608262-94608342 ( 26) AAAATGGC 1 chr19:52490136-52490216 ( 55) AAAATGGC 1 chr1:247531166-247531246 ( 61) AAGAGGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.07398 E= 5.7e-040 227 -1200 -1200 -1200 227 -1200 -1200 -1200 -77 -360 155 -1200 220 -1200 -258 -1200 -1200 -1200 -358 225 -209 -1200 170 -1200 -1200 -1200 178 -1200 204 -160 -1200 -207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 41 E= 5.7e-040 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.121951 0.024390 0.853659 0.000000 0.951220 0.000000 0.048780 0.000000 0.000000 0.000000 0.024390 0.975610 0.048780 0.000000 0.951220 0.000000 0.000000 0.000000 1.000000 0.000000 0.853659 0.097561 0.000000 0.048780 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGA MEME-1 regular expression -------------------------------------------------------------------------------- AAGATGGA -------------------------------------------------------------------------------- Time 4.81 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCATCTT MEME-2 width = 8 sites = 53 llr = 477 E-value = 8.0e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::9:::: pos.-specific C :aa::5:: probability G 1::::21: matrix T 8::1a29a bits 2.3 * 2.1 ** * 1.8 * ** ** 1.6 **** ** Relative 1.4 **** ** Entropy 1.1 ***** ** (13.0 bits) 0.9 ***** ** 0.7 ***** ** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCCATCTT consensus G sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:97587562-97587642 52 9.53e-06 ccagagcaac tccatctt gaataggggc chr16:20956277-20956357 46 9.53e-06 ccagagcaac tccatctt gtatagggac chr6:10662516-10662596 47 9.53e-06 ccagagcgac tccatctt gaataggggc chr9:102064162-102064242 59 9.53e-06 ccagagggac tccatctt gaacaggggc chr6:158425158-158425238 50 9.53e-06 ccagagcgac tccatctt gaataggggc chr6:111140835-111140915 52 9.53e-06 ccacagtgac tccatctt gaatagggta chr8:101514061-101514141 65 9.53e-06 catgagtgac tccatctt ggtttggt chr3:101362795-101362875 66 9.53e-06 ccagagtgac tccatctt gaatagg chr2:192464326-192464406 68 9.53e-06 ccagagcaac tccatctt gaata chr8:29474737-29474817 46 9.53e-06 ccagagcaac tccatctt gaatagggac chr2:47525078-47525158 47 9.53e-06 ccagagtgac tccatctt aagtaggggc chr10:3933013-3933093 36 9.53e-06 ctagggcgac tccatctt aaatagagag chr14:64830113-64830193 57 9.53e-06 ccagagcaac tccatctt gaataggggc chrX:3619578-3619658 67 9.53e-06 ccagagcaac tccatctt gaagag chr15:90325476-90325556 71 9.53e-06 ccagagcgat tccatctt ga chr1:247531166-247531246 70 9.53e-06 caagagggac tccatctt gaa chr1:223079689-223079769 47 9.53e-06 ccagagcaac tccatctt aaataggggc chr1:18748649-18748729 52 9.53e-06 caagagtgac tccatctt gaatacaggg chr7:143067412-143067492 69 9.53e-06 ccagagcaac tccatctt gaat chr3:135232395-135232475 10 1.61e-05 ttaactgac tccatttt gcttctaatc chr9:99183124-99183204 34 1.61e-05 ccagagcaac tccatttt aaaaaggagc chr1:212651646-212651726 38 1.61e-05 cacgagtgac tccatttt ggcttggtct chr2:128685144-128685224 35 1.61e-05 catgagtgac tccatttt ggtttggtct chr2:152237303-152237383 41 1.61e-05 catgagtgac tccatttt ggtttggtct chr1:110365181-110365261 71 1.61e-05 CCTCCGCTTC TCCATTTT CT chr9:99445933-99446013 46 1.61e-05 cacaagtgac tccatttt gaatttgaca chr1:26376542-26376622 25 1.61e-05 ctgcctcgct tccatttt ccttccctct chr6:147788748-147788828 57 1.61e-05 CTACTGTAAC TCCATTTT CAAATATTAT chr11:97844204-97844284 54 2.55e-05 cctgagttac tccatgtt gtttatctct chr1:198048682-198048762 44 2.55e-05 cctaagttac tccatgtt gtttatcttt chr1:249120375-249120455 62 3.91e-05 AGTGAGTAGT GCCATCTT GCTTTACGGA chr19:52511490-52511570 44 3.91e-05 CATGGGGGCC GCCATCTT TGAGTATCTG chr9:115818988-115819068 59 3.91e-05 CACGGGCGCG GCCATCTT GGCAAACACT chr20:10415802-10415882 29 3.91e-05 GTGTTTCGCT GCCATCTT AAATCCTGGC chr2:48373210-48373290 6 6.21e-05 ctgct tccttctt caaagccagc chr12:124227713-12422779 45 6.21e-05 CTCTCACCCT TCCTTCTT GGAGGCCACA chr16:84457185-84457265 53 1.11e-04 gtccttggag gccatgtt tctgttcagc chr16:23160815-23160895 32 1.11e-04 CGCCTCGGCC GCCATGTT CACTGTGGGA chr17:77007680-77007760 72 1.11e-04 ccagagcaac accatctt g chr10:21368166-21368246 52 1.11e-04 CAGTAGTACC ACCATCTT GAGATTTTAA chr18:34850157-34850237 52 1.24e-04 TGCTGACCTG TCCATGGT GCTGATCACG chr3:38847432-38847512 13 1.24e-04 GCGTGCGCTA TCCATGGT TCTGAAATAG chr3:12920899-12920979 36 1.24e-04 tccaaggaaa tccatggt gctgaagatg chr8:10847832-10847912 49 1.24e-04 AAGGGAGCTG TCCATGGT CACAACCCAT chr1:159147229-159147309 17 1.24e-04 CTTTGAGCTC TCCATGGT GCTAGCCCCT chr8:142726256-142726336 22 1.24e-04 AGGACTACTG TCCATGGT GCTGGACGGT chr12:131847301-13184738 15 1.58e-04 ttttactcag tccttgtt caagatggag chr1:206890766-206890846 6 1.58e-04 ctgtc cccatctt tcagtttcct chr1:236732098-236732178 15 1.71e-04 CTTCTTAGCT TCAATGTT CTAAAACTTA chr8:74884998-74885078 36 1.71e-04 CCGGTAGAAT TCAATGTT AACTGAAAAC chr6:43215017-43215097 10 1.85e-04 CGGCGAGAC TCCATCTC CCGGCGTGCC chr4:74962372-74962452 12 2.04e-04 aaacctcagc cccatttt gcctagcccc chr19:1407370-1407450 15 2.27e-04 GCGCAGGGAC TCCATTTC CCAGCGTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:97587562-97587642 9.5e-06 51_[+2]_21 chr16:20956277-20956357 9.5e-06 45_[+2]_27 chr6:10662516-10662596 9.5e-06 46_[+2]_26 chr9:102064162-102064242 9.5e-06 58_[+2]_14 chr6:158425158-158425238 9.5e-06 49_[+2]_23 chr6:111140835-111140915 9.5e-06 51_[+2]_21 chr8:101514061-101514141 9.5e-06 64_[+2]_8 chr3:101362795-101362875 9.5e-06 65_[+2]_7 chr2:192464326-192464406 9.5e-06 67_[+2]_5 chr8:29474737-29474817 9.5e-06 45_[+2]_27 chr2:47525078-47525158 9.5e-06 46_[+2]_26 chr10:3933013-3933093 9.5e-06 35_[+2]_37 chr14:64830113-64830193 9.5e-06 56_[+2]_16 chrX:3619578-3619658 9.5e-06 66_[+2]_6 chr15:90325476-90325556 9.5e-06 70_[+2]_2 chr1:247531166-247531246 9.5e-06 69_[+2]_3 chr1:223079689-223079769 9.5e-06 46_[+2]_26 chr1:18748649-18748729 9.5e-06 51_[+2]_21 chr7:143067412-143067492 9.5e-06 68_[+2]_4 chr3:135232395-135232475 1.6e-05 