******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF184.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr7:73077524-73077604 1.0000 80 chr14:105766059-10576613 1.0000 80 chr15:39807298-39807378 1.0000 80 chr18:4022931-4023011 1.0000 80 chr7:39062550-39062630 1.0000 80 chr9:74499067-74499147 1.0000 80 chr15:68675662-68675742 1.0000 80 chr5:153606825-153606905 1.0000 80 chr1:6444367-6444447 1.0000 80 chr12:50009675-50009755 1.0000 80 chr10:14959964-14960044 1.0000 80 chr6:135616368-135616448 1.0000 80 chr7:104900804-104900884 1.0000 80 chr2:63994604-63994684 1.0000 80 chr11:85999984-86000064 1.0000 80 chr3:37460030-37460110 1.0000 80 chr9:140650136-140650216 1.0000 80 chrX:129135449-129135529 1.0000 80 chr3:167362575-167362655 1.0000 80 chr1:244452122-244452202 1.0000 80 chr10:80713778-80713858 1.0000 80 chrX:14040279-14040359 1.0000 80 chr19:48365037-48365117 1.0000 80 chr8:129565627-129565707 1.0000 80 chr15:73769327-73769407 1.0000 80 chr6:35785439-35785519 1.0000 80 chr16:14369927-14370007 1.0000 80 chr12:111815389-11181546 1.0000 80 chr22:38439633-38439713 1.0000 80 chr12:697987-698067 1.0000 80 chr7:585203-585283 1.0000 80 chr7:156702714-156702794 1.0000 80 chr22:32986632-32986712 1.0000 80 chr16:69851947-69852027 1.0000 80 chr19:8750353-8750433 1.0000 80 chr19:13433365-13433445 1.0000 80 chr9:91908130-91908210 1.0000 80 chr16:17111465-17111545 1.0000 80 chr17:53898187-53898267 1.0000 80 chr10:46082031-46082111 1.0000 80 chr2:220255598-220255678 1.0000 80 chr2:232249814-232249894 1.0000 80 chr19:10033595-10033675 1.0000 80 chr9:131547878-131547958 1.0000 80 chr15:101675167-10167524 1.0000 80 chr7:106077533-106077613 1.0000 80 chr1:17515544-17515624 1.0000 80 chr19:58657371-58657451 1.0000 80 chr16:15539453-15539533 1.0000 80 chr7:129052480-129052560 1.0000 80 chr19:48304680-48304760 1.0000 80 chr5:1215963-1216043 1.0000 80 chr6:90654700-90654780 1.0000 80 chr10:46085464-46085544 1.0000 80 chr10:22469794-22469874 1.0000 80 chr6:157631112-157631192 1.0000 80 chr2:234319977-234320057 1.0000 80 chr5:815776-815856 1.0000 80 chr6:7359172-7359252 1.0000 80 chr20:56626577-56626657 1.0000 80 chr3:100390008-100390088 1.0000 80 chr3:171223902-171223982 1.0000 80 chr2:159084774-159084854 1.0000 80 chr13:100107220-10010730 1.0000 80 chr17:25754672-25754752 1.0000 80 chr15:85444901-85444981 1.0000 80 chr5:141827641-141827721 1.0000 80 chr17:47058585-47058665 1.0000 80 chr12:125084307-12508438 1.0000 80 chr9:95767891-95767971 1.0000 80 chr19:7849915-7849995 1.0000 80 chr8:103698260-103698340 1.0000 80 chr14:100971189-10097126 1.0000 80 chr5:173167587-173167667 1.0000 80 chr10:35611730-35611810 1.0000 80 chr8:41533717-41533797 1.0000 80 chr9:116229630-116229710 1.0000 80 chr7:70107045-70107125 1.0000 80 chr10:50344740-50344820 1.0000 80 chr10:105592762-10559284 1.0000 80 chr16:85238154-85238234 1.0000 80 chr9:104671668-104671748 1.0000 80 chr12:100514299-10051437 1.0000 80 chr14:104238786-10423886 1.0000 80 chr15:100126511-10012659 1.0000 80 chr7:149366346-149366426 1.0000 80 chr1:12791213-12791293 1.0000 80 chr1:45442089-45442169 1.0000 80 chr15:34878336-34878416 1.0000 80 chr8:41435110-41435190 1.0000 80 chr7:16433610-16433690 1.0000 80 chr5:142645718-142645798 1.0000 80 chr7:131588276-131588356 1.0000 80 chr21:35080328-35080408 1.0000 80 chr11:63346653-63346733 1.0000 80 chr22:17115019-17115099 1.0000 80 chr9:131984336-131984416 1.0000 80 chr2:48356839-48356919 1.0000 80 chr1:8186737-8186817 1.0000 80 chr9:95366448-95366528 1.0000 80 chr3:11280816-11280896 1.0000 80 chr1:26044379-26044459 1.0000 80 chr3:81818418-81818498 1.0000 80 chr1:246217497-246217577 1.0000 80 chr4:795665-795745 1.0000 80 chr20:36350364-36350444 1.0000 80 chr6:155823678-155823758 1.0000 80 chr13:100798940-10079902 1.0000 80 chr9:130518082-130518162 1.0000 80 chr17:33465359-33465439 1.0000 80 chrX:39896805-39896885 1.0000 80 chr11:75458846-75458926 1.0000 80 chr14:23694339-23694419 1.0000 80 chr7:158958218-158958298 1.0000 80 chr21:40739865-40739945 1.0000 80 chr7:132454179-132454259 1.0000 80 chr1:90242997-90243077 1.0000 80 chr10:23231477-23231557 1.0000 80 chr18:2319755-2319835 1.0000 80 chr10:95340105-95340185 1.0000 80 chr14:31694154-31694234 1.0000 80 chr1:167771641-167771721 1.0000 80 chr20:5574829-5574909 1.0000 80 chr1:153688865-153688945 1.0000 80 chr9:100098078-100098158 1.0000 80 chr1:246056482-246056562 1.0000 80 chr10:6302973-6303053 1.0000 80 chr2:178314056-178314136 1.0000 80 chr11:118318287-11831836 1.0000 80 chr5:42868379-42868459 1.0000 80 chr3:141563021-141563101 1.0000 80 chr17:38485296-38485376 1.0000 80 chr19:40594374-40594454 1.0000 80 chr16:11447161-11447241 1.0000 80 chr2:170439540-170439620 1.0000 80 chr2:121920621-121920701 1.0000 80 chr17:43409611-43409691 1.0000 80 chr15:96807782-96807862 1.0000 80 chr4:110782596-110782676 1.0000 80 chrX:119701998-119702078 1.0000 80 chr3:14828026-14828106 1.0000 80 chr11:46982739-46982819 1.0000 80 chr6:43850592-43850672 1.0000 80 chr1:173209927-173210007 1.0000 80 chr7:100506300-100506380 1.0000 80 chr16:67741258-67741338 1.0000 80 chr7:132711064-132711144 1.0000 80 chr2:26247294-26247374 1.0000 80 chr1:44249121-44249201 1.0000 80 chr16:74397985-74398065 1.0000 80 chr8:143504118-143504198 1.0000 80 chr2:172446794-172446874 1.0000 80 chr15:69772440-69772520 1.0000 80 chr1:9430417-9430497 1.0000 80 chr22:43388255-43388335 1.0000 80 chr22:22527771-22527851 1.0000 80 chr7:150568882-150568962 1.0000 80 chr11:76683252-76683332 1.0000 80 chr22:29066828-29066908 1.0000 80 chr19:36447318-36447398 1.0000 80 chr12:114051386-11405146 1.0000 80 chr5:60244729-60244809 1.0000 80 chr19:44443883-44443963 1.0000 80 chr2:96540739-96540819 1.0000 80 chr11:3633391-3633471 1.0000 80 chr2:26232600-26232680 1.0000 80 chr1:20673062-20673142 1.0000 80 chr6:11864148-11864228 1.0000 80 chr4:129067050-129067130 1.0000 80 chr1:3259675-3259755 1.0000 80 chr17:60301089-60301169 1.0000 80 chr20:29465308-29465388 1.0000 80 chr3:4689242-4689322 1.0000 80 chr14:60947114-60947194 1.0000 80 chr18:46682371-46682451 1.0000 80 chr15:90268021-90268101 1.0000 80 chr2:58025816-58025896 1.0000 80 chr2:11975805-11975885 1.0000 80 chr6:87440762-87440842 1.0000 80 chr11:120248838-12024891 1.0000 80 chr2:85916014-85916094 1.0000 80 chr15:29063516-29063596 1.0000 80 chr7:104867974-104868054 1.0000 80 chr1:36012380-36012460 1.0000 80 chr17:11813986-11814066 1.0000 80 chr10:105365787-10536586 1.0000 80 chr15:50559923-50560003 1.0000 80 chr7:155479783-155479863 1.0000 80 chr9:139698479-139698559 1.0000 80 chr11:85246014-85246094 1.0000 80 chr12:83602995-83603075 1.0000 80 chr1:201669517-201669597 1.0000 80 chr14:69265500-69265580 1.0000 80 chr6:33869993-33870073 1.0000 80 chr17:2095782-2095862 1.0000 80 chr2:160102982-160103062 1.0000 80 chr6:48372845-48372925 1.0000 80 chr3:141772773-141772853 1.0000 80 chr2:28882173-28882253 1.0000 80 chr21:36888743-36888823 1.0000 80 chr17:20711040-20711120 1.0000 80 chr21:35730322-35730402 1.0000 80 chr10:3427855-3427935 1.0000 80 chr8:105346881-105346961 1.0000 80 chr16:53365054-53365134 1.0000 80 chr6:141314789-141314869 1.0000 80 chr5:107862950-107863030 1.0000 80 chr18:12578013-12578093 1.0000 80 chr3:186594852-186594932 1.0000 80 chr11:68392706-68392786 1.0000 80 chr10:78248489-78248569 1.0000 80 chr17:47098774-47098854 1.0000 80 chr12:104844628-10484470 1.0000 80 chr17:13336464-13336544 1.0000 80 chr11:72892923-72893003 1.0000 80 chr5:55188449-55188529 1.0000 80 chr16:10734952-10735032 1.0000 80 chr3:44313866-44313946 1.0000 80 chr1:32361225-32361305 1.0000 80 chr5:85849418-85849498 1.0000 80 chr1:243122912-243122992 1.0000 80 chr4:56894498-56894578 1.0000 80 chr19:2999319-2999399 1.0000 80 chr6:111360233-111360313 1.0000 80 chr6:11907531-11907611 1.0000 80 chr2:113474583-113474663 1.0000 80 chr8:29629283-29629363 1.0000 80 chr1:33376023-33376103 1.0000 80 chr9:71311228-71311308 1.0000 80 chr1:36302525-36302605 1.0000 80 chr4:145897032-145897112 1.0000 80 chr1:220065475-220065555 1.0000 80 chr3:17690266-17690346 1.0000 80 chr3:142043528-142043608 1.0000 80 chr3:52013877-52013957 1.0000 80 chr16:81837780-81837860 1.0000 80 chr20:48931615-48931695 1.0000 80 chr11:62205265-62205345 1.0000 80 chr3:46234575-46234655 1.0000 80 chr19:39889167-39889247 1.0000 80 chr10:49733047-49733127 1.0000 80 chr2:24278808-24278888 1.0000 80 chr20:36576385-36576465 1.0000 80 chr16:79727484-79727564 1.0000 80 chr21:37551626-37551706 1.0000 80 chr11:68749771-68749851 1.0000 80 chr14:60721023-60721103 1.0000 80 chr16:14213821-14213901 1.0000 80 chr6:33965180-33965260 1.0000 80 chr2:55032562-55032642 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF184/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF184.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.288 C 0.208 G 0.2 T 0.303 Background letter frequencies (from file dataset with add-one prior applied): A 0.288 C 0.209 G 0.2 T 0.303 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCAACACT MEME-1 width = 8 sites = 127 llr = 1133 E-value = 9.5e-160 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:a7:a:: pos.-specific C 9a::9:a2 probability G :::3:::: matrix T :::::::8 bits 2.3 * 2.1 * * 1.9 * * 1.6 *** *** Relative 1.4 *** *** Entropy 1.2 *** **** (12.9 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCAACACT consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:68749771-68749851 34 1.38e-05 cattctctca ccaacact tggtgttatt chr16:79727484-79727564 15 1.38e-05 tgcattcttg ccaacact tggtattgtt chr2:24278808-24278888 23 1.38e-05 tgtgtcctcc ccaacact tgttattgtc chr3:52013877-52013957 35 1.38e-05 catgtctccc ccaacact gggtattatt chr1:36302525-36302605 5 1.38e-05 ctta ccaacact tggtagtatc chr9:71311228-71311308 41 1.38e-05 tgcctcttca ccaacact tattattatc chr4:56894498-56894578 39 1.38e-05 cacatcgtca ccaacact tgttattttc chr1:243122912-243122992 32 1.38e-05 catatcttcg ccaacact tgtttgtatc chr10:78248489-78248569 29 1.38e-05 caaatcctca ccaacact tggtatggtg chr5:107862950-107863030 26 1.38e-05 catatctttg ccaacact tattattacc chr21:35730322-35730402 53 1.38e-05 cacatcctca ccaacact tggtgttgtc chr17:20711040-20711120 25 1.38e-05 cacattctct ccaacact tgttattatc chr2:28882173-28882253 34 1.38e-05 cacatcctca ccaacact tgttatagtc chr6:48372845-48372925 38 1.38e-05 catatcttca ccaacact taatattatc chr11:85246014-85246094 22 1.38e-05 cacaacctca ccaacact tgttattatt chr17:11813986-11814066 37 1.38e-05 cgagtcttca ccaacact tattatccat chr18:46682371-46682451 45 1.38e-05 cacatcttca ccaacact tgttattatc chr3:4689242-4689322 38 1.38e-05 catatcctta ccaacact tggtatagtc chr6:11864148-11864228 12 1.38e-05 cagattctca ccaacact tgttattttc chr1:20673062-20673142 65 1.38e-05 tccatcctct ccaacact gaatattg chr19:44443883-44443963 21 1.38e-05 ccaatcttca ccaacact tggtgttgtc chr19:36447318-36447398 11 1.38e-05 cacatcttca ccaacact tgttattatt chr16:74397985-74398065 38 1.38e-05 ccctccttct ccaacact tggttaggtg chr2:26247294-26247374 34 1.38e-05 cacatcttta ccaacact tggtattatc chr11:46982739-46982819 33 1.38e-05 catatccttt ccaacact tgttgttgtt chr4:110782596-110782676 31 1.38e-05 catatcctca ccaacact taatgttgtt chr2:121920621-121920701 27 1.38e-05 cacatcctca ccaacact tggtatgatc chr1:153688865-153688945 37 1.38e-05 cacatactcg ccaacact tagtactgtc chr1:167771641-167771721 23 1.38e-05 ggcctcttct ccaacact gaggatcaca chr14:31694154-31694234 36 1.38e-05 catatactca ccaacact tgttattatc chrX:39896805-39896885 27 1.38e-05 catgttctca ccaacact tgttattatg chr6:155823678-155823758 27 1.38e-05 cctgtcctca ccaacact tggtagagtt chr20:36350364-36350444 33 1.38e-05 catatcctca ccaacact tggtattacc chr1:26044379-26044459 31 1.38e-05 catttcctca ccaacact tggtaaaatc chr3:11280816-11280896 34 1.38e-05 cacatcttca ccaacact tgttattgtc chr1:8186737-8186817 71 1.38e-05 CCTCTCTTCT CCAACACt gc chr21:35080328-35080408 7 1.38e-05 tcctca ccaacact agatgtggtc chr7:131588276-131588356 23 1.38e-05 cacatcctca ccaacact tagtattatc chr5:142645718-142645798 28 1.38e-05 cacatcttca ccaacact tggtatggtc chr15:100126511-10012659 26 1.38e-05 catatcttca ccaacact ttgcattgtg chr14:104238786-10423886 38 1.38e-05 cctttcctca ccaacact tgttatgatc chr10:105592762-10559284 30 1.38e-05 catattctca ccaacact tagcattatt chr9:116229630-116229710 34 1.38e-05 acattcctta ccaacact tgttattatc chr8:41533717-41533797 41 1.38e-05 catatcctca ccaacact tgatatggcc chr14:100971189-10097126 26 1.38e-05 cacattctca ccaacact tggtgttgtc chr19:7849915-7849995 39 1.38e-05 cacatcttca ccaacact taatactatg chr17:47058585-47058665 28 1.38e-05 caaagttttg ccaacact gagtaggatc chr5:141827641-141827721 29 1.38e-05 catatcctca ccaacact taatattgcc chr13:100107220-10010730 35 1.38e-05 tgcatcttca ccaacact tgttattatc chr2:234319977-234320057 14 1.38e-05 cacatcctca ccaacact tggtgtgatc chr10:46085464-46085544 41 1.38e-05 cacaacatca ccaacact tattattacc chr5:1215963-1216043 36 1.38e-05 cgtatcctca ccaacact tgttattgtc chr7:129052480-129052560 27 1.38e-05 catatcttca ccaacact tgttattgtc chr1:17515544-17515624 32 1.38e-05 atccacatcg ccaacact tggtattgtg chr2:232249814-232249894 33 1.38e-05 cacatcctca ccaacact tggtatggtc chr10:46082031-46082111 45 1.38e-05 tacatcctca ccaacact tggtattgtt chr9:91908130-91908210 26 1.38e-05 gctgttctca ccaacact tgataatatc chr22:32986632-32986712 25 1.38e-05 catgttctca ccaacact tagcattatt chr15:73769327-73769407 30 1.38e-05 cacatcctca ccaacact tggtattgtc chr19:48365037-48365117 43 1.38e-05 aatgtcctcc ccaacact gaggcttgtg chr5:153606825-153606905 41 1.38e-05 cacatcctca ccaacact tagtatgatc chr7:73077524-73077604 