******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF143.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:49416530-49416610 1.0000 80 chr19:49362005-49362085 1.0000 80 chr19:49310030-49310110 1.0000 80 chr19:55831279-55831359 1.0000 80 chr19:54396427-54396507 1.0000 80 chr19:54682369-54682449 1.0000 80 chr19:46027147-46027227 1.0000 80 chr19:54480865-54480945 1.0000 80 chr19:54411492-54411572 1.0000 80 chr19:55709057-55709137 1.0000 80 chr6:31866310-31866390 1.0000 80 chr2:27319261-27319341 1.0000 80 chr19:49486859-49486939 1.0000 80 chr19:55816998-55817078 1.0000 80 chr19:48922671-48922751 1.0000 80 chr19:49013930-49014010 1.0000 80 chr19:51142565-51142645 1.0000 80 chr19:49228264-49228344 1.0000 80 chr17:7118413-7118493 1.0000 80 chr19:49248613-49248693 1.0000 80 chr19:49385146-49385226 1.0000 80 chr11:46134679-46134759 1.0000 80 chr6:52929630-52929710 1.0000 80 chr19:54382689-54382769 1.0000 80 chr19:55690517-55690597 1.0000 80 chr6:10147347-10147427 1.0000 80 chr9:72435534-72435614 1.0000 80 chr1:154979439-154979519 1.0000 80 chr17:40559677-40559757 1.0000 80 chr19:38270214-38270294 1.0000 80 chr19:507895-507975 1.0000 80 chr4:104020997-104021077 1.0000 80 chr14:36295376-36295456 1.0000 80 chr19:55815807-55815887 1.0000 80 chr2:39005284-39005364 1.0000 80 chr19:55677446-55677526 1.0000 80 chr13:52157976-52158056 1.0000 80 chr1:10706565-10706645 1.0000 80 chr19:50651538-50651618 1.0000 80 chr1:147142662-147142742 1.0000 80 chr17:7358821-7358901 1.0000 80 chr19:49017223-49017303 1.0000 80 chr20:48732488-48732568 1.0000 80 chr8:124054111-124054191 1.0000 80 chr19:48907013-48907093 1.0000 80 chrX:149736803-149736883 1.0000 80 chr19:47942198-47942278 1.0000 80 chr13:31736502-31736582 1.0000 80 chr5:178157719-178157799 1.0000 80 chr9:99616830-99616910 1.0000 80 chr19:49422141-49422221 1.0000 80 chr6:6890960-6891040 1.0000 80 chr1:234812098-234812178 1.0000 80 chr2:23598478-23598558 1.0000 80 chr5:138775204-138775284 1.0000 80 chr3:69788441-69788521 1.0000 80 chrX:70315607-70315687 1.0000 80 chr10:72288704-72288784 1.0000 80 chr22:41840465-41840545 1.0000 80 chr6:44101522-44101602 1.0000 80 chr20:49084689-49084769 1.0000 80 chr19:44331374-44331454 1.0000 80 chr6:14800259-14800339 1.0000 80 chr17:7094948-7095028 1.0000 80 chr1:224544447-224544527 1.0000 80 chr1:47799895-47799975 1.0000 80 chr18:56806959-56807039 1.0000 80 chr4:7075467-7075547 1.0000 80 chr22:33300162-33300242 1.0000 80 chr14:81408130-81408210 1.0000 80 chr14:82000459-82000539 1.0000 80 chr11:134123307-13412338 1.0000 80 chr19:49404475-49404555 1.0000 80 chr12:32832079-32832159 1.0000 80 chr7:1465352-1465432 1.0000 80 chr12:49449920-49450000 1.0000 80 chr1:22755253-22755333 1.0000 80 chr16:29687574-29687654 1.0000 80 chr11:60681316-60681396 1.0000 80 chr2:217277077-217277157 1.0000 80 chr4:79575004-79575084 1.0000 80 chr6:157801084-157801164 1.0000 80 chr7:20257087-20257167 1.0000 80 chr9:101172668-101172748 1.0000 80 chr5:178286889-178286969 1.0000 80 chr16:46918121-46918201 1.0000 80 chr6:43215023-43215103 1.0000 80 chr16:33569517-33569597 1.0000 80 chr11:64387367-64387447 1.0000 80 chr19:7616377-7616457 1.0000 80 chr9:37920529-37920609 1.0000 80 chr14:59655245-59655325 1.0000 80 chr10:38383162-38383242 1.0000 80 chr19:49250488-49250568 1.0000 80 chr4:185265099-185265179 1.0000 80 chr19:55708325-55708405 1.0000 80 chr5:55008169-55008249 1.0000 80 chr6:15245626-15245706 1.0000 80 chr9:132346478-132346558 1.0000 80 chr13:30881217-30881297 1.0000 80 chr2:202316292-202316372 1.0000 80 chr20:23402134-23402214 1.0000 80 chr19:57946556-57946636 1.0000 80 chr22:29168600-29168680 1.0000 80 chr2:136288406-136288486 1.0000 80 chr19:38397749-38397829 1.0000 80 chr11:74109856-74109936 1.0000 80 chr16:31045654-31045734 1.0000 80 chr9:133003011-133003091 1.0000 80 chr17:7591572-7591652 1.0000 80 chr2:38892992-38893072 1.0000 80 chr4:8160670-8160750 1.0000 80 chr8:82755015-82755095 1.0000 80 chr12:110151312-11015139 1.0000 80 chr18:9913573-9913653 1.0000 80 chr1:31327139-31327219 1.0000 80 chr19:44488242-44488322 1.0000 80 chr2:74753493-74753573 1.0000 80 chr3:49435015-49435095 1.0000 80 chr1:20767420-20767500 1.0000 80 chr11:107436435-10743651 1.0000 80 chr2:86332681-86332761 1.0000 80 chr1:205744602-205744682 1.0000 80 chr20:21077065-21077145 1.0000 80 chr12:861514-861594 1.0000 80 chr17:38443831-38443911 1.0000 80 chr3:98241872-98241952 1.0000 80 chrX:106045769-106045849 1.0000 80 chr11:64456049-64456129 1.0000 80 chr2:54950536-54950616 1.0000 80 chrX:134478623-134478703 1.0000 80 chr9:15422715-15422795 1.0000 80 chr9:97021496-97021576 1.0000 80 chr3:141365812-141365892 1.0000 80 chr17:40075332-40075412 1.0000 80 chr19:49224361-49224441 1.0000 80 chr1:18779233-18779313 1.0000 80 chr7:150689942-150690022 1.0000 80 chr10:71754211-71754291 1.0000 80 chr11:73661981-73662061 1.0000 80 chr5:74807639-74807719 1.0000 80 chr17:72186455-72186535 1.0000 80 chr17:4634603-4634683 1.0000 80 chr15:75182310-75182390 1.0000 80 chr20:986451-986531 1.0000 80 chr13:33112985-33113065 1.0000 80 chr4:18023794-18023874 1.0000 80 chr16:68482612-68482692 1.0000 80 chr11:65635655-65635735 1.0000 80 chr19:48848302-48848382 1.0000 80 chr3:129409349-129409429 1.0000 80 chr19:44809191-44809271 1.0000 80 chr11:69614406-69614486 1.0000 80 chr12:56710133-56710213 1.0000 80 chr1:156052280-156052360 1.0000 80 chr19:48866434-48866514 1.0000 80 chr19:41084568-41084648 1.0000 80 chr4:6374781-6374861 1.0000 80 chr19:50836848-50836928 1.0000 80 chr10:73083348-73083428 1.0000 80 chr3:61235795-61235875 1.0000 80 chr19:51152940-51153020 1.0000 80 chr19:49851181-49851261 1.0000 80 chr19:50501072-50501152 1.0000 80 chr1:243419228-243419308 1.0000 80 chr19:19887287-19887367 1.0000 80 chr2:220150937-220151017 1.0000 80 chr2:26296438-26296518 1.0000 80 chr11:66035883-66035963 1.0000 80 chr16:74729859-74729939 1.0000 80 chr19:4304525-4304605 1.0000 80 chr4:2538121-2538201 1.0000 80 chr17:40273371-40273451 1.0000 80 chr10:104262578-10426265 1.0000 80 chr10:92631647-92631727 1.0000 80 chr12:133532880-13353296 1.0000 80 chr19:2456998-2457078 1.0000 80 chr3:49466718-49466798 1.0000 80 chr2:10552681-10552761 1.0000 80 chr11:113644472-11364455 1.0000 80 chr12:88535972-88536052 1.0000 80 chr2:241525743-241525823 1.0000 80 chr19:41571007-41571087 1.0000 80 chr10:43048344-43048424 1.0000 80 chr2:2617283-2617363 1.0000 80 chr4:56252366-56252446 1.0000 80 chr14:24701763-24701843 1.0000 80 chr18:71815680-71815760 1.0000 80 chr20:20693558-20693638 1.0000 80 chr17:17653424-17653504 1.0000 80 chr21:35402526-35402606 1.0000 80 chr17:19912564-19912644 1.0000 80 chr12:121488698-12148877 1.0000 80 chr16:58426726-58426806 1.0000 80 chr16:57728647-57728727 1.0000 80 chr3:183735751-183735831 1.0000 80 chr3:14361227-14361307 1.0000 80 chr19:50030969-50031049 1.0000 80 chr6:110501301-110501381 1.0000 80 chr19:14743226-14743306 1.0000 80 chr3:167452749-167452829 1.0000 80 chr4:174291896-174291976 1.0000 80 chr12:57623373-57623453 1.0000 80 chr13:26827955-26828035 1.0000 80 chr5:131526031-131526111 1.0000 80 chr15:41099689-41099769 1.0000 80 chr19:45988706-45988786 1.0000 80 chr15:40986899-40986979 1.0000 80 chr2:36845634-36845714 1.0000 80 chr19:10828064-10828144 1.0000 80 chr19:1095514-1095594 1.0000 80 chr10:44144321-44144401 1.0000 80 chr19:48832876-48832956 1.0000 80 chr1:17338465-17338545 1.0000 80 chr1:154842888-154842968 1.0000 80 chr12:119667749-11966782 1.0000 80 chr7:152887686-152887766 1.0000 80 chr16:9147098-9147178 1.0000 80 chr2:18741923-18742003 1.0000 80 chr16:30908468-30908548 1.0000 80 chr3:4344940-4345020 1.0000 80 chr10:103892659-10389273 1.0000 80 chr12:117330310-11733039 1.0000 80 chr19:37569234-37569314 1.0000 80 chr3:50388504-50388584 1.0000 80 chr11:125773098-12577317 1.0000 80 chr19:49148190-49148270 1.0000 80 chr1:15288464-15288544 1.0000 80 chr16:81779949-81780029 1.0000 80 chr21:35434463-35434543 1.0000 80 chr11:69444969-69445049 1.0000 80 chr5:153211671-153211751 1.0000 80 chr16:58664407-58664487 1.0000 80 chr12:124594397-12459447 1.0000 80 chr3:13933313-13933393 1.0000 80 chr4:185585799-185585879 1.0000 80 chr19:1021271-1021351 1.0000 80 chr15:52121768-52121848 1.0000 80 chr19:4066019-4066099 1.0000 80 chr1:35177274-35177354 1.0000 80 chr6:41703397-41703477 1.0000 80 chr1:156308548-156308628 1.0000 80 chr4:6585013-6585093 1.0000 80 chr16:87009103-87009183 1.0000 80 chr10:126490305-12649038 1.0000 80 chr19:49947073-49947153 1.0000 80 chr19:56915619-56915699 1.0000 80 chr11:66138868-66138948 1.0000 80 chr1:155990742-155990822 1.0000 80 chr17:21226449-21226529 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZNF143/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZNF143.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.21 C 0.289 G 0.291 T 0.21 Background letter frequencies (from file dataset with add-one prior applied): A 0.21 C 0.289 G 0.291 T 0.21 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TRYAGTTC MEME-1 width = 8 sites = 208 llr = 1490 E-value = 2.0e-185 ******************************************************************************** -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :4:a1::: pos.-specific C ::5::237 probability G :6::6::: matrix T a:5:3873 bits 2.3 * * 2.0 * * 1.8 * * 1.6 * * * Relative 1.4 * * * Entropy 1.1 * * * * (10.3 bits) 0.9 **** *** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGTAGTTC consensus AC T CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:155990742-155990822 58 9.99e-06 TTGTGGGAGT TGTAGTTC TTGGAGAAGC chr11:66138868-66138948 70 9.99e-06 TGATGGGAAT TGTAGTTC GAT chr19:49947073-49947153 65 9.99e-06 CGCTGGGAGA TGTAGTTC TCTGAGAC chr1:35177274-35177354 59 9.99e-06 tgctgggaaa tgtagttc caggaagaaa chr19:49148190-49148270 70 9.99e-06 CCGTGGGAGT TGTAGTTC TTT chr17:4634603-4634683 17 9.99e-06 CCCTGGGAGT TGTAGTTC ATCAAGCGGA chr19:49224361-49224441 68 9.99e-06 TGATGGAAGT TGTAGTTC AGACG chr9:97021496-97021576 63 9.99e-06 GTCTGGGTAG TGTAGTTC CGTGCCCAGG chr20:21077065-21077145 63 9.99e-06 ggctgggaaa tgtagttc agctggtcag chr16:31045654-31045734 47 9.99e-06 TTGTGGGGGT TGTAGTTC CACGCAGGTG chr11:74109856-74109936 13 9.99e-06 TCACGGGAGT TGTAGTTC TTTCCTTTGT chr6:15245626-15245706 58 9.99e-06 GGCTGGGAAT TGTAGTTC CCAGCTTCCG chr11:64387367-64387447 49 9.99e-06 TGATGGGAGT TGTAGTTC CTAAGCCATG chr16:46918121-46918201 30 9.99e-06 CTGTGGGACT TGTAGTTC GCGTCACTCT chr1:234812098-234812178 56 9.99e-06 tgctgggggt tgtagttc tcgtgtactc chr6:6890960-6891040 58 9.99e-06 acctgggaaa tgtagttc tcagaagaca chr5:178157719-178157799 61 9.99e-06 TTCGGGGAAG TGTAGTTC CATGCGTTTG chr19:49385146-49385226 71 9.99e-06 TGATGGGAGA TGTAGTTC CC chr19:49486859-49486939 69 9.99e-06 TTCTGGGAGT TGTAGTTC TCAC chr6:31866310-31866390 35 9.99e-06 TTCTGGGAAC TGTAGTTC TCTTTGGTTA chr19:54682369-54682449 70 9.99e-06 TGCTGGGAGA TGTAGTTC TGC chr16:68482612-68482692 9 1.72e-05 CTGGGACT TATAGTTC TTTAAGGACG chr12:88535972-88536052 29 3.10e-05 AATCCCAGAG TGCAGTTC TGCCTGAGGC chr19:51152940-51153020 22 3.10e-05 CATGAGCCTC TGCAGTTC CTTGGCCAAT chr1:15288464-15288544 58 5.54e-05 ttctgggaaa tgtagttt ctagctaggt chr2:18741923-18742003 59 5.54e-05 TGCTGGGACT TGTAGTTT CCCTCTGGGG chr1:154842888-154842968 59 5.54e-05 GACTGGGAAC TGTAGTTT TTGCTCCCCC chr19:48832876-48832956 56 5.54e-05 TGCTGGGACT TGTAGTTT TCAGTGGCTA chr19:1095514-1095594 64 5.54e-05 TCTCGGGAGT TGTAGTTT CCGTTCAAC chr19:10828064-10828144 48 5.54e-05 CTCTGGGACT TGTAGTTT TCCCCAGTGC chr16:58426726-58426806 66 5.54e-05 CTTTGGGATT TGTAGTTT TCGAGGA chr21:35402526-35402606 49 5.54e-05 agctgggaaa tgtagttt tcctgcatgc chr2:26296438-26296518 28 5.54e-05 gtctgggaaa tgtagttt gtaggctttc chr1:156052280-156052360 56 5.54e-05 TGCCGGGAGT TGTAGTTT CCCGCCCTTG chr19:44809191-44809271 64 5.54e-05 ACTCCTGGAC TACAGTTC CCAGAATGC chr17:72186455-72186535 63 5.54e-05 tgctgggata tgtagttt tattatgaac chr3:141365812-141365892 34 5.54e-05 gcctgggaaa tgtagttt gcaacctctc chr9:15422715-15422795 33 5.54e-05 TGCCGGGAAA TGTAGTTT CTGATGCCCT chr2:74753493-74753573 49 5.54e-05 TGCTGGGACT TGTAGTTT TGCAGCAGCT chr2:202316292-202316372 64 5.54e-05 TGCTGGGAAT TGTAGTTT CCTGCCCGC chr4:185265099-185265179 70 5.54e-05 ttctgggaaa tgtagttt gca chr6:157801084-157801164 28 5.54e-05 TGCAGGGACT TGTAGTTT CTAAGGCCCC chr4:79575004-79575084 60 5.54e-05 gactaggaaa tgtagttt ttgtcttgag chr16:29687574-29687654 65 5.54e-05 agctgggaaa tgtagttt agtagggt chr4:7075467-7075547 63 5.54e-05 tgctgggaaa tgtagttt ttattcccaa chr3:69788441-69788521 34 5.54e-05 TTCTGGGAGC TGTAGTTT TCGTGGGAGC chr4:104020997-104021077 50 5.54e-05 TGCTGGGATT TGTAGTTT CCCTGCTTTC chr19:38270214-38270294 39 5.54e-05 CTCTGGGAAA TGTAGTTT AAGCCTAAAG chr9:72435534-72435614 72 5.54e-05 TTCTGGGAAA TGTAGTTT C chr19:49248613-49248693 73 5.54e-05 TTCTGGGAGT TGTAGTTT chr19:55816998-55817078 71 5.54e-05 TCATGGGATT TGTAGTTT TA chr19:54396427-54396507 2 5.54e-05 C TACAGTTC CCAGAAGACC chr12:124594397-12459447 17 1.05e-04 ctagtgaaac tacatttc ccaggctccc chr5:153211671-153211751 28 1.05e-04 acaactggac tacatttc ccagcagccc chr19:37569234-37569314 47 1.05e-04 AGCGCTGGAC TACATTTC CCAGAGGCAC chr12:119667749-11966782 25 1.05e-04 