9_[+2]_63 chr9:99183124-99183204 1.6e-05 33_[+2]_39 chr1:212651646-212651726 1.6e-05 37_[+2]_35 chr2:128685144-128685224 1.6e-05 34_[+2]_38 chr2:152237303-152237383 1.6e-05 40_[+2]_32 chr1:110365181-110365261 1.6e-05 70_[+2]_2 chr9:99445933-99446013 1.6e-05 45_[+2]_27 chr1:26376542-26376622 1.6e-05 24_[+2]_48 chr6:147788748-147788828 1.6e-05 56_[+2]_16 chr11:97844204-97844284 2.6e-05 53_[+2]_19 chr1:198048682-198048762 2.6e-05 43_[+2]_29 chr1:249120375-249120455 3.9e-05 61_[+2]_11 chr19:52511490-52511570 3.9e-05 43_[+2]_29 chr9:115818988-115819068 3.9e-05 58_[+2]_14 chr20:10415802-10415882 3.9e-05 28_[+2]_44 chr2:48373210-48373290 6.2e-05 5_[+2]_67 chr12:124227713-12422779 6.2e-05 44_[+2]_28 chr16:84457185-84457265 0.00011 52_[+2]_20 chr16:23160815-23160895 0.00011 31_[+2]_41 chr17:77007680-77007760 0.00011 71_[+2]_1 chr10:21368166-21368246 0.00011 51_[+2]_21 chr18:34850157-34850237 0.00012 51_[+2]_21 chr3:38847432-38847512 0.00012 12_[+2]_60 chr3:12920899-12920979 0.00012 35_[+2]_37 chr8:10847832-10847912 0.00012 48_[+2]_24 chr1:159147229-159147309 0.00012 16_[+2]_56 chr8:142726256-142726336 0.00012 21_[+2]_51 chr12:131847301-13184738 0.00016 14_[+2]_58 chr1:206890766-206890846 0.00016 5_[+2]_67 chr1:236732098-236732178 0.00017 14_[+2]_58 chr8:74884998-74885078 0.00017 35_[+2]_37 chr6:43215017-43215097 0.00019 9_[+2]_63 chr4:74962372-74962452 0.0002 11_[+2]_61 chr19:1407370-1407450 0.00023 14_[+2]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCATCTT width=8 seqs=53 chr2:97587562-97587642 ( 52) TCCATCTT 1 chr16:20956277-20956357 ( 46) TCCATCTT 1 chr6:10662516-10662596 ( 47) TCCATCTT 1 chr9:102064162-102064242 ( 59) TCCATCTT 1 chr6:158425158-158425238 ( 50) TCCATCTT 1 chr6:111140835-111140915 ( 52) TCCATCTT 1 chr8:101514061-101514141 ( 65) TCCATCTT 1 chr3:101362795-101362875 ( 66) TCCATCTT 1 chr2:192464326-192464406 ( 68) TCCATCTT 1 chr8:29474737-29474817 ( 46) TCCATCTT 1 chr2:47525078-47525158 ( 47) TCCATCTT 1 chr10:3933013-3933093 ( 36) TCCATCTT 1 chr14:64830113-64830193 ( 57) TCCATCTT 1 chrX:3619578-3619658 ( 67) TCCATCTT 1 chr15:90325476-90325556 ( 71) TCCATCTT 1 chr1:247531166-247531246 ( 70) TCCATCTT 1 chr1:223079689-223079769 ( 47) TCCATCTT 1 chr1:18748649-18748729 ( 52) TCCATCTT 1 chr7:143067412-143067492 ( 69) TCCATCTT 1 chr3:135232395-135232475 ( 10) TCCATTTT 1 chr9:99183124-99183204 ( 34) TCCATTTT 1 chr1:212651646-212651726 ( 38) TCCATTTT 1 chr2:128685144-128685224 ( 35) TCCATTTT 1 chr2:152237303-152237383 ( 41) TCCATTTT 1 chr1:110365181-110365261 ( 71) TCCATTTT 1 chr9:99445933-99446013 ( 46) TCCATTTT 1 chr1:26376542-26376622 ( 25) TCCATTTT 1 chr6:147788748-147788828 ( 57) TCCATTTT 1 chr11:97844204-97844284 ( 54) TCCATGTT 1 chr1:198048682-198048762 ( 44) TCCATGTT 1 chr1:249120375-249120455 ( 62) GCCATCTT 1 chr19:52511490-52511570 ( 44) GCCATCTT 1 chr9:115818988-115819068 ( 59) GCCATCTT 1 chr20:10415802-10415882 ( 29) GCCATCTT 1 chr2:48373210-48373290 ( 6) TCCTTCTT 1 chr12:124227713-12422779 ( 45) TCCTTCTT 1 chr16:84457185-84457265 ( 53) GCCATGTT 1 chr16:23160815-23160895 ( 32) GCCATGTT 1 chr17:77007680-77007760 ( 72) ACCATCTT 1 chr10:21368166-21368246 ( 52) ACCATCTT 1 chr18:34850157-34850237 ( 52) TCCATGGT 1 chr3:38847432-38847512 ( 13) TCCATGGT 1 chr3:12920899-12920979 ( 36) TCCATGGT 1 chr8:10847832-10847912 ( 49) TCCATGGT 1 chr1:159147229-159147309 ( 17) TCCATGGT 1 chr8:142726256-142726336 ( 22) TCCATGGT 1 chr12:131847301-13184738 ( 15) TCCTTGTT 1 chr1:206890766-206890846 ( 6) CCCATCTT 1 chr1:236732098-236732178 ( 15) TCAATGTT 1 chr8:74884998-74885078 ( 36) TCAATGTT 1 chr6:43215017-43215097 ( 10) TCCATCTC 1 chr4:74962372-74962452 ( 12) CCCATTTT 1 chr19:1407370-1407450 ( 15) TCCATTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.60532 E= 8.0e-037 -246 -297 -137 199 -1237 176 -1237 -1237 -246 170 -1237 -1237 218 -1237 -1237 -185 -1237 -1237 -1237 229 -1237 89 -25 2 -1237 -1237 -137 211 -1237 -297 -1237 223 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 53 E= 8.0e-037 0.037736 0.037736 0.113208 0.811321 0.000000 1.000000 0.000000 0.000000 0.037736 0.962264 0.000000 0.000000 0.943396 0.000000 0.000000 0.056604 0.000000 0.000000 0.000000 1.000000 0.000000 0.547170 0.245283 0.207547 0.000000 0.000000 0.113208 0.886792 0.000000 0.037736 0.000000 0.962264 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-2 regular expression -------------------------------------------------------------------------------- TCCAT[CGT]TT -------------------------------------------------------------------------------- Time 8.50 secs. ******************************************************************************** ******************************************************************************** MOTIF GCGCGCGC MEME-3 width = 8 sites = 66 llr = 541 E-value = 1.2e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1:::::: pos.-specific C :81a:a1a probability G a19:a:9: matrix T :::::::: bits 2.3 2.1 1.8 * ** 1.6 * *** * Relative 1.4 * ***** Entropy 1.1 * ****** (11.8 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCGCGCGC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:220094087-220094167 9 5.58e-05 ccccgTCT GCGCGCGC CAGCAATCAA chr16:70473210-70473290 48 5.58e-05 CCAGAAGACA GCGCGCGC ATCCCAGGGA chr5:174905487-174905567 31 5.58e-05 GCGCTCACAG GCGCGCGC GAGGACGCGC chr16:11890888-11890968 47 5.58e-05 gggggcgcgg gcgcgcgc gTTTCCTTCA chr1:1822538-1822618 43 5.58e-05 GCCGCGCGTC GCGCGCGC TCGCCAGGCC chr14:105780850-10578093 72 5.58e-05 CTCACTTCCG GCGCGCGC T chr17:35766928-35767008 64 5.58e-05 AAGCCCGGAG GCGCGCGC GACCGGCGG chr9:115096083-115096163 59 5.58e-05 ggcccggcgc gcgcgcgc gcccccAGCC chr5:473096-473176 73 5.58e-05 cggggcggcg gcgcgcgc chr17:42277215-42277295 46 5.58e-05 ACGCGAGCGT GCGCGCGC GCGCCCCTCT chr11:925811-925891 41 5.58e-05 cgccgtacgt gcgcgcgc gcgGCGGCCC chr19:48901968-48902048 44 5.58e-05 