29 1.38e-05 cccttcctca ccaacact tgatgttatt chr20:48931615-48931695 31 2.34e-05 cgtattctca ccagcact tggtggtgtt chr3:44313866-44313946 25 2.34e-05 cacatcttca ccagcact tgttattgtt chr14:69265500-69265580 23 2.34e-05 cacatcctca ccagcact taacagtatt chr1:173209927-173210007 40 2.34e-05 cctatcctca ccagcact tgatattatc chr16:11447161-11447241 47 2.34e-05 cacatcgtct ccagcact gagtgttgtc chr1:90242997-90243077 14 2.34e-05 cacatcctct ccagcact tgttgtttcc chr7:132454179-132454259 50 2.34e-05 cgtgtcttca ccagcact tgttattgtt chr16:85238154-85238234 25 2.34e-05 caccacctca ccagcact tcttgttatt chr15:101675167-10167524 39 2.34e-05 tagttcctct ccagcact tagtgttgtc chr19:13433365-13433445 24 2.34e-05 cacatccttg ccagcact tgttatGAtt chr9:140650136-140650216 36 2.34e-05 tctgtccacg ccagcact tgttagggtt chr7:39062550-39062630 45 2.34e-05 catatcttca ccagcact tagtatggtc chr11:72892923-72893003 25 3.29e-05 cagattctca ccaacacc tggtatggtc chr3:142043528-142043608 62 3.95e-05 catatcctct ccagcacc tgttgtttcc chr6:11907531-11907611 43 3.95e-05 cacatcctct ccagcacc tgttgtttcc chr16:53365054-53365134 26 3.95e-05 cacatcctct ccagcacc tgttgtttct chr12:83602995-83603075 14 3.95e-05 cacatcctct ccagcacc tgttgtttct chr7:155479783-155479863 43 3.95e-05 cacatcctct ccagcacc tgttgtttct chr20:29465308-29465388 27 3.95e-05 catatcctct ccagcacc tgttgttgca chr22:22527771-22527851 46 3.95e-05 cacatcctct ccagcacc tgttgtttcc chr6:43850592-43850672 32 3.95e-05 cacatcctct ccagcacc tattgtttcc chr2:170439540-170439620 34 3.95e-05 cacaacctca ccagcacc tgttattttt chr9:100098078-100098158 34 3.95e-05 cacatcctct ccagcacc tgttgtttcc chr22:17115019-17115099 25 3.95e-05 cacatcctct ccagcacc tgttgtttct chr17:25754672-25754752 28 3.95e-05 cacctcctct ccagcacc tgttgtttcc chr7:106077533-106077613 33 3.95e-05 cacatcctct ccagcacc tgttgtttcc chr7:156702714-156702794 28 3.95e-05 cacatcctct ccagcacc tgttgttacc chr12:104844628-10484470 41 5.86e-05 aaaaagattg acaacact cagtgttggt chr11:76683252-76683332 35 7.86e-05 catatcattg ccaatact tgttattgtt chr2:178314056-178314136 18 7.86e-05 catatccttg ccaatact ttgtattgct chr3:171223902-171223982 20 7.86e-05 tagattcttg ccaatact tggtattggt chr21:37551626-37551706 22 1.13e-04 cccatcctct tcaacact tggtatggtc chr16:10734952-10735032 30 1.13e-04 cccaccttcg tcaacact tagtgtggtc chr11:120248838-12024891 41 1.13e-04 tacatcctca tcaacact tggtagtatc chr5:60244729-60244809 40 1.13e-04 tatatcctta tcaacact tggtatggtc chr1:9430417-9430497 34 1.13e-04 atgtaccaag tcaacact tctagggcca chr12:50009675-50009755 5 1.13e-04 gatc ccaactct gataagaatg chr2:55032562-55032642 29 1.53e-04 tgtgtcttta gcaacact tggtattatc chr16:14213821-14213901 24 1.53e-04 catattcttg ccaagact tggtactgtc chr11:62205265-62205345 25 1.53e-04 catattctca gcaacact tggtattgtc chr2:96540739-96540819 68 1.53e-04 tggagaaata gcaacact tttac chr16:69851947-69852027 41 1.53e-04 tgtatctcca acagcact gggtgttgtc chr22:29066828-29066908 16 1.67e-04 cacatcctca ccagtact tgttattgtc chr17:38485296-38485376 23 1.67e-04 cacatcctcg ccagtact tgttattatc chr3:37460030-37460110 22 1.67e-04 aacatcttca ccagtact tggtatggtc chr2:63994604-63994684 27 1.86e-04 cataacctct ccaaaact tagtatgatt chr20:36576385-36576465 22 2.29e-04 ataaaaaaga caaacact aacaagtact chr17:43409611-43409691 64 2.29e-04 tcccttgtac ccagctct cactgatgg chr11:75458846-75458926 70 2.29e-04 ttagaaccct caaacact act chr9:130518082-130518162 20 2.29e-04 cccactccca ccagctct ttccctggga chr9:95767891-95767971 17 2.47e-04 gctactttcc ccaggact tcaccagcat chr11:85999984-86000064 25 2.47e-04 CAGCTTTCTG CCAGGACT CTTCTCGTCT chr6:33965180-33965260 44 2.60e-04 agaaagactg acaacacc aagtactggt chr1:45442089-45442169 27 2.60e-04 aaaaagactg acaacacc aagtgttgat chr19:10033595-10033675 40 2.60e-04 aaaaagaaag acaacacc aagtgttggg chr12:111815389-11181546 35 2.60e-04 aaaaagactg acaacacc aagtgctggt chr14:105766059-10576613 21 2.60e-04 aaaaacatcg acaacacc aagtgctggt chr17:13336464-13336544 8 3.21e-04 ctccttg ccagaact tggtatgttc chr1:3259675-3259755 39 3.21e-04 ccggtcctca ccgacact tagtgtagtc chr10:6302973-6303053 32 3.21e-04 tgcatcttca ccatcact tggtaccacc chr9:95366448-95366528 28 3.21e-04 cacatcttca ccagaact tagtattgtt chr7:70107045-70107125 31 3.21e-04 gatgtccttg cccacact tgctgttatt chr16:81837780-81837860 29 3.48e-04 catgtcctcg ccaacaca tgttagtatc chr12:697987-698067 71 3.48e-04 catggctaag caagcact tt chr19:39889167-39889247 65 4.74e-04 CGCCTGAGCC CCAGCTCC GGGAAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:68749771-68749851 1.4e-05 33_[+1]_39 chr16:79727484-79727564 1.4e-05 14_[+1]_58 chr2:24278808-24278888 1.4e-05 22_[+1]_50 chr3:52013877-52013957 1.4e-05 34_[+1]_38 chr1:36302525-36302605 1.4e-05 4_[+1]_68 chr9:71311228-71311308 1.4e-05 40_[+1]_32 chr4:56894498-56894578 1.4e-05 38_[+1]_34 chr1:243122912-243122992 1.4e-05 31_[+1]_41 chr10:78248489-78248569 1.4e-05 28_[+1]_44 chr5:107862950-107863030 1.4e-05 25_[+1]_47 chr21:35730322-35730402 1.4e-05 52_[+1]_20 chr17:20711040-20711120 1.4e-05 24_[+1]_48 chr2:28882173-28882253 1.4e-05 33_[+1]_39 chr6:48372845-48372925 1.4e-05 37_[+1]_35 chr11:85246014-85246094 1.4e-05 21_[+1]_51 chr17:11813986-11814066 1.4e-05 36_[+1]_36 chr18:46682371-46682451 1.4e-05 44_[+1]_28 chr3:4689242-4689322 1.4e-05 37_[+1]_35 chr6:11864148-11864228 1.4e-05 11_[+1]_61 chr1:20673062-20673142 1.4e-05 64_[+1]_8 chr19:44443883-44443963 1.4e-05 20_[+1]_52 chr19:36447318-36447398 1.4e-05 10_[+1]_62 chr16:74397985-74398065 1.4e-05 37_[+1]_35 chr2:26247294-26247374 1.4e-05 33_[+1]_39 chr11:46982739-46982819 1.4e-05 32_[+1]_40 chr4:110782596-110782676 1.4e-05 30_[+1]_42 chr2:121920621-121920701 1.4e-05 26_[+1]_46 chr1:153688865-153688945 1.4e-05 36_[+1]_36 chr1:167771641-167771721 1.4e-05 22_[+1]_50 chr14:31694154-31694234 1.4e-05 35_[+1]_37 chrX:39896805-39896885 1.4e-05 26_[+1]_46 chr6:155823678-155823758 1.4e-05 26_[+1]_46 chr20:36350364-36350444 1.4e-05 32_[+1]_40 chr1:26044379-26044459 1.4e-05 30_[+1]_42 chr3:11280816-11280896 1.4e-05 33_[+1]_39 chr1:8186737-8186817 1.4e-05 70_[+1]_2 chr21:35080328-35080408 1.4e-05 6_[+1]_66 chr7:131588276-131588356 1.4e-05 22_[+1]_50 chr5:142645718-142645798 1.4e-05 27_[+1]_45 chr15:100126511-10012659 1.4e-05 25_[+1]_47 chr14:104238786-10423886 1.4e-05 37_[+1]_35 chr10:105592762-10559284 1.4e-05 29_[+1]_43 chr9:116229630-116229710 1.4e-05 33_[+1]_39 chr8:41533717-41533797 1.4e-05 40_[+1]_32 chr14:100971189-10097126 1.4e-05 25_[+1]_47 chr19:7849915-7849995 1.4e-05 38_[+1]_34 chr17:47058585-47058665 1.4e-05 27_[+1]_45 chr5:141827641-141827721 1.4e-05 28_[+1]_44 chr13:100107220-10010730 1.4e-05 34_[+1]_38 chr2:234319977-234320057 1.4e-05 13_[+1]_59 chr10:46085464-46085544 1.4e-05 40_[+1]_32 chr5:1215963-1216043 1.4e-05 35_[+1]_37 chr7:129052480-129052560 1.4e-05 26_[+1]_46 chr1:17515544-17515624 1.4e-05 31_[+1]_41 chr2:232249814-232249894 1.4e-05 32_[+1]_40 chr10:46082031-46082111 1.4e-05 44_[+1]_28 chr9:91908130-91908210 1.4e-05 25_[+1]_47 chr22:32986632-32986712 1.4e-05 24_[+1]_48 chr15:73769327-73769407 1.4e-05 29_[+1]_43 chr19:48365037-48365117 1.4e-05 42_[+1]_30 chr5:153606825-153606905 1.4e-05 40_[+1]_32 chr7:73077524-73077604 1.4e-05 28_[+1]_44 chr20:48931615-48931695 2.3e-05 30_[+1]_42 chr3:44313866-44313946 2.3e-05 24_[+1]_48 chr14:69265500-69265580 2.3e-05 22_[+1]_50 chr1:173209927-173210007 2.3e-05 39_[+1]_33 chr16:11447161-11447241 2.3e-05 46_[+1]_26 chr1:90242997-90243077 2.3e-05 13_[+1]_59 chr7:132454179-132454259 2.3e-05 49_[+1]_23 chr16:85238154-85238234 2.3e-05 24_[+1]_48 chr15:101675167-10167524 2.3e-05 38_[+1]_34 chr19:13433365-13433445 2.3e-05 23_[+1]_49 chr9:140650136-140650216 2.3e-05 35_[+1]_37 chr7:39062550-39062630 2.3e-05 44_[+1]_28 chr11:72892923-72893003 3.3e-05 24_[+1]_48 chr3:142043528-142043608 4e-05 61_[+1]_11 chr6:11907531-11907611 4e-05 42_[+1]_30 chr16:53365054-53365134 4e-05 25_[+1]_47 chr12:83602995-83603075 4e-05 13_[+1]_59 chr7:155479783-155479863 4e-05 42_[+1]_30 chr20:29465308-29465388 4e-05 26_[+1]_46 chr22:22527771-22527851 4e-05 45_[+1]_27 chr6:43850592-43850672 4e-05 31_[+1]_41 chr2:170439540-170439620 4e-05 33_[+1]_39 chr9:100098078-100098158 4e-05 33_[+1]_39 chr22:17115019-17115099 4e-05 24_[+1]_48 chr17:25754672-25754752 4e-05 27_[+1]_45 chr7:106077533-106077613 4e-05 32_[+1]_40 chr7:156702714-156702794 4e-05 27_[+1]_45 chr12:104844628-10484470 5.9e-05 40_[+1]_32 chr11:76683252-76683332 7.9e-05 34_[+1]_38 chr2:178314056-178314136 7.9e-05 17_[+1]_55 chr3:171223902-171223982 7.9e-05 19_[+1]_53 chr21:37551626-37551706 0.00011 21_[+1]_51 chr16:10734952-10735032 0.00011 29_[+1]_43 chr11:120248838-12024891 0.00011 40_[+1]_32 chr5:60244729-60244809 0.00011 39_[+1]_33 chr1:9430417-9430497 0.00011 33_[+1]_39 chr12:50009675-50009755 0.00011 4_[+1]_68 chr2:55032562-55032642 0.00015 28_[+1]_44 chr16:14213821-14213901 0.00015 23_[+1]_49 chr11:62205265-62205345 0.00015 24_[+1]_48 chr2:96540739-96540819 0.00015 67_[+1]_5 chr16:69851947-69852027 0.00015 40_[+1]_32 chr22:29066828-29066908 0.00017 15_[+1]_57 chr17:38485296-38485376 0.00017 22_[+1]_50 chr3:37460030-37460110 0.00017 21_[+1]_51 chr2:63994604-63994684 0.00019 26_[+1]_46 chr20:36576385-36576465 0.00023 21_[+1]_51 chr17:43409611-43409691 0.00023 63_[+1]_9 chr11:75458846-75458926 0.00023 69_[+1]_3 chr9:130518082-130518162 0.00023 19_[+1]_53 chr9:95767891-95767971 0.00025 16_[+1]_56 chr11:85999984-86000064 0.00025 24_[+1]_48 chr6:33965180-33965260 0.00026 43_[+1]_29 chr1:45442089-45442169 0.00026 26_[+1]_46 chr19:10033595-10033675 0.00026 39_[+1]_33 chr12:111815389-11181546 0.00026 34_[+1]_38 chr14:105766059-10576613 0.00026 20_[+1]_52 chr17:13336464-13336544 0.00032 7_[+1]_65 chr1:3259675-3259755 0.00032 38_[+1]_34 chr10:6302973-6303053 0.00032 31_[+1]_41 chr9:95366448-95366528 0.00032 27_[+1]_45 chr7:70107045-70107125 0.00032 30_[+1]_42 chr16:81837780-81837860 0.00035 28_[+1]_44 chr12:697987-698067 0.00035 70_[+1]_2 chr19:39889167-39889247 0.00047 64_[+1]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAACACT width=8 seqs=127 chr11:68749771-68749851 ( 34) CCAACACT 1 chr16:79727484-79727564 ( 15) CCAACACT 1 chr2:24278808-24278888 ( 23) CCAACACT 1 chr3:52013877-52013957 ( 35) CCAACACT 1 chr1:36302525-36302605 ( 5) CCAACACT 1 chr9:71311228-71311308 ( 41) CCAACACT 1 chr4:56894498-56894578 ( 39) CCAACACT 1 chr1:243122912-243122992 ( 32) CCAACACT 1 chr10:78248489-78248569 ( 29) CCAACACT 1 chr5:107862950-107863030 ( 26) CCAACACT 1 chr21:35730322-35730402 ( 53) CCAACACT 1 chr17:20711040-20711120 ( 25) CCAACACT 1 chr2:28882173-28882253 ( 34) CCAACACT 1 chr6:48372845-48372925 ( 38) CCAACACT 1 chr11:85246014-85246094 ( 22) CCAACACT 1 chr17:11813986-11814066 ( 37) CCAACACT 1 chr18:46682371-46682451 ( 45) CCAACACT 1 chr3:4689242-4689322 ( 38) CCAACACT 1 chr6:11864148-11864228 ( 12) CCAACACT 1 chr1:20673062-20673142 ( 65) CCAACACT 1 chr19:44443883-44443963 ( 21) CCAACACT 1 chr19:36447318-36447398 ( 11) CCAACACT 1 chr16:74397985-74398065 ( 38) CCAACACT 1 chr2:26247294-26247374 ( 34) CCAACACT 1 chr11:46982739-46982819 ( 33) CCAACACT 1 chr4:110782596-110782676 ( 31) CCAACACT 1 chr2:121920621-121920701 ( 27) CCAACACT 1 chr1:153688865-153688945 ( 37) CCAACACT 1 chr1:167771641-167771721 ( 23) CCAACACT 1 chr14:31694154-31694234 ( 36) CCAACACT 1 chrX:39896805-39896885 ( 27) CCAACACT 1 chr6:155823678-155823758 ( 27) CCAACACT 1 chr20:36350364-36350444 ( 33) CCAACACT 1 chr1:26044379-26044459 ( 31) CCAACACT 1 chr3:11280816-11280896 ( 34) CCAACACT 1 chr1:8186737-8186817 ( 71) CCAACACT 1 chr21:35080328-35080408 ( 7) CCAACACT 1 chr7:131588276-131588356 ( 23) CCAACACT 1 chr5:142645718-142645798 ( 28) CCAACACT 1 chr15:100126511-10012659 ( 26) CCAACACT 1 chr14:104238786-10423886 ( 38) CCAACACT 1 chr10:105592762-10559284 ( 30) CCAACACT 1 chr9:116229630-116229710 ( 34) CCAACACT 1 chr8:41533717-41533797 ( 41) CCAACACT 1 chr14:100971189-10097126 ( 26) CCAACACT 1 chr19:7849915-7849995 ( 39) CCAACACT 1 chr17:47058585-47058665 ( 28) CCAACACT 1 chr5:141827641-141827721 ( 29) CCAACACT 1 chr13:100107220-10010730 ( 35) CCAACACT 1 chr2:234319977-234320057 ( 14) CCAACACT 1 chr10:46085464-46085544 ( 41) CCAACACT 1 chr5:1215963-1216043 ( 36) CCAACACT 1 chr7:129052480-129052560 ( 27) CCAACACT 1 chr1:17515544-17515624 ( 32) CCAACACT 1 chr2:232249814-232249894 ( 33) CCAACACT 1 chr10:46082031-46082111 ( 45) CCAACACT 1 chr9:91908130-91908210 ( 26) CCAACACT 1 chr22:32986632-32986712 ( 25) CCAACACT 1 chr15:73769327-73769407 ( 30) CCAACACT 1 chr19:48365037-48365117 ( 43) CCAACACT 1 chr5:153606825-153606905 ( 41) CCAACACT 1 chr7:73077524-73077604 ( 29) CCAACACT 1 chr20:48931615-48931695 ( 31) CCAGCACT 1 chr3:44313866-44313946 ( 25) CCAGCACT 1 chr14:69265500-69265580 ( 23) CCAGCACT 1 chr1:173209927-173210007 ( 40) CCAGCACT 1 chr16:11447161-11447241 ( 47) CCAGCACT 1 chr1:90242997-90243077 ( 14) CCAGCACT 1 chr7:132454179-132454259 ( 50) CCAGCACT 1 chr16:85238154-85238234 ( 25) CCAGCACT 1 chr15:101675167-10167524 ( 39) CCAGCACT 1 chr19:13433365-13433445 ( 24) CCAGCACT 1 chr9:140650136-140650216 ( 36) CCAGCACT 1 chr7:39062550-39062630 ( 45) CCAGCACT 1 chr11:72892923-72893003 ( 25) CCAACACC 1 chr3:142043528-142043608 ( 62) CCAGCACC 1 chr6:11907531-11907611 ( 43) CCAGCACC 1 chr16:53365054-53365134 ( 26) CCAGCACC 1 chr12:83602995-83603075 ( 14) CCAGCACC 1 chr7:155479783-155479863 ( 43) CCAGCACC 1 chr20:29465308-29465388 ( 27) CCAGCACC 1 chr22:22527771-22527851 ( 46) CCAGCACC 1 chr6:43850592-43850672 ( 32) CCAGCACC 1 chr2:170439540-170439620 ( 34) CCAGCACC 1 chr9:100098078-100098158 ( 34) CCAGCACC 1 chr22:17115019-17115099 ( 