AACAGGGgac tacatttc ccagcctccc chr2:36845634-36845714 13 1.05e-04 acagctggac tacatttc ccaggcaccc chr5:131526031-131526111 6 1.05e-04 taaac tacatttc ccagattccc chr19:14743226-14743306 29 1.05e-04 aggtagagac tacatttc ccagcctccc chr19:50030969-50031049 4 1.05e-04 AAA TACATTTC CCGTGAGGCG chr3:14361227-14361307 24 1.05e-04 tcagctggac tacatttc ccaggctcct chr16:57728647-57728727 19 1.05e-04 CTGGGAAGAC TACATTTC CCAGAAGCCT chr4:56252366-56252446 7 1.05e-04 agagac tacatttc ccagcttccc chr10:43048344-43048424 66 1.05e-04 AAGTGAAGAC TACATTTC CCAGAAG chr19:41571007-41571087 11 1.05e-04 agttaaaaac tacatttc ccaagctccc chr12:133532880-13353296 10 1.05e-04 GCGCAGAAC TACATTTC CCAGCGTCCC chr19:4304525-4304605 35 1.05e-04 AGCGCGGAAC TACATTTC CCAGGCGGCC chr19:49851181-49851261 10 1.05e-04 gtgtgaaac tacatttc ccaggccgct chr4:6374781-6374861 19 1.05e-04 acatgtggac tacatttc ccagcagcct chr11:69614406-69614486 15 1.05e-04 gagtaaaaac tacatttc ccagacttcc chr3:129409349-129409429 23 1.05e-04 catggaagac tacatttc ccagttccct chr15:75182310-75182390 18 1.05e-04 CTCAGGGAAC TACATTTC CCGTGAAGCT chr1:205744602-205744682 8 1.05e-04 GTGGCAC TACATTTC CCAGCTTTCC chr11:107436435-10743651 31 1.05e-04 AAAACTGCAC TACATTTC CCATGAGCCC chr3:49435015-49435095 32 1.05e-04 ttataaagac tacatttc ccagcattca chr9:133003011-133003091 17 1.05e-04 aacaaaggac tacatttc ccagcctccc chr9:132346478-132346558 19 1.05e-04 ggcccaaaac tacatttc ccagcatccc chr9:37920529-37920609 25 1.05e-04 agccagggac tacatttc ccagcctccc chr9:101172668-101172748 26 1.05e-04 gccctgaaac tacatttc ccagaatcgc chr1:22755253-22755333 27 1.05e-04 gtataaagac tacatttc ccagcatacc chr22:33300162-33300242 17 1.05e-04 ccatctggac tacatttc ccagcaggcc chr6:14800259-14800339 20 1.05e-04 agatgaagac tacatttc ccaggctccc chr19:44331374-44331454 39 1.05e-04 CGCTGTGGAC TACATTTC CCAGAAGTCT chr20:49084689-49084769 18 1.05e-04 cagtaaagac tacatttc ccagcctccc chr9:99616830-99616910 41 1.05e-04 CATTCAGGAC TACATTTC CCATAAGCTC chr19:47942198-47942278 34 1.05e-04 agagctgaac tacatttc ccagcctccc chr19:50651538-50651618 7 1.05e-04 CTGGAC TACATTTC CCAGAAACCA chr19:48922671-48922751 5 1.05e-04 GAAC TACATTTC CCAGCAGCCC chr6:41703397-41703477 68 1.30e-04 CGCCGGGATT TGTAGTCC CGCTC chr19:4066019-4066099 31 1.30e-04 CCCTGGGACT TGTAGTCC AAGCCGCTTG chr11:125773098-12577317 54 1.30e-04 TCATGGGAGG TGTAGTCC AAGTTTGTGG chr16:9147098-9147178 65 1.30e-04 tgctgggaaa tgtagtcc agccacaa chr1:17338465-17338545 41 1.30e-04 TGCCGGGACT TGTAGTCC CCGCCTGCTC chr15:40986899-40986979 47 1.30e-04 TGCCGGGAGA TGTAGTCC CGGGCCGACG chr3:183735751-183735831 13 1.30e-04 TGAAGGGAAC TGTAGTCC TCCTTCCGAG chr17:17653424-17653504 60 1.30e-04 ggctgggaaa tgtagtcc agctgtggct chr2:10552681-10552761 65 1.30e-04 ggctgggaaa tgtagtcc ggctgtgt chr20:986451-986531 67 1.30e-04 gactgggaaa tgtagtcc agccat chr17:40075332-40075412 64 1.30e-04 TGCTGGGACT TGTAGTCC CGCTGGCCC chrX:134478623-134478703 60 1.30e-04 TGCCGGGAGA TGTAGTCC GTAGCGCAGT chr22:29168600-29168680 4 1.30e-04 GCT TGTAGTCC GGAAGGACTG chr20:23402134-23402214 29 1.30e-04 TTTCGGGAGC TGTAGTCC GGGTCCTGTC chr11:134123307-13412338 11 1.30e-04 TTCTGGGAAT TGTAGTCC TGTCCCCTTG chr14:81408130-81408210 13 1.30e-04 GTCTGGGAGT TGTAGTCC ATCTCGGCCT chr1:47799895-47799975 72 1.30e-04 TGCCGGGACT TGTAGTCC G chr17:7094948-7095028 64 1.30e-04 TGCTGGGAAA TGTAGTCC TGTCTAGCC chr22:41840465-41840545 14 1.30e-04 CTCTGGGAAT TGTAGTCC TCAAACACCT chrX:70315607-70315687 21 1.30e-04 GGACGGGAGA TGTAGTCC TCAAGAGTGA chr5:138775204-138775284 20 1.30e-04 CGCTGGTCAT TGTAGTCC AGTCCATATG chr13:31736502-31736582 44 1.30e-04 TGCTGGGATG TGTAGTCC TGGCCGCAGT chr19:49017223-49017303 63 1.30e-04 TTGTAGGAAA TGTAGTCC TGCTCGACCC chr19:55815807-55815887 72 1.30e-04 TCCTGGGAGT TGTAGTCC A chr1:154979439-154979519 62 1.30e-04 CACTGGGAGT TGTAGTCC TTGAGCTCTC chr19:49228264-49228344 63 1.30e-04 TTCTGGGAGT TGTAGTCC ATTCTACAGT chr19:55709057-55709137 72 1.30e-04 TGATGGGATT TGTAGTCC T chr17:21226449-21226529 54 2.32e-04 cgttgggaaa tgtagtct tcatAAGGGA chr1:156308548-156308628 27 2.32e-04 AAGTGGGAGT TGTAGTCT TACCGGGCCG chr4:185585799-185585879 62 2.32e-04 gcctgggaaa tgtagtct ttgttctgga chr11:69444969-69445049 68 2.32e-04 tgctgggaaa tgtagtct ttagc chr21:35434463-35434543 66 2.32e-04 gcttgggaaa tgtagtct gtggttg chr12:117330310-11733039 56 2.32e-04 tgctgggaaa tgtagtct tttggcgaga chr3:4344940-4345020 14 2.32e-04 AGAAACGAAC TACAATTC CCATGAGGCG chr12:57623373-57623453 12 2.32e-04 GTGGGCGAAC TACAATTC CCAAAAGGCC chr12:121488698-12148877 50 2.32e-04 ggctgggaaa tgtagtct ttagcctttg chr14:24701763-24701843 64 2.32e-04 CCCTGGGAGT TGTAGTCT AACCCCCTC chr2:241525743-241525823 56 2.32e-04 TGCTGGGAGC TGTAGTCT GCGACGCAAC chr17:40273371-40273451 56 2.32e-04 TGACGGGAGT TGTAGTCT TCCCGCGCCT chr10:73083348-73083428 47 2.32e-04 ggctgggaaa tgtagtct ttcaatgtag chr10:71754211-71754291 58 2.32e-04 agctgggaaa tgtagtct ttaaccacta chr1:20767420-20767500 63 2.32e-04 ggctgggaaa tgtagtct tgagctggaa chr8:82755015-82755095 14 2.32e-04 AGGAGAAGAC TACAATTC CCAGAAGGAA chr2:136288406-136288486 2 2.32e-04 C TACAATTC CAGCCAAGCA chr13:30881217-30881297 58 2.32e-04 GTCGCTGAAC TACAATTC CCATGATGCA chr10:38383162-38383242 15 2.32e-04 TTGTGGGAAA TGTAGTCT GCACTTTCTA chr16:33569517-33569597 63 2.32e-04 tgctgggaaa tgtagtct ttcttctttg chr6:43215023-43215103 68 2.32e-04 TGCTGGGAGT TGTAGTCT CAGCC chr12:49449920-49450000 44 2.32e-04 TGCTGGGAGT TGTAGTCT CAGGAAGCAT chr14:82000459-82000539 13 2.32e-04 CATCCGAGAC TACAATTC CCAGAATGCG chr10:72288704-72288784 62 2.32e-04 ggctgggaaa tgtagtct tcagctgggt chr2:23598478-23598558 38 2.32e-04 TGCTGGGAGA TGTAGTct cactccaaag chrX:149736803-149736883 26 2.32e-04 TATTGCGAAC TACAATTC CCAGCTGCCT chr19:48907013-48907093 24 2.32e-04 TGCTGGGAGA TGTAGTCT CCTCACTGCC chr8:124054111-124054191 65 2.32e-04 TCCTGGGGCC TGTAGTCT CCACGCCC chr20:48732488-48732568 30 2.32e-04 TGCTGGTTGT TGTAGTCT AGCGTTGGCG chr17:40559677-40559757 59 2.32e-04 TGCTGGGACT TGTAGTCT CTACCTGCCA chr19:54411492-54411572 71 2.32e-04 TGATGGGAAA TGTAGTCT CC chr2:38892992-38893072 10 2.85e-04 GCCCCAAAA TGCAATTT CACCTCCCAA chr2:27319261-27319341 56 2.85e-04 TTCTGGGAGA TGCAGTCT CCAAGGCACA chr3:50388504-50388584 7 3.17e-04 GGGAAC TACAATTT CCATAGTGCT chr16:30908468-30908548 8 3.17e-04 TCAGGAC TACATTCC CCAGCACGCA chr11:60681316-60681396 29 3.46e-04 AGGGAACATT TGTAGCTC TAGAACTACA chr7:1465352-1465432 66 3.46e-04 gccatgtgac tatattct ggccaat chr16:81779949-81780029 55 3.73e-04 gtgaacgcac tgcattct gggaaatgta chr13:26827955-26828035 61 3.73e-04 CGGCGGCCTG TGCATTCT GGGTATTGTA chr5:74807639-74807719 26 3.73e-04 GCAGCTGTGC TGCATTCT GGGAAGGGCG chr7:150689942-150690022 69 3.73e-04 GTACCCCACC TGCATTCT GGGA chr19:55708325-55708405 40 4.13e-04 CCTCCATCAC TGCAGCTC ATGAAGTCAT chr2:2617283-2617363 40 4.64e-04 AAGCGTaaac tacaatcc ccaggatgca chr10:92631647-92631727 19 4.64e-04 GCAGGTTAAC TACAGCTC CCAGCATGCC chr6:10147347-10147427 53 5.21e-04 caggatgcaa tgcatctc agccggtctt chr3:13933313-13933393 17 5.55e-04 CTTtagaaac tacatctc ccagcatcct chr7:152887686-152887766 18 5.55e-04 gcagtcggac tacatctc ccagaatccc chr17:19912564-19912644 21 5.55e-04 GTCCGGGTAC TACATCTC CCAGCGAGCC chr16:74729859-74729939 14 5.55e-04 cagccggaac tacatctc ccagccttcc chr12:56710133-56710213 7 5.55e-04 GGAAAC TACATCTC CCAGGAAGCA chr17:7358821-7358901 73 6.20e-04 TCATGGGAGT TGTAGTAC chr2:220150937-220151017 73 6.47e-04 TACGGAGCTG TGCATCTT chr2:217277077-217277157 34 7.01e-04 CAGAAGACAC TGCAGCCC CGCTCGCGTT chr14:36295376-36295456 26 7.01e-04 GATGGAAGCG TGCAGCCC CTGCAGGTCT chr15:52121768-52121848 30 7.78e-04 TTGCTAGAAC TACAACTC CCAGGATGCC chr10:44144321-44144401 6 7.78e-04 TGGAC TACAACTC CCAGGAGTCT chr11:113644472-11364455 61 7.78e-04 AGGGGCGCAC TACAACTC CCAGCAGGCA chr19:19887287-19887367 32 7.78e-04 GTAAAGAGAC TACAACTC CCAGCATACC chr1:243419228-243419308 50 7.78e-04 ACGTGAGGAC TACAACTC CCGACGTGCA chr19:48866434-48866514 2 7.78e-04 C TACAACTC CCAGGAGGCG chr19:48848302-48848382 27 7.78e-04 GGCTCAGGAC TACAACTC CCAGCAGCCC chr11:73661981-73662061 23 7.78e-04 GAAGTGGGAC TACAACTC CCAGAGTGCA chr11:64456049-64456129 38 7.78e-04 GACTGGGAAC TACAACTC CCAGCAGCGC chrX:106045769-106045849 66 7.78e-04 CGTAGGAAAC TACAACTC CCAAGAG chr12:861514-861594 11 7.78e-04 CAAAGAAAAC TACAACTC CCACGAGGCA chr17:7591572-7591652 28 7.78e-04 GCGTTCAGAC TACAACTC CCAGCAGCCA chr19:49250488-49250568 4 7.78e-04 GAC TACAACTC CCAAAATGCC chr12:32832079-32832159 14 7.78e-04 GCTCCAGAAC TACAACTC CCAGCAGGCC chr1:224544447-224544527 48 7.78e-04 AAATATGGAC TACAACTC CCGGCATGCC chr19:49422141-49422221 6 7.78e-04 AAAAC TACAACTC CCATCAGCCC chr1:147142662-147142742 58 7.78e-04 CTGCGGAAAC TACAACTC CCACAAGGCT chr19:49013930-49014010 7 7.78e-04 TTGGAC TACAACTC CCGTGATGCT chr19:54480865-54480945 1 7.78e-04 . TACAACTC CCATGATCCA chr19:55690517-55690597 66 8.41e-04 TGCTGGGAGT TGTAGTAT CAGCCTC chr3:167452749-167452829 44 8.92e-04 ATCGGAAGAC TACACTTC CCGGCAGGCC chr6:110501301-110501381 9 8.92e-04 TTGCAAAC TACACTTC CCATTGTGCC chr2:54950536-54950616 64 8.92e-04 CAGAGAGGAC TACACTTC CCAGGATGC chr5:178286889-178286969 11 8.92e-04 CGCGTGGAAC TACACTTC CCAGAAAGCC chr6:44101522-44101602 58 8.92e-04 CTCTGGGAGT TGTAGTGC TCATAACACT chr19:507895-507975 65 8.92e-04 TGCTGGGAGT TGTAGTGC GCGATGCC chr5:55008169-55008249 18 9.69e-04 CGGCGGGAGT TGGAGTTC TGAATGCGCC chr19:7616377-7616457 43 9.69e-04 TGCTGGGAAA TGGAGTTC CGCGAAGAAA chr16:87009103-87009183 22 1.04e-03 cagaaaaaac tacatccc ccagcatcct chr19:57946556-57946636 42 1.13e-03 ACGTGAGAAC TACATTAC CCAGAAGACA chr11:46134679-46134759 24 1.13e-03 GGTCCCAGCA TGCAGTGC TCTAATCTGA chr19:56915619-56915699 50 1.42e-03 GGCCCCGGAC TCCATTTC CCAGCGGCCC chr10:103892659-10389273 72 1.42e-03 TTCGTAGTCT TGCAGTGT C chr4:18023794-18023874 14 1.42e-03 CTTCCCAGGC TCCATTTC GCCAGGATCC chr4:6585013-6585093 7 1.49e-03 atagag tctatttt gctcccagtc chr19:49362005-49362085 7 1.49e-03 ATGGAC TACAATAC CCATGACACC chr19:44488242-44488322 3 1.62e-03 AG TGGAGTCC ATTTGCTCTG chr1:10706565-10706645 42 1.67e-03 GCACAGGGAT TGCAATAT GCAGGGTGCC chr4:174291896-174291976 11 1.82e-03 TGCTAGGATT AGTAGTTC CTCCGTCCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:155990742-155990822 1e-05 57_[+1]_15 chr11:66138868-66138948 1e-05 69_[+1]_3 chr19:49947073-49947153 1e-05 64_[+1]_8 chr1:35177274-35177354 1e-05 58_[+1]_14 chr19:49148190-49148270 1e-05 69_[+1]_3 chr17:4634603-4634683 1e-05 16_[+1]_56 chr19:49224361-49224441 1e-05 67_[+1]_5 chr9:97021496-97021576 1e-05 62_[+1]_10 chr20:21077065-21077145 1e-05 62_[+1]_10 chr16:31045654-31045734 1e-05 46_[+1]_26 chr11:74109856-74109936 1e-05 12_[+1]_60 chr6:15245626-15245706 1e-05 57_[+1]_15 chr11:64387367-64387447 1e-05 48_[+1]_24 chr16:46918121-46918201 1e-05 29_[+1]_43 chr1:234812098-234812178 1e-05 55_[+1]_17 chr6:6890960-6891040 1e-05 57_[+1]_15 chr5:178157719-178157799 1e-05 60_[+1]_12 chr19:49385146-49385226 1e-05 70_[+1]_2 chr19:49486859-49486939 1e-05 68_[+1]_4 chr6:31866310-31866390 1e-05 34_[+1]_38 chr19:54682369-54682449 1e-05 69_[+1]_3 chr16:68482612-68482692 1.7e-05 8_[+1]_64 chr12:88535972-88536052 3.1e-05 28_[+1]_44 chr19:51152940-51153020 3.1e-05 21_[+1]_51 chr1:15288464-15288544 5.5e-05 57_[+1]_15 chr2:18741923-18742003 5.5e-05 58_[+1]_14 chr1:154842888-154842968 5.5e-05 58_[+1]_14 chr19:48832876-48832956 5.5e-05 55_[+1]_17 chr19:1095514-1095594 5.5e-05 63_[+1]_9 chr19:10828064-10828144 5.5e-05 47_[+1]_25 chr16:58426726-58426806 5.5e-05 65_[+1]_7 chr21:35402526-35402606 5.5e-05 48_[+1]_24 chr2:26296438-26296518 5.5e-05 27_[+1]_45 chr1:156052280-156052360 5.5e-05 55_[+1]_17 chr19:44809191-44809271 5.5e-05 63_[+1]_9 chr17:72186455-72186535 5.5e-05 62_[+1]_10 chr3:141365812-141365892 5.5e-05 33_[+1]_39 chr9:15422715-15422795 5.5e-05 32_[+1]_40 chr2:74753493-74753573 5.5e-05 48_[+1]_24 chr2:202316292-202316372 5.5e-05 63_[+1]_9 chr4:185265099-185265179 5.5e-05 69_[+1]_3 chr6:157801084-157801164 5.5e-05 27_[+1]_45 chr4:79575004-79575084 5.5e-05 59_[+1]_13 chr16:29687574-29687654 5.5e-05 64_[+1]_8 chr4:7075467-7075547 5.5e-05 62_[+1]_10 chr3:69788441-69788521 5.5e-05 33_[+1]_39 chr4:104020997-104021077 5.5e-05 49_[+1]_23 chr19:38270214-38270294 5.5e-05 38_[+1]_34 chr9:72435534-72435614 5.5e-05 71_[+1]_1 chr19:49248613-49248693 5.5e-05 72_[+1] chr19:55816998-55817078 5.5e-05 70_[+1]_2 chr19:54396427-54396507 5.5e-05 1_[+1]_71 chr12:124594397-12459447 0.00011 16_[+1]_56 chr5:153211671-153211751 0.00011 27_[+1]_45 chr19:37569234-37569314 0.00011 46_[+1]_26 chr12:119667749-11966782 0.00011 24_[+1]_48 chr2:36845634-36845714 0.00011 12_[+1]_60 chr5:131526031-131526111 0.00011 5_[+1]_67 chr19:14743226-14743306 0.00011 28_[+1]_44 chr19:50030969-50031049 0.00011 3_[+1]_69 chr3:14361227-14361307 0.00011 23_[+1]_49 chr16:57728647-57728727 0.00011 18_[+1]_54 chr4:56252366-56252446 0.00011 6_[+1]_66 chr10:43048344-43048424 0.00011 65_[+1]_7 chr19:41571007-41571087 0.00011 10_[+1]_62 chr12:133532880-13353296 0.00011 9_[+1]_63 chr19:4304525-4304605 0.00011 34_[+1]_38 chr19:49851181-49851261 0.00011 9_[+1]_63 chr4:6374781-6374861 0.00011 18_[+1]_54 chr11:69614406-69614486 0.00011 14_[+1]_58 chr3:129409349-129409429 0.00011 22_[+1]_50 chr15:75182310-75182390 0.00011 17_[+1]_55 chr1:205744602-205744682 0.00011 7_[+1]_65 