AAGACGACTC GCGCGCGC CCGCCGTCGC chr2:181845192-181845272 63 5.58e-05 ggcgtcggcg gcgcgcgc cccTCCGCCA chr21:46238027-46238107 54 5.58e-05 ggggcgtcgg gcgcgcgc aggccgggcc chr1:226297770-226297850 53 5.58e-05 CAGGCTGCCC GCGCGCGC CCAAGCCCTG chr19:4400561-4400641 37 5.58e-05 cccggccccc gcgcgcgc ccccggcccc chr19:38397307-38397387 42 5.58e-05 gcgagaacgc gcgcgcgc TCTCGAAAGA chr15:99191713-99191793 37 5.58e-05 cagggcgcgc gcgcgcgc gcgagcCCCC chr15:76135556-76135636 73 5.58e-05 gggcggccgg gcgcgcgc chr18:5296157-5296237 71 5.58e-05 GCCTgcgcac gcgcgcgc ac chr21:44395085-44395165 24 5.58e-05 CCTGATCGAA GCGCGCGC TCCTAACCGT chr5:176560654-176560734 22 5.58e-05 GGGAAGGGGT GCGCGCGC ACTcggggcc chr1:234745973-234746053 27 5.58e-05 gccctcccgc gcgcgcgc tccccctccc chr5:88179057-88179137 40 5.58e-05 ccgcgcattc gcgcgcgc CGAGGCCGCT chr6:79786835-79786915 30 5.58e-05 ccgcacggac gcgcgcgc cggccccTCC chr12:52345344-52345424 14 5.58e-05 cccTTcgggg gcgcgcgc ggcggccgcg chr7:116593793-116593873 36 5.58e-05 ccgcggccag gcgcgcgc tcggggacgc chr19:11071604-11071684 37 5.58e-05 gccggcgagc gcgcgcgc agcgggggcg chr17:48423472-48423552 2 5.58e-05 G GCGCGCGC CCCGCGTCCC chr7:130790679-130790759 38 5.58e-05 gcggcggcgg gcgcgcgc gggggcggca chr17:64298558-64298638 41 5.58e-05 ccgcaccccc gcgcgcgc ccggcccgcg chr1:40367569-40367649 38 5.58e-05 cgcccccccc gcgcgcgc gcccTCCCTC chr17:44344228-44344308 30 5.58e-05 GCCCCGAGAC GCGCGCGC TCACGGGCCC chr10:98592271-98592351 41 5.58e-05 CGGAGTGTGA GCGCGCGC GACCTCCAGG chr15:32162968-32163048 9 5.58e-05 gcctccgg gcgcgcgc cctcctctga chr1:9884145-9884225 33 5.58e-05 agcggaggga gcgcgcgc ggcggACCCG chr6:69345058-69345138 25 5.58e-05 cacccgggac gcgcgcgc acacgagcac chr19:35759327-35759407 40 5.58e-05 acagaccagc gcgcgcgc cccgggccgc chr17:65989789-65989869 4 5.58e-05 tga gcgcgcgc gtcgcggggc chr9:127020150-127020230 50 1.11e-04 ggggaggggc gggcgcgc gggcgcgcgg chr19:13094530-13094610 38 1.11e-04 GGCCAGCAGG GGGCGCGC GGCAGTAGCC chr1:67395843-67395923 71 1.11e-04 GGGGTGTGGT GGGCGCGC TC chr10:105726806-10572688 57 1.11e-04 gtgaccgggc gggcgcgc agccgggaaa chr2:10091574-10091654 13 1.11e-04 GCCGCGAGTC GGGCGCGC AGCCCCGGGA chr7:150756605-150756685 65 1.11e-04 GTgcgccggg gggcgcgc acgcaggg chr4:6717789-6717869 61 1.50e-04 gcaaaggcgt gagcgcgc gtgcgtgcgt chr17:73179124-73179204 18 1.50e-04 CGCCTCGCGG GAGCGCGC AACGCTTACA chr6:88118242-88118322 23 1.50e-04 CACAGATCCG GAGCGCGC ACACAGATCC chr9:101558842-101558922 56 1.50e-04 TGTGTGCCGG GAGCGCGC CGGGGCTAGG chr17:56833111-56833191 1 2.63e-04 . GCGCGCCC GCCACCAACT chr2:61404386-61404466 62 2.63e-04 gcccctcccc gcccgcgc gtccccgcgt chr1:2457651-2457731 57 2.63e-04 GTCGCCCCGA GCCCGCGC ATCAGCGACC chr18:5296366-5296446 25 2.63e-04 GTGGGCTTcc gcccgcgc ccggcgccgg chr1:247095504-247095584 59 2.63e-04 ggccccggcg gcgcgccc cgTGCGCAGT chr8:74659162-74659242 25 2.63e-04 cgctcgcgcc gcgcgccc ccgcctgcgc chr7:98741748-98741828 26 2.63e-04 gcccggccct gcgcgccc ccgcgcctgc chr22:31741909-31741989 62 3.58e-04 GCCAAGAAGG GCACGCGC ACGCGGGGAG chr3:170075204-170075284 34 3.58e-04 AGGCCAGACG GCACGCGC GTCCACGAGG chr16:28303628-28303708 61 3.58e-04 GCGCTCCGCg gcgcgcgg cgggagggcg chr8:61591142-61591222 59 3.58e-04 TCAGGTGgcg gcgcgcgg gcgcgggcgc chr18:5295240-5295320 59 3.58e-04 ggcgggggcg gcgcgcgg ccggcTAACC chr3:38847432-38847512 3 3.97e-04 GT GCGTGCGC TATCCATGGT chr15:75287783-75287863 72 4.52e-04 CAGTGGCGGC GCGGGCGC G chr18:903782-903862 38 5.63e-04 CAGCTCCGCA GGCCGCGC TCCGGAGGCA chr7:156931670-156931750 28 5.63e-04 GCTGCCCGCT GGGCGCCC CTGCAGCGGC chr19:48673819-48673899 65 6.43e-04 AGAGGCGGGA GACCGCGC GGGGCATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:220094087-220094167 5.6e-05 8_[+3]_64 chr16:70473210-70473290 5.6e-05 47_[+3]_25 chr5:174905487-174905567 5.6e-05 30_[+3]_42 chr16:11890888-11890968 5.6e-05 46_[+3]_26 chr1:1822538-1822618 5.6e-05 42_[+3]_30 chr14:105780850-10578093 5.6e-05 71_[+3]_1 chr17:35766928-35767008 5.6e-05 63_[+3]_9 chr9:115096083-115096163 5.6e-05 58_[+3]_14 chr5:473096-473176 5.6e-05 72_[+3] chr17:42277215-42277295 5.6e-05 45_[+3]_27 chr11:925811-925891 5.6e-05 40_[+3]_32 chr19:48901968-48902048 5.6e-05 43_[+3]_29 chr2:181845192-181845272 5.6e-05 62_[+3]_10 chr21:46238027-46238107 5.6e-05 53_[+3]_19 chr1:226297770-226297850 5.6e-05 52_[+3]_20 chr19:4400561-4400641 5.6e-05 36_[+3]_36 chr19:38397307-38397387 5.6e-05 41_[+3]_31 chr15:99191713-99191793 5.6e-05 36_[+3]_36 chr15:76135556-76135636 5.6e-05 72_[+3] chr18:5296157-5296237 5.6e-05 70_[+3]_2 chr21:44395085-44395165 5.6e-05 23_[+3]_49 chr5:176560654-176560734 5.6e-05 21_[+3]_51 chr1:234745973-234746053 5.6e-05 26_[+3]_46 chr5:88179057-88179137 5.6e-05 39_[+3]_33 chr6:79786835-79786915 5.6e-05 29_[+3]_43 chr12:52345344-52345424 5.6e-05 13_[+3]_59 chr7:116593793-116593873 5.6e-05 35_[+3]_37 chr19:11071604-11071684 5.6e-05 36_[+3]_36 chr17:48423472-48423552 5.6e-05 1_[+3]_71 chr7:130790679-130790759 5.6e-05 37_[+3]_35 chr17:64298558-64298638 5.6e-05 40_[+3]_32 chr1:40367569-40367649 5.6e-05 37_[+3]_35 chr17:44344228-44344308 5.6e-05 29_[+3]_43 chr10:98592271-98592351 5.6e-05 40_[+3]_32 chr15:32162968-32163048 5.6e-05 8_[+3]_64 chr1:9884145-9884225 5.6e-05 32_[+3]_40 chr6:69345058-69345138 5.6e-05 24_[+3]_48 chr19:35759327-35759407 5.6e-05 39_[+3]_33 chr17:65989789-65989869 5.6e-05 3_[+3]_69 chr9:127020150-127020230 0.00011 49_[+3]_23 chr19:13094530-13094610 0.00011 37_[+3]_35 chr1:67395843-67395923 0.00011 70_[+3]_2 chr10:105726806-10572688 0.00011 56_[+3]_16 chr2:10091574-10091654 0.00011 12_[+3]_60 chr7:150756605-150756685 0.00011 64_[+3]_8 chr4:6717789-6717869 0.00015 60_[+3]_12 chr17:73179124-73179204 0.00015 17_[+3]_55 chr6:88118242-88118322 0.00015 22_[+3]_50 chr9:101558842-101558922 0.00015 55_[+3]_17 chr17:56833111-56833191 0.00026 [+3]_72 chr2:61404386-61404466 0.00026 61_[+3]_11 chr1:2457651-2457731 0.00026 56_[+3]_16 chr18:5296366-5296446 