******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZMIZ1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr11:12561981-12562061 1.0000 80 chr12:124972480-12497256 1.0000 80 chr21:16437274-16437354 1.0000 80 chr10:64603512-64603592 1.0000 80 chr5:65104810-65104890 1.0000 80 chr7:5607605-5607685 1.0000 80 chr19:16847692-16847772 1.0000 80 chr2:191395234-191395314 1.0000 80 chr22:36841506-36841586 1.0000 80 chr1:169083257-169083337 1.0000 80 chr8:134340275-134340355 1.0000 80 chr12:110233017-11023309 1.0000 80 chr22:36475208-36475288 1.0000 80 chr12:113748452-11374853 1.0000 80 chr15:67247639-67247719 1.0000 80 chr2:168799378-168799458 1.0000 80 chr11:64765783-64765863 1.0000 80 chr9:5630340-5630420 1.0000 80 chr9:126400648-126400728 1.0000 80 chr20:35028174-35028254 1.0000 80 chr16:86701900-86701980 1.0000 80 chr9:132181926-132182006 1.0000 80 chr20:34064271-34064351 1.0000 80 chr11:12009073-12009153 1.0000 80 chr14:91848566-91848646 1.0000 80 chr6:157117108-157117188 1.0000 80 chr16:9531102-9531182 1.0000 80 chr19:5358358-5358438 1.0000 80 chr14:89592963-89593043 1.0000 80 chr4:71587493-71587573 1.0000 80 chr19:17015597-17015677 1.0000 80 chr19:50170914-50170994 1.0000 80 chr16:81588006-81588086 1.0000 80 chr2:220246324-220246404 1.0000 80 chr8:144535149-144535229 1.0000 80 chr15:68285406-68285486 1.0000 80 chr5:170904283-170904363 1.0000 80 chr10:73104800-73104880 1.0000 80 chr20:55753921-55754001 1.0000 80 chr17:81023831-81023911 1.0000 80 chr19:8991684-8991764 1.0000 80 chr5:89829763-89829843 1.0000 80 chr15:68974880-68974960 1.0000 80 chr1:38706441-38706521 1.0000 80 chr20:4042752-4042832 1.0000 80 chr7:44788319-44788399 1.0000 80 chr19:54448872-54448952 1.0000 80 chr10:71567643-71567723 1.0000 80 chr17:41869118-41869198 1.0000 80 chr20:33103361-33103441 1.0000 80 chr19:15537468-15537548 1.0000 80 chr18:20147931-20148011 1.0000 80 chr4:6988858-6988938 1.0000 80 chr16:21732031-21732111 1.0000 80 chr19:965288-965368 1.0000 80 chrX:122293406-122293486 1.0000 80 chr8:27381849-27381929 1.0000 80 chr19:36313608-36313688 1.0000 80 chr9:133263479-133263559 1.0000 80 chr22:37521364-37521444 1.0000 80 chr22:37397203-37397283 1.0000 80 chr8:142366769-142366849 1.0000 80 chr10:50587773-50587853 1.0000 80 chr19:19328090-19328170 1.0000 80 chr9:116986259-116986339 1.0000 80 chr2:121544300-121544380 1.0000 80 chr10:14195856-14195936 1.0000 80 chr2:119542614-119542694 1.0000 80 chr10:115282392-11528247 1.0000 80 chr11:3203135-3203215 1.0000 80 chr17:27388274-27388354 1.0000 80 chr9:131945827-131945907 1.0000 80 chr9:95826868-95826948 1.0000 80 chr7:76896627-76896707 1.0000 80 chr19:48606788-48606868 1.0000 80 chr8:124429369-124429449 1.0000 80 chr3:141747468-141747548 1.0000 80 chr19:6141399-6141479 1.0000 80 chr2:196379288-196379368 1.0000 80 chr9:133333553-133333633 1.0000 80 chr11:44799923-44800003 1.0000 80 chr4:4208083-4208163 1.0000 80 chr10:73010758-73010838 1.0000 80 chr22:46516103-46516183 1.0000 80 chr20:45670300-45670380 1.0000 80 chr12:56401110-56401190 1.0000 80 chr19:17660025-17660105 1.0000 80 chr19:55687605-55687685 1.0000 80 chr10:29044083-29044163 1.0000 80 chr14:21517729-21517809 1.0000 80 chr15:63413886-63413966 1.0000 80 chr9:135026657-135026737 1.0000 80 chr10:63584920-63585000 1.0000 80 chr1:54485667-54485747 1.0000 80 chr18:72922712-72922792 1.0000 80 chr15:31195992-31196072 1.0000 80 chr1:237108455-237108535 1.0000 80 chr19:45175697-45175777 1.0000 80 chr19:16427590-16427670 1.0000 80 chr16:27930219-27930299 1.0000 80 chr7:4946448-4946528 1.0000 80 chr9:136890492-136890572 1.0000 80 chr3:52095708-52095788 1.0000 80 chr11:45939729-45939809 1.0000 80 chr2:70758720-70758800 1.0000 80 chr11:919191-919271 1.0000 80 chr11:118401845-11840192 1.0000 80 chr1:233293153-233293233 1.0000 80 chr12:109362123-10936220 1.0000 80 chr1:46972412-46972492 1.0000 80 chr1:178062785-178062865 1.0000 80 chr11:65676913-65676993 1.0000 80 chr19:13228941-13229021 1.0000 80 chr19:17647911-17647991 1.0000 80 chr16:12253695-12253775 1.0000 80 chr1:162602720-162602800 1.0000 80 chr4:74318986-74319066 1.0000 80 chr19:47509250-47509330 1.0000 80 chr16:12897780-12897860 1.0000 80 chr16:87841854-87841934 1.0000 80 chr17:58213096-58213176 1.0000 80 chr12:25403877-25403957 1.0000 80 chr6:139736688-139736768 1.0000 80 chr17:62340750-62340830 1.0000 80 chr16:27214777-27214857 1.0000 80 chr19:761788-761868 1.0000 80 chr1:24658927-24659007 1.0000 80 chr9:113091193-113091273 1.0000 80 chr14:66974561-66974641 1.0000 80 chr16:88371913-88371993 1.0000 80 chr3:138313108-138313188 1.0000 80 chr17:42700870-42700950 1.0000 80 chr5:173104415-173104495 1.0000 80 chr20:562240-562320 1.0000 80 chr9:133373801-133373881 1.0000 80 chr5:53813434-53813514 1.0000 80 chr19:1935674-1935754 1.0000 80 chr8:18712497-18712577 1.0000 80 chr9:128239122-128239202 1.0000 80 chr7:92412308-92412388 1.0000 80 chr1:23219923-23220003 1.0000 80 chr17:34979889-34979969 1.0000 80 chr22:35653390-35653470 1.0000 80 chr12:117080651-11708073 1.0000 80 chr9:133295081-133295161 1.0000 80 chr2:209130810-209130890 1.0000 80 chr12:69724960-69725040 1.0000 80 chr9:133053277-133053357 1.0000 80 chr19:33071988-33072068 1.0000 80 chr5:34530920-34531000 1.0000 80 chr19:31841731-31841811 1.0000 80 chr1:154767257-154767337 1.0000 80 chr11:10737778-10737858 1.0000 80 chr14:69618474-69618554 1.0000 80 chr9:100967172-100967252 1.0000 80 chr6:37321777-37321857 1.0000 80 