chr11:107436435-10743651 0.00011 30_[+1]_42 chr3:49435015-49435095 0.00011 31_[+1]_41 chr9:133003011-133003091 0.00011 16_[+1]_56 chr9:132346478-132346558 0.00011 18_[+1]_54 chr9:37920529-37920609 0.00011 24_[+1]_48 chr9:101172668-101172748 0.00011 25_[+1]_47 chr1:22755253-22755333 0.00011 26_[+1]_46 chr22:33300162-33300242 0.00011 16_[+1]_56 chr6:14800259-14800339 0.00011 19_[+1]_53 chr19:44331374-44331454 0.00011 38_[+1]_34 chr20:49084689-49084769 0.00011 17_[+1]_55 chr9:99616830-99616910 0.00011 40_[+1]_32 chr19:47942198-47942278 0.00011 33_[+1]_39 chr19:50651538-50651618 0.00011 6_[+1]_66 chr19:48922671-48922751 0.00011 4_[+1]_68 chr6:41703397-41703477 0.00013 67_[+1]_5 chr19:4066019-4066099 0.00013 30_[+1]_42 chr11:125773098-12577317 0.00013 53_[+1]_19 chr16:9147098-9147178 0.00013 64_[+1]_8 chr1:17338465-17338545 0.00013 40_[+1]_32 chr15:40986899-40986979 0.00013 46_[+1]_26 chr3:183735751-183735831 0.00013 12_[+1]_60 chr17:17653424-17653504 0.00013 59_[+1]_13 chr2:10552681-10552761 0.00013 64_[+1]_8 chr20:986451-986531 0.00013 66_[+1]_6 chr17:40075332-40075412 0.00013 63_[+1]_9 chrX:134478623-134478703 0.00013 59_[+1]_13 chr22:29168600-29168680 0.00013 3_[+1]_69 chr20:23402134-23402214 0.00013 28_[+1]_44 chr11:134123307-13412338 0.00013 10_[+1]_62 chr14:81408130-81408210 0.00013 12_[+1]_60 chr1:47799895-47799975 0.00013 71_[+1]_1 chr17:7094948-7095028 0.00013 63_[+1]_9 chr22:41840465-41840545 0.00013 13_[+1]_59 chrX:70315607-70315687 0.00013 20_[+1]_52 chr5:138775204-138775284 0.00013 19_[+1]_53 chr13:31736502-31736582 0.00013 43_[+1]_29 chr19:49017223-49017303 0.00013 62_[+1]_10 chr19:55815807-55815887 0.00013 71_[+1]_1 chr1:154979439-154979519 0.00013 61_[+1]_11 chr19:49228264-49228344 0.00013 62_[+1]_10 chr19:55709057-55709137 0.00013 71_[+1]_1 chr17:21226449-21226529 0.00023 53_[+1]_19 chr1:156308548-156308628 0.00023 26_[+1]_46 chr4:185585799-185585879 0.00023 61_[+1]_11 chr11:69444969-69445049 0.00023 67_[+1]_5 chr21:35434463-35434543 0.00023 65_[+1]_7 chr12:117330310-11733039 0.00023 55_[+1]_17 chr3:4344940-4345020 0.00023 13_[+1]_59 chr12:57623373-57623453 0.00023 11_[+1]_61 chr12:121488698-12148877 0.00023 49_[+1]_23 chr14:24701763-24701843 0.00023 63_[+1]_9 chr2:241525743-241525823 0.00023 55_[+1]_17 chr17:40273371-40273451 0.00023 55_[+1]_17 chr10:73083348-73083428 0.00023 46_[+1]_26 chr10:71754211-71754291 0.00023 57_[+1]_15 chr1:20767420-20767500 0.00023 62_[+1]_10 chr8:82755015-82755095 0.00023 13_[+1]_59 chr2:136288406-136288486 0.00023 1_[+1]_71 chr13:30881217-30881297 0.00023 57_[+1]_15 chr10:38383162-38383242 0.00023 14_[+1]_58 chr16:33569517-33569597 0.00023 62_[+1]_10 chr6:43215023-43215103 0.00023 67_[+1]_5 chr12:49449920-49450000 0.00023 43_[+1]_29 chr14:82000459-82000539 0.00023 12_[+1]_60 chr10:72288704-72288784 0.00023 61_[+1]_11 chr2:23598478-23598558 0.00023 37_[+1]_35 chrX:149736803-149736883 0.00023 25_[+1]_47 chr19:48907013-48907093 0.00023 23_[+1]_49 chr8:124054111-124054191 0.00023 64_[+1]_8 chr20:48732488-48732568 0.00023 29_[+1]_43 chr17:40559677-40559757 0.00023 58_[+1]_14 chr19:54411492-54411572 0.00023 70_[+1]_2 chr2:38892992-38893072 0.00029 9_[+1]_63 chr2:27319261-27319341 0.00029 55_[+1]_17 chr3:50388504-50388584 0.00032 6_[+1]_66 chr16:30908468-30908548 0.00032 7_[+1]_65 chr11:60681316-60681396 0.00035 28_[+1]_44 chr7:1465352-1465432 0.00035 65_[+1]_7 chr16:81779949-81780029 0.00037 54_[+1]_18 chr13:26827955-26828035 0.00037 60_[+1]_12 chr5:74807639-74807719 0.00037 25_[+1]_47 chr7:150689942-150690022 0.00037 68_[+1]_4 chr19:55708325-55708405 0.00041 39_[+1]_33 chr2:2617283-2617363 0.00046 39_[+1]_33 chr10:92631647-92631727 0.00046 18_[+1]_54 chr6:10147347-10147427 0.00052 52_[+1]_20 chr3:13933313-13933393 0.00055 16_[+1]_56 chr7:152887686-152887766 0.00055 17_[+1]_55 chr17:19912564-19912644 0.00055 20_[+1]_52 chr16:74729859-74729939 0.00055 13_[+1]_59 chr12:56710133-56710213 0.00055 6_[+1]_66 chr17:7358821-7358901 0.00062 72_[+1] chr2:220150937-220151017 0.00065 72_[+1] chr2:217277077-217277157 0.0007 33_[+1]_39 chr14:36295376-36295456 0.0007 25_[+1]_47 chr15:52121768-52121848 0.00078 29_[+1]_43 chr10:44144321-44144401 0.00078 5_[+1]_67 chr11:113644472-11364455 0.00078 60_[+1]_12 chr19:19887287-19887367 0.00078 31_[+1]_41 chr1:243419228-243419308 0.00078 49_[+1]_23 chr19:48866434-48866514 0.00078 1_[+1]_71 chr19:48848302-48848382 0.00078 26_[+1]_46 chr11:73661981-73662061 0.00078 22_[+1]_50 chr11:64456049-64456129 0.00078 37_[+1]_35 chrX:106045769-106045849 0.00078 65_[+1]_7 chr12:861514-861594 0.00078 10_[+1]_62 chr17:7591572-7591652 0.00078 27_[+1]_45 chr19:49250488-49250568 0.00078 3_[+1]_69 chr12:32832079-32832159 0.00078 13_[+1]_59 chr1:224544447-224544527 0.00078 47_[+1]_25 chr19:49422141-49422221 0.00078 5_[+1]_67 chr1:147142662-147142742 0.00078 57_[+1]_15 chr19:49013930-49014010 0.00078 6_[+1]_66 chr19:54480865-54480945 0.00078 [+1]_72 chr19:55690517-55690597 0.00084 65_[+1]_7 chr3:167452749-167452829 0.00089 43_[+1]_29 chr6:110501301-110501381 0.00089 8_[+1]_64 chr2:54950536-54950616 0.00089 63_[+1]_9 chr5:178286889-178286969 0.00089 10_[+1]_62 chr6:44101522-44101602 0.00089 57_[+1]_15 chr19:507895-507975 0.00089 64_[+1]_8 chr5:55008169-55008249 0.00097 17_[+1]_55 chr19:7616377-7616457 0.00097 42_[+1]_30 chr16:87009103-87009183 0.001 21_[+1]_51 chr19:57946556-57946636 0.0011 41_[+1]_31 chr11:46134679-46134759 0.0011 23_[+1]_49 chr19:56915619-56915699 0.0014 49_[+1]_23 chr10:103892659-10389273 0.0014 71_[+1]_1 chr4:18023794-18023874 0.0014 13_[+1]_59 chr4:6585013-6585093 0.0015 6_[+1]_66 chr19:49362005-49362085 0.0015 6_[+1]_66 chr19:44488242-44488322 0.0016 2_[+1]_70 chr1:10706565-10706645 0.0017 41_[+1]_31 chr4:174291896-174291976 0.0018 10_[+1]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TRYAGTTC width=8 seqs=208 chr1:155990742-155990822 ( 58) TGTAGTTC 1 chr11:66138868-66138948 ( 70) TGTAGTTC 1 chr19:49947073-49947153 ( 65) TGTAGTTC 1 chr1:35177274-35177354 ( 59) TGTAGTTC 1 chr19:49148190-49148270 ( 70) TGTAGTTC 1 chr17:4634603-4634683 ( 17) TGTAGTTC 1 chr19:49224361-49224441 ( 68) TGTAGTTC 1 chr9:97021496-97021576 ( 63) TGTAGTTC 1 chr20:21077065-21077145 ( 63) TGTAGTTC 1 chr16:31045654-31045734 ( 47) TGTAGTTC 1 chr11:74109856-74109936 ( 13) TGTAGTTC 1 chr6:15245626-15245706 ( 58) TGTAGTTC 1 chr11:64387367-64387447 ( 49) TGTAGTTC 1 chr16:46918121-46918201 ( 30) TGTAGTTC 1 chr1:234812098-234812178 ( 56) TGTAGTTC 1 chr6:6890960-6891040 ( 58) TGTAGTTC 1 chr5:178157719-178157799 ( 61) TGTAGTTC 1 chr19:49385146-49385226 ( 71) TGTAGTTC 1 chr19:49486859-49486939 ( 69) TGTAGTTC 1 chr6:31866310-31866390 ( 35) TGTAGTTC 1 chr19:54682369-54682449 ( 70) TGTAGTTC 1 chr16:68482612-68482692 ( 9) TATAGTTC 1 chr12:88535972-88536052 ( 29) TGCAGTTC 1 chr19:51152940-51153020 ( 22) TGCAGTTC 1 chr1:15288464-15288544 ( 58) TGTAGTTT 1 chr2:18741923-18742003 ( 59) TGTAGTTT 1 chr1:154842888-154842968 ( 59) TGTAGTTT 1 chr19:48832876-48832956 ( 56) TGTAGTTT 1 chr19:1095514-1095594 ( 64) TGTAGTTT 1 chr19:10828064-10828144 ( 48) TGTAGTTT 1 chr16:58426726-58426806 ( 66) TGTAGTTT 1 chr21:35402526-35402606 ( 49) TGTAGTTT 1 chr2:26296438-26296518 ( 28) TGTAGTTT 1 chr1:156052280-156052360 ( 56) TGTAGTTT 1 chr19:44809191-44809271 ( 64) TACAGTTC 1 chr17:72186455-72186535 ( 63) TGTAGTTT 1 chr3:141365812-141365892 ( 34) TGTAGTTT 1 chr9:15422715-15422795 ( 33) TGTAGTTT 1 chr2:74753493-74753573 ( 49) TGTAGTTT 1 chr2:202316292-202316372 ( 64) TGTAGTTT 1 chr4:185265099-185265179 ( 70) TGTAGTTT 1 chr6:157801084-157801164 ( 28) TGTAGTTT 1 chr4:79575004-79575084 ( 60) TGTAGTTT 1 chr16:29687574-29687654 ( 65) TGTAGTTT 1 chr4:7075467-7075547 ( 63) TGTAGTTT 1 chr3:69788441-69788521 ( 34) TGTAGTTT 1 chr4:104020997-104021077 ( 50) TGTAGTTT 1 chr19:38270214-38270294 ( 39) TGTAGTTT 1 chr9:72435534-72435614 ( 72) TGTAGTTT 1 chr19:49248613-49248693 ( 73) TGTAGTTT 1 chr19:55816998-55817078 ( 71) TGTAGTTT 1 chr19:54396427-54396507 ( 2) TACAGTTC 1 chr12:124594397-12459447 ( 17) TACATTTC 1 chr5:153211671-153211751 ( 28) TACATTTC 1 chr19:37569234-37569314 ( 47) TACATTTC 1 chr12:119667749-11966782 ( 25) TACATTTC 1 chr2:36845634-36845714 ( 13) TACATTTC 1 chr5:131526031-131526111 ( 6) TACATTTC 1 chr19:14743226-14743306 ( 29) TACATTTC 1 chr19:50030969-50031049 ( 4) TACATTTC 1 chr3:14361227-14361307 ( 24) TACATTTC 1 chr16:57728647-57728727 ( 19) TACATTTC 1 chr4:56252366-56252446 ( 7) TACATTTC 1 chr10:43048344-43048424 ( 66) TACATTTC 1 chr19:41571007-41571087 ( 11) TACATTTC 1 chr12:133532880-13353296 ( 10) TACATTTC 1 chr19:4304525-4304605 ( 35) TACATTTC 1 chr19:49851181-49851261 ( 10) TACATTTC 1 chr4:6374781-6374861 ( 19) TACATTTC 1 chr11:69614406-69614486 ( 15) TACATTTC 1 chr3:129409349-129409429 ( 23) TACATTTC 1 chr15:75182310-75182390 ( 18) TACATTTC 1 chr1:205744602-205744682 ( 8) TACATTTC 1 chr11:107436435-10743651 ( 31) TACATTTC 1 chr3:49435015-49435095 ( 32) TACATTTC 1 chr9:133003011-133003091 ( 17) TACATTTC 1 chr9:132346478-132346558 ( 19) TACATTTC 1 chr9:37920529-37920609 ( 25) TACATTTC 1 chr9:101172668-101172748 ( 26) TACATTTC 1 chr1:22755253-22755333 ( 27) TACATTTC 1 chr22:33300162-33300242 ( 17) TACATTTC 1 chr6:14800259-14800339 ( 20) TACATTTC 1 chr19:44331374-44331454 ( 39) TACATTTC 1 chr20:49084689-49084769 ( 18) TACATTTC 1 chr9:99616830-99616910 ( 41) TACATTTC 1 chr19:47942198-47942278 ( 34) TACATTTC 1 chr19:50651538-50651618 ( 7) TACATTTC 1 chr19:48922671-48922751 ( 5) TACATTTC 1 chr6:41703397-41703477 ( 68) TGTAGTCC 1 chr19:4066019-4066099 ( 31) TGTAGTCC 1 chr11:125773098-12577317 ( 54) TGTAGTCC 1 chr16:9147098-9147178 ( 65) TGTAGTCC 1 chr1:17338465-17338545 ( 41) TGTAGTCC 1 chr15:40986899-40986979 ( 47) TGTAGTCC 1 chr3:183735751-183735831 ( 13) TGTAGTCC 1 chr17:17653424-17653504 ( 60) TGTAGTCC 1 chr2:10552681-10552761 ( 65) TGTAGTCC 1 chr20:986451-986531 ( 67) TGTAGTCC 1 chr17:40075332-40075412 ( 64) TGTAGTCC 1 chrX:134478623-134478703 ( 60) TGTAGTCC 1 chr22:29168600-29168680 ( 4) TGTAGTCC 1 chr20:23402134-23402214 ( 29) TGTAGTCC 1 chr11:134123307-13412338 ( 11) TGTAGTCC 1 chr14:81408130-81408210 ( 13) TGTAGTCC 1 chr1:47799895-47799975 ( 72) TGTAGTCC 1 chr17:7094948-7095028 ( 64) TGTAGTCC 1 chr22:41840465-41840545 ( 14) TGTAGTCC 1 chrX:70315607-70315687 ( 21) TGTAGTCC 1 chr5:138775204-138775284 ( 20) TGTAGTCC 1 chr13:31736502-31736582 ( 44) TGTAGTCC 1 chr19:49017223-49017303 ( 63) TGTAGTCC 1 chr19:55815807-55815887 ( 72) TGTAGTCC 1 chr1:154979439-154979519 ( 62) TGTAGTCC 1 chr19:49228264-49228344 ( 63) TGTAGTCC 1 chr19:55709057-55709137 ( 72) TGTAGTCC 1 chr17:21226449-21226529 ( 54) TGTAGTCT 1 chr1:156308548-156308628 ( 27) TGTAGTCT 1 chr4:185585799-185585879 ( 62) TGTAGTCT 1 chr11:69444969-69445049 ( 68) TGTAGTCT 1 chr21:35434463-35434543 ( 66) TGTAGTCT 1 chr12:117330310-11733039 ( 56) TGTAGTCT 1 chr3:4344940-4345020 ( 14) TACAATTC 1 chr12:57623373-57623453 ( 12) TACAATTC 1 chr12:121488698-12148877 ( 50) TGTAGTCT 1 chr14:24701763-24701843 ( 64) TGTAGTCT 1 chr2:241525743-241525823 ( 56) TGTAGTCT 1 chr17:40273371-40273451 ( 56) TGTAGTCT 1 chr10:73083348-73083428 ( 47) TGTAGTCT 1 chr10:71754211-71754291 ( 58) TGTAGTCT 1 chr1:20767420-20767500 ( 63) TGTAGTCT 1 chr8:82755015-82755095 ( 14) TACAATTC 1 chr2:136288406-136288486 ( 2) TACAATTC 1 chr13:30881217-30881297 ( 58) TACAATTC 1 chr10:38383162-38383242 ( 15) TGTAGTCT 1 chr16:33569517-33569597 ( 63) TGTAGTCT 1 chr6:43215023-43215103 ( 68) TGTAGTCT 1 chr12:49449920-49450000 ( 44) TGTAGTCT 1 chr14:82000459-82000539 ( 13) TACAATTC 1 chr10:72288704-72288784 ( 62) TGTAGTCT 1 chr2:23598478-23598558 ( 38) TGTAGTCT 1 chrX:149736803-149736883 ( 26) TACAATTC 1 chr19:48907013-48907093 ( 24) TGTAGTCT 1 chr8:124054111-124054191 ( 65) TGTAGTCT 1 chr20:48732488-48732568 ( 30) TGTAGTCT 1 chr17:40559677-40559757 ( 59) TGTAGTCT 1 chr19:54411492-54411572 ( 71) TGTAGTCT 1 chr2:38892992-38893072 ( 10) TGCAATTT 1 chr2:27319261-27319341 ( 56) TGCAGTCT 1 chr3:50388504-50388584 ( 7) TACAATTT 1 chr16:30908468-30908548 ( 8) TACATTCC 1 chr11:60681316-60681396 ( 29) TGTAGCTC 1 chr7:1465352-1465432 ( 66) TATATTCT 1 chr16:81779949-81780029 ( 55) TGCATTCT 1 chr13:26827955-26828035 ( 61) TGCATTCT 1 chr5:74807639-74807719 ( 26) TGCATTCT 1 chr7:150689942-150690022 ( 69) TGCATTCT 1 chr19:55708325-55708405 ( 40) TGCAGCTC 1 chr2:2617283-2617363 ( 40) TACAATCC 1 chr10:92631647-92631727 ( 19) TACAGCTC 1 chr6:10147347-10147427 ( 53) TGCATCTC 1 chr3:13933313-13933393 ( 17) TACATCTC 1 chr7:152887686-152887766 ( 18) TACATCTC 1 chr17:19912564-19912644 ( 21) TACATCTC 1 chr16:74729859-74729939 ( 14) TACATCTC 1 chr12:56710133-56710213 ( 7) TACATCTC 1 chr17:7358821-7358901 ( 73) TGTAGTAC 1 chr2:220150937-220151017 ( 73) TGCATCTT 1 chr2:217277077-217277157 ( 34) TGCAGCCC 1 chr14:36295376-36295456 ( 26) TGCAGCCC 1 chr15:52121768-52121848 ( 30) TACAACTC 1 chr10:44144321-44144401 ( 6) TACAACTC 1 chr11:113644472-11364455 ( 61) TACAACTC 1 chr19:19887287-19887367 ( 32) TACAACTC 1 chr1:243419228-243419308 ( 50) TACAACTC 1 chr19:48866434-48866514 ( 2) TACAACTC 1 chr19:48848302-48848382 ( 27) TACAACTC 1 chr11:73661981-73662061 ( 23) TACAACTC 1 chr11:64456049-64456129 ( 