0.00026 24_[+3]_48 chr1:247095504-247095584 0.00026 58_[+3]_14 chr8:74659162-74659242 0.00026 24_[+3]_48 chr7:98741748-98741828 0.00026 25_[+3]_47 chr22:31741909-31741989 0.00036 61_[+3]_11 chr3:170075204-170075284 0.00036 33_[+3]_39 chr16:28303628-28303708 0.00036 60_[+3]_12 chr8:61591142-61591222 0.00036 58_[+3]_14 chr18:5295240-5295320 0.00036 58_[+3]_14 chr3:38847432-38847512 0.0004 2_[+3]_70 chr15:75287783-75287863 0.00045 71_[+3]_1 chr18:903782-903862 0.00056 37_[+3]_35 chr7:156931670-156931750 0.00056 27_[+3]_45 chr19:48673819-48673899 0.00064 64_[+3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCGCGCGC width=8 seqs=66 chr2:220094087-220094167 ( 9) GCGCGCGC 1 chr16:70473210-70473290 ( 48) GCGCGCGC 1 chr5:174905487-174905567 ( 31) GCGCGCGC 1 chr16:11890888-11890968 ( 47) GCGCGCGC 1 chr1:1822538-1822618 ( 43) GCGCGCGC 1 chr14:105780850-10578093 ( 72) GCGCGCGC 1 chr17:35766928-35767008 ( 64) GCGCGCGC 1 chr9:115096083-115096163 ( 59) GCGCGCGC 1 chr5:473096-473176 ( 73) GCGCGCGC 1 chr17:42277215-42277295 ( 46) GCGCGCGC 1 chr11:925811-925891 ( 41) GCGCGCGC 1 chr19:48901968-48902048 ( 44) GCGCGCGC 1 chr2:181845192-181845272 ( 63) GCGCGCGC 1 chr21:46238027-46238107 ( 54) GCGCGCGC 1 chr1:226297770-226297850 ( 53) GCGCGCGC 1 chr19:4400561-4400641 ( 37) GCGCGCGC 1 chr19:38397307-38397387 ( 42) GCGCGCGC 1 chr15:99191713-99191793 ( 37) GCGCGCGC 1 chr15:76135556-76135636 ( 73) GCGCGCGC 1 chr18:5296157-5296237 ( 71) GCGCGCGC 1 chr21:44395085-44395165 ( 24) GCGCGCGC 1 chr5:176560654-176560734 ( 22) GCGCGCGC 1 chr1:234745973-234746053 ( 27) GCGCGCGC 1 chr5:88179057-88179137 ( 40) GCGCGCGC 1 chr6:79786835-79786915 ( 30) GCGCGCGC 1 chr12:52345344-52345424 ( 14) GCGCGCGC 1 chr7:116593793-116593873 ( 36) GCGCGCGC 1 chr19:11071604-11071684 ( 37) GCGCGCGC 1 chr17:48423472-48423552 ( 2) GCGCGCGC 1 chr7:130790679-130790759 ( 38) GCGCGCGC 1 chr17:64298558-64298638 ( 41) GCGCGCGC 1 chr1:40367569-40367649 ( 38) GCGCGCGC 1 chr17:44344228-44344308 ( 30) GCGCGCGC 1 chr10:98592271-98592351 ( 41) GCGCGCGC 1 chr15:32162968-32163048 ( 9) GCGCGCGC 1 chr1:9884145-9884225 ( 33) GCGCGCGC 1 chr6:69345058-69345138 ( 25) GCGCGCGC 1 chr19:35759327-35759407 ( 40) GCGCGCGC 1 chr17:65989789-65989869 ( 4) GCGCGCGC 1 chr9:127020150-127020230 ( 50) GGGCGCGC 1 chr19:13094530-13094610 ( 38) GGGCGCGC 1 chr1:67395843-67395923 ( 71) GGGCGCGC 1 chr10:105726806-10572688 ( 57) GGGCGCGC 1 chr2:10091574-10091654 ( 13) GGGCGCGC 1 chr7:150756605-150756685 ( 65) GGGCGCGC 1 chr4:6717789-6717869 ( 61) GAGCGCGC 1 chr17:73179124-73179204 ( 18) GAGCGCGC 1 chr6:88118242-88118322 ( 23) GAGCGCGC 1 chr9:101558842-101558922 ( 56) GAGCGCGC 1 chr17:56833111-56833191 ( 1) GCGCGCCC 1 chr2:61404386-61404466 ( 62) GCCCGCGC 1 chr1:2457651-2457731 ( 57) GCCCGCGC 1 chr18:5296366-5296446 ( 25) GCCCGCGC 1 chr1:247095504-247095584 ( 59) GCGCGCCC 1 chr8:74659162-74659242 ( 25) GCGCGCCC 1 chr7:98741748-98741828 ( 26) GCGCGCCC 1 chr22:31741909-31741989 ( 62) GCACGCGC 1 chr3:170075204-170075284 ( 34) GCACGCGC 1 chr16:28303628-28303708 ( 61) GCGCGCGG 1 chr8:61591142-61591222 ( 59) GCGCGCGG 1 chr18:5295240-5295320 ( 59) GCGCGCGG 1 chr3:38847432-38847512 ( 3) GCGTGCGC 1 chr15:75287783-75287863 ( 72) GCGGGCGC 1 chr18:903782-903862 ( 38) GGCCGCGC 1 chr7:156931670-156931750 ( 28) GGGCGCCC 1 chr19:48673819-48673899 ( 65) GACCGCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.87455 E= 1.2e-031 -1269 -1269 178 -1269 -145 144 -127 -1269 -277 -196 161 -1269 -1269 171 -426 -375 -1269 -1269 178 -1269 -1269 176 -1269 -1269 -1269 -196 166 -1269 -1269 169 -268 -1269 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 66 E= 1.2e-031 0.000000 0.000000 1.000000 0.000000 0.075758 0.803030 0.121212 0.000000 0.030303 0.075758 0.893939 0.000000 0.000000 0.969697 0.015152 0.015152 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.075758 0.924242 0.000000 0.000000 0.954545 0.045455 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCGCGC MEME-3 regular expression -------------------------------------------------------------------------------- GCGCGCGC -------------------------------------------------------------------------------- Time 12.04 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCTGGTT MEME-4 width = 8 sites = 33 llr = 310 E-value = 2.3e-017 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::1::: pos.-specific C 9:8:::11 probability G ::1:9a:: matrix T :a1a::99 bits 2.3 2.1 * * 1.8 * * *** 1.6 * * *** Relative 1.4 ** ***** Entropy 1.1 ** ***** (13.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTCTGGTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:158176290-158176370 30 1.32e-05 gatggagttg ctctggtt cgcatgcctc chr8:125461724-125461804 24 1.32e-05 gatggagtca ctctggtt tggactcctc chr3:99495987-99496067 40 1.32e-05 gatggagttg ctctggtt tgaatgcctt chr16:1344208-1344288 50 1.32e-05 gatggagttg ctctggtt cacacgcctc chr17:40687503-40687583 18 1.32e-05 gatggagtcg ctctggtt ggaaacttct chr16:17176422-17176502 43 1.32e-05 gatggagtca ctctggtt agagcacctc chr4:74962372-74962452 47 1.32e-05 gatggagttg ctctggtt aaaacgtctc chr3:44482948-44483028 50 1.32e-05 gatggagtca ctctggtt caaacgcctc chr12:131847301-13184738 36 1.32e-05 gatggagtca ctctggtt caaacgtctc chr14:103000325-10300040 33 1.32e-05 gatggagttg ctctggtt cacacaactc chr17:46903268-46903348 49 1.32e-05 gatggagtca ctctggtt caaacacctc chr20:39577460-39577540 40 1.32e-05 gatggagttg ctctggtt caaatgcctc chr15:68193167-68193247 43 1.32e-05 gatggagttg ctctggtt ccagtgcttc chr4:154458940-154459020 28 1.32e-05 gatggagttg ctctggtt caaaagcctc chr20:46768480-46768560 13 1.32e-05 gatggagttg ctctggtt caagtgcctc chr9:110438248-110438328 12 1.32e-05 gatggagtca ctctggtt caaacgcctc chr7:123633166-123633246 26 1.32e-05 gatggagtca ctctggtt ccaatgcttc chr1:223920397-223920477 36 2.26e-05 gatggagttg ctctagtt cacacgcctc chr16:46977447-46977527 31 