25) CCAGCACC 1 chr17:25754672-25754752 ( 28) CCAGCACC 1 chr7:106077533-106077613 ( 33) CCAGCACC 1 chr7:156702714-156702794 ( 28) CCAGCACC 1 chr12:104844628-10484470 ( 41) ACAACACT 1 chr11:76683252-76683332 ( 35) CCAATACT 1 chr2:178314056-178314136 ( 18) CCAATACT 1 chr3:171223902-171223982 ( 20) CCAATACT 1 chr21:37551626-37551706 ( 22) TCAACACT 1 chr16:10734952-10735032 ( 30) TCAACACT 1 chr11:120248838-12024891 ( 41) TCAACACT 1 chr5:60244729-60244809 ( 40) TCAACACT 1 chr1:9430417-9430497 ( 34) TCAACACT 1 chr12:50009675-50009755 ( 5) CCAACTCT 1 chr2:55032562-55032642 ( 29) GCAACACT 1 chr16:14213821-14213901 ( 24) CCAAGACT 1 chr11:62205265-62205345 ( 25) GCAACACT 1 chr2:96540739-96540819 ( 68) GCAACACT 1 chr16:69851947-69852027 ( 41) ACAGCACT 1 chr22:29066828-29066908 ( 16) CCAGTACT 1 chr17:38485296-38485376 ( 23) CCAGTACT 1 chr3:37460030-37460110 ( 22) CCAGTACT 1 chr2:63994604-63994684 ( 27) CCAAAACT 1 chr20:36576385-36576465 ( 22) CAAACACT 1 chr17:43409611-43409691 ( 64) CCAGCTCT 1 chr11:75458846-75458926 ( 70) CAAACACT 1 chr9:130518082-130518162 ( 20) CCAGCTCT 1 chr9:95767891-95767971 ( 17) CCAGGACT 1 chr11:85999984-86000064 ( 25) CCAGGACT 1 chr6:33965180-33965260 ( 44) ACAACACC 1 chr1:45442089-45442169 ( 27) ACAACACC 1 chr19:10033595-10033675 ( 40) ACAACACC 1 chr12:111815389-11181546 ( 35) ACAACACC 1 chr14:105766059-10576613 ( 21) ACAACACC 1 chr17:13336464-13336544 ( 8) CCAGAACT 1 chr1:3259675-3259755 ( 39) CCGACACT 1 chr10:6302973-6303053 ( 32) CCATCACT 1 chr9:95366448-95366528 ( 28) CCAGAACT 1 chr7:70107045-70107125 ( 31) CCCACACT 1 chr16:81837780-81837860 ( 29) CCAACACA 1 chr12:697987-698067 ( 71) CAAGCACT 1 chr19:39889167-39889247 ( 65) CCAGCTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.89027 E= 9.5e-160 -239 208 -308 -294 -361 223 -1363 -1363 177 -472 -467 -1363 127 -1363 58 -526 -361 212 -308 -268 175 -1363 -1363 -327 -1363 226 -1363 -1363 -519 -33 -1363 145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 127 E= 9.5e-160 0.055118 0.881890 0.023622 0.039370 0.023622 0.976378 0.000000 0.000000 0.984252 0.007874 0.007874 0.000000 0.692913 0.000000 0.299213 0.007874 0.023622 0.905512 0.023622 0.047244 0.968504 0.000000 0.000000 0.031496 0.000000 1.000000 0.000000 0.000000 0.007874 0.165354 0.000000 0.826772 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAACACT MEME-1 regular expression -------------------------------------------------------------------------------- CCA[AG]CACT -------------------------------------------------------------------------------- Time 4.64 secs. ******************************************************************************** ******************************************************************************** MOTIF AGTGTTGG MEME-2 width = 8 sites = 118 llr = 978 E-value = 3.7e-109 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 8:12:::: pos.-specific C ::::3::: probability G 2a:7::a8 matrix T ::9:7a:2 bits 2.3 * 2.1 * * 1.9 * * 1.6 * ** Relative 1.4 * *** Entropy 1.2 **** *** (12.0 bits) 0.9 **** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGTGTTGG consensus AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:46234575-46234655 36 1.28e-05 cataatgcca agtgttgg taaagatgtg chr19:2999319-2999399 54 1.28e-05 gccaataaca agtgttgg tgaggatgca chr5:85849418-85849498 35 1.28e-05 caccataaca agtgttgg caaggatgtg chr12:104844628-10484470 50 1.28e-05 gacaacactc agtgttgg tgaggatgtg chr6:141314789-141314869 64 1.28e-05 gactatacca agtgttgg tgaaaaagt chr8:105346881-105346961 43 1.28e-05 aaccatacca agtgttgg tgaagacatg chr10:3427855-3427935 25 1.28e-05 gacaatacta agtgttgg tgaagacgca chr1:36012380-36012460 43 1.28e-05 aataataaca agtgttgg caaggatgta chr7:104867974-104868054 52 1.28e-05 gatgctaaca agtgttgg tgaggatcct chr2:58025816-58025896 22 1.28e-05 aacaacatca agtgttgg tgaggatgta chr14:60947114-60947194 60 1.28e-05 aataacaaca agtgttgg ggaggatgtg chr17:60301089-60301169 44 1.28e-05 gataataaca agtgttgg agaaaatgtg chr2:26232600-26232680 46 1.28e-05 cacaatacta agtgttgg tgaagatgtg chr11:3633391-3633471 8 1.28e-05 agtaaca agtgttgg cgaagatatg chr12:114051386-11405146 31 1.28e-05 agaaatacaa agtgttgg tgaggacatg chr7:150568882-150568962 42 1.28e-05 gataacaaca agtgttgg tgaggatgtg chr22:43388255-43388335 25 1.28e-05 acatgtacca agtgttgg tgaggatgtg chr2:172446794-172446874 22 1.28e-05 gacaatagca agtgttgg tgagaactca chr8:143504118-143504198 23 1.28e-05 aaccctacta agtgttgg caagaactca chr7:132711064-132711144 72 1.28e-05 aacaataaca agtgttgg t chr7:100506300-100506380 44 1.28e-05 tgtaatcccc agtgttgg agatgagccc chr3:14828026-14828106 54 1.28e-05 aacaacaacc agtgttgg tgaggatgtg chr18:2319755-2319835 29 1.28e-05 tgtaatcccc agtgttgg agatgagtcc chr10:23231477-23231557 41 1.28e-05 gataatacca agtgttgg tgaggatgta chr13:100798940-10079902 57 1.28e-05 gtgatggtgt agtgttgg gaaaTTAATC chr4:795665-795745 29 1.28e-05 gactgtgcta agtgttgg caaggaacac chr2:48356839-48356919 54 1.28e-05 aaccatacca agtgttgg caagcatgtg chr15:85444901-85444981 46 1.28e-05 aaccatatca agtgttgg caaggatata chr20:56626577-56626657 46 1.28e-05 aacaataaca agtgttgg tgaggatgtg chr10:22469794-22469874 61 1.28e-05 aaccatacca agtgttgg caaggatgtg chr6:90654700-90654780 43 1.28e-05 ggcaataaca agtgttgg cgaggatgca chr19:48304680-48304760 34 1.28e-05 cacaatccta agtgttgg ggaagatgct chr19:10033595-10033675 49 1.28e-05 gacaacacca agtgttgg ggaggatatg chr2:220255598-220255678 42 1.28e-05 ggtaatatca agtgttgg agaaggcttg chr17:53898187-53898267 54 1.28e-05 aataataaca agtgttgg caaggatatg chr16:17111465-17111545 29 1.28e-05 aatcatatca agtgttgg cagtaagata chr12:697987-698067 47 1.28e-05 gataatactc agtgttgg tgaagacatg chr16:14369927-14370007 51 1.28e-05 gaccacacca agtgttgg cgaggatatg chr6:35785439-35785519 48 1.28e-05 aataataaca agtgttgg tgagcaagtg chr1:33376023-33376103 58 2.17e-05 gacaataaca agtgctgg tgaagatgtg chr21:36888743-36888823 43 2.17e-05 ggaaacaaca agtgctgg agaggagatg chr3:141772773-141772853 62 2.17e-05 gaccatacca agtgctgg caaggacaca chr2:160102982-160103062 40 2.17e-05 agcaatacca agtgctgg agaggatgtg chr6:87440762-87440842 48 2.17e-05 ggaaacaaca agtgctgg agaggatgtg chr1:246056482-246056562 33 2.17e-05 gacaaaaaca agtgctgg tgaggatttg chr14:23694339-23694419 28 2.17e-05 ggcaataaca agtgctgg cgaggatgtg chr11:63346653-63346733 45 2.17e-05 ggaaacaaca agtgctgg agaggatatg chr10:50344740-50344820 34 2.17e-05 gacaataccc agtgctgg tgaggacgta chr2:159084774-159084854 49 2.17e-05 ggaaacaaca agtgctgg agaggacatg chr16:15539453-15539533 42 2.17e-05 gatcatacta agtgctgg agaggatgta chr7:585203-585283 43 2.17e-05 gattacatca agtgctgg tgaggatgcg chr12:111815389-11181546 44 2.17e-05 gacaacacca agtgctgg tgaggatgtg chr9:74499067-74499147 50 2.17e-05 agtattatca agtgctgg tgagaatggg chr14:105766059-10576613 30 2.17e-05 gacaacacca agtgctgg tgaagatgtg chr1:220065475-220065555 48 5.52e-05 ggaaacaaca ggtgctgg agaggatgtg chr11:68392706-68392786 61 5.52e-05 ggaaacaaca ggtgctgg agaggatgtg chr3:186594852-186594932 43 5.52e-05 gaccatgcca agtattgg tgaaaacgtg chr18:12578013-12578093 41 5.52e-05 aacaataata agtattgg tgaagatgtg chr1:201669517-201669597 51 5.52e-05 ggaaacaaca ggtgctgg agaggatgtg chr15:50559923-50560003 28 5.52e-05 gataacaaca agtattgg tgaagacagg chr2:96540739-96540819 42 5.52e-05 gcaaacaaca ggtgctgg agaagatgtg chr19:40594374-40594454 41 5.52e-05 aatgttaaca agtattgg caagaaaagg chr5:42868379-42868459 23 5.52e-05 ggaaacaaca ggtgctgg agacgatgtg chr21:40739865-40739945 12 5.52e-05 gacactacca agtattgg tgaggatgtg chr15:34878336-34878416 49 5.52e-05 ggaaacaaca ggtgctgg agaggatgtg chr12:100514299-10051437 53 5.52e-05 aactatactg agtattgg tgaagatatg chr10:35611730-35611810 36 5.52e-05 gataatagca agtattgg tgagaatgta chr9:131547878-131547958 33 5.52e-05 gaccacatca agtattgg tgaggacgtg chr19:8750353-8750433 10 5.52e-05 GGTGCAGAT AGTATTGG AAAGATGCAT chr7:104900804-104900884 29 5.52e-05 ggtaacaaca ggtgctgg agaggatgtg chr6:135616368-135616448 40 5.52e-05 gaccatatca agtattgg tgaggaagca chr10:14959964-14960044 50 5.52e-05 aaccatacca agtattgg caacgatgtg chr6:33965180-33965260 53 8.73e-05 gacaacacca agtactgg tgatgatgta chr20:36576385-36576465 34 8.73e-05 aacactaaca agtactgg cgaggatgtg chr16:11447161-11447241 56 8.73e-05 tccagcactg agtgttgt cagtgtctcg chr11:118318287-11831836 33 8.73e-05 cccttacttg agtgttgt ttccatttct chr11:75458846-75458926 36 8.73e-05 ggtaataaca agtgttgt cgaggatgtg chr15:101675167-10167524 48 8.73e-05 tccagcactt agtgttgt cggtcttttc chrX:129135449-129135529 10 1.01e-04 ataagaacc agtgctgt ggaagaggta chr1:167771641-167771721 51 1.34e-04 actcgagatg agagttgg gtggggacac chr3:171223902-171223982 29 1.34e-04 gccaatactt ggtattgg tagtcttttt chr1:244452122-244452202 32 1.34e-04 gacaatatca agtggtgg caaagacatg chr10:49733047-49733127 36 1.56e-04 atCATCatca agtcttgg agaggatttg chr4:129067050-129067130 48 1.56e-04 gacaatatta agtcttgg taaagaagtg chr7:158958218-158958298 22 1.56e-04 gatcatacca agtcttgg caatgatatg chr15:39807298-39807378 43 1.56e-04 aaccatacta agcgttgg caatgatgca chr21:35730322-35730402 62 1.87e-04 accaacactt ggtgttgt cagtcttttt chr17:2095782-2095862 33 1.87e-04 TGCATCACTA AGAGCTGG AGAAAAACGC chr19:44443883-44443963 30 1.87e-04 accaacactt ggtgttgt cagacttttt chr14:100971189-10097126 35 1.87e-04 accaacactt ggtgttgt cagtcttttt chr16:69851947-69852027 50 1.87e-04 aacagcactg ggtgttgt cagtcttttt chr19:39889167-39889247 34 2.02e-04 GTGAATCATC AGTCCTGG GGAAGAACCC chr9:139698479-139698559 39 2.02e-04 AACCCCACTA AGCGCTGG CAACGAGAGT chr9:104671668-104671748 44 2.02e-04 aataatatca agtcctgg agagaatgtg chr9:95366448-95366528 37 2.40e-04 accagaactt agtattgt tctctttttt chr1:45442089-45442169 36 2.58e-04 gacaacacca agtgttga tgaagacgtg chr12:50009675-50009755 53 2.58e-04 gacaatacca agtgttga ggaagatttt chr1:153688865-153688945 46 2.77e-04 gccaacactt agtactgt cagtcttttc chr1:6444367-6444447 54 2.90e-04 gataataaca agtgctga caaggatatg chr2:85916014-85916094 22 3.38e-04 actctcatac aatgttgg caatgttgta chr15:90268021-90268101 23 3.86e-04 gaccacacca agtgatgg tgaagatgtg chr7:16433610-16433690 45 3.86e-04 aactatatca agtagtgg tgaggactag chr8:129565627-129565707 16 3.86e-04 TACCCTCCGA GGAGCTGG CTGCAACTCA chr18:4022931-4023011 6 3.86e-04 gcagt agaattgg tggattgttg chr3:17690266-17690346 56 4.22e-04 aaacataaca aatgctgg caagtttcca chr9:95767891-95767971 30 4.22e-04 ggacttcacc agcattgg atagaaccat chr16:79727484-79727564 24 4.85e-04 gccaacactt ggtattgt tagacttttc chr11:62205265-62205345 34 4.85e-04 agcaacactt ggtattgt cagtcttttc chr8:41533717-41533797 4 4.85e-04 acc agtggtgt atgagagttc chr1:17515544-17515624 41 4.85e-04 gccaacactt ggtattgt gaggcttttt chr10:46082031-46082111 54 4.85e-04 accaacactt ggtattgt tagtcttttt chr15:73769327-73769407 39 4.85e-04 accaacactt ggtattgt cagtcttttt chr15:69772440-69772520 49 5.40e-04 gataaccata ggtgttga cgaggatgtg chr5:142645718-142645798 60 5.40e-04 ttttaaattt agcgttgt aataggtaca chr16:14213821-14213901 33 5.67e-04 gccaagactt ggtactgt cagactttca chr2:11975805-11975885 73 5.67e-04 AGAGCAGGCA AGAGCTGT chrX:39896805-39896885 62 5.67e-04 tttatttatt agagctgt cctaatgggt chr1:32361225-32361305 54 7.65e-04 aataataaca gatgctgg tgaggctgca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:46234575-46234655 1.3e-05 35_[+2]_37 chr19:2999319-2999399 1.3e-05 53_[+2]_19 chr5:85849418-85849498 1.3e-05 34_[+2]_38 chr12:104844628-10484470 1.3e-05 49_[+2]_23 chr6:141314789-141314869 1.3e-05 63_[+2]_9 chr8:105346881-105346961 1.3e-05 42_[+2]_30 chr10:3427855-3427935 1.3e-05 24_[+2]_48 chr1:36012380-36012460 1.3e-05 42_[+2]_30 chr7:104867974-104868054 1.3e-05 51_[+2]_21 chr2:58025816-58025896 1.3e-05 21_[+2]_51 chr14:60947114-60947194 1.3e-05 59_[+2]_13 chr17:60301089-60301169 1.3e-05 43_[+2]_29 chr2:26232600-26232680 1.3e-05 45_[+2]_27 chr11:3633391-3633471 1.3e-05 7_[+2]_65 chr12:114051386-11405146 1.3e-05 30_[+2]_42 chr7:150568882-150568962 1.3e-05 41_[+2]_31 chr22:43388255-43388335 1.3e-05 24_[+2]_48 chr2:172446794-172446874 1.3e-05 21_[+2]_51 chr8:143504118-143504198 1.3e-05 22_[+2]_50 chr7:132711064-132711144 1.3e-05 71_[+2]_1 chr7:100506300-100506380 1.3e-05 43_[+2]_29 chr3:14828026-14828106 1.3e-05 53_[+2]_19 chr18:2319755-2319835 1.3e-05 28_[+2]_44 chr10:23231477-23231557 1.3e-05 40_[+2]_32 chr13:100798940-10079902 1.3e-05 56_[+2]_16 chr4:795665-795745 1.3e-05 28_[+2]_44 chr2:48356839-48356919 1.3e-05 53_[+2]_19 chr15:85444901-85444981 1.3e-05 45_[+2]_27 chr20:56626577-56626657 1.3e-05 45_[+2]_27 chr10:22469794-22469874 1.3e-05 60_[+2]_12 chr6:90654700-90654780 1.3e-05 42_[+2]_30 chr19:48304680-48304760 1.3e-05 33_[+2]_39 chr19:10033595-10033675 1.3e-05 48_[+2]_24 chr2:220255598-220255678 1.3e-05 41_[+2]_31 chr17:53898187-53898267 1.3e-05 53_[+2]_19 chr16:17111465-17111545 1.3e-05 28_[+2]_44 chr12:697987-698067 1.3e-05 46_[+2]_26 chr16:14369927-14370007 1.3e-05 50_[+2]_22 chr6:35785439-35785519 1.3e-05 47_[+2]_25 chr1:33376023-33376103 2.2e-05 57_[+2]_15 chr21:36888743-36888823 2.2e-05 42_[+2]_30 chr3:141772773-141772853 2.2e-05 61_[+2]_11 chr2:160102982-160103062 2.2e-05 39_[+2]_33 chr6:87440762-87440842 2.2e-05 47_[+2]_25 chr1:246056482-246056562 2.2e-05 32_[+2]_40 chr14:23694339-23694419 2.2e-05 27_[+2]_45 chr11:63346653-63346733 2.2e-05 44_[+2]_28 chr10:50344740-50344820 2.2e-05 33_[+2]_39 chr2:159084774-159084854 2.2e-05 48_[+2]_24 chr16:15539453-15539533 2.2e-05 41_[+2]_31 chr7:585203-585283 2.2e-05 42_[+2]_30 chr12:111815389-11181546 2.2e-05 43_[+2]_29 chr9:74499067-74499147 2.2e-05 49_[+2]_23 chr14:105766059-10576613 2.2e-05 29_[+2]_43 chr1:220065475-220065555 5.5e-05 47_[+2]_25 chr11:68392706-68392786 5.5e-05 