chr19:8139591-8139671 1.0000 80 chr2:97222807-97222887 1.0000 80 chr19:15543587-15543667 1.0000 80 chr17:34842360-34842440 1.0000 80 chr22:31365383-31365463 1.0000 80 chr15:100023339-10002341 1.0000 80 chr1:10448277-10448357 1.0000 80 chr3:69193036-69193116 1.0000 80 chr1:48109991-48110071 1.0000 80 chr16:56228369-56228449 1.0000 80 chr3:39149094-39149174 1.0000 80 chr1:114620972-114621052 1.0000 80 chr3:10803945-10804025 1.0000 80 chr16:54964413-54964493 1.0000 80 chr1:53480519-53480599 1.0000 80 chr20:22454132-22454212 1.0000 80 chr5:171986056-171986136 1.0000 80 chr17:80376459-80376539 1.0000 80 chr7:129076321-129076401 1.0000 80 chr2:86431760-86431840 1.0000 80 chrX:54466730-54466810 1.0000 80 chr10:17755358-17755438 1.0000 80 chr7:40098389-40098469 1.0000 80 chrX:48455825-48455905 1.0000 80 chr22:23857597-23857677 1.0000 80 chr17:42588831-42588911 1.0000 80 chr9:139839133-139839213 1.0000 80 chr12:133136423-13313650 1.0000 80 chr6:20689107-20689187 1.0000 80 chr12:114197112-11419719 1.0000 80 chr11:67236796-67236876 1.0000 80 chr11:69055580-69055660 1.0000 80 chr12:118810821-11881090 1.0000 80 chr19:52218252-52218332 1.0000 80 chr6:138026623-138026703 1.0000 80 chr17:1933354-1933434 1.0000 80 chr3:64902854-64902934 1.0000 80 chr9:119196758-119196838 1.0000 80 chr7:139477890-139477970 1.0000 80 chr10:131934604-13193468 1.0000 80 chr12:108155077-10815515 1.0000 80 chr15:45088802-45088882 1.0000 80 chr7:1015165-1015245 1.0000 80 chr16:84907896-84907976 1.0000 80 chr1:116820966-116821046 1.0000 80 chr11:32418095-32418175 1.0000 80 chr3:46457805-46457885 1.0000 80 chr9:36258454-36258534 1.0000 80 chr9:134378311-134378391 1.0000 80 chr12:109980010-10998009 1.0000 80 chr22:32870664-32870744 1.0000 80 chr1:12290000-12290080 1.0000 80 chr12:2113713-2113793 1.0000 80 chr3:5304341-5304421 1.0000 80 chr8:105601533-105601613 1.0000 80 chr1:91870360-91870440 1.0000 80 chr7:116594387-116594467 1.0000 80 chr20:37033935-37034015 1.0000 80 chr10:134385554-13438563 1.0000 80 chr20:36832149-36832229 1.0000 80 chr2:68353881-68353961 1.0000 80 chr17:36828659-36828739 1.0000 80 chr14:31889894-31889974 1.0000 80 chr2:203776375-203776455 1.0000 80 chr12:113338317-11333839 1.0000 80 chr11:46615615-46615695 1.0000 80 chr17:80606362-80606442 1.0000 80 chr1:27127092-27127172 1.0000 80 chr3:119384047-119384127 1.0000 80 chr2:44396826-44396906 1.0000 80 chr22:23419246-23419326 1.0000 80 chr1:183952950-183953030 1.0000 80 chr20:18118433-18118513 1.0000 80 chr2:121824279-121824359 1.0000 80 chr1:156721634-156721714 1.0000 80 chr6:42199920-42200000 1.0000 80 chr2:204103589-204103669 1.0000 80 chr18:44498112-44498192 1.0000 80 chr2:232794883-232794963 1.0000 80 chr1:222886566-222886646 1.0000 80 chr1:10534925-10535005 1.0000 80 chr16:2255422-2255502 1.0000 80 chr2:61244697-61244777 1.0000 80 chr16:68279068-68279148 1.0000 80 chr6:10430444-10430524 1.0000 80 chr8:30013821-30013901 1.0000 80 chr8:19202644-19202724 1.0000 80 chr19:8578590-8578670 1.0000 80 chr12:110140372-11014045 1.0000 80 chr7:132500633-132500713 1.0000 80 chr12:109726520-10972660 1.0000 80 chr12:125837774-12583785 1.0000 80 chr6:32098164-32098244 1.0000 80 chr11:102980012-10298009 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ZMIZ1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ZMIZ1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.233 C 0.264 G 0.271 T 0.233 Background letter frequencies (from file dataset with add-one prior applied): A 0.233 C 0.264 G 0.271 T 0.233 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ATGTCTGC MEME-1 width = 8 sites = 89 llr = 766 E-value = 2.5e-077 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 8::::::: pos.-specific C 2::3a::7 probability G ::9:::a1 matrix T :a17:a:2 bits 2.1 * 1.9 * ** 1.7 ** *** 1.5 ** *** Relative 1.3 ******* Entropy 1.1 ******* (12.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGTCTGC consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:42199920-42200000 43 1.51e-05 ttgattagtg atgtctgc cttagtcaca chr2:121824279-121824359 38 1.51e-05 ttgattagta atgtctgc cctggaagcg chr22:23419246-23419326 37 1.51e-05 tcgattagtg atgtctgc agcgggcacg chr2:68353881-68353961 36 1.51e-05 ttgattagtc atgtctgc aataaattag chr1:116820966-116821046 33 1.51e-05 ttgattagca atgtctgc caccggcaca chr16:84907896-84907976 72 1.51e-05 tagattagta atgtctgc c chr9:119196758-119196838 41 1.51e-05 TCTATTCGTA ATGTCTGC CATGGAGGCA chr17:1933354-1933434 48 1.51e-05 ATCGATCGCA ATGTCTGC GCTCTCCGCG chr11:69055580-69055660 38 1.51e-05 TCAATTAGTT ATGTCTGC CACGAGAACA chr2:97222807-97222887 42 1.51e-05 ttgattagta atgtctgc caaggccaca chr12:117080651-11708073 43 1.51e-05 ttgattagtg atgtctgc cacggtacag chr5:173104415-173104495 72 1.51e-05 tccattagtg atgtctgc c chr16:88371913-88371993 28 1.51e-05 TTGATTAGCA ATGTCTGC CCCGGCAAGA chr19:761788-761868 42 1.51e-05 tctgcttgtg atgtctgc catgggcatg chr16:87841854-87841934 51 1.51e-05 TCGATTGCTT ATGTCTGC CACTGGTGCA chr19:17647911-17647991 58 1.51e-05 tggattggtg atgtctgc cttgggcatg chr1:233293153-233293233 30 1.51e-05 TTGATTAGAA ATGTCTGC CACCAGCCCA chr10:63584920-63585000 44 1.51e-05 tctattagta atgtctgc cacagacatg chr19:17660025-17660105 72 1.51e-05 tcggttagca atgtctgc c chr4:4208083-4208163 51 1.51e-05 TTGATTGAGG ATGTCTGC TGTGGGACAG chr9:133333553-133333633 28 1.51e-05 TTGATTAGCA ATGTCTGC CATGAGTGCA chr19:48606788-48606868 61 1.51e-05 tcgattagtc atgtctgc cctgggcttg chr7:76896627-76896707 50 1.51e-05 