2.26e-05 gatggagtca ctctagtt tgaactcccc chr8:94886445-94886525 9 2.26e-05 tggagtca ctctagtt cagatgcctc chr17:41430106-41430186 28 3.17e-05 aatggagtcg ctttggtt caaatgcctc chr3:14639919-14639999 61 3.17e-05 ACTTCAAAGC CTTTGGTT AACTACGTTG chr10:26051021-26051101 31 4.47e-05 gatggagttg ctgtggtt catacacctc chr10:45906823-45906903 31 4.47e-05 gatggagttg ctgtggtt caaacacctc chr5:90587985-90588065 6 5.40e-05 agttg ctatggtt taaacgcctc chr12:132090107-13209018 53 6.32e-05 gatggagtca ttctggtt caaatgcctc chr1:2457651-2457731 6 1.01e-04 CCCCG CTCTGGTC CCTGCGGCGC chr15:45876413-45876493 27 1.01e-04 gatggagttg ctctggct caaatgcctc chr8:10847832-10847912 28 1.01e-04 GAAAAGCCTG CTCTGGTC CCAAAGGGAG chr1:10754790-10754870 34 1.01e-04 TTCCCCAAAC CTCTGGCT CCGGGAGGAG chr2:128685144-128685224 59 1.14e-04 gtctactggg gtctggtt cagaagctca chr12:127393006-12739308 52 1.41e-04 gatggagtgg cactggtt caaacacctc chr12:127388126-12738820 21 1.41e-04 gatggagttg ctcaggtt caaatgtctt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:158176290-158176370 1.3e-05 29_[+4]_43 chr8:125461724-125461804 1.3e-05 23_[+4]_49 chr3:99495987-99496067 1.3e-05 39_[+4]_33 chr16:1344208-1344288 1.3e-05 49_[+4]_23 chr17:40687503-40687583 1.3e-05 17_[+4]_55 chr16:17176422-17176502 1.3e-05 42_[+4]_30 chr4:74962372-74962452 1.3e-05 46_[+4]_26 chr3:44482948-44483028 1.3e-05 49_[+4]_23 chr12:131847301-13184738 1.3e-05 35_[+4]_37 chr14:103000325-10300040 1.3e-05 32_[+4]_40 chr17:46903268-46903348 1.3e-05 48_[+4]_24 chr20:39577460-39577540 1.3e-05 39_[+4]_33 chr15:68193167-68193247 1.3e-05 42_[+4]_30 chr4:154458940-154459020 1.3e-05 27_[+4]_45 chr20:46768480-46768560 1.3e-05 12_[+4]_60 chr9:110438248-110438328 1.3e-05 11_[+4]_61 chr7:123633166-123633246 1.3e-05 25_[+4]_47 chr1:223920397-223920477 2.3e-05 35_[+4]_37 chr16:46977447-46977527 2.3e-05 30_[+4]_42 chr8:94886445-94886525 2.3e-05 8_[+4]_64 chr17:41430106-41430186 3.2e-05 27_[+4]_45 chr3:14639919-14639999 3.2e-05 60_[+4]_12 chr10:26051021-26051101 4.5e-05 30_[+4]_42 chr10:45906823-45906903 4.5e-05 30_[+4]_42 chr5:90587985-90588065 5.4e-05 5_[+4]_67 chr12:132090107-13209018 6.3e-05 52_[+4]_20 chr1:2457651-2457731 0.0001 5_[+4]_67 chr15:45876413-45876493 0.0001 26_[+4]_46 chr8:10847832-10847912 0.0001 27_[+4]_45 chr1:10754790-10754870 0.0001 33_[+4]_39 chr2:128685144-128685224 0.00011 58_[+4]_14 chr12:127393006-12739308 0.00014 51_[+4]_21 chr12:127388126-12738820 0.00014 20_[+4]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCTGGTT width=8 seqs=33 chr6:158176290-158176370 ( 30) CTCTGGTT 1 chr8:125461724-125461804 ( 24) CTCTGGTT 1 chr3:99495987-99496067 ( 40) CTCTGGTT 1 chr16:1344208-1344288 ( 50) CTCTGGTT 1 chr17:40687503-40687583 ( 18) CTCTGGTT 1 chr16:17176422-17176502 ( 43) CTCTGGTT 1 chr4:74962372-74962452 ( 47) CTCTGGTT 1 chr3:44482948-44483028 ( 50) CTCTGGTT 1 chr12:131847301-13184738 ( 36) CTCTGGTT 1 chr14:103000325-10300040 ( 33) CTCTGGTT 1 chr17:46903268-46903348 ( 49) CTCTGGTT 1 chr20:39577460-39577540 ( 40) CTCTGGTT 1 chr15:68193167-68193247 ( 43) CTCTGGTT 1 chr4:154458940-154459020 ( 28) CTCTGGTT 1 chr20:46768480-46768560 ( 13) CTCTGGTT 1 chr9:110438248-110438328 ( 12) CTCTGGTT 1 chr7:123633166-123633246 ( 26) CTCTGGTT 1 chr1:223920397-223920477 ( 36) CTCTAGTT 1 chr16:46977447-46977527 ( 31) CTCTAGTT 1 chr8:94886445-94886525 ( 9) CTCTAGTT 1 chr17:41430106-41430186 ( 28) CTTTGGTT 1 chr3:14639919-14639999 ( 61) CTTTGGTT 1 chr10:26051021-26051101 ( 31) CTGTGGTT 1 chr10:45906823-45906903 ( 31) CTGTGGTT 1 chr5:90587985-90588065 ( 6) CTATGGTT 1 chr12:132090107-13209018 ( 53) TTCTGGTT 1 chr1:2457651-2457731 ( 6) CTCTGGTC 1 chr15:45876413-45876493 ( 27) CTCTGGCT 1 chr8:10847832-10847912 ( 28) CTCTGGTC 1 chr1:10754790-10754870 ( 34) CTCTGGCT 1 chr2:128685144-128685224 ( 59) GTCTGGTT 1 chr12:127393006-12739308 ( 52) CACTGGTT 1 chr12:127388126-12738820 ( 21) CTCAGGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.87609 E= 2.3e-017 -1169 167 -326 -275 -277 -1169 -1169 224 -277 152 -227 -176 -277 -1169 -1169 224 -119 -1169 164 -1169 -1169 -1169 178 -1169 -1169 -229 -1169 220 -1169 -229 -1169 220 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 33 E= 2.3e-017 0.000000 0.939394 0.030303 0.030303 0.030303 0.000000 0.000000 0.969697 0.030303 0.848485 0.060606 0.060606 0.030303 0.000000 0.000000 0.969697 0.090909 0.000000 0.909091 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.060606 0.000000 0.939394 0.000000 0.060606 0.000000 0.939394 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-4 regular expression -------------------------------------------------------------------------------- CTCTGGTT -------------------------------------------------------------------------------- Time 15.46 secs. ******************************************************************************** ******************************************************************************** MOTIF GAACCAGA MEME-5 width = 8 sites = 28 llr = 282 E-value = 4.9e-018 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :aa:1a:9 pos.-specific C :::a9:11 probability G a:::::9: matrix T :::::::: bits 2.3 ** * 2.1 ** * 1.8 *** * * 1.6 **** * * Relative 1.4 **** *** Entropy 1.1 ******** (14.