60_[+2]_12 chr3:186594852-186594932 5.5e-05 42_[+2]_30 chr18:12578013-12578093 5.5e-05 40_[+2]_32 chr1:201669517-201669597 5.5e-05 50_[+2]_22 chr15:50559923-50560003 5.5e-05 27_[+2]_45 chr2:96540739-96540819 5.5e-05 41_[+2]_31 chr19:40594374-40594454 5.5e-05 40_[+2]_32 chr5:42868379-42868459 5.5e-05 22_[+2]_50 chr21:40739865-40739945 5.5e-05 11_[+2]_61 chr15:34878336-34878416 5.5e-05 48_[+2]_24 chr12:100514299-10051437 5.5e-05 52_[+2]_20 chr10:35611730-35611810 5.5e-05 35_[+2]_37 chr9:131547878-131547958 5.5e-05 32_[+2]_40 chr19:8750353-8750433 5.5e-05 9_[+2]_63 chr7:104900804-104900884 5.5e-05 28_[+2]_44 chr6:135616368-135616448 5.5e-05 39_[+2]_33 chr10:14959964-14960044 5.5e-05 49_[+2]_23 chr6:33965180-33965260 8.7e-05 52_[+2]_20 chr20:36576385-36576465 8.7e-05 33_[+2]_39 chr16:11447161-11447241 8.7e-05 55_[+2]_17 chr11:118318287-11831836 8.7e-05 32_[+2]_40 chr11:75458846-75458926 8.7e-05 35_[+2]_37 chr15:101675167-10167524 8.7e-05 47_[+2]_25 chrX:129135449-129135529 0.0001 9_[+2]_63 chr1:167771641-167771721 0.00013 50_[+2]_22 chr3:171223902-171223982 0.00013 28_[+2]_44 chr1:244452122-244452202 0.00013 31_[+2]_41 chr10:49733047-49733127 0.00016 35_[+2]_37 chr4:129067050-129067130 0.00016 47_[+2]_25 chr7:158958218-158958298 0.00016 21_[+2]_51 chr15:39807298-39807378 0.00016 42_[+2]_30 chr21:35730322-35730402 0.00019 61_[+2]_11 chr17:2095782-2095862 0.00019 32_[+2]_40 chr19:44443883-44443963 0.00019 29_[+2]_43 chr14:100971189-10097126 0.00019 34_[+2]_38 chr16:69851947-69852027 0.00019 49_[+2]_23 chr19:39889167-39889247 0.0002 33_[+2]_39 chr9:139698479-139698559 0.0002 38_[+2]_34 chr9:104671668-104671748 0.0002 43_[+2]_29 chr9:95366448-95366528 0.00024 36_[+2]_36 chr1:45442089-45442169 0.00026 35_[+2]_37 chr12:50009675-50009755 0.00026 52_[+2]_20 chr1:153688865-153688945 0.00028 45_[+2]_27 chr1:6444367-6444447 0.00029 53_[+2]_19 chr2:85916014-85916094 0.00034 21_[+2]_51 chr15:90268021-90268101 0.00039 22_[+2]_50 chr7:16433610-16433690 0.00039 44_[+2]_28 chr8:129565627-129565707 0.00039 15_[+2]_57 chr18:4022931-4023011 0.00039 5_[+2]_67 chr3:17690266-17690346 0.00042 55_[+2]_17 chr9:95767891-95767971 0.00042 29_[+2]_43 chr16:79727484-79727564 0.00049 23_[+2]_49 chr11:62205265-62205345 0.00049 33_[+2]_39 chr8:41533717-41533797 0.00049 3_[+2]_69 chr1:17515544-17515624 0.00049 40_[+2]_32 chr10:46082031-46082111 0.00049 53_[+2]_19 chr15:73769327-73769407 0.00049 38_[+2]_34 chr15:69772440-69772520 0.00054 48_[+2]_24 chr5:142645718-142645798 0.00054 59_[+2]_13 chr16:14213821-14213901 0.00057 32_[+2]_40 chr2:11975805-11975885 0.00057 72_[+2] chrX:39896805-39896885 0.00057 61_[+2]_11 chr1:32361225-32361305 0.00077 53_[+2]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGTGTTGG width=8 seqs=118 chr3:46234575-46234655 ( 36) AGTGTTGG 1 chr19:2999319-2999399 ( 54) AGTGTTGG 1 chr5:85849418-85849498 ( 35) AGTGTTGG 1 chr12:104844628-10484470 ( 50) AGTGTTGG 1 chr6:141314789-141314869 ( 64) AGTGTTGG 1 chr8:105346881-105346961 ( 43) AGTGTTGG 1 chr10:3427855-3427935 ( 25) AGTGTTGG 1 chr1:36012380-36012460 ( 43) AGTGTTGG 1 chr7:104867974-104868054 ( 52) AGTGTTGG 1 chr2:58025816-58025896 ( 22) AGTGTTGG 1 chr14:60947114-60947194 ( 60) AGTGTTGG 1 chr17:60301089-60301169 ( 44) AGTGTTGG 1 chr2:26232600-26232680 ( 46) AGTGTTGG 1 chr11:3633391-3633471 ( 8) AGTGTTGG 1 chr12:114051386-11405146 ( 31) AGTGTTGG 1 chr7:150568882-150568962 ( 42) AGTGTTGG 1 chr22:43388255-43388335 ( 25) AGTGTTGG 1 chr2:172446794-172446874 ( 22) AGTGTTGG 1 chr8:143504118-143504198 ( 23) AGTGTTGG 1 chr7:132711064-132711144 ( 72) AGTGTTGG 1 chr7:100506300-100506380 ( 44) AGTGTTGG 1 chr3:14828026-14828106 ( 54) AGTGTTGG 1 chr18:2319755-2319835 ( 29) AGTGTTGG 1 chr10:23231477-23231557 ( 41) AGTGTTGG 1 chr13:100798940-10079902 ( 57) AGTGTTGG 1 chr4:795665-795745 ( 29) AGTGTTGG 1 chr2:48356839-48356919 ( 54) AGTGTTGG 1 chr15:85444901-85444981 ( 46) AGTGTTGG 1 chr20:56626577-56626657 ( 46) AGTGTTGG 1 chr10:22469794-22469874 ( 61) AGTGTTGG 1 chr6:90654700-90654780 ( 43) AGTGTTGG 1 chr19:48304680-48304760 ( 34) AGTGTTGG 1 chr19:10033595-10033675 ( 49) AGTGTTGG 1 chr2:220255598-220255678 ( 42) AGTGTTGG 1 chr17:53898187-53898267 ( 54) AGTGTTGG 1 chr16:17111465-17111545 ( 29) AGTGTTGG 1 chr12:697987-698067 ( 47) AGTGTTGG 1 chr16:14369927-14370007 ( 51) AGTGTTGG 1 chr6:35785439-35785519 ( 48) AGTGTTGG 1 chr1:33376023-33376103 ( 58) AGTGCTGG 1 chr21:36888743-36888823 ( 43) AGTGCTGG 1 chr3:141772773-141772853 ( 62) AGTGCTGG 1 chr2:160102982-160103062 ( 40) AGTGCTGG 1 chr6:87440762-87440842 ( 48) AGTGCTGG 1 chr1:246056482-246056562 ( 33) AGTGCTGG 1 chr14:23694339-23694419 ( 28) AGTGCTGG 1 chr11:63346653-63346733 ( 45) AGTGCTGG 1 chr10:50344740-50344820 ( 34) AGTGCTGG 1 chr2:159084774-159084854 ( 49) AGTGCTGG 1 chr16:15539453-15539533 ( 42) AGTGCTGG 1 chr7:585203-585283 ( 43) AGTGCTGG 1 chr12:111815389-11181546 ( 44) AGTGCTGG 1 chr9:74499067-74499147 ( 50) AGTGCTGG 1 chr14:105766059-10576613 ( 30) AGTGCTGG 1 chr1:220065475-220065555 ( 48) GGTGCTGG 1 chr11:68392706-68392786 ( 61) GGTGCTGG 1 chr3:186594852-186594932 ( 43) AGTATTGG 1 chr18:12578013-12578093 ( 41) AGTATTGG 1 chr1:201669517-201669597 ( 51) GGTGCTGG 1 chr15:50559923-50560003 ( 28) AGTATTGG 1 chr2:96540739-96540819 ( 42) GGTGCTGG 1 chr19:40594374-40594454 ( 41) AGTATTGG 1 chr5:42868379-42868459 ( 23) GGTGCTGG 1 chr21:40739865-40739945 ( 12) AGTATTGG 1 chr15:34878336-34878416 ( 49) GGTGCTGG 1 chr12:100514299-10051437 ( 53) AGTATTGG 1 chr10:35611730-35611810 ( 36) AGTATTGG 1 chr9:131547878-131547958 ( 33) AGTATTGG 1 chr19:8750353-8750433 ( 10) AGTATTGG 1 chr7:104900804-104900884 ( 29) GGTGCTGG 1 chr6:135616368-135616448 ( 40) AGTATTGG 1 chr10:14959964-14960044 ( 50) AGTATTGG 1 chr6:33965180-33965260 ( 53) AGTACTGG 1 chr20:36576385-36576465 ( 34) AGTACTGG 1 chr16:11447161-11447241 ( 56) AGTGTTGT 1 chr11:118318287-11831836 ( 33) AGTGTTGT 1 chr11:75458846-75458926 ( 36) AGTGTTGT 1 chr15:101675167-10167524 ( 48) AGTGTTGT 1 chrX:129135449-129135529 ( 10) AGTGCTGT 1 chr1:167771641-167771721 ( 51) AGAGTTGG 1 chr3:171223902-171223982 ( 29) GGTATTGG 1 chr1:244452122-244452202 ( 32) AGTGGTGG 1 chr10:49733047-49733127 ( 36) AGTCTTGG 1 chr4:129067050-129067130 ( 48) AGTCTTGG 1 chr7:158958218-158958298 ( 22) AGTCTTGG 1 chr15:39807298-39807378 ( 43) AGCGTTGG 1 chr21:35730322-35730402 ( 62) GGTGTTGT 1 chr17:2095782-2095862 ( 33) AGAGCTGG 1 chr19:44443883-44443963 ( 30) GGTGTTGT 1 chr14:100971189-10097126 ( 35) GGTGTTGT 1 chr16:69851947-69852027 ( 50) GGTGTTGT 1 chr19:39889167-39889247 ( 34) AGTCCTGG 1 chr9:139698479-139698559 ( 39) AGCGCTGG 1 chr9:104671668-104671748 ( 44) AGTCCTGG 1 chr9:95366448-95366528 ( 37) AGTATTGT 1 chr1:45442089-45442169 ( 36) AGTGTTGA 1 chr12:50009675-50009755 ( 53) AGTGTTGA 1 chr1:153688865-153688945 ( 46) AGTACTGT 1 chr1:6444367-6444447 ( 54) AGTGCTGA 1 chr2:85916014-85916094 ( 22) AATGTTGG 1 chr15:90268021-90268101 ( 23) AGTGATGG 1 chr7:16433610-16433690 ( 45) AGTAGTGG 1 chr8:129565627-129565707 ( 16) GGAGCTGG 1 chr18:4022931-4023011 ( 6) AGAATTGG 1 chr3:17690266-17690346 ( 56) AATGCTGG 1 chr9:95767891-95767971 ( 30) AGCATTGG 1 chr16:79727484-79727564 ( 24) GGTATTGT 1 chr11:62205265-62205345 ( 34) GGTATTGT 1 chr8:41533717-41533797 ( 4) AGTGGTGT 1 chr1:17515544-17515624 ( 41) GGTATTGT 1 chr10:46082031-46082111 ( 54) GGTATTGT 1 chr15:73769327-73769407 ( 39) GGTATTGT 1 chr15:69772440-69772520 ( 49) GGTGTTGA 1 chr5:142645718-142645798 ( 60) AGCGTTGT 1 chr16:14213821-14213901 ( 33) GGTACTGT 1 chr2:11975805-11975885 ( 73) AGAGCTGT 1 chrX:39896805-39896885 ( 62) AGAGCTGT 1 chr1:32361225-32361305 ( 54) GATGCTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.53113 E= 3.7e-109 151 -1353 -17 -1353 -350 -1353 228 -1353 -250 -262 -1353 159 -44 -230 190 -1353 -508 59 -298 111 -1353 -1353 -1353 172 -1353 -1353 232 -1353 -309 -1353 198 -77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 118 E= 3.7e-109 0.822034 0.000000 0.177966 0.000000 0.025424 0.000000 0.974576 0.000000 0.050847 0.033898 0.000000 0.915254 0.211864 0.042373 0.745763 0.000000 0.008475 0.313559 0.025424 0.652542 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.033898 0.000000 0.788136 0.177966 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTGTTGG MEME-2 regular expression -------------------------------------------------------------------------------- AGT[GA][TC]TGG -------------------------------------------------------------------------------- Time 7.84 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTTTAA MEME-3 width = 8 sites = 91 llr = 766 E-value = 1.1e-072 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::89 pos.-specific C a:::211: probability G :::::::1 matrix T :aaa891: bits 2.3 * 2.1 * 1.9 * 1.6 **** * Relative 1.4 **** * Entropy 1.2 ****** * (12.1 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTTTTAA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:55032562-55032642 50 4.43e-05 tattatcagt ctttttaa ttttagttgt chr2:113474583-113474663 14 4.43e-05 tgttacctga ctttttaa tgatcgccat chr6:11907531-11907611 64 4.43e-05 tgtttcctga ctttttaa ttatctcca chr4:56894498-56894578 59 4.43e-05 ttattttcca ctttttaa ttacaataat chr16:10734952-10735032 51 4.43e-05 tgtggtcagt ctttttaa tttcagccat chr11:72892923-72893003 46 4.43e-05 tatggtcagt ctttttaa tgttagccat chr10:78248489-78248569 50 4.43e-05 tatggtgagt ctttttaa ttatCATatt chr2:28882173-28882253 51 4.43e-05 ttgttatagt ctttttaa tttcaagagc chr12:83602995-83603075 35 4.43e-05 tgtttcttga ctttttaa tgatcaccat chr11:85246014-85246094 43 4.43e-05 tattatttga ctttttaa tatagtcatt chr7:155479783-155479863 64 4.43e-05 tgtttcttga ctttttaa tgatcacca chr11:120248838-12024891 62 4.43e-05 tagtatcagt ctttttaa ttttagtcat chr20:29465308-29465388 48 4.43e-05 tgttgcatga ctttttaa tgatcaccat chr19:44443883-44443963 42 4.43e-05 tgttgtcaga ctttttaa gtcattctgt chr5:60244729-60244809 61 4.43e-05 tatggtcagt ctttttaa ttttagctct chr19:36447318-36447398 32 4.43e-05 tattatttct ctttttaa ttacagccat chr22:29066828-29066908 37 4.43e-05 tattgtctat ctttttaa ctttagccac chr22:22527771-22527851 67 4.43e-05 tgtttcctga ctttttaa tgattg chr6:43850592-43850672 53 4.43e-05 tgtttcctga ctttttaa tgatcgccat chr2:170439540-170439620 55 4.43e-05 tattttttga ctttttaa taatagccat chr2:178314056-178314136 39 4.43e-05 tattgctagt ctttttaa ttttagtcta chr9:100098078-100098158 55 4.43e-05 tgtttcctga ctttttaa tgattgccat chr14:31694154-31694234 57 4.43e-05 tattatctga ctttttaa ttatagccat chr1:90242997-90243077 35 4.43e-05 tgtttcctga ctttttaa tgattgccat chr6:155823678-155823758 48 4.43e-05 tagagttagt ctttttaa ttttagccaa chr1:26044379-26044459 58 4.43e-05 cagtcttttt ctttttaa ggctgttcta chr3:11280816-11280896 55 4.43e-05 tattgtcctt ctttttaa attatagtca chr22:17115019-17115099 46 4.43e-05 tgtttcttga ctttttaa tgatcaccat chr1:12791213-12791293 41 4.43e-05 tgttacttga ctttttaa taattgccat chr15:100126511-10012659 47 4.43e-05 cattgtgagc ctttttaa gttgagacat chr14:104238786-10423886 59 4.43e-05 tatgatcagt ctttttaa cattagacat chr9:116229630-116229710 55 4.43e-05 tattatctga ctttttaa ttctagctat chr8:41533717-41533797 62 4.43e-05 tatggccagc ctttttaa ttttaaccat chr19:7849915-7849995 60 4.43e-05 tactatgcat ctttttaa tggttgcatt chr17:47058585-47058665 49 4.43e-05 taggatcagt ctttttaa ttttaagcca chr17:25754672-25754752 49 4.43e-05 tgtttcctga ctttttaa tgatcgcctt chr3:171223902-171223982 41 4.43e-05 tattggtagt ctttttaa ttttagccat chr6:7359172-7359252 51 4.43e-05 tatagtcagt ctttttaa ttttagacat chr2:234319977-234320057 35 4.43e-05 tgtgatcagt ctttttaa ttttatgtgt chr1:17515544-17515624 53 4.43e-05 tattgtgagg ctttttaa ccttggctat chr7:106077533-106077613 54 4.43e-05 tgtttcctga ctttttaa tgatcaccat chr16:69851947-69852027 62 4.43e-05 tgttgtcagt ctttttaa cttaccttag chr22:32986632-32986712 46 4.43e-05 cattattaat ctttttaa ttttggctat chr7:156702714-156702794 49 4.43e-05 tgttacctga ctttttaa tgattgccat chr15:73769327-73769407 51 4.43e-05 tattgtcagt ctttttaa cttatctatc chr19:48365037-48365117 64 4.43e-05 gcttgtgaga ctttttaa tgtttgtcg chr3:167362575-167362655 52 4.43e-05 tgttattgat ctttttaa tatttgccaa chr9:140650136-140650216 57 4.43e-05 tagggttagt ctttttaa ttccagtgga chr3:37460030-37460110 43 4.43e-05 tatggtcagt ctttttaa tttttgtcat chr2:63994604-63994684 48 4.43e-05 tatgattagt ctttttaa ttttagacat chr7:73077524-73077604 50 4.43e-05 tgttattgga ctttttaa tttgtgccaa chr8:29629283-29629363 70 7.48e-05 TTAGAATGCC CTTTCTAA CTC chr17:13336464-13336544 29 7.48e-05 tatgttcagt ctttctaa ttttagctct chr2:26247294-26247374 55 7.48e-05 tattatccat ctttctaa tttttgccat chr2:121920621-121920701 48 7.48e-05 tatgatcagt ctttctaa agtttagtca chr10:6302973-6303053 53 7.48e-05 taccaccagt ctttctaa tttcagctta chr10:105592762-10559284 65 7.48e-05 tcatCCTGTA CTTTCTAA CAGAGAAT chr12:125084307-12508438 48 7.48e-05 tattaccagc ctttctaa cgccagcctc chr3:100390008-100390088 60 7.48e-05 tgttacctga ctttctaa tgatcgccat chr2:232249814-232249894 54 7.48e-05 tatggtcagt ctttctaa ttcaaacatt chr9:91908130-91908210 47 7.48e-05 taatatctga ctttctaa tttttgccac chr21:37551626-37551706 43 1.07e-04 tatggtcagt ctttttca ctttggtcat chr10:49733047-49733127 58 1.07e-04 gatttgggca ctttttca tgagagtgtg chr4:110782596-110782676 52 1.07e-04 tgttgttggt ctttttca tttcagctat chr10:95340105-95340185 50 1.07e-04 AGAAGTGTCT CTTTTTCA CATCACCCTG chr14:100971189-10097126 47 1.07e-04 tgttgtcagt ctttttca ttttagttat chr10:46082031-46082111 66 1.07e-04 tattgttagt ctttttca ttttgac chr16:79727484-79727564 36 1.68e-04 tattgttaga cttttcaa ttctaaacta chr16:53365054-53365134 47 1.68e-04 