ttgattggtg atgtctgc cccaggcata chr9:131945827-131945907 57 1.51e-05 TTGATTAGTG ATGTCTGC CAAGGGCTCA chr9:116986259-116986339 49 1.51e-05 ttgataagtg atgtctgc cttggctggg chr19:19328090-19328170 34 1.51e-05 TTGATTAGTG ATGTCTGC CAAGGGTGGA chr22:37397203-37397283 55 1.51e-05 ttgactagtg atgtctgc catgaatgca chr22:37521364-37521444 32 1.51e-05 tcaattagaa atgtctgc cgtgcatggg chr9:133263479-133263559 56 1.51e-05 tcgattagtg atgtctgc cctggcacag chr1:38706441-38706521 62 1.51e-05 TCTATTAGTG ATGTCTGC TGTGGATGAA chr19:8991684-8991764 42 1.51e-05 tcaattggtg atgtctgc catgAATGCT chr10:73104800-73104880 49 1.51e-05 ttgattagtg atgtctgc tctgggtgca chr15:68285406-68285486 60 1.51e-05 tcgcttgatc atgtctgc caggctgtgg chr11:12009073-12009153 69 1.51e-05 ttgattagta atgtctgc catg chr9:132181926-132182006 53 1.51e-05 tcaattagta atgtctgc catggacaca chr20:35028174-35028254 23 1.51e-05 TCCATTAGTT ATGTCTGC CACAGGTGTA chr11:64765783-64765863 26 1.51e-05 ttgattagca atgtctgc caCAccatga chr2:168799378-168799458 42 1.51e-05 ttgattagcc atgtctgc catgagcaAA chr22:36475208-36475288 36 1.51e-05 TCAATTGGTA ATGTCTGC CCTTGGTGCA chr22:36841506-36841586 34 1.51e-05 tcgactggca atgtctgc tctgggtgtt chr7:5607605-5607685 51 1.51e-05 TTGATTGGTA ATGTCTGC CATGGTGCAA chr21:16437274-16437354 42 1.51e-05 CTCTGCTGCA ATGTCTGC GAGGCTGACT chr5:171986056-171986136 60 3.22e-05 TCATCTAGCA ATGCCTGC TGCGGCACGA chr3:10803945-10804025 51 3.22e-05 tcgattagct atgcctgc ctcaggtgcc chr1:54485667-54485747 66 3.22e-05 ttgactagtg atgcctgc catgggt chr20:45670300-45670380 38 3.22e-05 tcaattagtg atgcctgc catgaccacg chr2:119542614-119542694 69 3.22e-05 tcgattcatg atgcctgc catg chr10:50587773-50587853 70 3.22e-05 GTGCCATTGC ATGCCTGC ACC chr1:154767257-154767337 38 4.55e-05 tcgattggtt atgtctgt tatggatgca chr10:73010758-73010838 47 4.55e-05 tcaattagtg atgtctgt catgggctca chr20:55753921-55754001 53 4.55e-05 tctattagca atgtctgt catgagcaca chr19:50170914-50170994 36 4.55e-05 tcaattggtg atgtctgt agtgagtgag chr1:23219923-23220003 57 6.26e-05 tagattagta ctgtctgc tccaggcaag chr19:55687605-55687685 30 6.26e-05 TTGACTAGTG CTGTCTGC CACAGGCAGG chr19:54448872-54448952 46 6.26e-05 TCAATTGGTG CTGTCTGC CTTGCCTGCA chr10:64603512-64603592 66 6.26e-05 TTGATTAGCA CTGTCTGC TTTAAGC chr12:124972480-12497256 29 6.26e-05 TAGATTAGTT CTGTCTGC CTGGAACACT chr10:134385554-13438563 47 7.81e-05 TTGACAGCTC ATGTCTGG CACCGCAGAT chr1:222886566-222886646 50 9.32e-05 TTCCACAAAA ATGCCTGT TTGGAAAGAG chr20:37033935-37034015 71 9.32e-05 GTGAAAAGTA ATGCCTGT TC chr15:68974880-68974960 73 9.32e-05 gcgattggta atgcctgt chr6:157117108-157117188 22 9.32e-05 TGCTCTGCTC ATGCCTGT TTGCGGTGGG chr6:138026623-138026703 1 1.06e-04 . ATTTCTGC ACAGGGTGGC chr1:178062785-178062865 16 1.38e-04 CCGACTTTTC CTGCCTGC GGCGCAGTCC chr3:46457805-46457885 37 1.71e-04 GATCTTACCG ATGCCTGG GGATAGGGAG chr7:129076321-129076401 16 1.71e-04 TGCACTCTTC ATGCCTGG AAATGAACAA chr6:37321777-37321857 61 1.71e-04 GCGATTGCTT CTGTCTGT TATTTAGATA chr15:31195992-31196072 69 1.71e-04 TCGGCTGGGA ATGCCTGG AAGC chr19:5358358-5358438 31 1.71e-04 tttattagtg atgcctgG GCCTTgactc chrX:54466730-54466810 10 1.89e-04 CTTGCTGCC AGGTCTGC GGAAAAGAGA chr12:109980010-10998009 40 2.21e-04 ttactaattg attcctgc actGTGTCTT chr10:131934604-13193468 63 2.21e-04 TGGATTGCTT CTGTCTgg cggcggcagc chr3:39149094-39149174 33 2.21e-04 TCGGCGCTCG ATTCCTGC GCCTTGTGAC chr14:66974561-66974641 49 2.21e-04 GGGATTGCTT CTGTCTGG GGCCCGGCCG chr16:86701900-86701980 45 2.21e-04 tctctctcca ctgtctgg gcagagtctc chr11:10737778-10737858 37 2.47e-04 TTCGATTGGT ATGCCTTC TCCTAAAATA chr11:65676913-65676993 56 2.47e-04 cacttaactc atttctgt tgtcatcgat chr14:21517729-21517809 33 2.47e-04 tcatctagtc atgccttc ctcatgttgc chr4:71587493-71587573 24 2.60e-04 GCATTGTGTT ATGTCTGA TCACAGTTTG chr14:89592963-89593043 63 2.72e-04 tcaatcatag atgtcttt ccaactttcc chr11:12561981-12562061 70 2.72e-04 TTGACTAGTG ATGTCTTT GGG chr14:69618474-69618554 53 2.89e-04 ATCGATTCAG CTGCCTGT CGCTAGGAGC chr19:47509250-47509330 5 2.89e-04 TTCC CTGCCTGT GCCCATAGCA chr9:113091193-113091273 66 3.41e-04 ttgattagtg aggcctgc cacagca chr9:136890492-136890572 58 3.41e-04 TCGGCTCGCC AGGCCTGC GGCGCTGCCA chr4:6988858-6988938 50 3.41e-04 TCGCCTCGCT GTGTCTGC GCGCGATTGA chr19:16847692-16847772 31 3.41e-04 tcacagaact ctttctgc agagcTGAAT chr17:62340750-62340830 57 3.85e-04 GCGATTTGTC AGGTCTGT TAAAGGGGCC chr16:12897780-12897860 21 4.18e-04 gCCACTAGTG CTGCCTGG GCGGAGCGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:42199920-42200000 1.5e-05 42_[+1]_30 chr2:121824279-121824359 1.5e-05 37_[+1]_35 chr22:23419246-23419326 1.5e-05 36_[+1]_36 chr2:68353881-68353961 1.5e-05 35_[+1]_37 chr1:116820966-116821046 1.5e-05 32_[+1]_40 chr16:84907896-84907976 1.5e-05 71_[+1]_1 chr9:119196758-119196838 1.5e-05 40_[+1]_32 chr17:1933354-1933434 1.5e-05 47_[+1]_25 chr11:69055580-69055660 1.5e-05 37_[+1]_35 chr2:97222807-97222887 1.5e-05 41_[+1]_31 chr12:117080651-11708073 1.5e-05 42_[+1]_30 chr5:173104415-173104495 1.5e-05 71_[+1]_1 chr16:88371913-88371993 1.5e-05 27_[+1]_45 chr19:761788-761868 1.5e-05 41_[+1]_31 chr16:87841854-87841934 1.5e-05 50_[+1]_22 chr19:17647911-17647991 1.5e-05 57_[+1]_15 chr1:233293153-233293233 1.5e-05 29_[+1]_43 chr10:63584920-63585000 1.5e-05 43_[+1]_29 chr19:17660025-17660105 1.5e-05 71_[+1]_1 chr4:4208083-4208163 1.5e-05 50_[+1]_22 chr9:133333553-133333633 1.5e-05 27_[+1]_45 chr19:48606788-48606868 1.5e-05 60_[+1]_12 chr7:76896627-76896707 1.5e-05 49_[+1]_23 