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GAACCAGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:5586023-5586103 23 1.40e-05 atctttcatt gaaccaga gctactccat chr2:97587562-97587642 39 1.40e-05 agaggcgttt gaaccaga gcaactccat chr16:20956277-20956357 33 1.40e-05 agaggcattc gaaccaga gcaactccat chr6:10662516-10662596 34 1.40e-05 agagtcattt gaaccaga gcgactccat chr9:99183124-99183204 21 1.40e-05 agaggcctgt gaaccaga gcaactccat chr9:102064162-102064242 46 1.40e-05 agaggcattt gaaccaga gggactccat chr6:158425158-158425238 37 1.40e-05 agaggcgtat gaaccaga gcgactccat chr3:101362795-101362875 53 1.40e-05 agagctgtta gaaccaga gtgactccat chr2:192464326-192464406 55 1.40e-05 agaggtgttt gaaccaga gcaactccat chr16:12704951-12705031 68 1.40e-05 agagggattt gaaccaga gcaac chr17:77007680-77007760 59 1.40e-05 agaggccttc gaaccaga gcaacaccat chr8:29474737-29474817 33 1.40e-05 agagatgttc gaaccaga gcaactccat chr2:47525078-47525158 34 1.40e-05 agaggcgttt gaaccaga gtgactccat chr6:164758787-164758867 73 1.40e-05 agaggtattt gaaccaga chr14:64830113-64830193 44 1.40e-05 agaggcatta gaaccaga gcaactccat chrX:3619578-3619658 54 1.40e-05 agcggcatct gaaccaga gcaactccat chr15:90325476-90325556 58 1.40e-05 agaggtgttt gaaccaga gcgattccat chr1:223079689-223079769 34 1.40e-05 agaggcgttt gaaccaga gcaactccat chr7:143067412-143067492 56 1.40e-05 agaggcaatt gaaccaga gcaactccat chr7:123139752-123139832 69 1.40e-05 agaggcgtgt gaaccaga gcaa chr1:18748649-18748729 39 2.38e-05 aggggcgttt gaacaaga gtgactccat chr3:38847432-38847512 72 2.38e-05 CCGTGGTACT GAACAAGA G chr12:96476847-96476927 2 3.80e-05 G GAACCACA GGTGTGAGAA chr6:111140835-111140915 39 3.80e-05 tcaggcattt gaaccaca gtgactccat chr1:205744586-205744666 54 5.79e-05 GCGGTAAAGA GAACCAGC CGAGTGCGGA chr7:1922765-1922845 20 5.79e-05 ACAATTCCAG GAACCAGC TCCTTATCAC chr6:158176490-158176570 7 7.77e-05 CATGTG GAACAACA AAGACTACTG chr10:21368166-21368246 11 9.86e-05 GGCAAGACCA GAAAAAGA AAGAAAATGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:5586023-5586103 1.4e-05 22_[+5]_50 chr2:97587562-97587642 1.4e-05 38_[+5]_34 chr16:20956277-20956357 1.4e-05 32_[+5]_40 chr6:10662516-10662596 1.4e-05 33_[+5]_39 chr9:99183124-99183204 1.4e-05 20_[+5]_52 chr9:102064162-102064242 1.4e-05 45_[+5]_27 chr6:158425158-158425238 1.4e-05 36_[+5]_36 chr3:101362795-101362875 1.4e-05 52_[+5]_20 chr2:192464326-192464406 1.4e-05 54_[+5]_18 chr16:12704951-12705031 1.4e-05 67_[+5]_5 chr17:77007680-77007760 1.4e-05 58_[+5]_14 chr8:29474737-29474817 1.4e-05 32_[+5]_40 chr2:47525078-47525158 1.4e-05 33_[+5]_39 chr6:164758787-164758867 1.4e-05 72_[+5] chr14:64830113-64830193 1.4e-05 43_[+5]_29 chrX:3619578-3619658 1.4e-05 53_[+5]_19 chr15:90325476-90325556 1.4e-05 57_[+5]_15 chr1:223079689-223079769 1.4e-05 33_[+5]_39 chr7:143067412-143067492 1.4e-05 55_[+5]_17 chr7:123139752-123139832 1.4e-05 68_[+5]_4 chr1:18748649-18748729 2.4e-05 38_[+5]_34 chr3:38847432-38847512 2.4e-05 71_[+5]_1 chr12:96476847-96476927 3.8e-05 1_[+5]_71 chr6:111140835-111140915 3.8e-05 38_[+5]_34 chr1:205744586-205744666 5.8e-05 53_[+5]_19 chr7:1922765-1922845 5.8e-05 19_[+5]_53 chr6:158176490-158176570 7.8e-05 6_[+5]_66 chr10:21368166-21368246 9.9e-05 10_[+5]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAACCAGA width=8 seqs=28 chr5:5586023-5586103 ( 23) GAACCAGA 1 chr2:97587562-97587642 ( 39) GAACCAGA 1 chr16:20956277-20956357 ( 33) GAACCAGA 1 chr6:10662516-10662596 ( 34) GAACCAGA 1 chr9:99183124-99183204 ( 21) GAACCAGA 1 chr9:102064162-102064242 ( 46) GAACCAGA 1 chr6:158425158-158425238 ( 37) GAACCAGA 1 chr3:101362795-101362875 ( 53) GAACCAGA 1 chr2:192464326-192464406 ( 55) GAACCAGA 1 chr16:12704951-12705031 ( 68) GAACCAGA 1 chr17:77007680-77007760 ( 59) GAACCAGA 1 chr8:29474737-29474817 ( 33) GAACCAGA 1 chr2:47525078-47525158 ( 34) GAACCAGA 1 chr6:164758787-164758867 ( 73) GAACCAGA 1 chr14:64830113-64830193 ( 44) GAACCAGA 1 chrX:3619578-3619658 ( 54) GAACCAGA 1 chr15:90325476-90325556 ( 58) GAACCAGA 1 chr1:223079689-223079769 ( 34) GAACCAGA 1 chr7:143067412-143067492 ( 56) GAACCAGA 1 chr7:123139752-123139832 ( 69) GAACCAGA 1 chr1:18748649-18748729 ( 39) GAACAAGA 1 chr3:38847432-38847512 ( 72) GAACAAGA 1 chr12:96476847-96476927 ( 2) GAACCACA 1 chr6:111140835-111140915 ( 39) GAACCACA 1 chr1:205744586-205744666 ( 54) GAACCAGC 1 chr7:1922765-1922845 ( 20) GAACCAGC 1 chr6:158176490-158176570 ( 7) GAACAACA 1 chr10:21368166-21368246 ( 11) GAAAAAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.18967 E= 4.9e-018 -1145 -1145 178 -1145 227 -1145 -1145 -1145 227 -1145 -1145 -1145 -254 170 -1145 -1145 -54 153 -1145 -1145 227 -1145 -1145 -1145 -1145 -146 161 -1145 216 -205 -1145 -1145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 28 E= 4.9e-018 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.035714 0.964286 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.107143 0.892857 0.000000 0.928571 0.071429 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-5 regular expression -------------------------------------------------------------------------------- GAACCAGA -------------------------------------------------------------------------------- Time 18.80 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:5295240-5295320 5.46e-01 80 chr17:65989789-65989869 3.08e-01 3_[+3(5.58e-05)]_69 chr19:35759327-35759407 8.10e-02 5_[+3(5.58e-05)]_24_[+3(5.58e-05)]_\ 35 chr6:69345058-69345138 1.49e-01 24_[+3(5.58e-05)]_48 chr1:9884145-9884225 2.49e-01 32_[+3(5.58e-05)]_17_[+3(5.58e-05)]_\ 15 chr7:150756605-150756685 4.21e-01 80 chr9:101558842-101558922 4.71e-01 80 chr1:10754790-10754870 1.22e-01 80 chr9:128845127-128845207 4.71e-01 80 chr1:23999719-23999799 3.11e-02 80 chr9:95640004-95640084 7.62e-01 80 chr15:32162968-32163048 2.56e-01 8_[+3(5.58e-05)]_55_[+3(5.58e-05)]_\ 1 chr10:98592271-98592351 3.09e-01 40_[+3(5.58e-05)]_32 chr2:10091574-10091654 3.12e-01 80 chr7:123633166-123633246 7.27e-04 13_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 47 chr17:44344228-44344308 2.41e-01 29_[+3(5.58e-05)]_32_[+3(5.58e-05)]_\ 3 chr1:40367569-40367649 2.07e-01 37_[+3(5.58e-05)]_35 chr17:64298558-64298638 2.78e-01 40_[+3(5.58e-05)]_32 chr8:142726256-142726336 1.62e-01 80 chr7:130790679-130790759 3.34e-02 37_[+3(5.58e-05)]_35 chr17:48423472-48423552 5.19e-03 1_[+3(5.58e-05)]_17_[+1(4.62e-05)]_\ 46 chr20:10415802-10415882 4.43e-02 28_[+2(3.91e-05)]_44 chr1:169862851-169862931 5.40e-01 80 chr7:98741748-98741828 5.51e-01 80 chr19:11071604-11071684 1.74e-01 34_[+3(5.58e-05)]_38 chr19:7627865-7627945 6.60e-01 80 