38) TACAACTC 1 chrX:106045769-106045849 ( 66) TACAACTC 1 chr12:861514-861594 ( 11) TACAACTC 1 chr17:7591572-7591652 ( 28) TACAACTC 1 chr19:49250488-49250568 ( 4) TACAACTC 1 chr12:32832079-32832159 ( 14) TACAACTC 1 chr1:224544447-224544527 ( 48) TACAACTC 1 chr19:49422141-49422221 ( 6) TACAACTC 1 chr1:147142662-147142742 ( 58) TACAACTC 1 chr19:49013930-49014010 ( 7) TACAACTC 1 chr19:54480865-54480945 ( 1) TACAACTC 1 chr19:55690517-55690597 ( 66) TGTAGTAT 1 chr3:167452749-167452829 ( 44) TACACTTC 1 chr6:110501301-110501381 ( 9) TACACTTC 1 chr2:54950536-54950616 ( 64) TACACTTC 1 chr5:178286889-178286969 ( 11) TACACTTC 1 chr6:44101522-44101602 ( 58) TGTAGTGC 1 chr19:507895-507975 ( 65) TGTAGTGC 1 chr5:55008169-55008249 ( 18) TGGAGTTC 1 chr19:7616377-7616457 ( 43) TGGAGTTC 1 chr16:87009103-87009183 ( 22) TACATCCC 1 chr19:57946556-57946636 ( 42) TACATTAC 1 chr11:46134679-46134759 ( 24) TGCAGTGC 1 chr19:56915619-56915699 ( 50) TCCATTTC 1 chr10:103892659-10389273 ( 72) TGCAGTGT 1 chr4:18023794-18023874 ( 14) TCCATTTC 1 chr4:6585013-6585093 ( 7) TCTATTTT 1 chr19:49362005-49362085 ( 7) TACAATAC 1 chr19:44488242-44488322 ( 3) TGGAGTCC 1 chr1:10706565-10706645 ( 42) TGCAATAT 1 chr4:174291896-174291976 ( 11) AGTAGTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.97426 E= 2.0e-185 -544 -1434 -1434 224 91 -432 102 -1434 -1434 71 -434 129 225 -1434 -1434 -1434 -49 -391 97 31 -1434 -91 -1434 201 -312 7 -392 164 -1434 127 -1434 53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 208 E= 2.0e-185 0.004808 0.000000 0.000000 0.995192 0.394231 0.014423 0.591346 0.000000 0.000000 0.471154 0.014423 0.514423 1.000000 0.000000 0.000000 0.000000 0.149038 0.019231 0.572115 0.259615 0.000000 0.153846 0.000000 0.846154 0.024038 0.302885 0.019231 0.653846 0.000000 0.697115 0.000000 0.302885 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRYAGTTC MEME-1 regular expression -------------------------------------------------------------------------------- T[GA][TC]A[GT]T[TC][CT] -------------------------------------------------------------------------------- Time 4.69 secs. ******************************************************************************** ******************************************************************************** MOTIF TGCTGGGA MEME-2 width = 8 sites = 161 llr = 1173 E-value = 4.1e-117 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :12::::a pos.-specific C 2271:::: probability G 15::aaa: matrix T 72:9:::: bits 2.3 2.0 * 1.8 ** 1.6 ***** Relative 1.4 ***** Entropy 1.1 ***** (10.5 bits) 0.9 * ****** 0.7 * ****** 0.5 * ****** 0.2 ******** 0.0 -------- Multilevel TGCTGGGA consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:35177274-35177354 49 1.92e-05 cagcaaggca tgctggga aatgtagttc chr11:69444969-69445049 58 1.92e-05 ctgcaaggga tgctggga aatgtagtct chr12:117330310-11733039 46 1.92e-05 ctgcatagac tgctggga aatgtagtct chr2:18741923-18742003 49 1.92e-05 GCGTGGGGCA TGCTGGGA CTTGTAGTTT chr16:9147098-9147178 55 1.92e-05 cagcaaggga tgctggga aatgtagtcc chr19:48832876-48832956 46 1.92e-05 CCCCAGGGAT TGCTGGGA CTTGTAGTTT chr2:241525743-241525823 46 1.92e-05 CGGCGGCGCA TGCTGGGA GCTGTAGTCT chr12:88535972-88536052 54 1.92e-05 GGCTTCTGCA TGCTGGGA ACTGAAGTCC chr19:48866434-48866514 66 1.92e-05 CCGCGAAGCC TGCTGGGA GCCGTAG chr17:72186455-72186535 53 1.92e-05 ctgcaaagag tgctggga tatgtagttt chr17:40075332-40075412 54 1.92e-05 CCCCGGGGCC TGCTGGGA CTTGTAGTCC chr2:74753493-74753573 39 1.92e-05 GTGAAAGGCA TGCTGGGA CTTGTAGTTT chr2:202316292-202316372 54 1.92e-05 GCGCAAGACC TGCTGGGA ATTGTAGTTT chr19:7616377-7616457 2 1.92e-05 A TGCTGGGA GGGAAGCCTT chr16:33569517-33569597 53 1.92e-05 ctgcaaggaa tgctggga aatgtagtct chr6:43215023-43215103 58 1.92e-05 CTGCTCGGCC TGCTGGGA GTTGTAGTCT chr12:49449920-49450000 34 1.92e-05 AGGCTAAGCA TGCTGGGA GTTGTAGTCT chr4:7075467-7075547 53 1.92e-05 ctgcaaagga tgctggga aatgtagttt chr17:7094948-7095028 54 1.92e-05 CCCCAGGGGC TGCTGGGA AATGTAGTCC chr2:23598478-23598558 28 1.92e-05 actgccagga TGCTGGGA GATGTAGTct chr19:49422141-49422221 69 1.92e-05 CCCAAAGGAC TGCTGGGA GTTG chr13:31736502-31736582 65 1.92e-05 CCGCAGTGCT TGCTGGGA CCCGGCTT chr19:48907013-48907093 14 1.92e-05 CCTCATTGCA TGCTGGGA GATGTAGTCT chr19:50651538-50651618 72 1.92e-05 TGCGAGGGAA TGCTGGGA A chr1:10706565-10706645 72 1.92e-05 GAGCATTGCA TGCTGGGA C chr4:104020997-104021077 40 1.92e-05 TAATAATGCA TGCTGGGA TTTGTAGTTT chr19:507895-507975 55 1.92e-05 GCCCGGGGCT TGCTGGGA GTTGTAGTGC chr17:40559677-40559757 49 1.92e-05 GCACAGGGCA TGCTGGGA CTTGTAGTCT chr19:55690517-55690597 56 1.92e-05 CCGCGAGTCA TGCTGGGA GTTGTAGTAT chr19:51142565-51142645 60 1.92e-05 CTGCAGGATC TGCTGGGA GTTGAAGTCC chr19:54682369-54682449 60 1.92e-05 CCCTGGGGCC TGCTGGGA GATGTAGTTC chr19:55831279-55831359 66 1.92e-05 CCACGGGGCA TGCTGGGA GTTGTAG chr19:49416530-49416610 65 1.92e-05 CCCCAGGGTC TGCTGGGA GTTGTAGT chr1:15288464-15288544 48 3.30e-05 atgcagaggg ttctggga aatgtagttt chr2:86332681-86332761 71 3.30e-05 GCAAAAGCGC TTCTGGGA AT chr19:44488242-44488322 64 3.30e-05 ATTCGGGGGA TTCTGGGA AGTGTAGTC chr4:185265099-185265179 60 3.30e-05 tggctgggga ttctggga aatgtagttt chr11:134123307-13412338 1 3.30e-05 . TTCTGGGA ATTGTAGTCC chr18:56806959-56807039 14 3.30e-05 CCCCGCAGCA TTCTGGGA GTGGTAGTTT chr3:69788441-69788521 24 3.30e-05 CCGCCTGGCC TTCTGGGA GCTGTAGTTT chr19:55677446-55677526 65 3.30e-05 CCTCTGAGTA TTCTGGGA TTCGCAGT chr9:72435534-72435614 62 3.30e-05 CCTCACTGCA TTCTGGGA AATGTAGTTT chr19:49248613-49248693 63 3.30e-05 GCCCGTTGCC TTCTGGGA GTTGTAGTTT chr19:49228264-49228344 53 3.30e-05 CACCAAAGTC TTCTGGGA GTTGTAGTCC chr19:49486859-49486939 59 3.30e-05 GTCAAAGGCC TTCTGGGA GTTGTAGTTC chr2:27319261-27319341 12 3.30e-05 CTGCAAGGGA TTCTGGGA AGTGTAGGCT chr6:31866310-31866390 25 3.30e-05 ATTAAAGGCC TTCTGGGA ACTGTAGTTC chr19:49310030-49310110 64 3.30e-05 CCCTGGAGGA TTCTGGGA CATGCAGTT chr11:66138868-66138948 60 6.60e-05 GGGAGTCGGC TGATGGGA ATTGTAGTTC chr11:66035883-66035963 36 6.60e-05 GCGCCAGCAG TGATGGGA GTGGGCGCGG chr12:56710133-56710213 72 6.60e-05 TCTCAAGCTA TCCTGGGA C chr17:4634603-4634683 61 6.60e-05 GCGCTGAGCA TCCTGGGA ATCGTAGTGC chr5:74807639-74807719 66 6.60e-05 TCGCGCAGCC TCCTGGGA GTTGTAG chr2:54950536-54950616 7 6.60e-05 GCGGAA TCCTGGGA CTTGTGGTCC chr1:205744602-205744682 72 6.60e-05 CCGCGAAGcc tcctggga a chr17:7591572-7591652 63 6.60e-05 CCCTAGGGCT TGATGGGA ACGGGAAACC chr11:64387367-64387447 39 6.60e-05 ACCCAAGAAC TGATGGGA GTTGTAGTTC chr20:48732488-48732568 55 6.60e-05 GCGCAGTGCC TGATGGGA GTTGTAGTAC chr19:55815807-55815887 62 6.60e-05 TCCTAGAGCC TCCTGGGA GTTGTAGTCC chr19:49385146-49385226 61 6.60e-05 GCTCAAGTGA TGATGGGA GATGTAGTTC chr19:55709057-55709137 62 6.60e-05 CCCCATGGTG TGATGGGA TTTGTAGTCC chr19:54411492-54411572 61 6.60e-05 CCGCCAGGGC TGATGGGA AATGTAGTCT chr19:54396427-54396507 67 6.60e-05 CCCCAGGGTC TGATGGGA ATTATA chr19:49362005-49362085 70 6.60e-05 CCCTGAGGCC TGATGGGA AAC chr19:49017223-49017303 23 7.61e-05 AAGCAGAGGC TTATGGGA GGTGTAGTCC chr17:7118413-7118493 67 7.61e-05 CCTCGGGGCC TTATGGGA GTTGGA chr19:49947073-49947153 55 1.03e-04 CTCCGAGGGC CGCTGGGA GATGTAGTTC chr3:50388504-50388584 70 1.03e-04 GCGTGGTACA CGCTGGGA TTT chr6:110501301-110501381 52 1.03e-04 CCGCGCTGCA CGCTGGGA GTGCAGGACC chr1:31327139-31327219 49 1.03e-04 ctgcaaagca cgctggga aacgtagtct chr5:178157719-178157799 16 1.03e-04 CCGCTGAGGC CGCTGGGA AATGGAGTCC chr11:46134679-46134759 65 1.16e-04 CTGCAATGCA TACTGGGA CTTGTAGT chr11:125773098-12577317 44 1.30e-04 GCCCGAGCCC TCATGGGA GGTGTAGTCC chr19:50836848-50836928 52 1.30e-04 GCGAGGGCCT TCATGGGA CTCGTAGTAC chr8:82755015-82755095 67 1.30e-04 ATACTTTGCA TCATGGGA CTTGTA chr17:7358821-7358901 63 1.30e-04 TGGTTGAGCA TCATGGGA GTTGTAGTAC chr19:55816998-55817078 61 1.30e-04 CTCCTGGGGC TCATGGGA TTTGTAGTTT chr19:54480865-54480945 64 1.30e-04 TCACGGGGTC TCATGGGA AATGTAGTC chr12:121488698-12148877 40 1.57e-04 ctgcaaggga ggctggga aatgtagtct chr17:17653424-17653504 50 1.57e-04 ctgcaaggaa ggctggga aatgtagtcc chr2:10552681-10552761 55 1.57e-04 ctgcaaggga ggctggga aatgtagtcc chr10:73083348-73083428 37 1.57e-04 ttgcagagca ggctggga aatgtagtct chr20:21077065-21077145 53 1.57e-04 ctgcaaggga ggctggga aatgtagttc chr1:20767420-20767500 53 1.57e-04 ctgcaaggga ggctggga aatgtagtct chr6:15245626-15245706 48 1.57e-04 TTGCGGGGCA GGCTGGGA ATTGTAGTTC chr10:72288704-72288784 52 1.57e-04 ttgcaaggga ggctggga aatgtagtct chr10:103892659-10389273 54 2.02e-04 CCGCACGGCT CTCTGGGA TTCGTAGTCT chr1:17338465-17338545 31 2.02e-04 GCGCCGGGGC TGCCGGGA CTTGTAGTCC chr19:10828064-10828144 38 2.02e-04 CTGAGATGCG CTCTGGGA CTTGTAGTTT chr15:40986899-40986979 37 2.02e-04 CGGCGATGCA TGCCGGGA GATGTAGTCC chr15:41099689-41099769 39 2.02e-04 GCGCCTAGCC CTCTGGGA ATTGTGTTCT chr11:113644472-11364455 3 2.02e-04 CC TGCCGGGA AACGGAGTCT chr1:156052280-156052360 46 2.02e-04 gcccggggcA TGCCGGGA GTTGTAGTTT chr15:75182310-75182390 60 2.02e-04 CCGCGGGGGC TGCCGGGA AAGGCATACG chr9:15422715-15422795 23 2.02e-04 GCCCATGGCC TGCCGGGA AATGTAGTTT chrX:134478623-134478703 50 2.02e-04 GCGTGTGGCC TGCCGGGA GATGTAGTCC chr18:9913573-9913653 70 2.02e-04 GCAGGGGGCA TGCCGGGA GTT chr12:110151312-11015139 66 2.02e-04 GCGCGCAGCA TGCCGGGA GTTGCAG chr12:32832079-32832159 66 2.02e-04 GCGCATGGCC TGCCGGGA GGGGGCA chr1:47799895-47799975 62 2.02e-04 gcgcgcggcg TGCCGGGA CTTGTAGTCC chr6:44101522-44101602 48 2.02e-04 GAGCATGGCA CTCTGGGA GTTGTAGTGC chr22:41840465-41840545 4 2.02e-04 GCA CTCTGGGA ATTGTAGTCC chr19:38270214-38270294 29 2.02e-04 TCCCGTTGCC CTCTGGGA AATGTAGTTT chr2:26296438-26296518 18 2.21e-04 ttgcaaggga gtctggga aatgtagttt chr1:18779233-18779313 45 2.21e-04 ctgcaaaggg gtctggga aatgtagtca chr14:81408130-81408210 3 2.21e-04 CC GTCTGGGA GTTGTAGTCC chr19:4066019-4066099 21 2.67e-04 GCGCGGGGCA CCCTGGGA CTTGTAGTCC chr16:58426726-58426806 26 2.67e-04 GGCCCCTCGG CCCTGGGA CGCCGCATCG chr20:20693558-20693638 31 2.67e-04 GTCTTCGGCA CGATGGGA GTCAGTGGGC chr14:24701763-24701843 54 2.67e-04 GCCCGTTTCC CCCTGGGA GTTGTAGTCT chr10:104262578-10426265 56 2.67e-04 ATGCGCAGTA CCCTGGGA TTTGTGGTCT chr11:65635655-65635735 63 2.67e-04 CCCCAAAGCC CCCTGGGA GACGTAGTTT chr19:49250488-49250568 70 2.96e-04 CCTCATAGCT TTCCGGGA AAT chr4:185585799-185585879 52 3.94e-04 ctgtagagga gcctggga aatgtagtct chr21:35402526-35402606 39 3.94e-04 cagcaaggga agctggga aatgtagttt chr19:2456998-2457078 3 3.94e-04 CA GCCTGGGA CTGGTAGTCC chr10:71754211-71754291 48 3.94e-04 ctgcaaaggc agctggga aatgtagtct chr3:141365812-141365892 24 3.94e-04 tggcaaaggg gcctggga aatgtagttt chr2:136288406-136288486 65 3.94e-04 GGGAAAAGCA TGTTGGGA ATCGTAGT chr16:29687574-29687654 55 3.94e-04 gtgcagagga agctggga aatgtagttt chr1:234812098-234812178 7 3.94e-04 gattct ggatggga agccccggag chr13:52157976-52158056 65 3.94e-04 GCCTGGTGCA TGTTGGGA GCAGTAAG chr3:49466718-49466798 49 4.54e-04 GAACTACAAA TCCCGGGA GGCCCCGCGT chr17:40273371-40273451 46 4.54e-04 GCGCGGCGCA TGACGGGA GTTGTAGTCT chr4:2538121-2538201 21 4.54e-04 TCGCAAGGCC TGACGGGA ATCGTGGTCC chr1:155990742-155990822 48 4.95e-04 GCCCAATGCC TTGTGGGA GTTGTAGTTC chr4:174291896-174291976 1 4.95e-04 . TGCTAGGA TTAGTAGTTC chrX:106045769-106045849 7 4.95e-04 AGTGTA TTGTGGGA AGGGTAGTCC chr3:98241872-98241952 66 4.95e-04 GCGCGGCGCA TTGTGGGA GATGTAG chr10:38383162-38383242 5 4.95e-04 GGGC TTGTGGGA AATGTAGTCT chr19:49013930-49014010 70 4.95e-04 GCCCAAGGCA TTGTGGGA GTT chr1:156308548-156308628 69 5.52e-04 TTTCCGGGCA CACTGGGA GTTG chr1:154979439-154979519 52 5.52e-04 TTGTGGTGCA CACTGGGA GTTGTAGTCC chr16:58664407-58664487 64 5.98e-04 GAGCAGTGCA TGCTGGGG GTTGTAGTC chr1:154842888-154842968 49 6.50e-04 GCGCAGCGAG GACTGGGA ACTGTAGTTT chr20:986451-986531 57 6.50e-04 ctgcaagggt gactggga aatgtagtcc chr11:64456049-64456129 28 6.50e-04 GGTCTGGCGC GACTGGGA ACTACAACTC chr6:41703397-41703477 58 7.72e-04 CCGCTAGGCA CGCCGGGA TTTGTAGTCC chr16:57728647-57728727 7 7.72e-04 CATGAA ACCTGGGA AGACTACATT chr14:82000459-82000539 57 7.72e-04 CGGGGGGTGC TCTTGGGA AACGTAGTCC chr6:6890960-6891040 48 7.72e-04 gagcaagggg acctggga aatgtagttc chr19:54382689-54382769 11 7.72e-04 TCGCGGGGCA CGCCGGGA GGCGGAGTTC chr6:157801084-157801164 18 8.11e-04 TCGCGGGGGA TGCAGGGA CTTGTAGTTT chr11:74109856-74109936 3 8.49e-04 CC TCACGGGA GTTGTAGTTC chr2:39005284-39005364 19 8.49e-04 AAACAGAGGT TTCTGGGG GAAGGAAGTG chr19:38397749-38397829 7 9.33e-04 TACCGT TCCTAGGA GGCAGCGCGG chr19:49851181-49851261 64 9.97e-04 aagttctggc caatggga tgtgaccag chr4:6374781-6374861 72 9.97e-04 tagttctgac caatggga t chr19:41084568-41084648 22 9.97e-04 CTTGGGCTGA TGCTTGGA AAGGAAGTTG chr22:33300162-33300242 71 9.97e-04 gagttctggc caatggga tg chr10:126490305-12649038 68 1.08e-03 CCGCGGGGCA TGATGGGG TAGCT chr19:49224361-49224441 11 1.08e-03 CCCCAGCAAC TCCTGGGG CGGGGTCCGT chr8:124054111-124054191 55 1.08e-03 CCGCTGGGCC TCCTGGGG CCTGTAGTCT chr17:21226449-21226529 44 1.12e-03 ccgcaaagga cgttggga aatgtagtct chr19:46027147-46027227 62 1.30e-03 TTAAGCACCC TTATAGGA GAGTCAGGGC chr3:183735751-183735831 3 1.37e-03 GC TGAAGGGA ACTGTAGTCC chr16:46918121-46918201 20 1.47e-03 GCGCGGGGCG CTGTGGGA CTTGTAGTTC chrX:70315607-70315687 11 1.61e-03 CCGCGAAGCA GGACGGGA GATGTAGTCC chr4:6585013-6585093 42 1.67e-03 cagagtggtg tcatgtga cctctaccag chr12:119667749-11966782 