tgtttcttga ctttttag tgatcgccat chr3:4689242-4689322 59 1.68e-04 tatagtcagt cttttcaa tgttactcgt chr11:76683252-76683332 56 1.68e-04 tattgtttat ctttttag tatagccatc chr1:153688865-153688945 58 1.68e-04 tactgtcagt cttttcaa ttgtagctct chr15:101675167-10167524 60 1.68e-04 tgttgtcggt cttttcaa ttttagcttt chr3:44313866-44313946 46 1.99e-04 tattgtttgt ctttttga taatagccat chr7:129052480-129052560 48 1.99e-04 tattgtcagt ctttttga tattgccatc chr1:173209927-173210007 61 2.68e-04 tattatctga ctttctca tgtttgccaa chr11:46982739-46982819 53 2.68e-04 ttgttgttgc ctttttta ttatagccat chrX:39896805-39896885 48 2.68e-04 tattatgtgt ctttttta tttattagag chr9:95366448-95366528 48 2.68e-04 gtattgttct ctttttta ttttagccat chr21:35080328-35080408 28 2.68e-04 tgtggtcatt ctttctca tattagccat chr10:46085464-46085544 62 2.68e-04 tattacctgt ctttttta ttatacatag chr5:55188449-55188529 73 3.52e-04 TGTCACTCTT CTTTCTAG chr5:142645718-142645798 49 3.52e-04 tatggtcagt cttttaaa tttagcgttg chr7:70107045-70107125 52 3.52e-04 tgttattcac ctttctag cttttgccat chrX:14040279-14040359 49 3.52e-04 GGGAACACAT CTTTCCAA ATGACCAGAA chr11:85999984-86000064 52 3.52e-04 TGTGGCTGTG CTTTCTAG TCTTCTGGGC chr5:153606825-153606905 62 3.52e-04 tatgatcagt cttttaaa ttttagcctt chr9:71311228-71311308 62 3.73e-04 tattatctct ctttctga ttctagccat chr16:85238154-85238234 46 3.73e-04 tgttatttgc ctttctga ttctagccat chr17:38485296-38485376 44 4.05e-04 tattatctgt ctttctta ttagagctag chr16:14213821-14213901 45 4.34e-04 tactgtcaga ctttcaaa tttttgccaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:55032562-55032642 4.4e-05 49_[+3]_23 chr2:113474583-113474663 4.4e-05 13_[+3]_59 chr6:11907531-11907611 4.4e-05 63_[+3]_9 chr4:56894498-56894578 4.4e-05 58_[+3]_14 chr16:10734952-10735032 4.4e-05 50_[+3]_22 chr11:72892923-72893003 4.4e-05 45_[+3]_27 chr10:78248489-78248569 4.4e-05 49_[+3]_23 chr2:28882173-28882253 4.4e-05 50_[+3]_22 chr12:83602995-83603075 4.4e-05 34_[+3]_38 chr11:85246014-85246094 4.4e-05 42_[+3]_30 chr7:155479783-155479863 4.4e-05 63_[+3]_9 chr11:120248838-12024891 4.4e-05 61_[+3]_11 chr20:29465308-29465388 4.4e-05 47_[+3]_25 chr19:44443883-44443963 4.4e-05 41_[+3]_31 chr5:60244729-60244809 4.4e-05 60_[+3]_12 chr19:36447318-36447398 4.4e-05 31_[+3]_41 chr22:29066828-29066908 4.4e-05 36_[+3]_36 chr22:22527771-22527851 4.4e-05 66_[+3]_6 chr6:43850592-43850672 4.4e-05 52_[+3]_20 chr2:170439540-170439620 4.4e-05 54_[+3]_18 chr2:178314056-178314136 4.4e-05 38_[+3]_34 chr9:100098078-100098158 4.4e-05 54_[+3]_18 chr14:31694154-31694234 4.4e-05 56_[+3]_16 chr1:90242997-90243077 4.4e-05 34_[+3]_38 chr6:155823678-155823758 4.4e-05 47_[+3]_25 chr1:26044379-26044459 4.4e-05 57_[+3]_15 chr3:11280816-11280896 4.4e-05 54_[+3]_18 chr22:17115019-17115099 4.4e-05 45_[+3]_27 chr1:12791213-12791293 4.4e-05 40_[+3]_32 chr15:100126511-10012659 4.4e-05 46_[+3]_26 chr14:104238786-10423886 4.4e-05 58_[+3]_14 chr9:116229630-116229710 4.4e-05 54_[+3]_18 chr8:41533717-41533797 4.4e-05 61_[+3]_11 chr19:7849915-7849995 4.4e-05 59_[+3]_13 chr17:47058585-47058665 4.4e-05 48_[+3]_24 chr17:25754672-25754752 4.4e-05 48_[+3]_24 chr3:171223902-171223982 4.4e-05 40_[+3]_32 chr6:7359172-7359252 4.4e-05 50_[+3]_22 chr2:234319977-234320057 4.4e-05 34_[+3]_38 chr1:17515544-17515624 4.4e-05 52_[+3]_20 chr7:106077533-106077613 4.4e-05 53_[+3]_19 chr16:69851947-69852027 4.4e-05 61_[+3]_11 chr22:32986632-32986712 4.4e-05 45_[+3]_27 chr7:156702714-156702794 4.4e-05 48_[+3]_24 chr15:73769327-73769407 4.4e-05 50_[+3]_22 chr19:48365037-48365117 4.4e-05 63_[+3]_9 chr3:167362575-167362655 4.4e-05 51_[+3]_21 chr9:140650136-140650216 4.4e-05 56_[+3]_16 chr3:37460030-37460110 4.4e-05 42_[+3]_30 chr2:63994604-63994684 4.4e-05 47_[+3]_25 chr7:73077524-73077604 4.4e-05 49_[+3]_23 chr8:29629283-29629363 7.5e-05 69_[+3]_3 chr17:13336464-13336544 7.5e-05 28_[+3]_44 chr2:26247294-26247374 7.5e-05 54_[+3]_18 chr2:121920621-121920701 7.5e-05 47_[+3]_25 chr10:6302973-6303053 7.5e-05 52_[+3]_20 chr10:105592762-10559284 7.5e-05 64_[+3]_8 chr12:125084307-12508438 7.5e-05 47_[+3]_25 chr3:100390008-100390088 7.5e-05 59_[+3]_13 chr2:232249814-232249894 7.5e-05 53_[+3]_19 chr9:91908130-91908210 7.5e-05 46_[+3]_26 chr21:37551626-37551706 0.00011 42_[+3]_30 chr10:49733047-49733127 0.00011 57_[+3]_15 chr4:110782596-110782676 0.00011 51_[+3]_21 chr10:95340105-95340185 0.00011 49_[+3]_23 chr14:100971189-10097126 0.00011 46_[+3]_26 chr10:46082031-46082111 0.00011 65_[+3]_7 chr16:79727484-79727564 0.00017 35_[+3]_37 chr16:53365054-53365134 0.00017 46_[+3]_26 chr3:4689242-4689322 0.00017 58_[+3]_14 chr11:76683252-76683332 0.00017 55_[+3]_17 chr1:153688865-153688945 0.00017 57_[+3]_15 chr15:101675167-10167524 0.00017 59_[+3]_13 chr3:44313866-44313946 0.0002 45_[+3]_27 chr7:129052480-129052560 0.0002 47_[+3]_25 chr1:173209927-173210007 0.00027 60_[+3]_12 chr11:46982739-46982819 0.00027 52_[+3]_20 chrX:39896805-39896885 0.00027 47_[+3]_25 chr9:95366448-95366528 0.00027 47_[+3]_25 chr21:35080328-35080408 0.00027 27_[+3]_45 chr10:46085464-46085544 0.00027 61_[+3]_11 chr5:55188449-55188529 0.00035 72_[+3] chr5:142645718-142645798 0.00035 48_[+3]_24 chr7:70107045-70107125 0.00035 51_[+3]_21 chrX:14040279-14040359 0.00035 48_[+3]_24 chr11:85999984-86000064 0.00035 51_[+3]_21 chr5:153606825-153606905 0.00035 61_[+3]_11 chr9:71311228-71311308 0.00037 61_[+3]_11 chr16:85238154-85238234 0.00037 45_[+3]_27 chr17:38485296-38485376 0.00041 43_[+3]_29 chr16:14213821-14213901 0.00043 44_[+3]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTTTAA width=8 seqs=91 chr2:55032562-55032642 ( 50) CTTTTTAA 1 chr2:113474583-113474663 ( 14) CTTTTTAA 1 chr6:11907531-11907611 ( 64) CTTTTTAA 1 chr4:56894498-56894578 ( 59) CTTTTTAA 1 chr16:10734952-10735032 ( 51) CTTTTTAA 1 chr11:72892923-72893003 ( 46) CTTTTTAA 1 chr10:78248489-78248569 ( 50) CTTTTTAA 1 chr2:28882173-28882253 ( 51) CTTTTTAA 1 chr12:83602995-83603075 ( 35) CTTTTTAA 1 chr11:85246014-85246094 ( 43) CTTTTTAA 1 chr7:155479783-155479863 ( 64) CTTTTTAA 1 chr11:120248838-12024891 ( 62) CTTTTTAA 1 chr20:29465308-29465388 ( 48) CTTTTTAA 1 chr19:44443883-44443963 ( 42) CTTTTTAA 1 chr5:60244729-60244809 ( 61) CTTTTTAA 1 chr19:36447318-36447398 ( 32) CTTTTTAA 1 chr22:29066828-29066908 ( 37) CTTTTTAA 1 chr22:22527771-22527851 ( 67) CTTTTTAA 1 chr6:43850592-43850672 ( 53) CTTTTTAA 1 chr2:170439540-170439620 ( 55) CTTTTTAA 1 chr2:178314056-178314136 ( 39) CTTTTTAA 1 chr9:100098078-100098158 ( 55) CTTTTTAA 1 chr14:31694154-31694234 ( 57) CTTTTTAA 1 chr1:90242997-90243077 ( 35) CTTTTTAA 1 chr6:155823678-155823758 ( 48) CTTTTTAA 1 chr1:26044379-26044459 ( 58) CTTTTTAA 1 chr3:11280816-11280896 ( 55) CTTTTTAA 1 chr22:17115019-17115099 ( 46) CTTTTTAA 1 chr1:12791213-12791293 ( 41) CTTTTTAA 1 chr15:100126511-10012659 ( 47) CTTTTTAA 1 chr14:104238786-10423886 ( 59) CTTTTTAA 1 chr9:116229630-116229710 ( 55) CTTTTTAA 1 chr8:41533717-41533797 ( 62) CTTTTTAA 1 chr19:7849915-7849995 ( 60) CTTTTTAA 1 chr17:47058585-47058665 ( 49) CTTTTTAA 1 chr17:25754672-25754752 ( 49) CTTTTTAA 1 chr3:171223902-171223982 ( 41) CTTTTTAA 1 chr6:7359172-7359252 ( 51) CTTTTTAA 1 chr2:234319977-234320057 ( 35) CTTTTTAA 1 chr1:17515544-17515624 ( 53) CTTTTTAA 1 chr7:106077533-106077613 ( 54) CTTTTTAA 1 chr16:69851947-69852027 ( 62) CTTTTTAA 1 chr22:32986632-32986712 ( 46) CTTTTTAA 1 chr7:156702714-156702794 ( 49) CTTTTTAA 1 chr15:73769327-73769407 ( 51) CTTTTTAA 1 chr19:48365037-48365117 ( 64) CTTTTTAA 1 chr3:167362575-167362655 ( 52) CTTTTTAA 1 chr9:140650136-140650216 ( 57) CTTTTTAA 1 chr3:37460030-37460110 ( 43) CTTTTTAA 1 chr2:63994604-63994684 ( 48) CTTTTTAA 1 chr7:73077524-73077604 ( 50) CTTTTTAA 1 chr8:29629283-29629363 ( 70) CTTTCTAA 1 chr17:13336464-13336544 ( 29) CTTTCTAA 1 chr2:26247294-26247374 ( 55) CTTTCTAA 1 chr2:121920621-121920701 ( 48) CTTTCTAA 1 chr10:6302973-6303053 ( 53) CTTTCTAA 1 chr10:105592762-10559284 ( 65) CTTTCTAA 1 chr12:125084307-12508438 ( 48) CTTTCTAA 1 chr3:100390008-100390088 ( 60) CTTTCTAA 1 chr2:232249814-232249894 ( 54) CTTTCTAA 1 chr9:91908130-91908210 ( 47) CTTTCTAA 1 chr21:37551626-37551706 ( 43) CTTTTTCA 1 chr10:49733047-49733127 ( 58) CTTTTTCA 1 chr4:110782596-110782676 ( 52) CTTTTTCA 1 chr10:95340105-95340185 ( 50) CTTTTTCA 1 chr14:100971189-10097126 ( 47) CTTTTTCA 1 chr10:46082031-46082111 ( 66) CTTTTTCA 1 chr16:79727484-79727564 ( 36) CTTTTCAA 1 chr16:53365054-53365134 ( 47) CTTTTTAG 1 chr3:4689242-4689322 ( 59) CTTTTCAA 1 chr11:76683252-76683332 ( 56) CTTTTTAG 1 chr1:153688865-153688945 ( 58) CTTTTCAA 1 chr15:101675167-10167524 ( 60) CTTTTCAA 1 chr3:44313866-44313946 ( 46) CTTTTTGA 1 chr7:129052480-129052560 ( 48) CTTTTTGA 1 chr1:173209927-173210007 ( 61) CTTTCTCA 1 chr11:46982739-46982819 ( 53) CTTTTTTA 1 chrX:39896805-39896885 ( 48) CTTTTTTA 1 chr9:95366448-95366528 ( 48) CTTTTTTA 1 chr21:35080328-35080408 ( 28) CTTTCTCA 1 chr10:46085464-46085544 ( 62) CTTTTTTA 1 chr5:55188449-55188529 ( 73) CTTTCTAG 1 chr5:142645718-142645798 ( 49) CTTTTAAA 1 chr7:70107045-70107125 ( 52) CTTTCTAG 1 chrX:14040279-14040359 ( 49) CTTTCCAA 1 chr11:85999984-86000064 ( 52) CTTTCTAG 1 chr5:153606825-153606905 ( 62) CTTTTAAA 1 chr9:71311228-71311308 ( 62) CTTTCTGA 1 chr16:85238154-85238234 ( 46) CTTTCTGA 1 chr17:38485296-38485376 ( 44) CTTTCTTA 1 chr16:14213821-14213901 ( 45) CTTTCAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.03325 E= 1.1e-072 -1315 226 -1315 -1315 -1315 -1315 -1315 172 -1315 -1315 -1315 172 -1315 -1315 -1315 172 -1315 8 -1315 136 -313 -192 -1315 159 150 -125 -219 -246 171 -1315 -187 -1315 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 91 E= 1.1e-072 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.219780 0.000000 0.780220 0.032967 0.054945 0.000000 0.912088 0.813187 0.087912 0.043956 0.054945 0.945055 0.000000 0.054945 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAA MEME-3 regular expression -------------------------------------------------------------------------------- CTTT[TC]TAA -------------------------------------------------------------------------------- Time 10.76 secs. ******************************************************************************** ******************************************************************************** MOTIF CCAYATCC MEME-4 width = 8 sites = 101 llr = 781 E-value = 3.6e-058 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::9:8::2 pos.-specific C aa1611a6 probability G :::::::: matrix T :::418:1 bits 2.3 * 2.1 ** * 1.9 ** * 1.6 ** * Relative 1.4 *** * Entropy 1.2 *** * (11.2 bits) 0.9 **** ** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCACATCC consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:11907531-11907611 32 1.00e-05 tcctatttgt ccacatcc tctccagcac chr16:53365054-53365134 15 1.00e-05 tcctatttcc ccacatcc tctccagcac chr21:35730322-35730402 42 1.00e-05 tccacttagc ccacatcc tcaccaacac chr2:28882173-28882253 23 1.00e-05 tccagttctc ccacatcc tcaccaacac chr14:69265500-69265580 12 1.00e-05 tccactagct ccacatcc tcaccagcac chr12:83602995-83603075 3 1.00e-05 ct ccacatcc tctccagcac chr7:155479783-155479863 32 1.00e-05 tcctatttgt ccacatcc tctccagcac chr22:29066828-29066908 5 1.00e-05 ttct ccacatcc tcaccagtac chr22:22527771-22527851 35 1.00e-05 tcccgtttct ccacatcc tctccagcac chr6:43850592-43850672 21 1.00e-05 cacactttct ccacatcc tctccagcac chr2:121920621-121920701 16 1.00e-05 tgcctttcct ccacatcc tcaccaacac chr17:38485296-38485376 12 1.00e-05 tccaatttct ccacatcc tcgccagtac chr9:100098078-100098158 23 1.00e-05 tcttatttcc ccacatcc tctccagcac chr1:90242997-90243077 3 1.00e-05 ac ccacatcc tctccagcac chr22:17115019-17115099 14 1.00e-05 ttcaatttct ccacatcc tctccagcac chr7:131588276-131588356 12 1.00e-05 tccagtttct ccacatcc tcaccaacac chr3:100390008-100390088 28 1.00e-05 tcctgtttct ccacatcc tctccagcat chr2:234319977-234320057 3 1.00e-05 ct ccacatcc tcaccaacac chr1:17515544-17515624 18 1.00e-05 tctatttgtt ccacatcc acatcgccaa chr7:106077533-106077613 22 1.00e-05 tcctatttcc ccacatcc tctccagcac chr2:232249814-232249894 22 1.00e-05 tccagttgct ccacatcc tcaccaacac chr19:13433365-13433445 13 1.00e-05 ccccgtttcc ccacatcc ttgccagcac chr7:156702714-156702794 17 1.00e-05 tcctatttct ccacatcc tctccagcac chr15:73769327-73769407 19 1.00e-05 tccacatgtt ccacatcc tcaccaacac chr5:153606825-153606905 30 1.00e-05 ttcagtttcc ccacatcc tcaccaacac chr3:142043528-142043608 51 2.46e-05 tcctatttcc ccatatcc tctccagcac chr3:4689242-4689322 27 2.46e-05 tctagttctt ccatatcc ttaccaacac chr20:29465308-29465388 16 2.46e-05 tcctatttct ccatatcc tctccagcac chr11:46982739-46982819 22 2.46e-05 tctaatttct ccatatcc tttccaacac chr4:110782596-110782676 20 2.46e-05 tctggttgct ccatatcc tcaccaacac chr2:178314056-178314136 7 2.46e-05 gtttct ccatatcc ttgccaatac chr20:36350364-36350444 22 2.46e-05 tcttgtttcc ccatatcc tcaccaacac chr1:12791213-12791293 9 2.46e-05 ctatttct ccatatcc tctccagcat chr8:41533717-41533797 30 2.46e-05 tccagttccc ccatatcc tcaccaacac chr5:141827641-141827721 18 2.46e-05 ccatttcctc ccatatcc tcaccaacac chr9:131547878-131547958 25 3.84e-05 aaaagactga ccacatca agtattggtg chr10:105592762-10559284 11 5.58e-05 gtaagtgttc ccacttcc ccatattctc chr19:7849915-7849995 20 5.58e-05 gcaacagttc ccacttcc tcacatcttc chr17:25754672-25754752 17 6.31e-05 tcctatttct ccacctcc tctccagcac chr21:37551626-37551706 11 7.04e-05 tccagttctc ccccatcc tcttcaacac chr11:76683252-76683332 24 9.04e-05 agcaacttct ccatatca ttgccaatac chr15:85444901-85444981 38 9.04e-05 agaagactaa ccatatca agtgttggca chr6:135616368-135616448 32 9.04e-05 gaaggactga ccatatca