chr6:147788748-147788828 1.30e-01 56_[+2(1.61e-05)]_16 chr2:11262783-11262863 7.22e-01 80 chr7:116593793-116593873 9.04e-02 35_[+3(5.58e-05)]_37 chr10:105726806-10572688 2.05e-01 80 chr10:124671768-12467184 5.96e-01 80 chr10:124671568-12467164 5.67e-01 80 chr12:52345344-52345424 2.83e-01 13_[+3(5.58e-05)]_59 chr3:128444428-128444508 2.49e-01 80 chr16:71501810-71501890 1.54e-01 80 chr20:36255546-36255626 6.33e-01 80 chr1:146849419-146849499 5.48e-01 80 chr6:79786835-79786915 6.20e-02 29_[+3(5.58e-05)]_43 chr5:88179057-88179137 1.11e-01 3_[+3(5.58e-05)]_28_[+3(5.58e-05)]_\ 33 chr5:151304259-151304339 6.44e-01 80 chr8:74659162-74659242 5.25e-01 80 chr1:159147229-159147309 2.10e-01 80 chr1:234745973-234746053 2.39e-01 24_[+3(5.58e-05)]_48 chr11:221060-221140 8.13e-01 80 chr2:205335076-205335156 1.06e-01 80 chr5:176560654-176560734 2.30e-01 21_[+3(5.58e-05)]_51 chr8:142402135-142402215 7.36e-01 80 chr9:110438248-110438328 6.88e-03 11_[+4(1.32e-05)]_61 chr19:37663671-37663751 3.66e-02 80 chr8:61591142-61591222 2.74e-01 80 chr12:117296007-11729608 4.79e-01 80 chr8:74884998-74885078 3.65e-01 80 chr9:115818988-115819068 4.02e-02 58_[+2(3.91e-05)]_14 chr8:10847832-10847912 2.84e-03 80 chr21:44395085-44395165 1.99e-01 23_[+3(5.58e-05)]_25_[+3(5.58e-05)]_\ 16 chr2:102875170-102875250 8.97e-01 80 chr19:55195886-55195966 1.34e-01 80 chr18:5296157-5296237 9.86e-02 70_[+3(5.58e-05)]_2 chr3:12920899-12920979 8.74e-03 80 chr16:28303628-28303708 5.07e-02 80 chr15:76135556-76135636 1.42e-02 72_[+3(5.58e-05)] chr15:99191713-99191793 2.13e-01 30_[+3(5.58e-05)]_[+3(5.58e-05)]_34 chr9:126872734-126872814 7.51e-01 80 chr1:35390565-35390645 9.85e-01 80 chr19:38397307-38397387 9.81e-02 18_[+3(5.58e-05)]_13_[+3(5.58e-05)]_\ 33 chr8:145560346-145560426 9.76e-01 80 chr19:48866436-48866516 8.68e-01 80 chr20:46768480-46768560 3.14e-04 [+1(9.55e-06)]_4_[+4(1.32e-05)]_60 chr20:35012574-35012654 7.79e-02 45_[+1(3.68e-05)]_27 chr7:123139752-123139832 6.25e-02 68_[+5(1.40e-05)]_4 chr6:151550341-151550421 4.94e-01 80 chr15:60314163-60314243 6.51e-02 5_[+1(4.62e-05)]_67 chr22:22139160-22139240 7.22e-01 80 chr4:154458940-154459020 5.50e-05 15_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 45 chr11:20000275-20000355 9.57e-01 80 chr19:4400561-4400641 3.35e-01 17_[+3(5.58e-05)]_11_[+3(5.58e-05)]_\ 36 chr19:54020423-54020503 1.13e-01 80 chr3:14639919-14639999 1.38e-01 60_[+4(3.17e-05)]_12 chr1:226297770-226297850 2.08e-01 52_[+3(5.58e-05)]_20 chr3:38847432-38847512 1.59e-04 71_[+5(2.38e-05)]_1 chr7:143067412-143067492 7.41e-04 55_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 4 chr1:236732098-236732178 3.68e-01 80 chr21:46238027-46238107 2.26e-01 53_[+3(5.58e-05)]_19 chr19:45988712-45988792 2.87e-01 80 chr15:68193167-68193247 1.21e-04 30_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 30 chr18:3012840-3012920 9.32e-01 80 chr7:5497240-5497320 5.99e-01 80 chr2:181845192-181845272 1.23e-01 62_[+3(5.58e-05)]_10 chr8:94886445-94886525 4.63e-02 8_[+4(2.26e-05)]_64 chr1:26376542-26376622 1.30e-01 24_[+2(1.61e-05)]_48 chr19:49148185-49148265 8.12e-01 80 chr12:124227713-12422779 1.85e-01 44_[+2(6.21e-05)]_28 chr1:18748649-18748729 8.11e-05 38_[+5(2.38e-05)]_5_[+2(9.53e-06)]_\ 21 chr7:1922765-1922845 2.28e-01 19_[+5(5.79e-05)]_53 chr19:48901968-48902048 8.32e-02 43_[+3(5.58e-05)]_29 chr1:205744586-205744666 2.66e-02 53_[+5(5.79e-05)]_19 chr14:36004559-36004639 9.43e-01 80 chr20:39577460-39577540 5.35e-04 27_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 33 chr20:36170934-36171014 5.42e-01 80 chr1:206890766-206890846 8.92e-02 80 chr1:204829229-204829309 6.53e-01 80 chr17:46903473-46903553 9.23e-01 80 chr11:925811-925891 1.27e-01 40_[+3(5.58e-05)]_32 chr6:88118242-88118322 3.21e-01 80 chr1:223079689-223079769 1.47e-05 3_[+1(5.96e-05)]_22_[+5(1.40e-05)]_\ 5_[+2(9.53e-06)]_26 chr7:106619688-106619768 4.51e-01 80 chr18:34850157-34850237 9.69e-02 80 chr3:170075204-170075284 1.33e-01 80 chr12:6722268-6722348 3.61e-01 80 chr17:42277215-42277295 2.44e-02 45_[+3(5.58e-05)]_27 chr1:247531166-247531246 3.34e-05 56_[+5(2.38e-05)]_5_[+2(9.53e-06)]_\ 3 chr1:59762285-59762365 5.26e-01 80 chr12:127388126-12738820 2.54e-03 8_[+1(9.55e-06)]_64 chr2:175499073-175499153 5.32e-01 80 chr15:90325476-90325556 4.12e-04 57_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 2 chr5:473096-473176 6.20e-02 72_[+3(5.58e-05)] chr10:21368166-21368246 5.33e-03 10_[+5(9.86e-05)]_62 chrX:3619578-3619658 2.15e-04 53_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 6 chr17:46903268-46903348 1.12e-04 36_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 24 chr9:101613898-101613978 1.31e-01 80 chr7:126747846-126747926 7.12e-01 80 chr1:207799019-207799099 3.15e-01 80 chr12:31771253-31771333 1.64e-02 4_[+1(1.64e-05)]_68 chr22:31741909-31741989 3.85e-01 80 chr14:64830113-64830193 1.07e-03 43_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 16 chr6:147770814-147770894 5.21e-01 80 chr11:70496581-70496661 3.29e-01 80 chr15:45876413-45876493 4.30e-03 14_[+1(9.55e-06)]_58 chr11:63302427-63302507 5.87e-02 28_[+1(1.64e-05)]_44 chr9:115096083-115096163 1.20e-01 54_[+3(5.58e-05)]_18 chr6:164758787-164758867 4.67e-02 72_[+5(1.40e-05)] chr9:99445933-99446013 4.57e-02 45_[+2(1.61e-05)]_27 chr19:48673819-48673899 3.84e-01 80 chr17:35766928-35767008 3.04e-01 63_[+3(5.58e-05)]_9 chr10:3933013-3933093 1.89e-02 35_[+2(9.53e-06)]_37 chr11:68034836-68034916 4.78e-01 80 chr19:52511490-52511570 3.70e-04 3_[+1(3.00e-05)]_32_[+2(3.91e-05)]_\ 29 chr14:103000325-10300040 7.17e-04 20_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 40 chr15:75287783-75287863 4.00e-01 80 chr2:205219416-205219496 3.72e-02 15_[+1(9.55e-06)]_57 chr1:247095504-247095584 3.88e-01 80 chr19:4342885-4342965 1.41e-01 80 chr6:69942929-69943009 4.38e-01 80 chr19:52490136-52490216 1.54e-02 54_[+1(9.26e-05)]_18 