59 1.67e-03 caaggtcgaa tcatgtga ctaagttcta chr19:14743226-14743306 63 1.67e-03 ctgggtgtta tcatgtga caaagatcag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:35177274-35177354 1.9e-05 48_[+2]_24 chr11:69444969-69445049 1.9e-05 57_[+2]_15 chr12:117330310-11733039 1.9e-05 45_[+2]_27 chr2:18741923-18742003 1.9e-05 48_[+2]_24 chr16:9147098-9147178 1.9e-05 54_[+2]_18 chr19:48832876-48832956 1.9e-05 45_[+2]_27 chr2:241525743-241525823 1.9e-05 45_[+2]_27 chr12:88535972-88536052 1.9e-05 53_[+2]_19 chr19:48866434-48866514 1.9e-05 65_[+2]_7 chr17:72186455-72186535 1.9e-05 52_[+2]_20 chr17:40075332-40075412 1.9e-05 53_[+2]_19 chr2:74753493-74753573 1.9e-05 38_[+2]_34 chr2:202316292-202316372 1.9e-05 53_[+2]_19 chr19:7616377-7616457 1.9e-05 1_[+2]_71 chr16:33569517-33569597 1.9e-05 52_[+2]_20 chr6:43215023-43215103 1.9e-05 57_[+2]_15 chr12:49449920-49450000 1.9e-05 33_[+2]_39 chr4:7075467-7075547 1.9e-05 52_[+2]_20 chr17:7094948-7095028 1.9e-05 53_[+2]_19 chr2:23598478-23598558 1.9e-05 27_[+2]_45 chr19:49422141-49422221 1.9e-05 68_[+2]_4 chr13:31736502-31736582 1.9e-05 64_[+2]_8 chr19:48907013-48907093 1.9e-05 13_[+2]_59 chr19:50651538-50651618 1.9e-05 71_[+2]_1 chr1:10706565-10706645 1.9e-05 71_[+2]_1 chr4:104020997-104021077 1.9e-05 39_[+2]_33 chr19:507895-507975 1.9e-05 54_[+2]_18 chr17:40559677-40559757 1.9e-05 48_[+2]_24 chr19:55690517-55690597 1.9e-05 55_[+2]_17 chr19:51142565-51142645 1.9e-05 59_[+2]_13 chr19:54682369-54682449 1.9e-05 59_[+2]_13 chr19:55831279-55831359 1.9e-05 65_[+2]_7 chr19:49416530-49416610 1.9e-05 64_[+2]_8 chr1:15288464-15288544 3.3e-05 47_[+2]_25 chr2:86332681-86332761 3.3e-05 70_[+2]_2 chr19:44488242-44488322 3.3e-05 63_[+2]_9 chr4:185265099-185265179 3.3e-05 59_[+2]_13 chr11:134123307-13412338 3.3e-05 [+2]_72 chr18:56806959-56807039 3.3e-05 13_[+2]_59 chr3:69788441-69788521 3.3e-05 23_[+2]_49 chr19:55677446-55677526 3.3e-05 64_[+2]_8 chr9:72435534-72435614 3.3e-05 61_[+2]_11 chr19:49248613-49248693 3.3e-05 62_[+2]_10 chr19:49228264-49228344 3.3e-05 52_[+2]_20 chr19:49486859-49486939 3.3e-05 58_[+2]_14 chr2:27319261-27319341 3.3e-05 11_[+2]_61 chr6:31866310-31866390 3.3e-05 24_[+2]_48 chr19:49310030-49310110 3.3e-05 63_[+2]_9 chr11:66138868-66138948 6.6e-05 59_[+2]_13 chr11:66035883-66035963 6.6e-05 35_[+2]_37 chr12:56710133-56710213 6.6e-05 71_[+2]_1 chr17:4634603-4634683 6.6e-05 60_[+2]_12 chr5:74807639-74807719 6.6e-05 65_[+2]_7 chr2:54950536-54950616 6.6e-05 6_[+2]_66 chr1:205744602-205744682 6.6e-05 71_[+2]_1 chr17:7591572-7591652 6.6e-05 62_[+2]_10 chr11:64387367-64387447 6.6e-05 38_[+2]_34 chr20:48732488-48732568 6.6e-05 54_[+2]_18 chr19:55815807-55815887 6.6e-05 61_[+2]_11 chr19:49385146-49385226 6.6e-05 60_[+2]_12 chr19:55709057-55709137 6.6e-05 61_[+2]_11 chr19:54411492-54411572 6.6e-05 60_[+2]_12 chr19:54396427-54396507 6.6e-05 66_[+2]_6 chr19:49362005-49362085 6.6e-05 69_[+2]_3 chr19:49017223-49017303 7.6e-05 22_[+2]_50 chr17:7118413-7118493 7.6e-05 66_[+2]_6 chr19:49947073-49947153 0.0001 54_[+2]_18 chr3:50388504-50388584 0.0001 69_[+2]_3 chr6:110501301-110501381 0.0001 51_[+2]_21 chr1:31327139-31327219 0.0001 48_[+2]_24 chr5:178157719-178157799 0.0001 15_[+2]_57 chr11:46134679-46134759 0.00012 64_[+2]_8 chr11:125773098-12577317 0.00013 43_[+2]_29 chr19:50836848-50836928 0.00013 51_[+2]_21 chr8:82755015-82755095 0.00013 66_[+2]_6 chr17:7358821-7358901 0.00013 62_[+2]_10 chr19:55816998-55817078 0.00013 60_[+2]_12 chr19:54480865-54480945 0.00013 63_[+2]_9 chr12:121488698-12148877 0.00016 39_[+2]_33 chr17:17653424-17653504 0.00016 49_[+2]_23 chr2:10552681-10552761 0.00016 54_[+2]_18 chr10:73083348-73083428 0.00016 36_[+2]_36 chr20:21077065-21077145 0.00016 52_[+2]_20 chr1:20767420-20767500 0.00016 52_[+2]_20 chr6:15245626-15245706 0.00016 47_[+2]_25 chr10:72288704-72288784 0.00016 51_[+2]_21 chr10:103892659-10389273 0.0002 53_[+2]_19 chr1:17338465-17338545 0.0002 30_[+2]_42 chr19:10828064-10828144 0.0002 37_[+2]_35 chr15:40986899-40986979 0.0002 36_[+2]_36 chr15:41099689-41099769 0.0002 38_[+2]_34 chr11:113644472-11364455 0.0002 2_[+2]_70 chr1:156052280-156052360 0.0002 45_[+2]_27 chr15:75182310-75182390 0.0002 59_[+2]_13 chr9:15422715-15422795 0.0002 22_[+2]_50 chrX:134478623-134478703 0.0002 49_[+2]_23 chr18:9913573-9913653 0.0002 69_[+2]_3 chr12:110151312-11015139 0.0002 65_[+2]_7 chr12:32832079-32832159 0.0002 65_[+2]_7 chr1:47799895-47799975 0.0002 61_[+2]_11 chr6:44101522-44101602 0.0002 47_[+2]_25 chr22:41840465-41840545 0.0002 3_[+2]_69 chr19:38270214-38270294 0.0002 28_[+2]_44 chr2:26296438-26296518 0.00022 17_[+2]_55 chr1:18779233-18779313 0.00022 44_[+2]_28 chr14:81408130-81408210 0.00022 2_[+2]_70 chr19:4066019-4066099 0.00027 20_[+2]_52 chr16:58426726-58426806 0.00027 25_[+2]_47 chr20:20693558-20693638 0.00027 30_[+2]_42 chr14:24701763-24701843 0.00027 53_[+2]_19 chr10:104262578-10426265 0.00027 55_[+2]_17 chr11:65635655-65635735 0.00027 62_[+2]_10 chr19:49250488-49250568 0.0003 69_[+2]_3 chr4:185585799-185585879 0.00039 51_[+2]_21 chr21:35402526-35402606 0.00039 38_[+2]_34 chr19:2456998-2457078 0.00039 2_[+2]_70 chr10:71754211-71754291 0.00039 47_[+2]_25 chr3:141365812-141365892 0.00039 23_[+2]_49 chr2:136288406-136288486 0.00039 64_[+2]_8 chr16:29687574-29687654 0.00039 54_[+2]_18 chr1:234812098-234812178 0.00039 6_[+2]_66 chr13:52157976-52158056 0.00039 64_[+2]_8 chr3:49466718-49466798 0.00045 48_[+2]_24 chr17:40273371-40273451 0.00045 45_[+2]_27 chr4:2538121-2538201 0.00045 20_[+2]_52 chr1:155990742-155990822 0.0005 47_[+2]_25 chr4:174291896-174291976 0.0005 [+2]_72 chrX:106045769-106045849 0.0005 6_[+2]_66 chr3:98241872-98241952 0.0005 65_[+2]_7 chr10:38383162-38383242 0.0005 4_[+2]_68 chr19:49013930-49014010 0.0005 69_[+2]_3 chr1:156308548-156308628 0.00055 68_[+2]_4 chr1:154979439-154979519 0.00055 51_[+2]_21 chr16:58664407-58664487 0.0006 63_[+2]_9 chr1:154842888-154842968 0.00065 48_[+2]_24 chr20:986451-986531 0.00065 56_[+2]_16 chr11:64456049-64456129 0.00065 27_[+2]_45 chr6:41703397-41703477 0.00077 57_[+2]_15 chr16:57728647-57728727 0.00077 6_[+2]_66 chr14:82000459-82000539 0.00077 56_[+2]_16 chr6:6890960-6891040 0.00077 47_[+2]_25 chr19:54382689-54382769 0.00077 10_[+2]_62 chr6:157801084-157801164 0.00081 17_[+2]_55 chr11:74109856-74109936 0.00085 2_[+2]_70 chr2:39005284-39005364 0.00085 18_[+2]_54 chr19:38397749-38397829 0.00093 6_[+2]_66 chr19:49851181-49851261 0.001 63_[+2]_9 chr4:6374781-6374861 0.001 71_[+2]_1 chr19:41084568-41084648 0.001 21_[+2]_51 chr22:33300162-33300242 0.001 70_[+2]_2 chr10:126490305-12649038 0.0011 67_[+2]_5 chr19:49224361-49224441 0.0011 10_[+2]_62 chr8:124054111-124054191 0.0011 54_[+2]_18 chr17:21226449-21226529 0.0011 43_[+2]_29 chr19:46027147-46027227 0.0013 61_[+2]_11 chr3:183735751-183735831 0.0014 2_[+2]_70 chr16:46918121-46918201 0.0015 19_[+2]_53 chrX:70315607-70315687 0.0016 10_[+2]_62 chr4:6585013-6585093 0.0017 41_[+2]_31 chr12:119667749-11966782 0.0017 58_[+2]_14 chr19:14743226-14743306 0.0017 62_[+2]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCTGGGA width=8 seqs=161 chr1:35177274-35177354 ( 49) TGCTGGGA 1 chr11:69444969-69445049 ( 58) TGCTGGGA 1 chr12:117330310-11733039 ( 46) TGCTGGGA 1 chr2:18741923-18742003 ( 49) TGCTGGGA 1 chr16:9147098-9147178 ( 55) TGCTGGGA 1 chr19:48832876-48832956 ( 46) TGCTGGGA 1 chr2:241525743-241525823 ( 46) TGCTGGGA 1 chr12:88535972-88536052 ( 54) TGCTGGGA 1 chr19:48866434-48866514 ( 66) TGCTGGGA 1 chr17:72186455-72186535 ( 53) TGCTGGGA 1 chr17:40075332-40075412 ( 54) TGCTGGGA 1 chr2:74753493-74753573 ( 39) TGCTGGGA 1 chr2:202316292-202316372 ( 54) TGCTGGGA 1 chr19:7616377-7616457 ( 2) TGCTGGGA 1 chr16:33569517-33569597 ( 53) TGCTGGGA 1 chr6:43215023-43215103 ( 58) TGCTGGGA 1 chr12:49449920-49450000 ( 34) TGCTGGGA 1 chr4:7075467-7075547 ( 53) TGCTGGGA 1 chr17:7094948-7095028 ( 54) TGCTGGGA 1 chr2:23598478-23598558 ( 28) TGCTGGGA 1 chr19:49422141-49422221 ( 69) TGCTGGGA 1 chr13:31736502-31736582 ( 65) TGCTGGGA 1 chr19:48907013-48907093 ( 14) TGCTGGGA 1 chr19:50651538-50651618 ( 72) TGCTGGGA 1 chr1:10706565-10706645 ( 72) TGCTGGGA 1 chr4:104020997-104021077 ( 40) TGCTGGGA 1 chr19:507895-507975 ( 55) TGCTGGGA 1 chr17:40559677-40559757 ( 49) TGCTGGGA 1 chr19:55690517-55690597 ( 56) TGCTGGGA 1 chr19:51142565-51142645 ( 60) TGCTGGGA 1 chr19:54682369-54682449 ( 60) TGCTGGGA 1 chr19:55831279-55831359 ( 66) TGCTGGGA 1 chr19:49416530-49416610 ( 65) TGCTGGGA 1 chr1:15288464-15288544 ( 48) TTCTGGGA 1 chr2:86332681-86332761 ( 71) TTCTGGGA 1 chr19:44488242-44488322 ( 64) TTCTGGGA 1 chr4:185265099-185265179 ( 60) TTCTGGGA 1 chr11:134123307-13412338 ( 1) TTCTGGGA 1 chr18:56806959-56807039 ( 14) TTCTGGGA 1 chr3:69788441-69788521 ( 24) TTCTGGGA 1 chr19:55677446-55677526 ( 65) TTCTGGGA 1 chr9:72435534-72435614 ( 62) TTCTGGGA 1 chr19:49248613-49248693 ( 63) TTCTGGGA 1 chr19:49228264-49228344 ( 53) TTCTGGGA 1 chr19:49486859-49486939 ( 59) TTCTGGGA 1 chr2:27319261-27319341 ( 12) TTCTGGGA 1 chr6:31866310-31866390 ( 25) TTCTGGGA 1 chr19:49310030-49310110 ( 64) TTCTGGGA 1 chr11:66138868-66138948 ( 60) TGATGGGA 1 chr11:66035883-66035963 ( 36) TGATGGGA 1 chr12:56710133-56710213 ( 72) TCCTGGGA 1 chr17:4634603-4634683 ( 61) TCCTGGGA 1 chr5:74807639-74807719 ( 66) TCCTGGGA 1 chr2:54950536-54950616 ( 7) TCCTGGGA 1 chr1:205744602-205744682 ( 72) TCCTGGGA 1 chr17:7591572-7591652 ( 63) TGATGGGA 1 chr11:64387367-64387447 ( 39) TGATGGGA 1 chr20:48732488-48732568 ( 55) TGATGGGA 1 chr19:55815807-55815887 ( 62) TCCTGGGA 1 chr19:49385146-49385226 ( 61) TGATGGGA 1 chr19:55709057-55709137 ( 62) TGATGGGA 1 chr19:54411492-54411572 ( 61) TGATGGGA 1 chr19:54396427-54396507 ( 67) TGATGGGA 1 chr19:49362005-49362085 ( 70) TGATGGGA 1 chr19:49017223-49017303 ( 23) TTATGGGA 1 chr17:7118413-7118493 ( 67) TTATGGGA 1 chr19:49947073-49947153 ( 55) CGCTGGGA 1 chr3:50388504-50388584 ( 70) CGCTGGGA 1 chr6:110501301-110501381 ( 52) CGCTGGGA 1 chr1:31327139-31327219 ( 49) CGCTGGGA 1 chr5:178157719-178157799 ( 16) CGCTGGGA 1 chr11:46134679-46134759 ( 65) TACTGGGA 1 chr11:125773098-12577317 ( 44) TCATGGGA 1 chr19:50836848-50836928 ( 52) TCATGGGA 1 chr8:82755015-82755095 ( 67) TCATGGGA 1 chr17:7358821-7358901 ( 63) TCATGGGA 1 chr19:55816998-55817078 ( 61) TCATGGGA 1 chr19:54480865-54480945 ( 64) TCATGGGA 1 chr12:121488698-12148877 ( 40) GGCTGGGA 1 chr17:17653424-17653504 ( 50) GGCTGGGA 1 chr2:10552681-10552761 ( 55) GGCTGGGA 1 chr10:73083348-73083428 ( 37) GGCTGGGA 1 chr20:21077065-21077145 ( 53) GGCTGGGA 1 chr1:20767420-20767500 ( 53) GGCTGGGA 1 chr6:15245626-15245706 ( 48) GGCTGGGA 1 chr10:72288704-72288784 ( 52) GGCTGGGA 1 chr10:103892659-10389273 ( 54) CTCTGGGA 1 chr1:17338465-17338545 ( 31) TGCCGGGA 1 chr19:10828064-10828144 ( 38) CTCTGGGA 1 chr15:40986899-40986979 ( 37) TGCCGGGA 1 chr15:41099689-41099769 ( 39) CTCTGGGA 1 chr11:113644472-11364455 ( 3) TGCCGGGA 1 chr1:156052280-156052360 ( 46) TGCCGGGA 1 chr15:75182310-75182390 ( 60) TGCCGGGA 1 chr9:15422715-15422795 ( 23) TGCCGGGA 1 chrX:134478623-134478703 ( 50) TGCCGGGA 1 chr18:9913573-9913653 ( 70) TGCCGGGA 1 chr12:110151312-11015139 ( 66) TGCCGGGA 1 chr12:32832079-32832159 ( 66) TGCCGGGA 1 chr1:47799895-47799975 ( 62) TGCCGGGA 1 chr6:44101522-44101602 ( 48) CTCTGGGA 1 chr22:41840465-41840545 ( 4) CTCTGGGA 1 chr19:38270214-38270294 ( 29) CTCTGGGA 1 chr2:26296438-26296518 ( 18) GTCTGGGA 1 chr1:18779233-18779313 ( 45) GTCTGGGA 1 chr14:81408130-81408210 ( 3) GTCTGGGA 1 chr19:4066019-4066099 ( 21) CCCTGGGA 1 chr16:58426726-58426806 ( 26) CCCTGGGA 1 chr20:20693558-20693638 ( 31) CGATGGGA 1 chr14:24701763-24701843 ( 54) CCCTGGGA 1 chr10:104262578-10426265 ( 56) CCCTGGGA 1 chr11:65635655-65635735 ( 63) CCCTGGGA 1 chr19:49250488-49250568 ( 70) TTCCGGGA 1 chr4:185585799-185585879 ( 52) GCCTGGGA 1 chr21:35402526-35402606 ( 39) AGCTGGGA 1 chr19:2456998-2457078 ( 3) GCCTGGGA 1 chr10:71754211-71754291 ( 48) AGCTGGGA 1 chr3:141365812-141365892 ( 24) GCCTGGGA 1 chr2:136288406-136288486 ( 65) TGTTGGGA 1 chr16:29687574-29687654 ( 55) AGCTGGGA 1 chr1:234812098-234812178 ( 7) GGATGGGA 1 chr13:52157976-52158056 ( 65) TGTTGGGA 1 chr3:49466718-49466798 ( 49) TCCCGGGA 1 chr17:40273371-40273451 ( 46) TGACGGGA 1 chr4:2538121-2538201 ( 21) TGACGGGA 1 chr1:155990742-155990822 ( 48) TTGTGGGA 1 chr4:174291896-174291976 ( 1) TGCTAGGA 1 chrX:106045769-106045849 ( 7) TTGTGGGA 1 chr3:98241872-98241952 ( 66) TTGTGGGA 1 chr10:38383162-38383242 ( 5) TTGTGGGA 1 chr19:49013930-49014010 ( 70) TTGTGGGA 1 chr1:156308548-156308628 ( 69) CACTGGGA 1 chr1:154979439-154979519 ( 52) CACTGGGA 1 chr16:58664407-58664487 ( 64) TGCTGGGG 1 chr1:154842888-154842968 ( 49) GACTGGGA 1 chr20:986451-986531 ( 57) GACTGGGA 1 chr11:64456049-64456129 ( 28) GACTGGGA 1 chr6:41703397-41703477 ( 58) CGCCGGGA 1 chr16:57728647-57728727 ( 7) ACCTGGGA 1 chr14:82000459-82000539 ( 57) TCTTGGGA 1 chr6:6890960-6891040 ( 48) ACCTGGGA 1 chr19:54382689-54382769 ( 11) CGCCGGGA 1 chr6:157801084-157801164 ( 18) TGCAGGGA 1 chr11:74109856-74109936 ( 3) TCACGGGA 1 chr2:39005284-39005364 ( 19) TTCTGGGG 1 chr19:38397749-38397829 ( 7) TCCTAGGA 1 chr19:49851181-49851261 ( 64) CAATGGGA 1 chr4:6374781-6374861 ( 72) CAATGGGA 1 chr19:41084568-41084648 ( 22) TGCTTGGA 1 chr22:33300162-33300242 ( 71) CAATGGGA 1 chr10:126490305-12649038 ( 68) TGATGGGG 1 chr19:49224361-49224441 ( 11) TCCTGGGG 1 chr8:124054111-124054191 ( 55) TCCTGGGG 1 chr17:21226449-21226529 ( 44) CGTTGGGA 1 chr19:46027147-46027227 ( 62) TTATAGGA 1 chr3:183735751-183735831 ( 3) TGAAGGGA 1 chr16:46918121-46918201 ( 20) CTGTGGGA 1 chrX:70315607-70315687 ( 11) GGACGGGA 1 chr4:6585013-6585093 ( 42) TCATGTGA 1 chr12:119667749-11966782 ( 59) TCATGTGA 1 chr19:14743226-14743306 ( 63) TCATGTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.07239 E= 4.1e-117 -276 -84 -130 171 -191 -58 87 5 -3 134 -297 -308 -408 -129 -1397 205 -349 -1397 174 -508 -1397 -1397 175 -349 -1397 -1397 178 -1397 221 -1397 -323 -1397 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 161 E= 4.1e-117 0.031056 0.161491 0.118012 0.689441 0.055901 0.192547 0.534161 0.217391 0.204969 0.732919 0.037267 0.024845 0.012422 0.118012 0.000000 0.869565 0.018634 0.000000 0.975155 0.006211 0.000000 0.000000 0.981366 0.018634 0.000000 0.000000 1.000000 0.000000 0.968944 0.000000 0.031056 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGGGA MEME-2 regular expression -------------------------------------------------------------------------------- T[GT][CA]TGGGA -------------------------------------------------------------------------------- Time 7.99 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCCAGVA MEME-3 width = 8 sites = 44 llr = 387 E-value = 6.7e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::a:38 pos.