agtattggtg chr18:46682371-46682451 34 1.05e-04 tctaatttct ccacatct tcaccaacac chr3:11280816-11280896 23 1.05e-04 tcttctttct ccacatct tcaccaacac chr9:95366448-95366528 17 1.05e-04 tccagttgtt ccacatct tcaccagaac chr5:142645718-142645798 17 1.05e-04 tccccttcct ccacatct tcaccaacac chr4:129067050-129067130 5 1.15e-04 aagA Ccataccc attacatcat chr3:52013877-52013957 16 1.30e-04 atgaaagtgc ccatttcc ccatgtctcc chr1:26044379-26044459 20 1.30e-04 tctagttgtt ccatttcc tcaccaacac chr22:38439633-38439713 6 1.30e-04 TGCTT CCATTTCC TAGGCTGGAG chr1:173209927-173210007 29 1.51e-04 gaacccagtc ccctatcc tcaccagcac chr11:85246014-85246094 11 1.70e-04 tcccttttct ccacaacc tcaccaacac chr15:90268021-90268101 15 1.70e-04 aaaagactga ccacacca agtgatggtg chr2:170439540-170439620 23 1.70e-04 tcctttttct ccacaacc tcaccagcac chr16:14369927-14370007 43 1.70e-04 aaaagactga ccacacca agtgttggcg chr1:33376023-33376103 8 2.06e-04 taagata ccacttca tattcactag chr1:243122912-243122992 21 2.06e-04 tccaatttcc ccatatct tcgccaacac chr5:107862950-107863030 15 2.06e-04 tttgatttct ccatatct ttgccaacac chr7:104867974-104868054 6 2.06e-04 aaata ccacttca tgtccagtag chr3:14828026-14828106 5 2.06e-04 aaca ccacttca cacccactag chr15:100126511-10012659 15 2.06e-04 tccagtttct ccatatct tcaccaacac chr7:129052480-129052560 16 2.06e-04 tctaatttct ccatatct tcaccaacac chr17:53898187-53898267 4 2.06e-04 atg ccacttca cacccattag chr7:39062550-39062630 34 2.06e-04 tctacttgct ccatatct tcaccagcac chr3:17690266-17690346 7 2.16e-04 gagaca ccacctca caccagtcaa chr16:85238154-85238234 17 2.16e-04 cagtcctcca ccacctca ccagcacttc chr9:130518082-130518162 11 2.33e-04 actggtgcgc ccactccc accagctctt chr5:815776-815856 52 2.33e-04 catctttcat ccccatca gcaatggatg chr4:56894498-56894578 28 2.61e-04 ttcctgttct ccacatcg tcaccaacac chr16:11447161-11447241 36 2.61e-04 agtcactgtt ccacatcg tctccagcac chr7:73077524-73077604 18 2.61e-04 tcctggtgct ccccttcc tcaccaacac chr8:105346881-105346961 35 3.08e-04 aaaagactaa ccatacca agtgttggtg chr17:20711040-20711120 14 3.08e-04 ttcaattttt ccacattc tctccaacac chr3:141772773-141772853 54 3.08e-04 aaaaaactga ccatacca agtgctggca chr16:74397985-74398065 26 3.08e-04 ctgacaatct ccccctcc ttctccaaca chr3:81818418-81818498 62 3.08e-04 cctctctTGC CCCCCTCC CCTTTGCCCC chr2:48356839-48356919 46 3.08e-04 gaaagactaa ccatacca agtgttggca chr9:116229630-116229710 22 3.08e-04 tttggttttt ccacattc cttaccaaca chr6:7359172-7359252 19 3.08e-04 tgcatttgct ccacattc tctccaagcc chr10:22469794-22469874 53 3.08e-04 aaaagactaa ccatacca agtgttggca chr2:63994604-63994684 16 3.08e-04 tcctgttgtt ccataacc tctccaaaac chr10:14959964-14960044 42 3.08e-04 aaaagtctaa ccatacca agtattggca chr7:132711064-132711144 31 3.39e-04 taatgatatg ccatttca aacccaccat chr1:32361225-32361305 4 3.69e-04 ata ccatctca caccagtcag chr1:201669517-201669597 1 3.69e-04 . ccatctca cggcagttag chr14:60947114-60947194 26 3.69e-04 gagtgaaact ccatctca aaaaataaaa chr6:48372845-48372925 4 4.19e-04 ttt ccattccc acaatcaagc chr11:120248838-12024891 30 4.19e-04 tttacttgtt ctacatcc tcatcaacac chr1:8186737-8186817 58 4.19e-04 CCACGCTGGG CCACCTCT CTTCTCCAAC chr10:46082031-46082111 34 4.19e-04 tctgattgct ctacatcc tcaccaacac chr20:5574829-5574909 35 4.57e-04 aattctcagg ccctaccc agacttattg chr17:33465359-33465439 29 4.57e-04 gattcccagg ccctaccc caggcccaat chr10:46085464-46085544 30 4.57e-04 tccaatttct ccacaaca tcaccaacac chr14:104238786-10423886 27 4.82e-04 tccaatttct ccctttcc tcaccaacac chr11:62205265-62205345 14 5.11e-04 tctagttgtt ccatattc tcagcaacac chr10:78248489-78248569 18 5.59e-04 tgcagttgct ccaaatcc tcaccaacac chr11:118318287-11831836 43 5.95e-04 agtgttgttt ccatttct aggttcctca chr5:60244729-60244809 29 6.46e-04 tccagttgtc ctatatcc ttatcaacac chr7:150568882-150568962 1 6.46e-04 . ccccacca ggatggctgt chr5:85849418-85849498 27 7.18e-04 aaaagataca ccataaca agtgttggca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:11907531-11907611 1e-05 31_[+4]_41 chr16:53365054-53365134 1e-05 14_[+4]_58 chr21:35730322-35730402 1e-05 41_[+4]_31 chr2:28882173-28882253 1e-05 22_[+4]_50 chr14:69265500-69265580 1e-05 11_[+4]_61 chr12:83602995-83603075 1e-05 2_[+4]_70 chr7:155479783-155479863 1e-05 31_[+4]_41 chr22:29066828-29066908 1e-05 4_[+4]_68 chr22:22527771-22527851 1e-05 34_[+4]_38 chr6:43850592-43850672 1e-05 20_[+4]_52 chr2:121920621-121920701 1e-05 15_[+4]_57 chr17:38485296-38485376 1e-05 11_[+4]_61 chr9:100098078-100098158 1e-05 22_[+4]_50 chr1:90242997-90243077 1e-05 2_[+4]_70 chr22:17115019-17115099 1e-05 13_[+4]_59 chr7:131588276-131588356 1e-05 11_[+4]_61 chr3:100390008-100390088 1e-05 27_[+4]_45 chr2:234319977-234320057 1e-05 2_[+4]_70 chr1:17515544-17515624 1e-05 17_[+4]_55 chr7:106077533-106077613 1e-05 21_[+4]_51 chr2:232249814-232249894 1e-05 21_[+4]_51 chr19:13433365-13433445 1e-05 12_[+4]_60 chr7:156702714-156702794 1e-05 16_[+4]_56 chr15:73769327-73769407 1e-05 18_[+4]_54 chr5:153606825-153606905 1e-05 29_[+4]_43 chr3:142043528-142043608 2.5e-05 50_[+4]_22 chr3:4689242-4689322 2.5e-05 26_[+4]_46 chr20:29465308-29465388 2.5e-05 15_[+4]_57 chr11:46982739-46982819 2.5e-05 21_[+4]_51 chr4:110782596-110782676 2.5e-05 19_[+4]_53 chr2:178314056-178314136 2.5e-05 6_[+4]_66 chr20:36350364-36350444 2.5e-05 21_[+4]_51 chr1:12791213-12791293 2.5e-05 8_[+4]_64 chr8:41533717-41533797 2.5e-05 29_[+4]_43 chr5:141827641-141827721 2.5e-05 17_[+4]_55 chr9:131547878-131547958 3.8e-05 24_[+4]_48 chr10:105592762-10559284 5.6e-05 10_[+4]_62 chr19:7849915-7849995 5.6e-05 19_[+4]_53 chr17:25754672-25754752 6.3e-05 16_[+4]_56 chr21:37551626-37551706 7e-05 10_[+4]_62 chr11:76683252-76683332 9e-05 23_[+4]_49 chr15:85444901-85444981 9e-05 37_[+4]_35 chr6:135616368-135616448 9e-05 31_[+4]_41 chr18:46682371-46682451 0.0001 33_[+4]_39 chr3:11280816-11280896 0.0001 22_[+4]_50 chr9:95366448-95366528 0.0001 16_[+4]_56 chr5:142645718-142645798 0.0001 16_[+4]_56 chr4:129067050-129067130 0.00011 4_[+4]_68 chr3:52013877-52013957 0.00013 15_[+4]_57 chr1:26044379-26044459 0.00013 19_[+4]_53 chr22:38439633-38439713 0.00013 5_[+4]_67 chr1:173209927-173210007 0.00015 28_[+4]_44 chr11:85246014-85246094 0.00017 10_[+4]_62 chr15:90268021-90268101 0.00017 14_[+4]_58 chr2:170439540-170439620 0.00017 22_[+4]_50 chr16:14369927-14370007 0.00017 42_[+4]_30 chr1:33376023-33376103 0.00021 7_[+4]_65 chr1:243122912-243122992 0.00021 20_[+4]_52 chr5:107862950-107863030 0.00021 14_[+4]_58 chr7:104867974-104868054 0.00021 5_[+4]_67 chr3:14828026-14828106 0.00021 4_[+4]_68 chr15:100126511-10012659 0.00021 14_[+4]_58 chr7:129052480-129052560 0.00021 15_[+4]_57 chr17:53898187-53898267 0.00021 3_[+4]_69 chr7:39062550-39062630 0.00021 33_[+4]_39 chr3:17690266-17690346 0.00022 6_[+4]_66 chr16:85238154-85238234 0.00022 16_[+4]_56 chr9:130518082-130518162 0.00023 10_[+4]_62 chr5:815776-815856 0.00023 51_[+4]_21 chr4:56894498-56894578 0.00026 27_[+4]_45 chr16:11447161-11447241 0.00026 35_[+4]_37 chr7:73077524-73077604 0.00026 17_[+4]_55 chr8:105346881-105346961 0.00031 34_[+4]_38 chr17:20711040-20711120 0.00031 13_[+4]_59 chr3:141772773-141772853 0.00031 53_[+4]_19 chr16:74397985-74398065 0.00031 25_[+4]_47 chr3:81818418-81818498 0.00031 61_[+4]_11 chr2:48356839-48356919 0.00031 45_[+4]_27 chr9:116229630-116229710 0.00031 21_[+4]_51 chr6:7359172-7359252 0.00031 18_[+4]_54 chr10:22469794-22469874 0.00031 52_[+4]_20 chr2:63994604-63994684 0.00031 15_[+4]_57 chr10:14959964-14960044 0.00031 41_[+4]_31 chr7:132711064-132711144 0.00034 30_[+4]_42 chr1:32361225-32361305 0.00037 3_[+4]_69 chr1:201669517-201669597 0.00037 [+4]_72 chr14:60947114-60947194 0.00037 25_[+4]_47 chr6:48372845-48372925 0.00042 3_[+4]_69 chr11:120248838-12024891 0.00042 29_[+4]_43 chr1:8186737-8186817 0.00042 57_[+4]_15 chr10:46082031-46082111 0.00042 33_[+4]_39 chr20:5574829-5574909 0.00046 34_[+4]_38 chr17:33465359-33465439 0.00046 28_[+4]_44 chr10:46085464-46085544 0.00046 29_[+4]_43 chr14:104238786-10423886 0.00048 26_[+4]_46 chr11:62205265-62205345 0.00051 13_[+4]_59 chr10:78248489-78248569 0.00056 17_[+4]_55 chr11:118318287-11831836 0.0006 42_[+4]_30 chr5:60244729-60244809 0.00065 28_[+4]_44 chr7:150568882-150568962 0.00065 [+4]_72 chr5:85849418-85849498 0.00072 26_[+4]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAYATCC width=8 seqs=101 chr6:11907531-11907611 ( 32) CCACATCC 1 chr16:53365054-53365134 ( 15) CCACATCC 1 chr21:35730322-35730402 ( 42) CCACATCC 1 chr2:28882173-28882253 ( 23) CCACATCC 1 chr14:69265500-69265580 ( 12) CCACATCC 1 chr12:83602995-83603075 ( 3) CCACATCC 1 chr7:155479783-155479863 ( 32) CCACATCC 1 chr22:29066828-29066908 ( 5) CCACATCC 1 chr22:22527771-22527851 ( 35) CCACATCC 1 chr6:43850592-43850672 ( 21) CCACATCC 1 chr2:121920621-121920701 ( 16) CCACATCC 1 chr17:38485296-38485376 ( 12) CCACATCC 1 chr9:100098078-100098158 ( 23) CCACATCC 1 chr1:90242997-90243077 ( 3) CCACATCC 1 chr22:17115019-17115099 ( 14) CCACATCC 1 chr7:131588276-131588356 ( 12) CCACATCC 1 chr3:100390008-100390088 ( 28) CCACATCC 1 chr2:234319977-234320057 ( 3) CCACATCC 1 chr1:17515544-17515624 ( 18) CCACATCC 1 chr7:106077533-106077613 ( 22) CCACATCC 1 chr2:232249814-232249894 ( 22) CCACATCC 1 chr19:13433365-13433445 ( 13) CCACATCC 1 chr7:156702714-156702794 ( 17) CCACATCC 1 chr15:73769327-73769407 ( 19) CCACATCC 1 chr5:153606825-153606905 ( 30) CCACATCC 1 chr3:142043528-142043608 ( 51) CCATATCC 1 chr3:4689242-4689322 ( 27) CCATATCC 1 chr20:29465308-29465388 ( 16) CCATATCC 1 chr11:46982739-46982819 ( 22) CCATATCC 1 chr4:110782596-110782676 ( 20) CCATATCC 1 chr2:178314056-178314136 ( 7) CCATATCC 1 chr20:36350364-36350444 ( 22) CCATATCC 1 chr1:12791213-12791293 ( 9) CCATATCC 1 chr8:41533717-41533797 ( 30) CCATATCC 1 chr5:141827641-141827721 ( 18) CCATATCC 1 chr9:131547878-131547958 ( 25) CCACATCA 1 chr10:105592762-10559284 ( 11) CCACTTCC 1 chr19:7849915-7849995 ( 20) CCACTTCC 1 chr17:25754672-25754752 ( 17) CCACCTCC 1 chr21:37551626-37551706 ( 11) CCCCATCC 1 chr11:76683252-76683332 ( 24) CCATATCA 1 chr15:85444901-85444981 ( 38) CCATATCA 1 chr6:135616368-135616448 ( 32) CCATATCA 1 chr18:46682371-46682451 ( 34) CCACATCT 1 chr3:11280816-11280896 ( 23) CCACATCT 1 chr9:95366448-95366528 ( 17) CCACATCT 1 chr5:142645718-142645798 ( 17) CCACATCT 1 chr4:129067050-129067130 ( 5) CCATACCC 1 chr3:52013877-52013957 ( 16) CCATTTCC 1 chr1:26044379-26044459 ( 20) CCATTTCC 1 chr22:38439633-38439713 ( 6) CCATTTCC 1 chr1:173209927-173210007 ( 29) CCCTATCC 1 chr11:85246014-85246094 ( 11) CCACAACC 1 chr15:90268021-90268101 ( 15) CCACACCA 1 chr2:170439540-170439620 ( 23) CCACAACC 1 chr16:14369927-14370007 ( 43) CCACACCA 1 chr1:33376023-33376103 ( 8) CCACTTCA 1 chr1:243122912-243122992 ( 21) CCATATCT 1 chr5:107862950-107863030 ( 15) CCATATCT 1 chr7:104867974-104868054 ( 6) CCACTTCA 1 chr3:14828026-14828106 ( 5) CCACTTCA 1 chr15:100126511-10012659 ( 15) CCATATCT 1 chr7:129052480-129052560 ( 16) CCATATCT 1 chr17:53898187-53898267 ( 4) CCACTTCA 1 chr7:39062550-39062630 ( 34) CCATATCT 1 chr3:17690266-17690346 ( 7) CCACCTCA 1 chr16:85238154-85238234 ( 17) CCACCTCA 1 chr9:130518082-130518162 ( 11) CCACTCCC 1 chr5:815776-815856 ( 52) CCCCATCA 1 chr4:56894498-56894578 ( 28) CCACATCG 1 chr16:11447161-11447241 ( 36) CCACATCG 1 chr7:73077524-73077604 ( 18) CCCCTTCC 1 chr8:105346881-105346961 ( 35) CCATACCA 1 chr17:20711040-20711120 ( 14) CCACATTC 1 chr3:141772773-141772853 ( 54) CCATACCA 1 chr16:74397985-74398065 ( 26) CCCCCTCC 1 chr3:81818418-81818498 ( 62) CCCCCTCC 1 chr2:48356839-48356919 ( 46) CCATACCA 1 chr9:116229630-116229710 ( 22) CCACATTC 1 chr6:7359172-7359252 ( 19) CCACATTC 1 chr10:22469794-22469874 ( 53) CCATACCA 1 chr2:63994604-63994684 ( 16) CCATAACC 1 chr10:14959964-14960044 ( 42) CCATACCA 1 chr7:132711064-132711144 ( 31) CCATTTCA 1 chr1:32361225-32361305 ( 4) CCATCTCA 1 chr1:201669517-201669597 ( 1) CCATCTCA 1 chr14:60947114-60947194 ( 26) CCATCTCA 1 chr6:48372845-48372925 ( 4) CCATTCCC 1 chr11:120248838-12024891 ( 30) CTACATCC 1 chr1:8186737-8186817 ( 58) CCACCTCT 1 chr10:46082031-46082111 ( 34) CTACATCC 1 chr20:5574829-5574909 ( 35) CCCTACCC 1 chr17:33465359-33465439 ( 29) CCCTACCC 1 chr10:46085464-46085544 ( 30) CCACAACA 1 chr14:104238786-10423886 ( 27) CCCTTTCC 1 chr11:62205265-62205345 ( 14) CCATATTC 1 chr10:78248489-78248569 ( 18) CCAAATCC 1 chr11:118318287-11831836 ( 43) CCATTTCT 1 chr5:60244729-60244809 ( 29) CTATATCC 1 chr7:150568882-150568962 ( 1) CCCCACCA 1 chr5:85849418-85849498 ( 27) CCATAACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.63471 E= 3.6e-058 -1330 226 -1330 -1330 -1330 222 -1330 -335 164 -107 -1330 -1330 -486 149 -1330 42 140 -123 -1330 -103 -254 -70 -1330 144 -1330 220 -1330 -294 -22 158 -334 -148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 101 E= 3.6e-058 0.000000 1.000000 0.000000 0.000000 0.000000 0.970297 0.000000 0.029703 0.900990 0.099010 0.000000 0.000000 0.009901 0.584158 0.000000 0.405941 0.762376 0.089109 0.000000 0.148515 0.049505 0.128713 0.000000 0.821782 0.000000 0.960396 0.000000 0.039604 0.247525 0.623762 0.019802 0.108911 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAYATCC MEME-4 regular expression -------------------------------------------------------------------------------- CCA[CT]ATC[CA] -------------------------------------------------------------------------------- Time 13.44 secs. ******************************************************************************** ******************************************************************************** MOTIF TTAAAAAG MEME-5 width = 8 sites = 65 llr = 574 E-value = 7.0e-049 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 11a8aa9: pos.