chr9:131945827-131945907 1.5e-05 56_[+1]_16 chr9:116986259-116986339 1.5e-05 48_[+1]_24 chr19:19328090-19328170 1.5e-05 33_[+1]_39 chr22:37397203-37397283 1.5e-05 54_[+1]_18 chr22:37521364-37521444 1.5e-05 31_[+1]_41 chr9:133263479-133263559 1.5e-05 55_[+1]_17 chr1:38706441-38706521 1.5e-05 61_[+1]_11 chr19:8991684-8991764 1.5e-05 41_[+1]_31 chr10:73104800-73104880 1.5e-05 48_[+1]_24 chr15:68285406-68285486 1.5e-05 59_[+1]_13 chr11:12009073-12009153 1.5e-05 68_[+1]_4 chr9:132181926-132182006 1.5e-05 52_[+1]_20 chr20:35028174-35028254 1.5e-05 22_[+1]_50 chr11:64765783-64765863 1.5e-05 25_[+1]_47 chr2:168799378-168799458 1.5e-05 41_[+1]_31 chr22:36475208-36475288 1.5e-05 35_[+1]_37 chr22:36841506-36841586 1.5e-05 33_[+1]_39 chr7:5607605-5607685 1.5e-05 50_[+1]_22 chr21:16437274-16437354 1.5e-05 41_[+1]_31 chr5:171986056-171986136 3.2e-05 59_[+1]_13 chr3:10803945-10804025 3.2e-05 50_[+1]_22 chr1:54485667-54485747 3.2e-05 65_[+1]_7 chr20:45670300-45670380 3.2e-05 37_[+1]_35 chr2:119542614-119542694 3.2e-05 68_[+1]_4 chr10:50587773-50587853 3.2e-05 69_[+1]_3 chr1:154767257-154767337 4.5e-05 37_[+1]_35 chr10:73010758-73010838 4.5e-05 46_[+1]_26 chr20:55753921-55754001 4.5e-05 52_[+1]_20 chr19:50170914-50170994 4.5e-05 35_[+1]_37 chr1:23219923-23220003 6.3e-05 56_[+1]_16 chr19:55687605-55687685 6.3e-05 29_[+1]_43 chr19:54448872-54448952 6.3e-05 45_[+1]_27 chr10:64603512-64603592 6.3e-05 65_[+1]_7 chr12:124972480-12497256 6.3e-05 28_[+1]_44 chr10:134385554-13438563 7.8e-05 46_[+1]_26 chr1:222886566-222886646 9.3e-05 49_[+1]_23 chr20:37033935-37034015 9.3e-05 70_[+1]_2 chr15:68974880-68974960 9.3e-05 72_[+1] chr6:157117108-157117188 9.3e-05 21_[+1]_51 chr6:138026623-138026703 0.00011 [+1]_72 chr1:178062785-178062865 0.00014 15_[+1]_57 chr3:46457805-46457885 0.00017 36_[+1]_36 chr7:129076321-129076401 0.00017 15_[+1]_57 chr6:37321777-37321857 0.00017 60_[+1]_12 chr15:31195992-31196072 0.00017 68_[+1]_4 chr19:5358358-5358438 0.00017 30_[+1]_42 chrX:54466730-54466810 0.00019 9_[+1]_63 chr12:109980010-10998009 0.00022 39_[+1]_33 chr10:131934604-13193468 0.00022 62_[+1]_10 chr3:39149094-39149174 0.00022 32_[+1]_40 chr14:66974561-66974641 0.00022 48_[+1]_24 chr16:86701900-86701980 0.00022 44_[+1]_28 chr11:10737778-10737858 0.00025 36_[+1]_36 chr11:65676913-65676993 0.00025 55_[+1]_17 chr14:21517729-21517809 0.00025 32_[+1]_40 chr4:71587493-71587573 0.00026 23_[+1]_49 chr14:89592963-89593043 0.00027 62_[+1]_10 chr11:12561981-12562061 0.00027 69_[+1]_3 chr14:69618474-69618554 0.00029 52_[+1]_20 chr19:47509250-47509330 0.00029 4_[+1]_68 chr9:113091193-113091273 0.00034 65_[+1]_7 chr9:136890492-136890572 0.00034 57_[+1]_15 chr4:6988858-6988938 0.00034 49_[+1]_23 chr19:16847692-16847772 0.00034 30_[+1]_42 chr17:62340750-62340830 0.00038 56_[+1]_16 chr16:12897780-12897860 0.00042 20_[+1]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGTCTGC width=8 seqs=89 chr6:42199920-42200000 ( 43) ATGTCTGC 1 chr2:121824279-121824359 ( 38) ATGTCTGC 1 chr22:23419246-23419326 ( 37) ATGTCTGC 1 chr2:68353881-68353961 ( 36) ATGTCTGC 1 chr1:116820966-116821046 ( 33) ATGTCTGC 1 chr16:84907896-84907976 ( 72) ATGTCTGC 1 chr9:119196758-119196838 ( 41) ATGTCTGC 1 chr17:1933354-1933434 ( 48) ATGTCTGC 1 chr11:69055580-69055660 ( 38) ATGTCTGC 1 chr2:97222807-97222887 ( 42) ATGTCTGC 1 chr12:117080651-11708073 ( 43) ATGTCTGC 1 chr5:173104415-173104495 ( 72) ATGTCTGC 1 chr16:88371913-88371993 ( 28) ATGTCTGC 1 chr19:761788-761868 ( 42) ATGTCTGC 1 chr16:87841854-87841934 ( 51) ATGTCTGC 1 chr19:17647911-17647991 ( 58) ATGTCTGC 1 chr1:233293153-233293233 ( 30) ATGTCTGC 1 chr10:63584920-63585000 ( 44) ATGTCTGC 1 chr19:17660025-17660105 ( 72) ATGTCTGC 1 chr4:4208083-4208163 ( 51) ATGTCTGC 1 chr9:133333553-133333633 ( 28) ATGTCTGC 1 chr19:48606788-48606868 ( 61) ATGTCTGC 1 chr7:76896627-76896707 ( 50) ATGTCTGC 1 chr9:131945827-131945907 ( 57) ATGTCTGC 1 chr9:116986259-116986339 ( 49) ATGTCTGC 1 chr19:19328090-19328170 ( 34) ATGTCTGC 1 chr22:37397203-37397283 ( 55) ATGTCTGC 1 chr22:37521364-37521444 ( 32) ATGTCTGC 1 chr9:133263479-133263559 ( 56) ATGTCTGC 1 chr1:38706441-38706521 ( 62) ATGTCTGC 1 chr19:8991684-8991764 ( 42) ATGTCTGC 1 chr10:73104800-73104880 ( 49) ATGTCTGC 1 chr15:68285406-68285486 ( 60) ATGTCTGC 1 chr11:12009073-12009153 ( 69) ATGTCTGC 1 chr9:132181926-132182006 ( 53) ATGTCTGC 1 chr20:35028174-35028254 ( 23) ATGTCTGC 1 chr11:64765783-64765863 ( 26) ATGTCTGC 1 chr2:168799378-168799458 ( 42) ATGTCTGC 1 chr22:36475208-36475288 ( 36) ATGTCTGC 1 chr22:36841506-36841586 ( 34) ATGTCTGC 1 chr7:5607605-5607685 ( 51) ATGTCTGC 1 chr21:16437274-16437354 ( 42) ATGTCTGC 1 chr5:171986056-171986136 ( 60) ATGCCTGC 1 chr3:10803945-10804025 ( 51) ATGCCTGC 1 chr1:54485667-54485747 ( 66) ATGCCTGC 1 chr20:45670300-45670380 ( 38) ATGCCTGC 1 chr2:119542614-119542694 ( 69) ATGCCTGC 1 chr10:50587773-50587853 ( 70) ATGCCTGC 1 chr1:154767257-154767337 ( 38) ATGTCTGT 1 chr10:73010758-73010838 ( 47) ATGTCTGT 1 chr20:55753921-55754001 ( 53) ATGTCTGT 1 chr19:50170914-50170994 ( 36) ATGTCTGT 1 chr1:23219923-23220003 ( 57) CTGTCTGC 1 chr19:55687605-55687685 ( 30) CTGTCTGC 1 chr19:54448872-54448952 ( 46) CTGTCTGC 1 chr10:64603512-64603592 ( 66) CTGTCTGC 1 chr12:124972480-12497256 ( 29) CTGTCTGC 1 chr10:134385554-13438563 ( 47) ATGTCTGG 1 chr1:222886566-222886646 ( 50) ATGCCTGT 1 chr20:37033935-37034015 ( 71) ATGCCTGT 1 chr15:68974880-68974960 ( 73) ATGCCTGT 1 chr6:157117108-157117188 ( 22) ATGCCTGT 1 chr6:138026623-138026703 ( 1) ATTTCTGC 1 chr1:178062785-178062865 ( 16) CTGCCTGC 1 chr3:46457805-46457885 ( 37) ATGCCTGG 1 chr7:129076321-129076401 ( 16) ATGCCTGG 1 chr6:37321777-37321857 ( 61) CTGTCTGT 1 chr15:31195992-31196072 ( 69) ATGCCTGG 1 chr19:5358358-5358438 ( 31) ATGCCTGG 1 chrX:54466730-54466810 ( 10) AGGTCTGC 1 chr12:109980010-10998009 ( 40) ATTCCTGC 1 chr10:131934604-13193468 ( 63) CTGTCTGG 1 chr3:39149094-39149174 ( 33) ATTCCTGC 1 chr14:66974561-66974641 ( 49) CTGTCTGG 1 chr16:86701900-86701980 ( 45) CTGTCTGG 1 chr11:10737778-10737858 ( 37) ATGCCTTC 1 chr11:65676913-65676993 ( 56) ATTTCTGT 1 chr14:21517729-21517809 ( 33) ATGCCTTC 1 chr4:71587493-71587573 ( 24) ATGTCTGA 1 chr14:89592963-89593043 ( 63) ATGTCTTT 1 chr11:12561981-12562061 ( 70) ATGTCTTT 1 chr14:69618474-69618554 ( 53) CTGCCTGT 1 chr19:47509250-47509330 ( 5) CTGCCTGT 1 chr9:113091193-113091273 ( 66) AGGCCTGC 1 chr9:136890492-136890572 ( 58) AGGCCTGC 1 chr4:6988858-6988938 ( 50) GTGTCTGC 1 chr19:16847692-16847772 ( 31) CTTTCTGC 1 chr17:62340750-62340830 ( 57) AGGTCTGT 1 chr16:12897780-12897860 ( 21) CTGCCTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.04162 E= 2.5e-077 184 -75 -459 -1312 -1312 -1312 -259 204 -1312 -1312 180 -205 -1312 3 -1312 165 -1312 192 -1312 -1312 -1312 -1312 -1312 210 -1312 -1312 182 -237 -437 145 -142 -47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 89 E= 2.5e-077 0.831461 0.157303 0.011236 0.000000 0.000000 0.000000 0.044944 0.955056 0.000000 0.000000 0.943820 0.056180 0.000000 0.269663 0.000000 0.730337 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.955056 0.044944 0.011236 0.719101 0.101124 0.168539 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTCTGC MEME-1 regular expression -------------------------------------------------------------------------------- ATG[TC]CTGC -------------------------------------------------------------------------------- Time 4.94 secs. ******************************************************************************** ******************************************************************************** MOTIF ATYRATYR MEME-2 width = 8 sites = 181 llr = 1143 E-value = 1.9e-071 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 Description -------------------------------------------------------------------------------- Simplified A 8::3a::6 pos.-specific C 116:::31 probability G 1:16::13 matrix T :831:a6: bits 2.1 * 1.9 ** 1.7 ** 1.5 ** Relative 1.3 ** ** Entropy 1.1 ** ** (9.1 bits) 0.8 ** ** 0.6 ** ***** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATCGATTA consensus TA CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:203776375-203776455 71 1.14e-05 TTTAGGAGTC ATCGATTA GA chr3:10803945-10804025 40 1.14e-05 gagtgctagg atcgatta gctatgcctg chr11:65676913-65676993 68 1.14e-05 ttctgttgtc atcgatta ctttt chr19:48606788-48606868 50 1.14e-05 atgtgccaag atcgatta gtcatgtctg chr10:115282392-11528247 50 1.14e-05 gacatcacta atcgatta cagatctctt chr9:133263479-133263559 45 1.14e-05 gagtgttggg atcgatta gtgatgtctg chr11:64765783-64765863 43 1.14e-05 ccaCAccatg atcgatta gtgatgcctg chr15:67247639-67247719 68 1.14e-05 gccactacca atcgatta AGGAT chr11:69055580-69055660 27 2.13e-05 GGATTCTGCA ATCAATTA GTTATGTCTG chr12:114197112-11419719 48 2.13e-05 gacatcacta atcaatta cagcattctt chr20:45670300-45670380 27 2.13e-05 gtgtgcaggg atcaatta gtgatgcctg chr19:8991684-8991764 63 2.13e-05 gAATGCTGCA ATCAATTA ATGATGTCTG chr9:132181926-132182006 42 2.13e-05 gagtgctgtg atcaatta gtaatgtctg chr6:42199920-42200000 32 3.14e-05 aagtgtggtg attgatta gtgatgtctg chr2:121824279-121824359 27 3.14e-05 gtgtgctgcc attgatta gtaatgtctg chr2:68353881-68353961 25 3.14e-05 gagtggcatg attgatta gtcatgtctg chr1:116820966-116821046 22 3.14e-05 agagtgcatg attgatta gcaatgtctg chr2:97222807-97222887 31 3.14e-05 cagtgatgca attgatta gtaatgtctg chr12:117080651-11708073 32 3.14e-05 GGTtgctctg attgatta gtgatgtctg chr9:113091193-113091273 55 3.14e-05 gaaaactggg attgatta gtgaggcctg chr4:4208083-4208163 6 3.14e-05 ctgca attgatta aggatgtctt chr9:133333553-133333633 17 3.14e-05 aaagagaGCT ATTGATTA GCAATGTCTG chr9:131945827-131945907 46 3.14e-05 GGGTGCTCCA ATTGATTA GTGATGTCTG chr19:19328090-19328170 23 3.14e-05 TAGTGCAGAG ATTGATTA GTGATGTCTG chr22:37521364-37521444 54 3.14e-05 catgggTGCA ATTGATTA GTAATGTCTG chr10:73104800-73104880 38 3.14e-05 gggtgctggg attgatta gtgatgtctg chr19:5358358-5358438 68 3.14e-05 gagttctgtt attgatta gtgat chr11:12009073-12009153 58 3.14e-05 caactctgca attgatta gtaatgtctg chr2:168799378-168799458 31 3.14e-05 tagaactgtg attgatta gccatgtctg chr10:64603512-64603592 55 3.14e-05 catctgggcA ATTGATTA GCACTGTCTG chr16:27214777-27214857 8 4.44e-05 CCACGGC ATCGATCA CTCGGCGCTC chr16:27930219-27930299 46 4.44e-05 gacattgcta atcgatca tggcactctc chr15:31195992-31196072 7 4.44e-05 AAGGAG ATCGATCA CTCGAGCCTC chr1:154767257-154767337 27 5.77e-05 gaatgctggg atcgattg gttatgtctg chr16:87841854-87841934 40 5.77e-05 CAGTGCTGCC ATCGATTG CTTATGTCTG chr11:118401845-11840192 5 5.77e-05 GGGC ATCGATTG GCCCCGCCTG chr19:15537468-15537548 62 5.77e-05 gccactacca atcgattg aaatggcaca chr3:69193036-69193116 8 7.75e-05 attacta atcaatca taatactctc chr19:8139591-8139671 64 7.75e-05 gacatcacta atcaatca cagcactct chr9:133053277-133053357 48 7.75e-05 gacattgcta atcaatca cagacctttt chr9:128239122-128239202 26 7.75e-05 gacatttcta atcaatca cagagtttct chr16:12253695-12253775 41 7.75e-05 gacattacta atcaatca ctgcactctt