-specific C :aaa::4: probability G :::::832 matrix T a::::2:: bits 2.3 * * 2.0 * * 1.8 ***** 1.6 ***** Relative 1.4 ***** * Entropy 1.1 ****** * (12.7 bits) 0.9 ****** * 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel TCCCAGCA consensus TGG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:56915619-56915699 16 1.88e-05 TCGGCCAACA TCCCAGCA TCCTCTGCGC chr19:49148190-49148270 2 1.88e-05 C TCCCAGCA GGCCCCAGTG chr3:4344940-4345020 53 1.88e-05 GGACCACAAG TCCCAGCA TCCACCGCGC chr19:45988706-45988786 17 1.88e-05 CAACTACAAG TCCCAGCA GGCCCCGCGG chr2:86332681-86332761 11 1.88e-05 GAACTACGGC TCCCAGCA GGACAAGCGC chr18:9913573-9913653 1 1.88e-05 . TCCCAGCA AGCACCGCGC chr4:8160670-8160750 55 1.88e-05 GGACTACAAG TCCCAGCA CGCTTCGCGG chr11:74109856-74109936 66 1.88e-05 AGACTACGAC TCCCAGCA GCTCCGC chrX:149736803-149736883 72 1.88e-05 AAAATGGGCT TCCCAGCA G chr17:40559677-40559757 16 1.88e-05 CAACTACACC TCCCAGCA GGCAAGGTGA chr11:46134679-46134759 16 1.88e-05 CAACTACAGG TCCCAGCA TGCAGTGCTC chr19:55816998-55817078 5 1.88e-05 CAAG TCCCAGCA GCCCCTGGGG chr16:81779949-81780029 1 5.14e-05 . tcccagaa aacatctggg chr3:183735751-183735831 66 5.14e-05 GGACTACATT TCCCAGAA GCGCCGG chr16:57728647-57728727 41 5.14e-05 AAGCCTCCTC TCCCAGGA CCGGCGTTCA chr18:71815680-71815760 55 5.14e-05 AAACTACTAT TCCCAGGA AGACGGGGGT chr3:61235795-61235875 19 5.14e-05 AGACTTCGTC TCCCAGGA GACATCTCGC chr19:44809191-44809271 15 5.14e-05 GGACTCCACT TCCCAGAA TTCCTAAGCG chr13:33112985-33113065 60 5.14e-05 AGACTAGGTC TCCCAGAA TCCATGGCGT chr14:59655245-59655325 51 5.14e-05 GGACCACTAC TCCCAGGA GTCTGCGCGC chr2:217277077-217277157 21 5.14e-05 GAACTACAAA TCCCAGAA GACACTGCAG chr19:49422141-49422221 40 5.14e-05 CAAAAACGGC TCCCAGGA GTGGTAGCGT chr17:7358821-7358901 4 5.14e-05 AGT TCCCAGAA GAGTGTGCGG chr13:52157976-52158056 19 5.14e-05 AAACTACGAC TCCCAGGA GGCCACTGGG chr9:72435534-72435614 3 5.14e-05 GA TCCCAGGA TGCAGTTCCC chr19:46027147-46027227 27 5.14e-05 GAACTACAAA TCCCAGAA TACTCTGTTC chr19:55831279-55831359 7 5.14e-05 TACAAG TCCCAGGA GGGCCGGGCG chr11:65635655-65635735 4 6.50e-05 GAT TCCCATCA TCCCTCAGGG chr10:126490305-12649038 12 8.85e-05 AGACTCCACT TCCCATGA TGCCAAGGGG chr19:41084568-41084648 51 8.85e-05 ACACAGCATT TCCCATGA GACAATGGGC chr19:55708325-55708405 11 8.85e-05 AAACTACAAC TCCCATGA GGCCTTGGGC chr19:55709057-55709137 2 8.85e-05 T TCCCATGA GGCTATGGAT chr19:54682369-54682449 1 8.85e-05 . tcccatgA GCCTCCGGGG chr19:49310030-49310110 6 8.85e-05 ACAAC TCCCATGA AGCCCTGGGC chr17:38443831-38443911 25 1.15e-04 AGACTACGCC TCCCAGCG TGCTTTGCGG chr2:202316292-202316372 21 1.15e-04 AGAGCCACTC TCCCAGCG GCCTCCACGG chr19:10828064-10828144 1 1.60e-04 . TCCCAGAG CTGGTTTGCA chr12:88535972-88536052 21 1.60e-04 GGACTTCAAA TCCCAGAG TGCAGTTCTG chr9:99616830-99616910 2 1.60e-04 A TCCCAGAG TGCTGCGCGG chr6:52929630-52929710 8 1.60e-04 CTACAAA TCCCAGAG TGCCTCGCGG chr19:49416530-49416610 6 1.60e-04 ACAAT TCCCAGGG GCCCTTGAGG chr19:55677446-55677526 7 1.73e-04 TACAAA TCCCAGTA GGCGTTCCGC chr16:58664407-58664487 6 1.92e-04 CCCGT TCCCATCG CAGAAGTAAT chr14:24701763-24701843 19 1.92e-04 GAACTACATC TCCCATCG TGCCAGGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:56915619-56915699 1.9e-05 15_[+3]_57 chr19:49148190-49148270 1.9e-05 1_[+3]_71 chr3:4344940-4345020 1.9e-05 52_[+3]_20 chr19:45988706-45988786 1.9e-05 16_[+3]_56 chr2:86332681-86332761 1.9e-05 10_[+3]_62 chr18:9913573-9913653 1.9e-05 [+3]_72 chr4:8160670-8160750 1.9e-05 54_[+3]_18 chr11:74109856-74109936 1.9e-05 65_[+3]_7 chrX:149736803-149736883 1.9e-05 71_[+3]_1 chr17:40559677-40559757 1.9e-05 15_[+3]_57 chr11:46134679-46134759 1.9e-05 15_[+3]_57 chr19:55816998-55817078 1.9e-05 4_[+3]_68 chr16:81779949-81780029 5.1e-05 [+3]_72 chr3:183735751-183735831 5.1e-05 65_[+3]_7 chr16:57728647-57728727 5.1e-05 40_[+3]_32 chr18:71815680-71815760 5.1e-05 54_[+3]_18 chr3:61235795-61235875 5.1e-05 18_[+3]_54 chr19:44809191-44809271 5.1e-05 14_[+3]_58 chr13:33112985-33113065 5.1e-05 59_[+3]_13 chr14:59655245-59655325 5.1e-05 50_[+3]_22 chr2:217277077-217277157 5.1e-05 20_[+3]_52 chr19:49422141-49422221 5.1e-05 39_[+3]_33 chr17:7358821-7358901 5.1e-05 3_[+3]_69 chr13:52157976-52158056 5.1e-05 18_[+3]_54 chr9:72435534-72435614 5.1e-05 2_[+3]_70 chr19:46027147-46027227 5.1e-05 26_[+3]_46 chr19:55831279-55831359 5.1e-05 6_[+3]_66 chr11:65635655-65635735 6.5e-05 3_[+3]_69 chr10:126490305-12649038 8.8e-05 11_[+3]_61 chr19:41084568-41084648 8.8e-05 50_[+3]_22 chr19:55708325-55708405 8.8e-05 10_[+3]_62 chr19:55709057-55709137 8.8e-05 1_[+3]_71 chr19:54682369-54682449 8.8e-05 [+3]_72 chr19:49310030-49310110 8.8e-05 5_[+3]_67 chr17:38443831-38443911 0.00011 24_[+3]_48 chr2:202316292-202316372 0.00011 20_[+3]_52 chr19:10828064-10828144 0.00016 [+3]_72 chr12:88535972-88536052 0.00016 20_[+3]_52 chr9:99616830-99616910 0.00016 1_[+3]_71 chr6:52929630-52929710 0.00016 7_[+3]_65 chr19:49416530-49416610 0.00016 5_[+3]_67 chr19:55677446-55677526 0.00017 6_[+3]_66 chr16:58664407-58664487 0.00019 5_[+3]_67 chr14:24701763-24701843 0.00019 18_[+3]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCCAGVA width=8 seqs=44 chr19:56915619-56915699 ( 16) TCCCAGCA 1 chr19:49148190-49148270 ( 2) TCCCAGCA 1 chr3:4344940-4345020 ( 53) TCCCAGCA 1 chr19:45988706-45988786 ( 17) TCCCAGCA 1 chr2:86332681-86332761 ( 11) TCCCAGCA 1 chr18:9913573-9913653 ( 1) TCCCAGCA 1 chr4:8160670-8160750 ( 55) TCCCAGCA 1 chr11:74109856-74109936 ( 66) TCCCAGCA 1 chrX:149736803-149736883 ( 72) TCCCAGCA 1 chr17:40559677-40559757 ( 16) TCCCAGCA 1 chr11:46134679-46134759 ( 16) TCCCAGCA 1 chr19:55816998-55817078 ( 5) TCCCAGCA 1 chr16:81779949-81780029 ( 1) TCCCAGAA 1 chr3:183735751-183735831 ( 66) TCCCAGAA 1 chr16:57728647-57728727 ( 41) TCCCAGGA 1 chr18:71815680-71815760 ( 55) TCCCAGGA 1 chr3:61235795-61235875 ( 19) TCCCAGGA 1 chr19:44809191-44809271 ( 15) TCCCAGAA 1 chr13:33112985-33113065 ( 60) TCCCAGAA 1 chr14:59655245-59655325 ( 51) TCCCAGGA 1 chr2:217277077-217277157 ( 21) TCCCAGAA 1 chr19:49422141-49422221 ( 40) TCCCAGGA 1 chr17:7358821-7358901 ( 4) TCCCAGAA 1 chr13:52157976-52158056 ( 19) TCCCAGGA 1 chr9:72435534-72435614 ( 3) TCCCAGGA 1 chr19:46027147-46027227 ( 27) TCCCAGAA 1 chr19:55831279-55831359 ( 7) TCCCAGGA 1 chr11:65635655-65635735 ( 4) TCCCATCA 1 chr10:126490305-12649038 ( 12) TCCCATGA 1 chr19:41084568-41084648 ( 51) TCCCATGA 1 chr19:55708325-55708405 ( 11) TCCCATGA 1 chr19:55709057-55709137 ( 2) TCCCATGA 1 chr19:54682369-54682449 ( 1) TCCCATGA 1 chr19:49310030-49310110 ( 6) TCCCATGA 1 chr17:38443831-38443911 ( 25) TCCCAGCG 1 chr2:202316292-202316372 ( 21) TCCCAGCG 1 chr19:10828064-10828144 ( 1) TCCCAGAG 1 chr12:88535972-88536052 ( 21) TCCCAGAG 1 chr9:99616830-99616910 ( 2) TCCCAGAG 1 chr6:52929630-52929710 ( 8) TCCCAGAG 1 chr19:49416530-49416610 ( 6) TCCCAGGG 1 chr19:55677446-55677526 ( 7) TCCCAGTA 1 chr16:58664407-58664487 ( 6) TCCCATCG 1 chr14:24701763-24701843 ( 19) TCCCATCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.24397 E= 6.7e-020 -1210 -1210 -1210 225 -1210 179 -1210 -1210 -1210 179 -1210 -1210 -1210 179 -1210 -1210 225 -1210 -1210 -1210 -1210 -1210 145 -4 25 42 23 -321 192 -1210 -51 -1210 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 44 E= 6.7e-020 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.795455 0.204545 0.250000 0.386364 0.340909 0.022727 0.795455 0.000000 0.204545 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGVA MEME-3 regular expression -------------------------------------------------------------------------------- TCCCA[GT][CGA][AG] -------------------------------------------------------------------------------- Time 11.03 secs. ******************************************************************************** ******************************************************************************** MOTIF RACTACAA MEME-4 width = 8 sites = 39 llr = 349 E-value = 1.3e-016 ******************************************************************************** -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 6a::8:97 pos.-specific C ::a::9:1 probability G 4:::211: matrix T :::a:::2 bits 2.3 * * 2.0 * * 1.8 *** 1.6 ****** Relative 1.4 ****** Entropy 1.1 ******** (12.9 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AACTACAA consensus G T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:45988706-45988786 8 7.16e-06 TCTAGGC AACTACAA GTCCCAGCAG chr3:49466718-49466798 40 7.16e-06 GAGCCTCAAG AACTACAA ATCCCGGGAG chr11:66035883-66035963 3 7.16e-06 CA AACTACAA GCCCCAGAAG chr12:56710133-56710213 53 7.16e-06 CTTTGTGAGC AACTACAA GTCTCAAGCT chr7:150689942-150690022 7 7.16e-06 GCACAG AACTACAA ACCCCAGCAT chr19:55708325-55708405 2 7.16e-06 A AACTACAA CTCCCATGAG chr2:217277077-217277157 12 7.16e-06 TCCCGGCCCG AACTACAA ATCCCAGAAG chr14:36295376-36295456 54 7.16e-06 GAGACCTACG AACTACAA CTCCCGGCAA chr19:46027147-46027227 18 7.16e-06 CAGCCACAGG AACTACAA ATCCCAGAAT chr11:66138868-66138948 14 1.71e-05 CTCCGGAGCG GACTACAA CCCCGATCAC chr4:8160670-8160750 46 1.71e-05 GGGGCGATCG GACTACAA GTCCCAGCAC chr5:55008169-55008249 72 1.71e-05 CGCCGCTACG GACTACAA C chr11:134123307-13412338 69 1.71e-05 CTCGTGGGAG GACTACAA CCCC chr5:138775204-138775284 54 1.71e-05 CGGGGCACTG GACTACAA CTCCCGGCAG chr2:39005284-39005364 2 1.71e-05 G GACTACAA AACAGAGGTT chr1:154979439-154979519 11 1.71e-05 TCTCAAGGGG GACTACAA CTCCCAAGGT chr14:24701763-24701843 10 2.43e-05 GGCAGAACG AACTACAT CTCCCATCGT chr19:51152940-51153020 53 2.43e-05 CTGGACTCAG AACTACAT TTCCCATGAG chr11:60681316-60681396 40 2.43e-05 GTAGCTCTAG AACTACAT GACCCAAAAT chr7:1465352-1465432 20 2.43e-05 ccccagaggg aactacat tccccagcat chr19:37569234-37569314 7 3.42e-05 GCGCTG GACTACAT TTCCCAGAGG chr3:183735751-183735831 57 3.42e-05 CGCGGCGAAG GACTACAT TTCCCAGAAG chr14:81408130-81408210 71 4.41e-05 CCCGAAAAGG AACTGCAA AT chr11:46134679-46134759 53 4.41e-05 GTTAAGCAAA AACTGCAA TGCATACTGG chr12:133532880-13353296 39 5.40e-05 CTCGCGCTGG AACTACAC TTCCCGGGGG chr17:40559677-40559757 7 5.40e-05 TTACCC AACTACAC CTCCCAGCAG chr17:72186455-72186535 41 6.77e-05 ggtcacaaat gactgcaa agagtgctgg chr1:18779233-18779313 33 6.77e-05 acccccacat gactgcaa aggggtctgg chr22:29168600-29168680 17 6.77e-05 AGTCCGGAAG GACTGCAA ATCCCGGCAT chr7:20257087-20257167 43 7.76e-05 AAGGCAAGAG AACTACGA TACCCACAAT chr13:52157976-52158056 10 7.76e-05 GCTCCAAGA AACTACGA CTCCCAGGAG chr6:10147347-10147427 31 9.13e-05 actttgcaag gactacac ctcccaggat chr11:74109856-74109936 57 1.22e-04 CCGCCGCCGA GACTACGA CTCCCAGCAG chr19:50030969-50031049 26 1.32e-04 GAGGCGTTGT GACTAGAA CAGCTGGAGG chr2:23598478-23598558 1 1.32e-04 . gactagaa aattgtctaa chr16:68482612-68482692 65 1.46e-04 AACAGAGCGG GACTGCAT TTCCCAGA chr19:50501072-50501152 9 1.56e-04 agcataaa aactacgt ttcccagctt chr2:38892992-38893072 29 1.66e-04 ACCTCCCAAA AACTACCA TTCCCAACAT chr11:107436435-10743651 23 1.79e-04 TGTTGGAGAA AACTGCAC TACATTTCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:45988706-45988786 7.2e-06 7_[+4]_65 chr3:49466718-49466798 7.2e-06 39_[+4]_33 chr11:66035883-66035963 7.2e-06 2_[+4]_70 chr12:56710133-56710213 7.2e-06 52_[+4]_20 chr7:150689942-150690022 7.2e-06 6_[+4]_66 chr19:55708325-55708405 7.2e-06 1_[+4]_71 chr2:217277077-217277157 7.2e-06 11_[+4]_61 chr14:36295376-36295456 7.2e-06 53_[+4]_19 chr19:46027147-46027227 7.2e-06 17_[+4]_55 chr11:66138868-66138948 1.7e-05 13_[+4]_59 chr4:8160670-8160750 1.7e-05 45_[+4]_27 chr5:55008169-55008249 1.7e-05 71_[+4]_1 chr11:134123307-13412338 1.7e-05 68_[+4]_4 chr5:138775204-138775284 1.7e-05 53_[+4]_19 chr2:39005284-39005364 1.7e-05 1_[+4]_71 chr1:154979439-154979519 1.7e-05 10_[+4]_62 chr14:24701763-24701843 2.4e-05 