-specific C :::::::: probability G :::2::1a matrix T 99:::::: bits 2.3 * 2.1 * 1.9 ** * 1.6 * ** * Relative 1.4 * * **** Entropy 1.2 ******** (12.7 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTAAAAAG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:220065475-220065555 27 3.64e-05 atggcgatca ttaaaaag tcaggaaaca chr4:145897032-145897112 10 3.64e-05 ttgataaaa ttaaaaag aaaaacaata chr19:2999319-2999399 33 3.64e-05 gacgggcata ttaaaaag acagccaata chr1:32361225-32361305 33 3.64e-05 atggctatta ttaaaaag tcaaataata chr12:104844628-10484470 29 3.64e-05 atggcaaaaa ttaaaaag attgacaaca chr3:186594852-186594932 22 3.64e-05 atgactaaaa ttaaaaag tctgaccatg chr21:36888743-36888823 22 3.64e-05 atggcgatca ttaaaaag tcaggaaaca chr1:201669517-201669597 30 3.64e-05 atggcgatca ttaaaaag tcaggaaaca chr6:87440762-87440842 27 3.64e-05 atggcgatca ttaaaaag tcaggaaaca chr2:58025816-58025896 1 3.64e-05 . ttaaaaag actaacaaca chr15:90268021-90268101 2 3.64e-05 a ttaaaaag actgaccaca chr4:129067050-129067130 27 3.64e-05 catcataaaa ttaaaaag tctgacaata chr2:96540739-96540819 21 3.64e-05 atggcaatca ttaaaaag tctgcaaaca chr22:43388255-43388335 4 3.64e-05 aaa ttaaaaag actacatgta chr2:172446794-172446874 1 3.64e-05 . ttaaaaag actgacaata chr5:42868379-42868459 2 3.64e-05 a ttaaaaag tcaggaaaca chr10:23231477-23231557 20 3.64e-05 gaaaggcaaa ttaaaaag actgataata chr7:158958218-158958298 1 3.64e-05 . ttaaaaag gctgatcata chr4:795665-795745 8 3.64e-05 tctgaaa ttaaaaag actgactgtg chr1:246217497-246217577 55 3.64e-05 atggctgaaa ttaaaaag actgacacta chr11:63346653-63346733 24 3.64e-05 atggcgatca ttaaaaag tcaggaaaca chr15:34878336-34878416 28 3.64e-05 atggccatca ttaaaaag tcaggaaaca chr1:45442089-45442169 15 3.64e-05 atggttaaaa ttaaaaag actgacaaca chr12:100514299-10051437 32 3.64e-05 atagctaaaa ttaaaaag gctaactata chr9:104671668-104671748 23 3.64e-05 gtggctaaaa ttaaaaag tataataata chr10:50344740-50344820 13 3.64e-05 taggtaagag ttaaaaag atggacaata chr10:35611730-35611810 15 3.64e-05 atggtgaaaa ttaaaaag actgataata chr2:159084774-159084854 28 3.64e-05 attgcaatca ttaaaaag tcaggaaaca chr6:157631112-157631192 26 3.64e-05 aatggctaaa ttaaaaag aacaacccta chr10:22469794-22469874 40 3.64e-05 attactaaaa ttaaaaag actaaccata chr19:48304680-48304760 13 3.64e-05 tcgacaaaca ttaaaaag tctcacaatc chr9:131547878-131547958 12 3.64e-05 atgtctaaga ttaaaaag actgaccaca chr16:17111465-17111545 8 3.64e-05 aaaaaag ttaaaaag tttaatcata chr12:111815389-11181546 23 3.64e-05 aaggccaaaa ttaaaaag actgacaaca chr7:104900804-104900884 8 3.64e-05 gtgatca ttaaaaag tcaggtaaca chr10:14959964-14960044 29 3.64e-05 atatttaaaa ttaaaaag tctaaccata chr15:39807298-39807378 22 3.64e-05 aagatttaaa ttaaaaag accaaccata chr3:17690266-17690346 35 6.16e-05 atggctagta ttagaaag tcgaaacata chr11:68392706-68392786 40 6.16e-05 atggcgatca ttagaaag tcaggaaaca chr15:69772440-69772520 28 6.16e-05 atggcaatta ttagaaag atggataacc chr13:100798940-10079902 25 6.16e-05 attaataaaa ttagaaag ataaatcatg chr2:48356839-48356919 33 6.16e-05 atggctaaaa ttagaaag actaaccata chr20:56626577-56626657 25 6.16e-05 cctactgtaa ttagaaag atgaacaata chr7:585203-585283 22 6.16e-05 actgccaaaa ttagaaag cctgattaca chr22:38439633-38439713 29 6.16e-05 TGGAGGTGAA TTAGAAAG ATGCATGGGA chr1:244452122-244452202 11 6.16e-05 ctggcaaaaa ttagaaag ttggacaata chr15:68675662-68675742 17 6.16e-05 TCAGAGAAAG TTAGAAAG AGGTATTTTA chr9:74499067-74499147 29 6.16e-05 aaagaaaaaa ttagaaag ctgagtatta chr20:36576385-36576465 13 1.21e-04 acggctggaa taaaaaag acaaacacta chr15:50559923-50560003 7 1.21e-04 ctataa taaaaaag atagataaca chr14:60947114-60947194 39 1.21e-04 tctcaaaaaa taaaaaag gtgaataaca chr7:132711064-132711144 51 1.21e-04 cccaccataa taaaaaag acaaacaata chr11:118318287-11831836 63 1.21e-04 gttcctcaac ttaaaagg gatgaggaga chr9:95767891-95767971 68 1.21e-04 ctttgcccat ttaaaagg agcat chr16:15539453-15539533 21 1.21e-04 aaggctaaaa ttaaaagg actgatcata chr6:35785439-35785519 27 1.21e-04 atgattataa taaaaaag gtgaataata chr5:85849418-85849498 14 1.56e-04 tctctaagaa ataaaaag atacaccata chr11:75458846-75458926 15 1.56e-04 gatggctaca ataaaaag tcaggtaata chr12:50009675-50009755 32 1.56e-04 gagtcagatg ataaaaag tgtgacaata chr8:105346881-105346961 22 1.80e-04 gtggctaaaa tgaaaaag actaaccata chr17:53898187-53898267 33 1.80e-04 atggctataa tgaaaaag atgaataata chr14:23694339-23694419 7 2.06e-04 ctttta ttcaaaag tcaggcaata chr1:6444367-6444447 33 2.06e-04 atggctagaa ttcaaaag atggataata chr6:135616368-135616448 19 2.48e-04 aatggctaaa ttagaagg actgaccata chr1:44249121-44249201 26 2.72e-04 TTGAGACTCG ATAGAAAG GTGAATCACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:220065475-220065555 3.6e-05 26_[+5]_46 chr4:145897032-145897112 3.6e-05 9_[+5]_63 chr19:2999319-2999399 3.6e-05 32_[+5]_40 chr1:32361225-32361305 3.6e-05 32_[+5]_40 chr12:104844628-10484470 3.6e-05 28_[+5]_44 chr3:186594852-186594932 3.6e-05 21_[+5]_51 chr21:36888743-36888823 3.6e-05 21_[+5]_51 chr1:201669517-201669597 3.6e-05 29_[+5]_43 chr6:87440762-87440842 3.6e-05 26_[+5]_46 chr2:58025816-58025896 3.6e-05 [+5]_72 chr15:90268021-90268101 3.6e-05 1_[+5]_71 chr4:129067050-129067130 3.6e-05 26_[+5]_46 chr2:96540739-96540819 3.6e-05 20_[+5]_52 chr22:43388255-43388335 3.6e-05 3_[+5]_69 chr2:172446794-172446874 3.6e-05 [+5]_72 chr5:42868379-42868459 3.6e-05 1_[+5]_71 chr10:23231477-23231557 3.6e-05 19_[+5]_53 chr7:158958218-158958298 3.6e-05 [+5]_72 chr4:795665-795745 3.6e-05 7_[+5]_65 chr1:246217497-246217577 3.6e-05 54_[+5]_18 chr11:63346653-63346733 3.6e-05 23_[+5]_49 chr15:34878336-34878416 3.6e-05 27_[+5]_45 chr1:45442089-45442169 3.6e-05 14_[+5]_58 chr12:100514299-10051437 3.6e-05 31_[+5]_41 chr9:104671668-104671748 3.6e-05 22_[+5]_50 chr10:50344740-50344820 3.6e-05 12_[+5]_60 chr10:35611730-35611810 3.6e-05 14_[+5]_58 chr2:159084774-159084854 3.6e-05 27_[+5]_45 chr6:157631112-157631192 3.6e-05 25_[+5]_47 chr10:22469794-22469874 3.6e-05 39_[+5]_33 chr19:48304680-48304760 3.6e-05 12_[+5]_60 chr9:131547878-131547958 3.6e-05 11_[+5]_61 chr16:17111465-17111545 3.6e-05 7_[+5]_65 chr12:111815389-11181546 3.6e-05 22_[+5]_50 chr7:104900804-104900884 3.6e-05 7_[+5]_65 chr10:14959964-14960044 3.6e-05 28_[+5]_44 chr15:39807298-39807378 3.6e-05 21_[+5]_51 chr3:17690266-17690346 6.2e-05 34_[+5]_38 chr11:68392706-68392786 6.2e-05 39_[+5]_33 chr15:69772440-69772520 6.2e-05 27_[+5]_45 chr13:100798940-10079902 6.2e-05 24_[+5]_48 chr2:48356839-48356919 6.2e-05 32_[+5]_40 chr20:56626577-56626657 6.2e-05 24_[+5]_48 chr7:585203-585283 6.2e-05 21_[+5]_51 chr22:38439633-38439713 6.2e-05 28_[+5]_44 chr1:244452122-244452202 6.2e-05 10_[+5]_62 chr15:68675662-68675742 6.2e-05 16_[+5]_56 chr9:74499067-74499147 6.2e-05 28_[+5]_44 chr20:36576385-36576465 0.00012 12_[+5]_60 chr15:50559923-50560003 0.00012 6_[+5]_66 chr14:60947114-60947194 0.00012 38_[+5]_34 chr7:132711064-132711144 0.00012 50_[+5]_22 chr11:118318287-11831836 0.00012 62_[+5]_10 chr9:95767891-95767971 0.00012 67_[+5]_5 chr16:15539453-15539533 0.00012 20_[+5]_52 chr6:35785439-35785519 0.00012 26_[+5]_46 chr5:85849418-85849498 0.00016 13_[+5]_59 chr11:75458846-75458926 0.00016 14_[+5]_58 chr12:50009675-50009755 0.00016 31_[+5]_41 chr8:105346881-105346961 0.00018 21_[+5]_51 chr17:53898187-53898267 0.00018 32_[+5]_40 chr14:23694339-23694419 0.00021 6_[+5]_66 chr1:6444367-6444447 0.00021 32_[+5]_40 chr6:135616368-135616448 0.00025 18_[+5]_54 chr1:44249121-44249201 0.00027 25_[+5]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTAAAAAG width=8 seqs=65 chr1:220065475-220065555 ( 27) TTAAAAAG 1 chr4:145897032-145897112 ( 10) TTAAAAAG 1 chr19:2999319-2999399 ( 33) TTAAAAAG 1 chr1:32361225-32361305 ( 33) TTAAAAAG 1 chr12:104844628-10484470 ( 29) TTAAAAAG 1 chr3:186594852-186594932 ( 22) TTAAAAAG 1 chr21:36888743-36888823 ( 22) TTAAAAAG 1 chr1:201669517-201669597 ( 30) TTAAAAAG 1 chr6:87440762-87440842 ( 27) TTAAAAAG 1 chr2:58025816-58025896 ( 1) TTAAAAAG 1 chr15:90268021-90268101 ( 2) TTAAAAAG 1 chr4:129067050-129067130 ( 27) TTAAAAAG 1 chr2:96540739-96540819 ( 21) TTAAAAAG 1 chr22:43388255-43388335 ( 4) TTAAAAAG 1 chr2:172446794-172446874 ( 1) TTAAAAAG 1 chr5:42868379-42868459 ( 2) TTAAAAAG 1 chr10:23231477-23231557 ( 20) TTAAAAAG 1 chr7:158958218-158958298 ( 1) TTAAAAAG 1 chr4:795665-795745 ( 8) TTAAAAAG 1 chr1:246217497-246217577 ( 55) TTAAAAAG 1 chr11:63346653-63346733 ( 24) TTAAAAAG 1 chr15:34878336-34878416 ( 28) TTAAAAAG 1 chr1:45442089-45442169 ( 15) TTAAAAAG 1 chr12:100514299-10051437 ( 32) TTAAAAAG 1 chr9:104671668-104671748 ( 23) TTAAAAAG 1 chr10:50344740-50344820 ( 13) TTAAAAAG 1 chr10:35611730-35611810 ( 15) TTAAAAAG 1 chr2:159084774-159084854 ( 28) TTAAAAAG 1 chr6:157631112-157631192 ( 26) TTAAAAAG 1 chr10:22469794-22469874 ( 40) TTAAAAAG 1 chr19:48304680-48304760 ( 13) TTAAAAAG 1 chr9:131547878-131547958 ( 12) TTAAAAAG 1 chr16:17111465-17111545 ( 8) TTAAAAAG 1 chr12:111815389-11181546 ( 23) TTAAAAAG 1 chr7:104900804-104900884 ( 8) TTAAAAAG 1 chr10:14959964-14960044 ( 29) TTAAAAAG 1 chr15:39807298-39807378 ( 22) TTAAAAAG 1 chr3:17690266-17690346 ( 35) TTAGAAAG 1 chr11:68392706-68392786 ( 40) TTAGAAAG 1 chr15:69772440-69772520 ( 28) TTAGAAAG 1 chr13:100798940-10079902 ( 25) TTAGAAAG 1 chr2:48356839-48356919 ( 33) TTAGAAAG 1 chr20:56626577-56626657 ( 25) TTAGAAAG 1 chr7:585203-585283 ( 22) TTAGAAAG 1 chr22:38439633-38439713 ( 29) TTAGAAAG 1 chr1:244452122-244452202 ( 11) TTAGAAAG 1 chr15:68675662-68675742 ( 17) TTAGAAAG 1 chr9:74499067-74499147 ( 29) TTAGAAAG 1 chr20:36576385-36576465 ( 13) TAAAAAAG 1 chr15:50559923-50560003 ( 7) TAAAAAAG 1 chr14:60947114-60947194 ( 39) TAAAAAAG 1 chr7:132711064-132711144 ( 51) TAAAAAAG 1 chr11:118318287-11831836 ( 63) TTAAAAGG 1 chr9:95767891-95767971 ( 68) TTAAAAGG 1 chr16:15539453-15539533 ( 21) TTAAAAGG 1 chr6:35785439-35785519 ( 27) TAAAAAAG 1 chr5:85849418-85849498 ( 14) ATAAAAAG 1 chr11:75458846-75458926 ( 15) ATAAAAAG 1 chr12:50009675-50009755 ( 32) ATAAAAAG 1 chr8:105346881-105346961 ( 22) TGAAAAAG 1 chr17:53898187-53898267 ( 33) TGAAAAAG 1 chr14:23694339-23694419 ( 7) TTCAAAAG 1 chr1:6444367-6444447 ( 33) TTCAAAAG 1 chr6:135616368-135616448 ( 19) TTAGAAGG 1 chr1:44249121-44249201 ( 26) ATAGAAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.14602 E= 7.0e-049 -223 -1267 -1267 163 -190 -1267 -270 156 175 -276 -1267 -1267 147 -1267 0 -1267 180 -1267 -1267 -1267 180 -1267 -1267 -1267 170 -1267 -170 -1267 -1267 -1267 232 -1267 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 65 E= 7.0e-049 0.061538 0.000000 0.000000 0.938462 0.076923 0.000000 0.030769 0.892308 0.969231 0.030769 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.938462 0.000000 0.061538 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAAAAAG MEME-5 regular expression -------------------------------------------------------------------------------- TTA[AG]AAAG -------------------------------------------------------------------------------- Time 16.02 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:73077524-73077604 1.27e-04 28_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 23 chr14:105766059-10576613 5.79e-03 29_[+2(2.17e-05)]_43 chr15:39807298-39807378 8.30e-04 21_[+5(3.64e-05)]_51 chr18:4022931-4023011 6.57e-02 80 chr7:39062550-39062630 4.89e-04 44_[+1(2.34e-05)]_28 chr9:74499067-74499147 9.72e-04 28_[+5(6.16e-05)]_13_[+2(2.17e-05)]_\ 23 chr15:68675662-68675742 1.60e-01 16_[+5(6.16e-05)]_56 chr5:153606825-153606905 5.20e-05 29_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 32 chr1:6444367-6444447 6.13e-02 80 chr12:50009675-50009755 9.85e-04 80 chr10:14959964-14960044 2.41e-04 28_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 23 chr6:135616368-135616448 2.12e-04 31_[+4(9.04e-05)]_[+2(5.52e-05)]_33 chr7:104900804-104900884 1.15e-03 7_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 44 chr2:63994604-63994684 7.88e-04 47_[+3(4.43e-05)]_25 chr11:85999984-86000064 2.23e-02 80 chr3:37460030-37460110 2.04e-03 42_[+3(4.43e-05)]_30 chr9:140650136-140650216 2.77e-03 35_[+1(2.34e-05)]_13_[+3(4.43e-05)]_\ 16 chrX:129135449-129135529 1.77e-01 80 chr3:167362575-167362655 8.23e-02 51_[+3(4.43e-05)]_21 chr1:244452122-244452202 9.23e-03 10_[+5(6.16e-05)]_62 chr10:80713778-80713858 7.19e-01 80 chrX:14040279-14040359 2.05e-01 80 chr19:48365037-48365117 3.45e-04 42_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 9 chr8:129565627-129565707 2.84e-01 80 chr15:73769327-73769407 8.23e-07 18_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 13_[+3(4.43e-05)]_22 chr6:35785439-35785519 5.26e-03 47_[+2(1.28e-05)]_25 chr16:14369927-14370007 3.26e-04 50_[+2(1.28e-05)]_22 chr12:111815389-11181546 1.32e-04 7_[+5(6.16e-05)]_7_[+5(3.64e-05)]_\ 13_[+2(2.17e-05)]_29 chr22:38439633-38439713 3.85e-03 28_[+5(6.16e-05)]_44 chr12:697987-698067 6.71e-03 46_[+2(1.28e-05)]_26 chr7:585203-585283 1.05e-03 21_[+5(6.16e-05)]_13_[+2(2.17e-05)]_\ 30 chr7:156702714-156702794 2.93e-05 16_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_24 chr22:32986632-32986712 1.04e-03 24_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 27 chr16:69851947-69852027 4.64e-04 61_[+3(4.43e-05)]_11 chr19:8750353-8750433 7.33e-02 9_[+2(5.52e-05)]_63 chr19:13433365-13433445 3.38e-04 12_[+4(1.00e-05)]_3_[+1(2.34e-05)]_\ 49 chr9:91908130-91908210 2.22e-03 25_[+1(1.38e-05)]_13_[+3(7.48e-05)]_\ 26 chr16:17111465-17111545 1.37e-03 7_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 44 chr17:53898187-53898267 5.62e-04 53_[+2(1.28e-05)]_19 