chr20:4042752-4042832 23 7.75e-05 gacattatga atcaatca tggcagtctt chr16:81588006-81588086 50 7.75e-05 gacatcaata atcaatca ccactctttc chr16:9531102-9531182 16 7.75e-05 gacatcacta atcaatca tggcactACC chr19:16847692-16847772 16 7.75e-05 gacattacta atcaatca cagaactctt chr22:23857597-23857677 62 8.90e-05 gacattacta attgatca cagcactctt chr9:100967172-100967252 59 8.90e-05 gacataagta attgatca cagtactctt chr5:34530920-34531000 43 8.90e-05 gacattacta attgatca cagcatttta chr2:70758720-70758800 22 8.90e-05 gacattacta attgatca cagcactact chr19:965288-965368 57 8.90e-05 GACATTACTA ATTGATCA CTGTTTTTCC chr17:41869118-41869198 1 8.90e-05 . attgatca cagcactctc chr8:19202644-19202724 45 1.00e-04 gacatgacta atcaattg cagcactctc chr1:237108455-237108535 40 1.00e-04 gacatcacta atcaattg tagcactcCC chr11:44799923-44800003 22 1.00e-04 gacatcacca atcaattg cagcactttt chr10:71567643-71567723 29 1.00e-04 gacattatta atcaattg ctgcacactt chr19:50170914-50170994 25 1.00e-04 aagtgctgtg atcaattg gtgatgtctg chr3:5304341-5304421 45 1.12e-04 gacattgcta attgattg ctgcactttt chr9:133373801-133373881 44 1.12e-04 GCAATGGGTG ATTGATTG CTTCGGTCTG chr19:54448872-54448952 9 1.12e-04 gtgttgcc attgattg gtgctgtctg chr22:32870664-32870744 33 1.27e-04 GCGCGGAGTC ATCGATCG GCCGACCCCG chr17:1933354-1933434 38 1.27e-04 CCGATCGGCG ATCGATCG CAATGTCTGC chr20:36832149-36832229 18 1.37e-04 ggcagacatc attaatca aacatagaat chr19:52218252-52218332 47 1.37e-04 ggcagacatc attaatca atccctgcat chr8:27381849-27381929 73 1.37e-04 TCAGGGCTGG ATTAATCA chr19:761788-761868 57 1.49e-04 tgccatgggc atggatta ggagaagagg chr20:562240-562320 18 1.69e-04 AACATCTGTC ATCTATTA GCCATGCCTA chr10:63584920-63585000 33 1.69e-04 aagtgctgtg atctatta gtaatgtctg chr1:38706441-38706521 51 1.69e-04 CAGTGTGGTG ATCTATTA GTGATGTCTG chr20:55753921-55754001 42 1.69e-04 agaggccatg atctatta gcaatgtctg chr22:23419246-23419326 26 2.21e-04 aagagtcatg gtcgatta gtgatgtctg chr10:29044083-29044163 37 2.21e-04 aggaaagaga gtcgatta cagagctgtt chr2:121544300-121544380 46 2.21e-04 GACATTAGAA GTCGATTA CTGCACTTTT chr11:102980012-10298009 11 2.45e-04 ACCCCTTACA ATCGATGA CCGCAGGGAG chr1:46972412-46972492 56 2.45e-04 TGCCgagtga atcgatga atgagtgggt chrX:48455825-48455905 29 2.58e-04 AAGGATGCCT ATCGATTC GCTCTGGGCT chr14:69618474-69618554 43 2.58e-04 GCAATAGGCT ATCGATTC AGCTGCCTGT chr2:119542614-119542694 58 2.58e-04 gagtgccgtg atcgattc atgatgcctg chr5:170904283-170904363 20 2.58e-04 gacatgacta atcgattc tggtattctt chr20:37033935-37034015 33 2.91e-04 CAACCTGGCC ATGGATCA CCTCCTCCCA chr12:109726520-10972660 24 3.49e-04 GACATTGCTA ATCTATCA CAGATTCTTA chr6:20689107-20689187 42 3.49e-04 tctgtaatcc actgatta ggtctcagtc chr11:10737778-10737858 11 3.49e-04 TCTTCAAGTA ATCTATCA AAGCAGGGTT chr9:133295081-133295161 67 3.49e-04 gacatcacta atctatca ccacat chr10:73010758-73010838 36 3.49e-04 gctcagttgg gtcaatta gtgatgtctg chr19:8578590-8578670 55 4.11e-04 GGAGCTAGAC ATGGATTG TCTGAGGACC chr7:116594387-116594467 25 4.11e-04 AGGTCACCAA ATGGATTG TCGAAGGGAC chr16:84907896-84907976 61 4.11e-04 acagagcttg atagatta gtaatgtctg chr7:40098389-40098469 46 4.11e-04 TTTTTCTGCA ATGGATTG TGAATGTCTT chr1:114620972-114621052 9 4.11e-04 ATAAGAAT ATCAATGA GAGGGGACCC chr15:100023339-10002341 54 4.11e-04 gacatgacca atggattg cagcactctt chr1:23219923-23220003 46 4.11e-04 aagttctggg atagatta gtactgtctg chr16:88371913-88371993 17 4.11e-04 GTGCTCTGTG GTTGATTA GCAATGTCTG chr1:24658927-24659007 59 4.11e-04 gacattgcta atggattg cagcctgcat chr19:17647911-17647991 47 4.11e-04 cagttctggg atggattg gtgatgtctg chr1:233293153-233293233 19 4.11e-04 TACTGTTCCA GTTGATTA GAAATGTCTG chr2:196379288-196379368 18 4.11e-04 gacacgacta atcaatga tggtgtaagt chr19:36313608-36313688 11 4.11e-04 cAATATCTGT ATAGATTa agggggacta chr5:65104810-65104890 61 4.11e-04 CCAGAAAGGC ATGGATTG AGACCTAAGC chr12:124972480-12497256 18 4.11e-04 ACCAATTCCA ATAGATTA GTTCTGTCTG chr12:125837774-12583785 24 6.43e-04 ggcagacatt accaatca actgcagcac chr1:91870360-91870440 31 6.43e-04 TCGAGCGCCG ATTTATCA GCCCCTCTGA chr12:2113713-2113793 58 6.43e-04 GGCCTCACTA ATCGATGG CCGCGCCCCG chr9:139839133-139839213 45 6.43e-04 GCCCCGAGGC ATCGATGG CCGAGGAAGG chr17:34979889-34979969 19 6.43e-04 GGTTTCTGGG CTTGATTA ATCTCGCCTG chr19:1935674-1935754 19 6.43e-04 GGCAGACATC ACCAATCA ACCAATGATG chr9:136890492-136890572 3 6.43e-04 CG ATCGATGG CTTGGGCTCG chr8:142366769-142366849 72 6.43e-04 ggtagccatc accaatca a chr14:91848566-91848646 68 6.43e-04 ggcagccaca accaatca actca chr16:86701900-86701980 21 6.43e-04 ggcagacatc accaatca atcccctctc chr16:2255422-2255502 5 7.05e-04 AGCC ATCGATAA CTCTACGCTC chr12:109362123-10936220 7 7.05e-04 acacta gtcaatca cagcactatc chr19:16427590-16427670 42 7.05e-04 CAGTCAATCA gtcaatca cagacatgac chr9:135026657-135026737 59 7.05e-04 GCCATGACTA GTCAATCA CAGCACTCTG chr14:89592963-89593043 52 7.05e-04 gacattaata gtcaatca tagatgtctt chr9:126400648-126400728 55 7.05e-04 gacattacta actgatca cagagtcggg chr5:171986056-171986136 20 7.78e-04 GGGAGGACCT ATTTATTG TTAGTATGAG chr17:81023831-81023911 19 7.78e-04 ggcatgacca atggatcg ttattcaatc chr2:220246324-220246404 67 7.78e-04 gacatcacta atagatca ccactc chr6:10430444-10430524 38 8.68e-04 CATCACTCGA ATCCATTA CCTCGGTTCT chr20:18118433-18118513 6 8.68e-04 CGGCT CTCGATTG CTCACGCCTG chr1:12290000-12290080 62 8.68e-04 GCGTCGGCCG CTCGATTG GTCGGGTCGG chr19:31841731-31841811 13 8.68e-04 GCGCTGCGGG CTCGATTG CGTCTCCCTG chr7:92412308-92412388 53 8.68e-04 AGAGAACCAG ATCAATCC ATCCTTCCCA