chr5:90587985-90588065 1.49e-01 5_[+4(5.40e-05)]_67 chr2:47525078-47525158 5.59e-05 33_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 26 chrX:15901595-15901675 9.70e-01 80 chr18:3013114-3013194 6.78e-01 80 chr1:110365181-110365261 2.05e-02 70_[+2(1.61e-05)]_2 chr12:131847301-13184738 2.56e-05 23_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 37 chr6:157801107-157801187 6.07e-02 80 chr3:57741808-57741888 1.13e-02 56_[+1(3.00e-05)]_16 chr6:30805766-30805846 1.45e-02 22_[+1(6.93e-05)]_50 chr8:29474737-29474817 2.43e-04 32_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 27 chr6:37051707-37051787 4.51e-01 80 chr17:77007680-77007760 1.16e-03 58_[+5(1.40e-05)]_14 chr12:132090107-13209018 1.21e-03 40_[+1(9.55e-06)]_4_[+4(6.32e-05)]_\ 20 chr3:156338141-156338221 3.37e-01 80 chr20:62694374-62694454 2.03e-01 80 chr2:152237303-152237383 1.09e-02 40_[+2(1.61e-05)]_32 chr15:76135755-76135835 7.81e-01 80 chr1:198048682-198048762 1.35e-01 43_[+2(2.55e-05)]_29 chr14:105780850-10578093 2.55e-01 49_[+3(5.58e-05)]_14_[+3(5.58e-05)]_\ 1 chr16:12704951-12705031 2.94e-02 67_[+5(1.40e-05)]_5 chr8:94886649-94886729 5.26e-01 80 chr16:30103718-30103798 7.83e-01 80 chr17:73179124-73179204 1.92e-01 80 chr10:44144331-44144411 7.29e-01 80 chr3:44482948-44483028 6.19e-04 37_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 23 chr2:192464326-192464406 5.02e-04 54_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 5 chr1:67395843-67395923 1.73e-01 80 chr18:5296366-5296446 4.13e-02 80 chr4:74962372-74962452 3.39e-05 34_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 26 chr15:37393427-37393507 8.08e-01 80 chr20:30556359-30556439 2.74e-01 80 chr1:2457651-2457731 3.41e-02 80 chr16:88627273-88627353 7.86e-01 80 chr1:1822538-1822618 2.03e-01 42_[+3(5.58e-05)]_30 chr12:55413725-55413805 5.38e-01 80 chr6:16214828-16214908 5.26e-01 80 chr12:6717096-6717176 8.88e-01 80 chr3:101362795-101362875 2.50e-04 52_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 7 chr8:101514061-101514141 5.16e-02 64_[+2(9.53e-06)]_8 chr2:201991164-201991244 7.09e-04 30_[+1(9.55e-06)]_42 chr7:30711622-30711702 2.04e-01 80 chr2:128685144-128685224 5.27e-03 34_[+2(1.61e-05)]_38 chr19:1407370-1407450 6.66e-02 80 chr7:150659744-150659824 2.18e-01 80 chr8:131045149-131045229 4.78e-01 80 chr6:111140835-111140915 2.84e-05 12_[+1(3.68e-05)]_18_[+5(3.80e-05)]_\ 5_[+2(9.53e-06)]_21 chr1:212651646-212651726 2.34e-02 37_[+2(1.61e-05)]_35 chr16:23160815-23160895 2.74e-02 80 chr6:158425158-158425238 1.98e-04 36_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 23 chr19:13094530-13094610 1.12e-01 80 chr16:46977447-46977527 9.24e-04 18_[+1(9.55e-06)]_4_[+4(2.26e-05)]_\ 42 chr16:17176422-17176502 7.79e-06 30_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 30 chr5:176264780-176264860 8.83e-01 80 chr16:11890888-11890968 1.01e-01 19_[+3(5.58e-05)]_19_[+3(5.58e-05)]_\ 26 chr5:174905487-174905567 2.86e-01 30_[+3(5.58e-05)]_42 chr17:41430106-41430186 1.20e-03 15_[+1(1.64e-05)]_4_[+4(3.17e-05)]_\ 45 chr9:102064162-102064242 2.72e-04 45_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 14 chr17:40687503-40687583 7.27e-04 5_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 55 chr2:42064244-42064324 6.14e-01 80 chr1:223920397-223920477 9.39e-04 23_[+1(9.55e-06)]_4_[+4(2.26e-05)]_\ 37 chr4:6717789-6717869 3.72e-03 7_[+1(5.96e-05)]_65 chr6:158176490-158176570 1.16e-01 6_[+5(7.77e-05)]_66 chr11:86648343-86648423 4.78e-01 80 chr5:176560895-176560975 5.66e-01 80 chr16:1344208-1344288 2.86e-04 37_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 23 chr7:156931670-156931750 2.39e-01 80 chr3:99495987-99496067 1.32e-04 27_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 33 chr2:152237509-152237589 6.15e-01 80 chr1:249120375-249120455 3.23e-02 61_[+2(3.91e-05)]_11 chr16:70473210-70473290 4.10e-02 47_[+3(5.58e-05)]_25 chr12:127393006-12739308 9.54e-04 39_[+1(9.55e-06)]_33 chr11:74952808-74952888 7.22e-01 80 chr12:88535953-88536033 4.04e-01 80 chr11:97844204-97844284 1.14e-01 53_[+2(2.55e-05)]_19 chr9:127020150-127020230 3.63e-01 80 chr12:96476847-96476927 6.87e-02 1_[+5(3.80e-05)]_7_[+5(7.77e-05)]_\ 56 chr18:903782-903862 3.28e-01 80 chr6:43215017-43215097 6.14e-02 80 chr16:84457185-84457265 1.21e-01 80 chr10:94608262-94608342 1.02e-01 25_[+1(9.26e-05)]_47 chr21:38939245-38939325 3.11e-02 80 chr9:99183124-99183204 1.95e-04 20_[+5(1.40e-05)]_5_[+2(1.61e-05)]_\ 39 chr16:24267335-24267415 7.99e-01 80 chr15:68193370-68193450 4.50e-01 80 chr17:46438332-46438412 8.93e-01 80 chr10:45906823-45906903 3.71e-04 18_[+1(9.55e-06)]_4_[+4(4.47e-05)]_\ 42 chr14:58765068-58765148 9.97e-02 80 chr2:48373210-48373290 3.06e-03 5_[+2(6.21e-05)]_67 chr8:125461724-125461804 2.45e-04 11_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 49 chr7:150755076-150755156 5.09e-01 80 chr2:61404386-61404466 4.95e-01 80 chr20:39577659-39577739 4.02e-01 80 chr3:135232395-135232475 4.73e-02 9_[+2(1.61e-05)]_63 chr6:10662516-10662596 1.04e-03 33_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 26 chr6:158176290-158176370 4.10e-04 17_[+1(9.55e-06)]_4_[+4(1.32e-05)]_\ 43 chr16:20956277-20956357 7.79e-04 32_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 27 chr2:97587562-97587642 4.59e-04 38_[+5(1.40e-05)]_5_[+2(9.53e-06)]_\ 21 chr7:150689945-150690025 1.46e-01 80 chr4:56608905-56608985 7.05e-02 80 chr5:5586023-5586103 6.30e-02 22_[+5(1.40e-05)]_50 chr17:56833111-56833191 2.97e-01 80 chr16:30583288-30583368 4.11e-01 80 chr10:26051021-26051101 2.09e-03 18_[+1(9.55e-06)]_4_[+4(4.47e-05)]_\ 42 chr21:37700023-37700103 8.16e-01 80 chr2:220094087-220094167 1.27e-01 8_[+3(5.58e-05)]_64 chr1:11610877-11610957 2.19e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n09.farnam.hpc.yale.internal ********************************************************************************