chr10:46082031-46082111 4.77e-05 44_[+1(1.38e-05)]_28 chr2:220255598-220255678 4.14e-02 41_[+2(1.28e-05)]_31 chr2:232249814-232249894 1.60e-05 21_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 13_[+3(7.48e-05)]_19 chr19:10033595-10033675 8.29e-04 48_[+2(1.28e-05)]_24 chr9:131547878-131547958 1.02e-05 11_[+5(3.64e-05)]_5_[+4(3.84e-05)]_\ [+2(5.52e-05)]_40 chr15:101675167-10167524 9.42e-05 38_[+1(2.34e-05)]_1_[+2(8.73e-05)]_\ 25 chr7:106077533-106077613 5.68e-06 21_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_19 chr1:17515544-17515624 1.20e-06 17_[+4(1.00e-05)]_6_[+1(1.38e-05)]_\ 13_[+3(4.43e-05)]_20 chr19:58657371-58657451 4.33e-01 80 chr16:15539453-15539533 3.30e-03 41_[+2(2.17e-05)]_31 chr7:129052480-129052560 4.46e-04 26_[+1(1.38e-05)]_46 chr19:48304680-48304760 2.19e-03 12_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 39 chr5:1215963-1216043 1.85e-02 35_[+1(1.38e-05)]_37 chr6:90654700-90654780 3.98e-02 42_[+2(1.28e-05)]_30 chr10:46085464-46085544 1.26e-03 40_[+1(1.38e-05)]_32 chr10:22469794-22469874 4.22e-05 39_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 12 chr6:157631112-157631192 3.79e-02 25_[+5(3.64e-05)]_47 chr2:234319977-234320057 1.27e-05 2_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 13_[+3(4.43e-05)]_38 chr5:815776-815856 6.65e-02 80 chr6:7359172-7359252 6.80e-03 50_[+3(4.43e-05)]_22 chr20:56626577-56626657 1.72e-03 24_[+5(6.16e-05)]_13_[+2(1.28e-05)]_\ 27 chr3:100390008-100390088 4.77e-04 27_[+4(1.00e-05)]_24_[+3(7.48e-05)]_\ 13 chr3:171223902-171223982 3.54e-05 19_[+1(7.86e-05)]_13_[+3(4.43e-05)]_\ 32 chr2:159084774-159084854 3.19e-03 27_[+5(3.64e-05)]_13_[+2(2.17e-05)]_\ 24 chr13:100107220-10010730 8.33e-03 34_[+1(1.38e-05)]_38 chr17:25754672-25754752 1.26e-04 16_[+4(6.31e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_7_[+3(7.48e-05)]_9 chr15:85444901-85444981 1.16e-03 37_[+4(9.04e-05)]_[+2(1.28e-05)]_27 chr5:141827641-141827721 2.19e-04 17_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 44 chr17:47058585-47058665 2.88e-04 27_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 24 chr12:125084307-12508438 1.03e-01 47_[+3(7.48e-05)]_25 chr9:95767891-95767971 5.84e-04 80 chr19:7849915-7849995 1.55e-05 19_[+4(5.58e-05)]_11_[+1(1.38e-05)]_\ 13_[+3(4.43e-05)]_13 chr8:103698260-103698340 9.25e-01 80 chr14:100971189-10097126 1.77e-04 25_[+1(1.38e-05)]_47 chr5:173167587-173167667 9.22e-01 80 chr10:35611730-35611810 2.76e-04 14_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 37 chr8:41533717-41533797 2.35e-06 29_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 13_[+3(4.43e-05)]_11 chr9:116229630-116229710 1.11e-04 33_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 18 chr7:70107045-70107125 4.22e-02 80 chr10:50344740-50344820 3.90e-04 12_[+5(3.64e-05)]_13_[+2(2.17e-05)]_\ 39 chr10:105592762-10559284 7.50e-05 10_[+4(5.58e-05)]_11_[+1(1.38e-05)]_\ 27_[+3(7.48e-05)]_8 chr16:85238154-85238234 1.40e-03 24_[+1(2.34e-05)]_48 chr9:104671668-104671748 6.34e-03 22_[+5(3.64e-05)]_50 chr12:100514299-10051437 7.52e-04 31_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 20 chr14:104238786-10423886 1.39e-04 37_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 14 chr15:100126511-10012659 1.52e-04 25_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 26 chr7:149366346-149366426 1.44e-01 80 chr1:12791213-12791293 2.01e-03 8_[+4(2.46e-05)]_24_[+3(4.43e-05)]_\ 32 chr1:45442089-45442169 5.75e-04 14_[+5(3.64e-05)]_58 chr15:34878336-34878416 4.07e-03 27_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 24 chr8:41435110-41435190 2.35e-01 80 chr7:16433610-16433690 1.09e-01 80 chr5:142645718-142645798 4.00e-05 27_[+1(1.38e-05)]_45 chr7:131588276-131588356 1.58e-04 11_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 50 chr21:35080328-35080408 4.44e-03 6_[+1(1.38e-05)]_66 chr11:63346653-63346733 3.64e-03 23_[+5(3.64e-05)]_13_[+2(2.17e-05)]_\ 28 chr22:17115019-17115099 2.93e-05 13_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_27 chr9:131984336-131984416 9.80e-01 80 chr2:48356839-48356919 1.20e-04 32_[+5(6.16e-05)]_13_[+2(1.28e-05)]_\ 19 chr1:8186737-8186817 9.73e-03 70_[+1(1.38e-05)]_2 chr9:95366448-95366528 2.27e-04 80 chr3:11280816-11280896 8.14e-05 33_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 18 chr1:26044379-26044459 7.91e-05 30_[+1(1.38e-05)]_19_[+3(4.43e-05)]_\ 15 chr3:81818418-81818498 4.05e-01 80 chr1:246217497-246217577 2.58e-02 54_[+5(3.64e-05)]_18 chr4:795665-795745 1.25e-03 7_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 44 chr20:36350364-36350444 3.70e-04 21_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 40 chr6:155823678-155823758 1.14e-03 26_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 25 chr13:100798940-10079902 5.11e-04 24_[+5(6.16e-05)]_24_[+2(1.28e-05)]_\ 16 chr9:130518082-130518162 4.51e-02 80 chr17:33465359-33465439 4.60e-02 80 chrX:39896805-39896885 7.04e-04 26_[+1(1.38e-05)]_46 chr11:75458846-75458926 1.25e-03 35_[+2(8.73e-05)]_37 chr14:23694339-23694419 8.63e-03 27_[+2(2.17e-05)]_45 chr7:158958218-158958298 2.04e-03 [+5(3.64e-05)]_72 chr21:40739865-40739945 1.42e-01 11_[+2(5.52e-05)]_61 chr7:132454179-132454259 1.47e-02 49_[+1(2.34e-05)]_23 chr1:90242997-90243077 1.87e-05 2_[+4(1.00e-05)]_3_[+1(2.34e-05)]_\ 13_[+3(4.43e-05)]_38 chr10:23231477-23231557 6.46e-04 19_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 32 chr18:2319755-2319835 5.88e-03 28_[+2(1.28e-05)]_44 chr10:95340105-95340185 2.04e-02 80 chr14:31694154-31694234 5.93e-04 35_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 16 chr1:167771641-167771721 1.77e-03 22_[+1(1.38e-05)]_50 chr20:5574829-5574909 3.17e-02 80 chr1:153688865-153688945 3.35e-04 36_[+1(1.38e-05)]_36 chr9:100098078-100098158 1.04e-05 22_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_18 chr1:246056482-246056562 5.22e-02 32_[+2(2.17e-05)]_40 chr10:6302973-6303053 1.64e-02 52_[+3(7.48e-05)]_20 chr2:178314056-178314136 3.74e-05 6_[+4(2.46e-05)]_3_[+1(7.86e-05)]_\ 13_[+3(4.43e-05)]_34 chr11:118318287-11831836 7.20e-04 32_[+2(8.73e-05)]_40 chr5:42868379-42868459 1.15e-03 1_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 50 chr3:141563021-141563101 2.50e-01 80 chr17:38485296-38485376 3.38e-04 11_[+4(1.00e-05)]_61 chr19:40594374-40594454 2.81e-02 40_[+2(5.52e-05)]_32 chr16:11447161-11447241 1.47e-04 46_[+1(2.34e-05)]_1_[+2(8.73e-05)]_\ 17 chr2:170439540-170439620 2.67e-04 33_[+1(3.95e-05)]_13_[+3(4.43e-05)]_\ 18 chr2:121920621-121920701 5.08e-06 15_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 13_[+3(7.48e-05)]_25 chr17:43409611-43409691 1.20e-01 80 chr15:96807782-96807862 9.46e-01 80 chr4:110782596-110782676 8.62e-06 19_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 42 chrX:119701998-119702078 1.72e-01 80 chr3:14828026-14828106 7.37e-04 53_[+2(1.28e-05)]_19 chr11:46982739-46982819 8.33e-05 21_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 40 chr6:43850592-43850672 3.64e-05 20_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_20 chr1:173209927-173210007 6.44e-04 39_[+1(2.34e-05)]_33 chr7:100506300-100506380 2.39e-02 43_[+2(1.28e-05)]_29 chr16:67741258-67741338 1.12e-01 80 chr7:132711064-132711144 1.29e-04 71_[+2(1.28e-05)]_1 chr2:26247294-26247374 1.53e-03 33_[+1(1.38e-05)]_13_[+3(7.48e-05)]_\ 18 chr1:44249121-44249201 5.94e-02 80 chr16:74397985-74398065 1.55e-03 37_[+1(1.38e-05)]_35 chr8:143504118-143504198 1.11e-02 22_[+2(1.28e-05)]_50 chr2:172446794-172446874 2.69e-04 [+5(3.64e-05)]_13_[+2(1.28e-05)]_51 chr15:69772440-69772520 4.94e-02 27_[+5(6.16e-05)]_45 chr1:9430417-9430497 9.19e-02 80 chr22:43388255-43388335 1.18e-03 3_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 25_[+2(2.17e-05)]_15 chr22:22527771-22527851 1.17e-05 34_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_6 chr7:150568882-150568962 4.70e-03 41_[+2(1.28e-05)]_31 chr11:76683252-76683332 7.90e-04 23_[+4(9.04e-05)]_3_[+1(7.86e-05)]_\ 38 chr22:29066828-29066908 5.11e-05 4_[+4(1.00e-05)]_24_[+3(4.43e-05)]_\ 36 chr19:36447318-36447398 1.36e-03 10_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 41 chr12:114051386-11405146 2.86e-02 30_[+2(1.28e-05)]_42 chr5:60244729-60244809 1.52e-03 60_[+3(4.43e-05)]_12 chr19:44443883-44443963 9.47e-05 20_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 31 chr2:96540739-96540819 3.67e-04 20_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 31 chr11:3633391-3633471 3.85e-02 7_[+2(1.28e-05)]_65 chr2:26232600-26232680 9.77e-03 45_[+2(1.28e-05)]_27 chr1:20673062-20673142 7.86e-03 64_[+1(1.38e-05)]_8 chr6:11864148-11864228 1.55e-02 11_[+1(1.38e-05)]_61 chr4:129067050-129067130 2.65e-04 26_[+5(3.64e-05)]_46 chr1:3259675-3259755 8.22e-02 80 chr17:60301089-60301169 8.89e-03 43_[+2(1.28e-05)]_29 chr20:29465308-29465388 5.99e-05 15_[+4(2.46e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_25 chr3:4689242-4689322 1.95e-05 26_[+4(2.46e-05)]_3_[+1(1.38e-05)]_\ 35 chr14:60947114-60947194 3.02e-04 59_[+2(1.28e-05)]_13 chr18:46682371-46682451 1.63e-03 44_[+1(1.38e-05)]_28 chr15:90268021-90268101 2.42e-04 1_[+5(3.64e-05)]_71 chr2:58025816-58025896 7.45e-04 [+5(3.64e-05)]_13_[+2(1.28e-05)]_51 chr2:11975805-11975885 1.62e-01 80 chr6:87440762-87440842 3.19e-03 26_[+5(3.64e-05)]_13_[+2(2.17e-05)]_\ 25 chr11:120248838-12024891 4.63e-04 61_[+3(4.43e-05)]_11 chr2:85916014-85916094 4.64e-01 80 chr15:29063516-29063596 6.18e-01 80 chr7:104867974-104868054 2.71e-03 51_[+2(1.28e-05)]_21 chr1:36012380-36012460 1.81e-02 42_[+2(1.28e-05)]_30 chr17:11813986-11814066 3.22e-02 36_[+1(1.38e-05)]_36 chr10:105365787-10536586 9.63e-01 80 chr15:50559923-50560003 1.03e-02 27_[+2(5.52e-05)]_45 chr7:155479783-155479863 5.78e-06 31_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_9 chr9:139698479-139698559 1.82e-01 80 chr11:85246014-85246094 9.91e-05 21_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 30 chr12:83602995-83603075 1.63e-05 2_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_38 chr1:201669517-201669597 3.98e-04 29_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 22 chr14:69265500-69265580 2.83e-04 11_[+4(1.00e-05)]_3_[+1(2.34e-05)]_\ 50 chr6:33869993-33870073 4.01e-01 80 chr17:2095782-2095862 1.10e-02 80 chr2:160102982-160103062 1.03e-02 39_[+2(2.17e-05)]_33 chr6:48372845-48372925 4.87e-03 37_[+1(1.38e-05)]_35 chr3:141772773-141772853 2.71e-03 61_[+2(2.17e-05)]_11 chr2:28882173-28882253 3.83e-06 22_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 9_[+3(4.43e-05)]_22 chr21:36888743-36888823 5.06e-03 21_[+5(3.64e-05)]_13_[+2(2.17e-05)]_\ 30 chr17:20711040-20711120 2.93e-03 24_[+1(1.38e-05)]_48 chr21:35730322-35730402 3.29e-05 41_[+4(1.00e-05)]_3_[+1(1.38e-05)]_\ 20 chr10:3427855-3427935 1.29e-03 24_[+2(1.28e-05)]_48 chr8:105346881-105346961 1.49e-04 42_[+2(1.28e-05)]_30 chr16:53365054-53365134 8.11e-05 14_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 47 chr6:141314789-141314869 3.40e-04 27_[+5(6.16e-05)]_7_[+5(6.16e-05)]_\ 13_[+2(1.28e-05)]_9 chr5:107862950-107863030 8.25e-04 25_[+1(1.38e-05)]_47 chr18:12578013-12578093 3.95e-02 40_[+2(5.52e-05)]_32 chr3:186594852-186594932 7.49e-04 21_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 30 chr11:68392706-68392786 9.11e-03 39_[+5(6.16e-05)]_13_[+2(5.52e-05)]_\ 12 chr10:78248489-78248569 2.21e-04 28_[+1(1.38e-05)]_13_[+3(4.43e-05)]_\ 23 chr17:47098774-47098854 5.04e-01 80 chr12:104844628-10484470 5.53e-06 28_[+5(3.64e-05)]_4_[+1(5.86e-05)]_\ 1_[+2(1.28e-05)]_23 chr17:13336464-13336544 1.53e-02 28_[+3(7.48e-05)]_44 chr11:72892923-72893003 2.04e-03 24_[+1(3.29e-05)]_13_[+3(4.43e-05)]_\ 27 chr5:55188449-55188529 3.26e-01 80 chr16:10734952-10735032 1.33e-03 50_[+3(4.43e-05)]_22 chr3:44313866-44313946 3.93e-03 24_[+1(2.34e-05)]_48 chr1:32361225-32361305 2.48e-03 32_[+5(3.64e-05)]_40 chr5:85849418-85849498 6.32e-04 34_[+2(1.28e-05)]_38 chr1:243122912-243122992 1.39e-03 31_[+1(1.38e-05)]_41 chr4:56894498-56894578 2.00e-04 38_[+1(1.38e-05)]_12_[+3(4.43e-05)]_\ 14 chr19:2999319-2999399 3.20e-04 32_[+5(3.64e-05)]_13_[+2(1.28e-05)]_\ 19 chr6:111360233-111360313 9.10e-01 80 chr6:11907531-11907611 5.68e-06 31_[+4(1.00e-05)]_3_[+1(3.95e-05)]_\ 13_[+3(4.43e-05)]_9 chr2:113474583-113474663 5.53e-02 13_[+3(4.43e-05)]_59 chr8:29629283-29629363 1.15e-02 69_[+3(7.48e-05)]_3 chr1:33376023-33376103 4.23e-03 57_[+2(2.17e-05)]_15 chr9:71311228-71311308 2.14e-03 40_[+1(1.38e-05)]_32 chr1:36302525-36302605 1.71e-02 4_[+1(1.38e-05)]_68 chr4:145897032-145897112 5.20e-03 9_[+5(3.64e-05)]_63 chr1:220065475-220065555 6.22e-03 26_[+5(3.64e-05)]_13_[+2(5.52e-05)]_\ 25 chr3:17690266-17690346 1.45e-03 34_[+5(6.16e-05)]_38 chr3:142043528-142043608 6.71e-04 50_[+4(2.46e-05)]_3_[+1(3.95e-05)]_\ 11 chr3:52013877-52013957 4.28e-04 34_[+1(1.38e-05)]_38 chr16:81837780-81837860 4.60e-02 80 chr20:48931615-48931695 1.21e-02 30_[+1(2.34e-05)]_42 chr11:62205265-62205345 4.63e-03 80 chr3:46234575-46234655 1.81e-02 35_[+2(1.28e-05)]_37 chr19:39889167-39889247 8.10e-03 80 chr10:49733047-49733127 8.45e-03 80 chr2:24278808-24278888 3.76e-03 22_[+1(1.38e-05)]_50 chr20:36576385-36576465 1.41e-03 33_[+2(8.73e-05)]_39 chr16:79727484-79727564 5.14e-04 14_[+1(1.38e-05)]_58 chr21:37551626-37551706 4.21e-04 10_[+4(7.04e-05)]_62 chr11:68749771-68749851 1.06e-02 33_[+1(1.38e-05)]_39 chr14:60721023-60721103 7.80e-01 80 chr16:14213821-14213901 3.93e-03 80 chr6:33965180-33965260 1.96e-03 52_[+2(8.73e-05)]_20 chr2:55032562-55032642 6.11e-03 49_[+3(4.43e-05)]_23 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************