chr5:173104415-173104495 61 8.68e-04 aagtgccata atccatta gtgatgtctg chr19:45175697-45175777 36 8.68e-04 gacatcacta atcaatcc cagcattgtt chr20:34064271-34064351 11 8.68e-04 AGGCAGAGCA GTCAATTG CAGAGCTGTC chr7:76896627-76896707 39 9.59e-04 aagctctgta gttgattg gtgatgtctg chr17:27388274-27388354 16 9.59e-04 CAGGCTGAAA ATAGATTG GGGGCGGGAG chr7:5607605-5607685 40 9.59e-04 TCATTCGGTA GTTGATTG GTAATGTCTG chr7:132500633-132500713 20 1.05e-03 gacagacatc actaatca atcttgacat chr12:113338317-11333839 54 1.05e-03 ggcagacatc actaatca atacggcatc chr12:118810821-11881090 58 1.05e-03 TAGGTATTTG ATTGATGG AGCCTGGGAA chr22:31365383-31365463 14 1.05e-03 CGGGCGTGCG GTCGATCG AGCGATCGGT chr18:20147931-20148011 42 1.05e-03 TCcagacata actaatca atctcagcaa chr19:17015597-17015677 28 1.05e-03 GGCAGACATC ACTAATCA AAGGCCACCT chr12:110233017-11023309 28 1.05e-03 cagggcagac atcaataa ttgagccctg chr11:12561981-12562061 28 1.05e-03 ggcagacatt actaatca acccagcact chr9:116986259-116986339 38 1.12e-03 gagtgctgca attgataa gtgatgtctg chr1:169083257-169083337 32 1.12e-03 AGTGCCGAAC CTTGATCA GGCCAGGCCA chr12:109980010-10998009 32 1.18e-03 ggcagacatt actaattg attcctgcac chr3:64902854-64902934 21 1.18e-03 GCCAGGGATC ACCTATTA GCACTTCTGA chr10:50587773-50587853 38 1.18e-03 AGGACTGTGG CTCAATTG CTCATGTCTA chr15:68974880-68974960 62 1.18e-03 ggactcagtg agcgattg gtaatgcctg chr22:36475208-36475288 25 1.18e-03 AGCATCCATG CTCAATTG GTAATGTCTG chr17:58213096-58213176 28 1.31e-03 GGCAGGGACG ACCAATCG ACTTATCCTG chr7:4946448-4946528 66 1.31e-03 atgtgctgca cttgattg gtgatgt chr9:5630340-5630420 17 1.31e-03 AGAAGGCAGT ACCAATCG ATGTCAGAGT chr2:61244697-61244777 36 1.46e-03 CTCCCGCTGT ATGGATTC AGCTGGCAAA chr1:183952950-183953030 40 1.46e-03 GACATCACTA ATGGATTC CTTGAAGAAA chr17:42588831-42588911 18 1.46e-03 ATCAGACTga agcaatca aactccaaat chr9:119196758-119196838 30 1.56e-03 GATTTCTGCG ATCTATTC GTAATGTCTG chr1:48109991-48110071 9 1.56e-03 GCCAATTC CTTAATCA GACATTACTA chr12:25403877-25403957 7 1.56e-03 GAGCAC ACCGATGA GTTCGGGGCC chrX:122293406-122293486 55 1.56e-03 gacagcatta atctattc atgagagatt chr2:204103589-204103669 20 1.66e-03 CTCCTCGGCG ATCCATTG CTCTTTCCTC chr12:133136423-13313650 65 1.66e-03 CGCCTCGGGG CTGGATTA GTCGGGTC chr1:10448277-10448357 34 1.75e-03 GACTAAAGCA ATCAATTT GTTCCTGCAA chr2:191395234-191395314 6 1.75e-03 AAGAC AGTGATTG TCACAAGACT chr12:110140372-11014045 2 1.95e-03 a atcaatag catggcttcc chr16:68279068-68279148 6 1.95e-03 GATCC ATCGATGC GCTCGGCGCT chr1:27127092-27127172 14 1.95e-03 ttcagtaatt gtttatta atgcctattt chr17:36828659-36828739 57 1.95e-03 GTCTGATTTT ATTGATTT CTTCCACCTT chr12:108155077-10815515 53 1.95e-03 TCGAGCGCCG AGCGATCG GCCCATGGTT chr6:37321777-37321857 33 1.95e-03 CTGCTTTCGC AGCGATCG CGAGCGTGTG chr18:72922712-72922792 33 2.12e-03 CGATGTGTCT GTCTATCA GTTGAGACTG chr1:54485667-54485747 55 2.12e-03 cagaactgtg attgacta gtgatgcctg chr22:37397203-37397283 44 2.12e-03 gagtgctggc attgacta gtgatgtctg chr19:6141399-6141479 17 2.30e-03 GGCATGACCA ATGGATCC TAGGATTCTA chr20:33103361-33103441 43 2.30e-03 GCCAGCCCTA ACCAATTC ATCTCCGAGC chr16:21732031-21732111 29 2.45e-03 AACTGAGCAA ATGGATGG AAGCTAGACC chr11:46615615-46615695 17 2.65e-03 GGAACGCCCA AGCAATCG TTCAAGGAAC chr17:80376459-80376539 48 2.65e-03 GCCAGGCCCG AGCAATCG GCGGCCGAGC chr1:162602720-162602800 27 2.65e-03 GGCAAGACAG GCCGATTG CAGAGTTAGT chr3:141747468-141747548 47 2.65e-03 GTCAGACGTA AGCAATCG AGCTCAGAAA chr22:36841506-36841586 23 2.65e-03 gggtgctggg atcgactg gcaatgtctg chr10:14195856-14195936 26 2.86e-03 ctactcaggc accgatgg agcagtccct chr10:131934604-13193468 52 3.11e-03 GCCGCCGGCA CTGGATTG CTTCTGTCTg chr16:56228369-56228449 56 3.11e-03 GGCCGGAAAA GTCGATGG GGCTCAGTTC chr19:33071988-33072068 70 3.11e-03 TGGCTCCGGG CTGGATTG GTG chr19:47509250-47509330 33 3.29e-03 GACATGGCTA GCTGATCA CCGCACTCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:203776375-203776455 1.1e-05 70_[+2]_2 chr3:10803945-10804025 1.1e-05 39_[+2]_33 chr11:65676913-65676993 1.1e-05 67_[+2]_5 chr19:48606788-48606868 1.1e-05 49_[+2]_23 chr10:115282392-11528247 1.1e-05 49_[+2]_23 chr9:133263479-133263559 1.1e-05 44_[+2]_28 chr11:64765783-64765863 1.1e-05 42_[+2]_30 chr15:67247639-67247719 1.1e-05 67_[+2]_5 chr11:69055580-69055660 2.1e-05 26_[+2]_46 chr12:114197112-11419719 2.1e-05 47_[+2]_25 chr20:45670300-45670380 2.1e-05 26_[+2]_46 chr19:8991684-8991764 2.1e-05 62_[+2]_10 chr9:132181926-132182006 2.1e-05 41_[+2]_31 chr6:42199920-42200000 3.1e-05 31_[+2]_41 chr2:121824279-121824359 3.1e-05 26_[+2]_46 chr2:68353881-68353961 3.1e-05 24_[+2]_48 chr1:116820966-116821046 3.1e-05 21_[+2]_51 chr2:97222807-97222887 3.1e-05 30_[+2]_42 chr12:117080651-11708073 3.1e-05 31_[+2]_41 chr9:113091193-113091273 3.1e-05 54_[+2]_18 chr4:4208083-4208163 3.1e-05 5_[+2]_67 chr9:133333553-133333633 3.1e-05 16_[+2]_56 chr9:131945827-131945907 3.1e-05 45_[+2]_27 chr19:19328090-19328170 3.1e-05 22_[+2]_50 chr22:37521364-37521444 3.1e-05 53_[+2]_19 chr10:73104800-73104880 3.1e-05 37_[+2]_35 chr19:5358358-5358438 3.1e-05 67_[+2]_5 chr11:12009073-12009153 3.1e-05 57_[+2]_15 chr2:168799378-168799458 3.1e-05 30_[+2]_42 chr10:64603512-64603592 3.1e-05 54_[+2]_18 chr16:27214777-27214857 4.4e-05 7_[+2]_65 chr16:27930219-27930299 4.4e-05 45_[+2]_27 chr15:31195992-31196072 4.4e-05 6_[+2]_66 chr1:154767257-154767337 5.8e-05 26_[+2]_46 chr16:87841854-87841934 5.8e-05 39_[+2]_33 chr11:118401845-11840192 5.8e-05 4_[+2]_68 chr19:15537468-15537548 5.8e-05 61_[+2]_11 