9_[+4]_63 chr19:51152940-51153020 2.4e-05 52_[+4]_20 chr11:60681316-60681396 2.4e-05 39_[+4]_33 chr7:1465352-1465432 2.4e-05 19_[+4]_53 chr19:37569234-37569314 3.4e-05 6_[+4]_66 chr3:183735751-183735831 3.4e-05 56_[+4]_16 chr14:81408130-81408210 4.4e-05 70_[+4]_2 chr11:46134679-46134759 4.4e-05 52_[+4]_20 chr12:133532880-13353296 5.4e-05 38_[+4]_34 chr17:40559677-40559757 5.4e-05 6_[+4]_66 chr17:72186455-72186535 6.8e-05 40_[+4]_32 chr1:18779233-18779313 6.8e-05 32_[+4]_40 chr22:29168600-29168680 6.8e-05 16_[+4]_56 chr7:20257087-20257167 7.8e-05 42_[+4]_30 chr13:52157976-52158056 7.8e-05 9_[+4]_63 chr6:10147347-10147427 9.1e-05 30_[+4]_42 chr11:74109856-74109936 0.00012 56_[+4]_16 chr19:50030969-50031049 0.00013 25_[+4]_47 chr2:23598478-23598558 0.00013 [+4]_72 chr16:68482612-68482692 0.00015 64_[+4]_8 chr19:50501072-50501152 0.00016 8_[+4]_64 chr2:38892992-38893072 0.00017 28_[+4]_44 chr11:107436435-10743651 0.00018 22_[+4]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RACTACAA width=8 seqs=39 chr19:45988706-45988786 ( 8) AACTACAA 1 chr3:49466718-49466798 ( 40) AACTACAA 1 chr11:66035883-66035963 ( 3) AACTACAA 1 chr12:56710133-56710213 ( 53) AACTACAA 1 chr7:150689942-150690022 ( 7) AACTACAA 1 chr19:55708325-55708405 ( 2) AACTACAA 1 chr2:217277077-217277157 ( 12) AACTACAA 1 chr14:36295376-36295456 ( 54) AACTACAA 1 chr19:46027147-46027227 ( 18) AACTACAA 1 chr11:66138868-66138948 ( 14) GACTACAA 1 chr4:8160670-8160750 ( 46) GACTACAA 1 chr5:55008169-55008249 ( 72) GACTACAA 1 chr11:134123307-13412338 ( 69) GACTACAA 1 chr5:138775204-138775284 ( 54) GACTACAA 1 chr2:39005284-39005364 ( 2) GACTACAA 1 chr1:154979439-154979519 ( 11) GACTACAA 1 chr14:24701763-24701843 ( 10) AACTACAT 1 chr19:51152940-51153020 ( 53) AACTACAT 1 chr11:60681316-60681396 ( 40) AACTACAT 1 chr7:1465352-1465432 ( 20) AACTACAT 1 chr19:37569234-37569314 ( 7) GACTACAT 1 chr3:183735751-183735831 ( 57) GACTACAT 1 chr14:81408130-81408210 ( 71) AACTGCAA 1 chr11:46134679-46134759 ( 53) AACTGCAA 1 chr12:133532880-13353296 ( 39) AACTACAC 1 chr17:40559677-40559757 ( 7) AACTACAC 1 chr17:72186455-72186535 ( 41) GACTGCAA 1 chr1:18779233-18779313 ( 33) GACTGCAA 1 chr22:29168600-29168680 ( 17) GACTGCAA 1 chr7:20257087-20257167 ( 43) AACTACGA 1 chr13:52157976-52158056 ( 10) AACTACGA 1 chr6:10147347-10147427 ( 31) GACTACAC 1 chr11:74109856-74109936 ( 57) GACTACGA 1 chr19:50030969-50031049 ( 26) GACTAGAA 1 chr2:23598478-23598558 ( 1) GACTAGAA 1 chr16:68482612-68482692 ( 65) GACTGCAT 1 chr19:50501072-50501152 ( 9) AACTACGT 1 chr2:38892992-38893072 ( 29) AACTACCA 1 chr11:107436435-10743651 ( 23) AACTGCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.3267 E= 1.3e-016 143 -1193 58 -1193 225 -1193 -1193 -1193 -1193 179 -1193 -1193 -1193 -1193 -1193 225 197 -1193 -70 -1193 -1193 172 -251 -1193 205 -349 -151 -1193 172 -149 -1193 -3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 39 E= 1.3e-016 0.564103 0.000000 0.435897 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.820513 0.000000 0.179487 0.000000 0.000000 0.948718 0.051282 0.000000 0.871795 0.025641 0.102564 0.000000 0.692308 0.102564 0.000000 0.205128 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACTACAA MEME-4 regular expression -------------------------------------------------------------------------------- [AG]ACTACA[AT] -------------------------------------------------------------------------------- Time 13.97 secs. ******************************************************************************** ******************************************************************************** MOTIF GYCAYRTG MEME-5 width = 8 sites = 40 llr = 344 E-value = 7.4e-011 ******************************************************************************** -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2::a:5:: pos.-specific C :4a:6::: probability G 8::::5:a matrix T :6::4:a: bits 2.3 * * 2.0 * * 1.8 ** ** 1.6 ** ** Relative 1.4 ** ** Entropy 1.1 **** *** (12.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GTCACATG consensus C TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:21226449-21226529 15 2.37e-05 gcagtattgg gtcacatg gccagccgtg chr1:35177274-35177354 20 2.37e-05 ccagcactca gtcacatg attcaacctt chr11:69444969-69445049 29 2.37e-05 ctaggactta gtcacatg gccatcccct chr21:35434463-35434543 27 2.37e-05 cccaaacata gtcacatg gtgacagcca chr21:35402526-35402606 10 2.37e-05 ccaggccca gtcatatg ccctcaacta chr2:10552681-10552761 26 2.37e-05 ccagagtgta gtcacatg gtaccaccta chr17:72186455-72186535 24 2.37e-05 tcataagtta gtcacatg gtcacaaatg chr10:71754211-71754291 19 2.37e-05 cctgaactaa gtcacatg accacagcca chr1:18779233-18779313 15 2.37e-05 gctagaacta gtcacatg acccccacat chr20:21077065-21077145 23 2.37e-05 cgaatgttta gtcacatg gtcctcgtgt chr1:20767420-20767500 25 2.37e-05 ctggacccca gtcacatg gtcagactgg chr3:49435015-49435095 6 2.37e-05 tcata gtcacatg gctgccagtt chr1:31327139-31327219 20 2.37e-05 ggccacgtta gtcacatg gccccacctg chr4:7075467-7075547 25 2.37e-05 gcaaaatgtg gtcacatg ccacacctgg chr16:87009103-87009183 54 5.67e-05 agctgggtgt gtcatgtg attggattct chr1:15288464-15288544 19 5.67e-05 caagagcttg gtcatgtg accattccta chr12:117330310-11733039 17 5.67e-05 tcagaactta gtcatgtg gcctcgccta chr16:9147098-9147178 26 5.67e-05 cccaaatcca gtcacgtg cccaccctca chr2:36845634-36845714 46 5.67e-05 gctccatgtg gtcacgtg aatgagttct chr17:17653424-17653504 21 5.67e-05 ctggagcaca gtcatgtg accatgccca chr16:33569517-33569597 24 5.67e-05 ccaaaatgtg gtcacgtg gccatgcttt chr4:79575004-79575084 21 5.67e-05 acagagatta gtcacgtg gccacagtta chr5:153211671-153211751 55 8.93e-05 cttagatgtg gccacatg actgagttta chr4:6374781-6374861 52 8.93e-05 cccagacatg gccacatg actagttctg chr16:74729859-74729939 47 1.35e-04 acttgatgtg gccatgtg actagttctc chr11:69614406-69614486 48 1.35e-04 gcttggagtg gccatgtg actgaaggct chr3:129409349-129409429 48 1.35e-04 cctttgcaag gccatgtg actagttctg chr9:133003011-133003091 50 1.35e-04 gctgagtgcg gccatgtg acccagttct chr9:37920529-37920609 56 1.35e-04 caggcagtta gccatgtg acttggctta chr1:22755253-22755333 56 1.35e-04 tgcaggtgtt gccatgtg actgagttct chr7:1465352-1465432 56 1.35e-04 gcctgccctg gccatgtg actatattct chr6:14800259-14800339 53 1.35e-04 gcttggtgtg gccatgtg atcaagttat chr20:49084689-49084769 51 1.35e-04 gcaagaagcg gccatgtg actgaggtat chr12:124594397-12459447 50 1.52e-04 cctaggggtg atcacatg gcacagctct chr12:121488698-12148877 11 1.52e-04 tcagaactta atcacatg gtcacaccca chr10:72288704-72288784 23 1.76e-04 cagaacttaa atcatgtg accacaatga chr19:50501072-50501152 45 1.99e-04 gtgaggactg accacatg accaagttct chr19:49851181-49851261 43 1.99e-04 gttaggtgtg accacatg actaagttct chr3:14361227-14361307 57 2.32e-04 gtgaggtagg accatgtg atttagttcc chr9:132346478-132346558 52 2.32e-04 gctagatgtg accatgtg atcaagttct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:21226449-21226529 2.4e-05 14_[+5]_58 chr1:35177274-35177354 2.4e-05 19_[+5]_53 chr11:69444969-69445049 2.4e-05 28_[+5]_44 chr21:35434463-35434543 2.4e-05 26_[+5]_46 chr21:35402526-35402606 2.4e-05 9_[+5]_63 chr2:10552681-10552761 2.4e-05 25_[+5]_47 chr17:72186455-72186535 2.4e-05 23_[+5]_49 chr10:71754211-71754291 2.4e-05 18_[+5]_54 chr1:18779233-18779313 2.4e-05 14_[+5]_58 chr20:21077065-21077145 2.4e-05 22_[+5]_50 chr1:20767420-20767500 2.4e-05 24_[+5]_48 chr3:49435015-49435095 2.4e-05 5_[+5]_67 chr1:31327139-31327219 2.4e-05 19_[+5]_53 chr4:7075467-7075547 2.4e-05 24_[+5]_48 chr16:87009103-87009183 5.7e-05 53_[+5]_19 chr1:15288464-15288544 5.7e-05 18_[+5]_54 chr12:117330310-11733039 5.7e-05 16_[+5]_56 chr16:9147098-9147178 5.7e-05 25_[+5]_47 chr2:36845634-36845714 5.7e-05 45_[+5]_27 chr17:17653424-17653504 5.7e-05 20_[+5]_52 chr16:33569517-33569597 5.7e-05 23_[+5]_49 chr4:79575004-79575084 5.7e-05 20_[+5]_52 chr5:153211671-153211751 8.9e-05 54_[+5]_18 chr4:6374781-6374861 8.9e-05 51_[+5]_21 chr16:74729859-74729939 0.00013 46_[+5]_26 chr11:69614406-69614486 0.00013 47_[+5]_25 chr3:129409349-129409429 0.00013 47_[+5]_25 chr9:133003011-133003091 0.00013 49_[+5]_23 chr9:37920529-37920609 0.00013 55_[+5]_17 chr1:22755253-22755333 0.00013 55_[+5]_17 chr7:1465352-1465432 0.00013 55_[+5]_17 chr6:14800259-14800339 0.00013 52_[+5]_20 chr20:49084689-49084769 0.00013 50_[+5]_22 chr12:124594397-12459447 0.00015 49_[+5]_23 chr12:121488698-12148877 0.00015 10_[+5]_62 chr10:72288704-72288784 0.00018 22_[+5]_50 chr19:50501072-50501152 0.0002 44_[+5]_28 chr19:49851181-49851261 0.0002 42_[+5]_30 chr3:14361227-14361307 0.00023 56_[+5]_16 chr9:132346478-132346558 0.00023 51_[+5]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GYCAYRTG width=8 seqs=40 chr17:21226449-21226529 ( 15) GTCACATG 1 chr1:35177274-35177354 ( 20) GTCACATG 1 chr11:69444969-69445049 ( 29) GTCACATG 1 chr21:35434463-35434543 ( 27) GTCACATG 1 chr21:35402526-35402606 ( 10) GTCATATG 1 chr2:10552681-10552761 ( 26) GTCACATG 1 chr17:72186455-72186535 ( 24) GTCACATG 1 chr10:71754211-71754291 ( 19) GTCACATG 1 chr1:18779233-18779313 ( 15) GTCACATG 1 chr20:21077065-21077145 ( 23) GTCACATG 1 chr1:20767420-20767500 ( 25) GTCACATG 1 chr3:49435015-49435095 ( 6) GTCACATG 1 chr1:31327139-31327219 ( 20) GTCACATG 1 chr4:7075467-7075547 ( 25) GTCACATG 1 chr16:87009103-87009183 ( 54) GTCATGTG 1 chr1:15288464-15288544 ( 19) GTCATGTG 1 chr12:117330310-11733039 ( 17) GTCATGTG 1 chr16:9147098-9147178 ( 26) GTCACGTG 1 chr2:36845634-36845714 ( 46) GTCACGTG 1 chr17:17653424-17653504 ( 21) GTCATGTG 1 chr16:33569517-33569597 ( 24) GTCACGTG 1 chr4:79575004-79575084 ( 21) GTCACGTG 1 chr5:153211671-153211751 ( 55) GCCACATG 1 chr4:6374781-6374861 ( 52) GCCACATG 1 chr16:74729859-74729939 ( 47) GCCATGTG 1 chr11:69614406-69614486 ( 48) GCCATGTG 1 chr3:129409349-129409429 ( 48) GCCATGTG 1 chr9:133003011-133003091 ( 50) GCCATGTG 1 chr9:37920529-37920609 ( 56) GCCATGTG 1 chr1:22755253-22755333 ( 56) GCCATGTG 1 chr7:1465352-1465432 ( 56) GCCATGTG 1 chr6:14800259-14800339 ( 53) GCCATGTG 1 chr20:49084689-49084769 ( 51) GCCATGTG 1 chr12:124594397-12459447 ( 50) ATCACATG 1 chr12:121488698-12148877 ( 11) ATCACATG 1 chr10:72288704-72288784 ( 23) ATCATGTG 1 chr19:50501072-50501152 ( 45) ACCACATG 1 chr19:49851181-49851261 ( 43) ACCACATG 1 chr3:14361227-14361307 ( 57) ACCATGTG 1 chr9:132346478-132346558 ( 52) ACCATGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.08256 E= 7.4e-011 -26 -1197 150 -1197 -1197 38 -1197 157 -1197 179 -1197 -1197 225 -1197 -1197 -1197 -1197 99 -1197 102 125 -1197 78 -1197 -1197 -1197 -1197 225 -1197 -1197 178 -1197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 40 E= 7.4e-011 0.175000 0.000000 0.825000 0.000000 0.000000 0.375000 0.000000 0.625000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.575000 0.000000 0.425000 0.500000 0.000000 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYCAYRTG MEME-5 regular expression -------------------------------------------------------------------------------- G[TC]CA[CT][AG]TG -------------------------------------------------------------------------------- Time 16.86 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:49416530-49416610 5.04e-03 64_[+2(1.92e-05)]_8 chr19:49362005-49362085 2.03e-04 3_[+4(1.71e-05)]_58_[+2(6.60e-05)]_\ 3 chr19:49310030-49310110 1.34e-03 5_[+3(8.85e-05)]_50_[+2(3.30e-05)]_\ 9 chr19:55831279-55831359 9.23e-04 6_[+3(5.14e-05)]_51_[+2(1.92e-05)]_\ 7 chr19:54396427-54396507 5.65e-05 7_[+3(5.14e-05)]_51_[+2(6.60e-05)]_\ 6 chr19:54682369-54682449 1.94e-05 [+3(8.85e-05)]_51_[+2(1.92e-05)]_2_\ [+1(9.99e-06)]_3 chr19:46027147-46027227 1.80e-05 17_[+4(7.16e-06)]_1_[+3(5.14e-05)]_\ 46 chr19:54480865-54480945 6.34e-05 6_[+3(8.85e-05)]_66 chr19:54411492-54411572 4.22e-03 60_[+2(6.60e-05)]_12 chr19:55709057-55709137 1.98e-04 1_[+3(8.85e-05)]_52_[+2(6.60e-05)]_\ 11 chr6:31866310-31866390 2.51e-04 24_[+2(3.30e-05)]_2_[+1(9.99e-06)]_\ 24_[+2(3.30e-05)]_6 chr2:27319261-27319341 9.68e-03 11_[+2(3.30e-05)]_26_[+2(3.30e-05)]_\ 27 chr19:49486859-49486939 2.57e-04 58_[+2(3.30e-05)]_2_[+1(9.99e-06)]_\ 4 chr19:55816998-55817078 5.26e-05 4_[+3(1.88e-05)]_58_[+1(5.54e-05)]_\ 2 chr19:48922671-48922751 2.19e-06 1_[+4(2.43e-05)]_1_[+3(1.88e-05)]_\ 62 chr19:49013930-49014010 4.26e-04 3_[+4(1.71e-05)]_69 chr19:51142565-51142645 2.04e-02 59_[+2(1.92e-05)]_13 chr19:49228264-49228344 7.97e-03 52_[+2(3.30e-05)]_20 chr17:7118413-7118493 2.88e-03 66_[+2(7.61e-05)]_6 chr19:49248613-49248693 1.27e-03 62_[+2(3.30e-05)]_2_[+1(5.54e-05)] chr19:49385146-49385226 1.95e-04 60_[+2(6.60e-05)]_2_[+1(9.99e-06)]_\ 2 chr11:46134679-46134759 2.03e-05 15_[+3(1.88e-05)]_29_[+4(4.41e-05)]_\ 20 chr6:52929630-52929710 1.53e-01 80 chr19:54382689-54382769 4.79e-02 80 chr19:55690517-55690597 1.33e-02 55_[+2(1.92e-05)]_17 chr6:10147347-10147427 2.21e-04 4_[+3(5.14e-05)]_18_[+4(9.13e-05)]_\ 1_[+3(5.14e-05)]_33 chr9:72435534-72435614 4.33e-06 2_[+3(5.14e-05)]_[+1(3.10e-05)]_43_\ [+2(3.30e-05)]_2_[+1(5.54e-05)]_1 chr1:154979439-154979519 2.48e-04 10_[+4(1.71e-05)]_62 chr17:40559677-40559757 6.41e-07 6_[+4(5.40e-05)]_1_[+3(1.88e-05)]_\ 25_[+2(1.92e-05)]_24 chr19:38270214-38270294 7.49e-03 38_[+1(5.54e-05)]_34 chr19:507895-507975 2.49e-02 54_[+2(1.92e-05)]_18 chr4:104020997-104021077 1.23e-03 39_[+2(1.92e-05)]_2_[+1(5.54e-05)]_\ 23 chr14:36295376-36295456 1.98e-03 53_[+4(7.16e-06)]_19 chr19:55815807-55815887 6.33e-03 61_[+2(6.60e-05)]_11 chr2:39005284-39005364 1.61e-02 1_[+4(1.71e-05)]_71 chr19:55677446-55677526 5.02e-03 64_[+2(3.30e-05)]_8 chr13:52157976-52158056 6.73e-04 9_[+4(7.76e-05)]_1_[+3(5.14e-05)]_\ 54 chr1:10706565-10706645 1.27e-03 71_[+2(1.92e-05)]_1 chr19:50651538-50651618 1.24e-06 3_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 51_[+2(1.92e-05)]_1 chr1:147142662-147142742 1.29e-04 54_[+4(7.16e-06)]_18 chr17:7358821-7358901 9.06e-04 3_[+3(5.14e-05)]_69 chr19:49017223-49017303 1.74e-02 22_[+2(7.61e-05)]_50 chr20:48732488-48732568 2.03e-02 54_[+2(6.60e-05)]_18 chr8:124054111-124054191 1.91e-02 80 chr19:48907013-48907093 4.00e-03 13_[+2(1.92e-05)]_59 chrX:149736803-149736883 2.00e-05 22_[+4(7.16e-06)]_41_[+3(1.88e-05)]_\ 1 chr19:47942198-47942278 1.04e-03 30_[+4(2.43e-05)]_42 chr13:31736502-31736582 7.02e-03 33_[+2(1.92e-05)]_23_[+2(1.92e-05)]_\ 8 chr5:178157719-178157799 5.91e-04 60_[+1(9.99e-06)]_12 chr9:99616830-99616910 1.52e-04 37_[+4(3.42e-05)]_1_[+3(8.85e-05)]_\ 26 chr19:49422141-49422221 1.35e-06 2_[+4(7.16e-06)]_1_[+3(6.50e-05)]_\ 20_[+3(5.14e-05)]_21_[+2(1.92e-05)]_4 chr6:6890960-6891040 1.23e-03 57_[+1(9.99e-06)]_15 chr1:234812098-234812178 6.81e-03 55_[+1(9.99e-06)]_17 chr2:23598478-23598558 6.65e-05 27_[+2(1.92e-05)]_45 chr5:138775204-138775284 1.04e-04 53_[+4(1.71e-05)]_19 chr3:69788441-69788521 3.43e-03 23_[+2(3.30e-05)]_2_[+1(5.54e-05)]_\ 39 chrX:70315607-70315687 3.93e-02 80 chr10:72288704-72288784 4.35e-04 80 chr22:41840465-41840545 1.97e-03 80 chr6:44101522-44101602 2.98e-02 80 chr20:49084689-49084769 2.05e-05 14_[+4(3.42e-05)]_58 chr19:44331374-44331454 6.77e-05 35_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 28 chr6:14800259-14800339 2.21e-05 16_[+4(3.42e-05)]_56 chr17:7094948-7095028 3.73e-04 53_[+2(1.92e-05)]_19 chr1:224544447-224544527 3.03e-03 44_[+4(1.71e-05)]_28 chr1:47799895-47799975 1.52e-02 80 chr18:56806959-56807039 6.06e-02 13_[+2(3.30e-05)]_59 chr4:7075467-7075547 4.81e-06 24_[+5(2.37e-05)]_20_[+2(1.92e-05)]_\ 2_[+1(5.54e-05)]_10 chr22:33300162-33300242 1.30e-06 13_[+4(3.42e-05)]_1_[+3(1.88e-05)]_\ 50 chr14:81408130-81408210 1.52e-04 70_[+4(4.41e-05)]_2 chr14:82000459-82000539 2.63e-06 9_[+4(1.71e-05)]_1_[+3(5.14e-05)]_\ 54 chr11:134123307-13412338 1.90e-05 [+2(3.30e-05)]_60_[+4(1.71e-05)]_4 chr19:49404475-49404555 2.22e-02 80 chr12:32832079-32832159 5.05e-06 10_[+4(7.16e-06)]_1_[+3(1.88e-05)]_\ 53 chr7:1465352-1465432 4.56e-05 19_[+4(2.43e-05)]_53 chr12:49449920-49450000 6.98e-04 33_[+2(1.92e-05)]_39 chr1:22755253-22755333 9.76e-07 23_[+4(3.42e-05)]_1_[+3(1.88e-05)]_\ 40 chr16:29687574-29687654 3.87e-03 64_[+1(5.54e-05)]_8 chr11:60681316-60681396 1.12e-03 39_[+4(2.43e-05)]_33 chr2:217277077-217277157 1.31e-04 11_[+4(7.16e-06)]_1_[+3(5.14e-05)]_\ 52 chr4:79575004-79575084 4.05e-04 20_[+5(5.67e-05)]_31_[+1(5.54e-05)]_\ 13 chr6:157801084-157801164 5.41e-02 27_[+1(5.54e-05)]_45 chr7:20257087-20257167 2.14e-01 17_[+4(9.85e-05)]_17_[+4(7.76e-05)]_\ 30 chr9:101172668-101172748 8.42e-06 22_[+4(2.43e-05)]_1_[+3(5.14e-05)]_\ 41 chr5:178286889-178286969 8.51e-04 7_[+4(5.40e-05)]_1_[+3(5.14e-05)]_\ 56 chr16:46918121-46918201 1.79e-02 29_[+1(9.99e-06)]_43 chr6:43215023-43215103 1.16e-03 57_[+2(1.92e-05)]_15 chr16:33569517-33569597 2.16e-05 23_[+5(5.67e-05)]_21_[+2(1.92e-05)]_\ 20 chr11:64387367-64387447 6.93e-04 38_[+2(6.60e-05)]_2_[+1(9.99e-06)]_\ 24 chr19:7616377-7616457 2.94e-02 1_[+2(1.92e-05)]_23_[+2(1.92e-05)]_\ 40 chr9:37920529-37920609 2.05e-05 21_[+4(3.42e-05)]_51 chr14:59655245-59655325 3.17e-02 50_[+3(5.14e-05)]_22 chr10:38383162-38383242 4.26e-02 80 chr19:49250488-49250568 1.49e-04 [+4(1.71e-05)]_72 chr4:185265099-185265179 3.22e-04 59_[+2(3.30e-05)]_2_[+1(5.54e-05)]_\ 3 chr19:55708325-55708405 1.27e-04 1_[+4(7.16e-06)]_1_[+3(8.85e-05)]_\ 62 chr5:55008169-55008249 1.61e-02 71_[+4(1.71e-05)]_1 chr6:15245626-15245706 4.64e-04 57_[+1(9.99e-06)]_15 chr9:132346478-132346558 1.15e-06 15_[+4(2.43e-05)]_1_[+3(1.88e-05)]_\ 48 chr13:30881217-30881297 8.13e-05 54_[+4(7.16e-06)]_1_[+3(8.85e-05)]_\ 9 chr2:202316292-202316372 1.17e-04 53_[+2(1.92e-05)]_2_[+1(5.54e-05)]_\ 9 chr20:23402134-23402214 1.02e-01 80 chr19:57946556-57946636 2.19e-03 38_[+4(2.43e-05)]_34 chr22:29168600-29168680 3.95e-03 16_[+4(6.77e-05)]_56 chr2:136288406-136288486 3.14e-02 80 chr19:38397749-38397829 2.29e-01 80 chr11:74109856-74109936 3.49e-06 12_[+1(9.99e-06)]_45_[+3(1.88e-05)]_\ 7 chr16:31045654-31045734 1.20e-02 46_[+1(9.99e-06)]_26 chr9:133003011-133003091 2.05e-05 13_[+4(3.42e-05)]_59 chr17:7591572-7591652 1.22e-06 24_[+4(1.71e-05)]_1_[+3(1.88e-05)]_\ 21_[+2(6.60e-05)]_10 chr2:38892992-38893072 3.50e-03 80 chr4:8160670-8160750 1.40e-03 45_[+4(1.71e-05)]_1_[+3(1.88e-05)]_\ 18 chr8:82755015-82755095 2.09e-06 10_[+4(1.71e-05)]_1_[+3(5.14e-05)]_\ 53 chr12:110151312-11015139 2.56e-01 80 chr18:9913573-9913653 1.23e-02 [+3(1.88e-05)]_72 chr1:31327139-31327219 8.27e-04 19_[+5(2.37e-05)]_53 chr19:44488242-44488322 4.44e-02 63_[+2(3.30e-05)]_9 chr2:74753493-74753573 8.36e-04 38_[+2(1.92e-05)]_2_[+1(5.54e-05)]_\ 24 chr3:49435015-49435095 4.09e-07 5_[+5(2.37e-05)]_15_[+4(3.42e-05)]_\ 1_[+3(1.88e-05)]_35 chr1:20767420-20767500 6.04e-06 24_[+5(2.37e-05)]_48 chr11:107436435-10743651 1.52e-04 36_[+3(8.85e-05)]_36 chr2:86332681-86332761 5.55e-04 10_[+3(1.88e-05)]_52_[+2(3.30e-05)]_\ 2 chr1:205744602-205744682 4.23e-04 71_[+2(6.60e-05)]_1 chr20:21077065-21077145 1.64e-05 22_[+5(2.37e-05)]_32_[+1(9.99e-06)]_\ 10 chr12:861514-861594 1.10e-03 7_[+4(7.16e-06)]_65 chr17:38443831-38443911 6.55e-02 80 chr3:98241872-98241952 2.42e-01 80 chrX:106045769-106045849 1.63e-05 62_[+4(7.16e-06)]_10 chr11:64456049-64456129 1.52e-05 34_[+4(7.16e-06)]_1_[+3(1.88e-05)]_\ 29 chr2:54950536-54950616 3.03e-05 6_[+2(6.60e-05)]_46_[+4(9.13e-05)]_\ 1_[+3(5.14e-05)]_3 chrX:134478623-134478703 1.72e-02 80 chr9:15422715-15422795 9.36e-03 32_[+1(5.54e-05)]_40 chr9:97021496-97021576 3.12e-02 62_[+1(9.99e-06)]_10 chr3:141365812-141365892 1.07e-02 33_[+1(5.54e-05)]_39 chr17:40075332-40075412 5.41e-03 53_[+2(1.92e-05)]_19 chr19:49224361-49224441 3.08e-03 67_[+1(9.99e-06)]_5 chr1:18779233-18779313 4.66e-05 14_[+5(2.37e-05)]_10_[+4(6.77e-05)]_\ 40 chr7:150689942-150690022 1.03e-05 6_[+4(7.16e-06)]_58_[+2(3.30e-05)] chr10:71754211-71754291 6.53e-05 18_[+5(2.37e-05)]_54 chr11:73661981-73662061 3.58e-04 19_[+4(1.71e-05)]_53 chr5:74807639-74807719 1.71e-02 29_[+2(3.30e-05)]_28_[+2(6.60e-05)]_\ 7 chr17:72186455-72186535 2.27e-07 23_[+5(2.37e-05)]_9_[+4(6.77e-05)]_\ 4_[+2(1.92e-05)]_2_[+1(5.54e-05)]_10 chr17:4634603-4634683 1.75e-03 16_[+1(9.99e-06)]_36_[+2(6.60e-05)]_\ 12 chr15:75182310-75182390 6.95e-05 14_[+4(2.43e-05)]_58 chr20:986451-986531 6.42e-04 80 chr13:33112985-33113065 2.15e-02 59_[+3(5.14e-05)]_13 chr4:18023794-18023874 1.56e-01 80 chr16:68482612-68482692 6.41e-03 8_[+1(1.72e-05)]_51_[+1(8.57e-05)]_\ 5 chr11:65635655-65635735 9.86e-03 3_[+3(6.50e-05)]_69 chr19:48848302-48848382 1.90e-04 23_[+4(1.71e-05)]_1_[+3(1.88e-05)]_\ 40 chr3:129409349-129409429 5.99e-05 19_[+4(3.42e-05)]_53 chr19:44809191-44809271 1.27e-03 14_[+3(5.14e-05)]_47_[+3(5.14e-05)]_\ 3 chr11:69614406-69614486 1.68e-05 11_[+4(2.43e-05)]_61 chr12:56710133-56710213 2.87e-06 3_[+4(2.43e-05)]_1_[+3(5.14e-05)]_\ 32_[+4(7.16e-06)]_11_[+2(6.60e-05)]_1 chr1:156052280-156052360 2.31e-02 55_[+1(5.54e-05)]_17 chr19:48866434-48866514 2.62e-04 7_[+3(5.14e-05)]_50_[+2(1.92e-05)]_\ 7 chr19:41084568-41084648 7.67e-03 50_[+3(8.85e-05)]_22 chr4:6374781-6374861 2.35e-07 15_[+4(3.42e-05)]_1_[+3(1.88e-05)]_\ 19_[+5(8.93e-05)]_21 chr19:50836848-50836928 7.86e-02 80 chr10:73083348-73083428 2.53e-04 80 chr3:61235795-61235875 9.62e-03 18_[+3(5.14e-05)]_54 chr19:51152940-51153020 1.51e-05 8_[+3(8.85e-05)]_5_[+1(3.10e-05)]_\ 23_[+4(2.43e-05)]_1_[+3(8.85e-05)]_11 chr19:49851181-49851261 8.10e-06 6_[+4(2.43e-05)]_66 chr19:50501072-50501152 2.02e-03 80 chr1:243419228-243419308 1.82e-02 46_[+4(1.71e-05)]_26 chr19:19887287-19887367 2.33e-04 28_[+4(1.71e-05)]_1_[+3(1.88e-05)]_\ 35 chr2:220150937-220151017 5.86e-01 80 chr2:26296438-26296518 1.23e-02 27_[+1(5.54e-05)]_45 chr11:66035883-66035963 3.49e-04 2_[+4(7.16e-06)]_25_[+2(6.60e-05)]_\ 37 chr16:74729859-74729939 5.84e-05 10_[+4(2.43e-05)]_62 chr19:4304525-4304605 1.32e-03 31_[+4(2.43e-05)]_41 chr4:2538121-2538201 2.99e-01 80 chr17:40273371-40273451 6.64e-02 80 chr10:104262578-10426265 1.57e-01 80 chr10:92631647-92631727 2.95e-03 24_[+3(1.88e-05)]_48 chr12:133532880-13353296 1.14e-04 6_[+4(2.43e-05)]_24_[+4(5.40e-05)]_\ 34 chr19:2456998-2457078 2.02e-01 80 chr3:49466718-49466798 1.31e-03 39_[+4(7.16e-06)]_33 chr2:10552681-10552761 4.88e-06 25_[+5(2.37e-05)]_47 chr11:113644472-11364455 2.15e-04 66_[+3(1.88e-05)]_6 chr12:88535972-88536052 2.13e-05 28_[+1(3.10e-05)]_17_[+2(1.92e-05)]_\ 19 chr2:241525743-241525823 5.37e-03 26_[+2(1.92e-05)]_11_[+2(1.92e-05)]_\ 27 chr19:41571007-41571087 3.24e-03 7_[+4(2.43e-05)]_65 chr10:43048344-43048424 1.68e-04 62_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 1 chr2:2617283-2617363 1.35e-03 36_[+4(7.16e-06)]_36 chr4:56252366-56252446 1.42e-03 3_[+4(3.42e-05)]_69 chr14:24701763-24701843 3.65e-05 9_[+4(2.43e-05)]_63 chr18:71815680-71815760 1.55e-02 54_[+3(5.14e-05)]_18 chr20:20693558-20693638 1.49e-01 80 chr17:17653424-17653504 8.79e-05 20_[+5(5.67e-05)]_52 chr21:35402526-35402606 5.58e-05 9_[+5(2.37e-05)]_31_[+1(5.54e-05)]_\ 24 chr17:19912564-19912644 1.08e-02 80 chr12:121488698-12148877 2.55e-04 80 chr16:58426726-58426806 9.84e-03 65_[+1(5.54e-05)]_7 chr16:57728647-57728727 2.53e-05 15_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 8_[+3(5.14e-05)]_32 chr3:183735751-183735831 3.95e-05 56_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 7 chr3:14361227-14361307 3.42e-05 20_[+4(3.42e-05)]_52 chr19:50030969-50031049 8.67e-04 80 chr6:110501301-110501381 1.51e-04 5_[+4(5.40e-05)]_67 chr19:14743226-14743306 1.34e-05 25_[+4(3.42e-05)]_47 chr3:167452749-167452829 5.82e-03 40_[+4(9.13e-05)]_32 chr4:174291896-174291976 1.96e-01 80 chr12:57623373-57623453 4.39e-04 8_[+4(7.16e-06)]_64 chr13:26827955-26828035 1.02e-01 80 chr5:131526031-131526111 5.72e-04 2_[+4(2.43e-05)]_70 chr15:41099689-41099769 5.29e-02 80 chr19:45988706-45988786 1.66e-04 7_[+4(7.16e-06)]_1_[+3(1.88e-05)]_\ 56 chr15:40986899-40986979 3.17e-02 80 chr2:36845634-36845714 1.28e-05 9_[+4(3.42e-05)]_28_[+5(5.67e-05)]_\ 27 chr19:10828064-10828144 5.22e-04 47_[+1(5.54e-05)]_25 chr19:1095514-1095594 7.63e-02 63_[+1(5.54e-05)]_9 chr10:44144321-44144401 2.00e-04 2_[+4(1.71e-05)]_1_[+3(5.14e-05)]_\ 61 chr19:48832876-48832956 1.08e-04 45_[+2(1.92e-05)]_2_[+1(5.54e-05)]_\ 17 chr1:17338465-17338545 1.51e-02 80 chr1:154842888-154842968 3.44e-03 58_[+1(5.54e-05)]_14 chr12:119667749-11966782 1.34e-05 21_[+4(3.42e-05)]_51 chr7:152887686-152887766 5.81e-04 14_[+4(3.42e-05)]_1_[+3(5.14e-05)]_\ 49 chr16:9147098-9147178 3.19e-05 25_[+5(5.67e-05)]_21_[+2(1.92e-05)]_\ 18 chr2:18741923-18742003 5.06e-03 48_[+2(1.92e-05)]_2_[+1(5.54e-05)]_\ 14 chr16:30908468-30908548 1.17e-03 4_[+4(3.42e-05)]_68 chr3:4344940-4345020 3.89e-06 10_[+4(7.16e-06)]_1_[+3(8.85e-05)]_\ 25_[+3(1.88e-05)]_20 chr10:103892659-10389273 5.29e-02 80 chr12:117330310-11733039 4.97e-05 16_[+5(5.67e-05)]_21_[+2(1.92e-05)]_\ 27 chr19:37569234-37569314 5.04e-04 6_[+4(3.42e-05)]_29_[+4(3.42e-05)]_\ 29 chr3:50388504-50388584 3.12e-05 3_[+4(7.16e-06)]_69 chr11:125773098-12577317 2.15e-02 80 chr19:49148190-49148270 5.81e-05 1_[+3(1.88e-05)]_60_[+1(9.99e-06)]_\ 3 chr1:15288464-15288544 5.49e-05 18_[+5(5.67e-05)]_21_[+2(3.30e-05)]_\ 2_[+1(5.54e-05)]_15 chr16:81779949-81780029 1.23e-04 [+3(5.14e-05)]_50_[+2(3.30e-05)]_14 chr21:35434463-35434543 4.64e-04 26_[+5(2.37e-05)]_46 chr11:69444969-69445049 7.32e-06 28_[+5(2.37e-05)]_21_[+2(1.92e-05)]_\ 15 chr5:153211671-153211751 1.55e-06 24_[+4(3.42e-05)]_1_[+3(1.88e-05)]_\ 13_[+5(8.93e-05)]_18 chr16:58664407-58664487 5.00e-02 80 chr12:124594397-12459447 3.52e-05 13_[+4(2.43e-05)]_59 chr3:13933313-13933393 1.84e-04 13_[+4(2.43e-05)]_1_[+3(1.88e-05)]_\ 50 chr4:185585799-185585879 3.95e-03 80 chr19:1021271-1021351 4.80e-01 80 chr15:52121768-52121848 6.39e-05 26_[+4(7.16e-06)]_1_[+3(5.14e-05)]_\ 37 chr19:4066019-4066099 2.02e-03 80 chr1:35177274-35177354 8.28e-07 19_[+5(2.37e-05)]_21_[+2(1.92e-05)]_\ 2_[+1(9.99e-06)]_14 chr6:41703397-41703477 4.32e-02 80 chr1:156308548-156308628 6.28e-03 80 chr4:6585013-6585093 9.05e-03 40_[+5(5.67e-05)]_32 chr16:87009103-87009183 3.09e-05 18_[+4(2.43e-05)]_27_[+5(5.67e-05)]_\ 19 chr10:126490305-12649038 5.20e-03 11_[+3(8.85e-05)]_61 chr19:49947073-49947153 1.50e-03 64_[+1(9.99e-06)]_8 chr19:56915619-56915699 1.13e-02 15_[+3(1.88e-05)]_57 chr11:66138868-66138948 2.06e-05 13_[+4(1.71e-05)]_38_[+2(6.60e-05)]_\ 2_[+1(9.99e-06)]_3 chr1:155990742-155990822 4.68e-03 57_[+1(9.99e-06)]_15 chr17:21226449-21226529 1.08e-03 14_[+5(2.37e-05)]_58 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n09.farnam.hpc.yale.internal ********************************************************************************