chr3:69193036-69193116 7.8e-05 7_[+2]_65 chr19:8139591-8139671 7.8e-05 63_[+2]_9 chr9:133053277-133053357 7.8e-05 47_[+2]_25 chr9:128239122-128239202 7.8e-05 25_[+2]_47 chr16:12253695-12253775 7.8e-05 40_[+2]_32 chr20:4042752-4042832 7.8e-05 22_[+2]_50 chr16:81588006-81588086 7.8e-05 49_[+2]_23 chr16:9531102-9531182 7.8e-05 15_[+2]_57 chr19:16847692-16847772 7.8e-05 15_[+2]_57 chr22:23857597-23857677 8.9e-05 61_[+2]_11 chr9:100967172-100967252 8.9e-05 58_[+2]_14 chr5:34530920-34531000 8.9e-05 42_[+2]_30 chr2:70758720-70758800 8.9e-05 21_[+2]_51 chr19:965288-965368 8.9e-05 56_[+2]_16 chr17:41869118-41869198 8.9e-05 [+2]_72 chr8:19202644-19202724 0.0001 44_[+2]_28 chr1:237108455-237108535 0.0001 39_[+2]_33 chr11:44799923-44800003 0.0001 21_[+2]_51 chr10:71567643-71567723 0.0001 28_[+2]_44 chr19:50170914-50170994 0.0001 24_[+2]_48 chr3:5304341-5304421 0.00011 44_[+2]_28 chr9:133373801-133373881 0.00011 43_[+2]_29 chr19:54448872-54448952 0.00011 8_[+2]_64 chr22:32870664-32870744 0.00013 32_[+2]_40 chr17:1933354-1933434 0.00013 37_[+2]_35 chr20:36832149-36832229 0.00014 17_[+2]_55 chr19:52218252-52218332 0.00014 46_[+2]_26 chr8:27381849-27381929 0.00014 72_[+2] chr19:761788-761868 0.00015 56_[+2]_16 chr20:562240-562320 0.00017 17_[+2]_55 chr10:63584920-63585000 0.00017 32_[+2]_40 chr1:38706441-38706521 0.00017 50_[+2]_22 chr20:55753921-55754001 0.00017 41_[+2]_31 chr22:23419246-23419326 0.00022 25_[+2]_47 chr10:29044083-29044163 0.00022 36_[+2]_36 chr2:121544300-121544380 0.00022 45_[+2]_27 chr11:102980012-10298009 0.00024 10_[+2]_62 chr1:46972412-46972492 0.00024 55_[+2]_17 chrX:48455825-48455905 0.00026 28_[+2]_44 chr14:69618474-69618554 0.00026 42_[+2]_30 chr2:119542614-119542694 0.00026 57_[+2]_15 chr5:170904283-170904363 0.00026 19_[+2]_53 chr20:37033935-37034015 0.00029 32_[+2]_40 chr12:109726520-10972660 0.00035 23_[+2]_49 chr6:20689107-20689187 0.00035 41_[+2]_31 chr11:10737778-10737858 0.00035 10_[+2]_62 chr9:133295081-133295161 0.00035 66_[+2]_6 chr10:73010758-73010838 0.00035 35_[+2]_37 chr19:8578590-8578670 0.00041 54_[+2]_18 chr7:116594387-116594467 0.00041 24_[+2]_48 chr16:84907896-84907976 0.00041 60_[+2]_12 chr7:40098389-40098469 0.00041 45_[+2]_27 chr1:114620972-114621052 0.00041 8_[+2]_64 chr15:100023339-10002341 0.00041 53_[+2]_19 chr1:23219923-23220003 0.00041 45_[+2]_27 chr16:88371913-88371993 0.00041 16_[+2]_56 chr1:24658927-24659007 0.00041 58_[+2]_14 chr19:17647911-17647991 0.00041 46_[+2]_26 chr1:233293153-233293233 0.00041 18_[+2]_54 chr2:196379288-196379368 0.00041 17_[+2]_55 chr19:36313608-36313688 0.00041 10_[+2]_62 chr5:65104810-65104890 0.00041 60_[+2]_12 chr12:124972480-12497256 0.00041 17_[+2]_55 chr12:125837774-12583785 0.00064 23_[+2]_49 chr1:91870360-91870440 0.00064 30_[+2]_42 chr12:2113713-2113793 0.00064 57_[+2]_15 chr9:139839133-139839213 0.00064 44_[+2]_28 chr17:34979889-34979969 0.00064 18_[+2]_54 chr19:1935674-1935754 0.00064 18_[+2]_54 chr9:136890492-136890572 0.00064 2_[+2]_70 chr8:142366769-142366849 0.00064 71_[+2]_1 chr14:91848566-91848646 0.00064 67_[+2]_5 chr16:86701900-86701980 0.00064 20_[+2]_52 chr16:2255422-2255502 0.00071 4_[+2]_68 chr12:109362123-10936220 0.00071 6_[+2]_66 chr19:16427590-16427670 0.00071 41_[+2]_31 chr9:135026657-135026737 0.00071 58_[+2]_14 chr14:89592963-89593043 0.00071 51_[+2]_21 chr9:126400648-126400728 0.00071 54_[+2]_18 chr5:171986056-171986136 0.00078 19_[+2]_53 chr17:81023831-81023911 0.00078 18_[+2]_54 chr2:220246324-220246404 0.00078 66_[+2]_6 chr6:10430444-10430524 0.00087 37_[+2]_35 chr20:18118433-18118513 0.00087 5_[+2]_67 chr1:12290000-12290080 0.00087 61_[+2]_11 chr19:31841731-31841811 0.00087 12_[+2]_60 chr7:92412308-92412388 0.00087 52_[+2]_20 chr5:173104415-173104495 0.00087 60_[+2]_12 chr19:45175697-45175777 0.00087 35_[+2]_37 chr20:34064271-34064351 0.00087 10_[+2]_62 chr7:76896627-76896707 0.00096 38_[+2]_34 chr17:27388274-27388354 0.00096 15_[+2]_57 chr7:5607605-5607685 0.00096 39_[+2]_33 chr7:132500633-132500713 0.001 19_[+2]_53 chr12:113338317-11333839 0.001 53_[+2]_19 chr12:118810821-11881090 0.001 57_[+2]_15 chr22:31365383-31365463 0.001 13_[+2]_59 chr18:20147931-20148011 0.001 41_[+2]_31 chr19:17015597-17015677 0.001 27_[+2]_45 chr12:110233017-11023309 0.001 27_[+2]_45 chr11:12561981-12562061 0.001 27_[+2]_45 chr9:116986259-116986339 0.0011 37_[+2]_35 chr1:169083257-169083337 0.0011 31_[+2]_41 chr12:109980010-10998009 0.0012 31_[+2]_41 chr3:64902854-64902934 0.0012 20_[+2]_52 chr10:50587773-50587853 0.0012 37_[+2]_35 chr15:68974880-68974960 0.0012 61_[+2]_11 chr22:36475208-36475288 0.0012 24_[+2]_48 chr17:58213096-58213176 0.0013 27_[+2]_45 chr7:4946448-4946528 0.0013 65_[+2]_7 chr9:5630340-5630420 0.0013 16_[+2]_56 chr2:61244697-61244777 0.0015 35_[+2]_37 chr1:183952950-183953030 0.0015 39_[+2]_33 chr17:42588831-42588911 0.0015 17_[+2]_55 chr9:119196758-119196838 0.0016 29_[+2]_43 chr1:48109991-48110071 0.0016 8_[+2]_64 chr12:25403877-25403957 0.0016 6_[+2]_66 chrX:122293406-122293486 0.0016 54_[+2]_18 chr2:204103589-204103669 0.0017 19_[+2]_53 chr12:133136423-13313650 0.0017 64_[+2]_8 chr1:10448277-10448357 0.0018 33_[+2]_39 chr2:191395234-191395314 0.0018 5_[+2]_67 chr12:110140372-11014045 0.0019 1_[+2]_71 chr16:68279068-68279148 0.0019 5_[+2]_67 chr1:27127092-27127172 0.0019 13_[+2]_59 chr17:36828659-36828739 0.0019 56_[+2]_16 chr12:108155077-10815515 0.0019 52_[+2]_20 chr6:37321777-37321857 0.0019 32_[+2]_40 chr18:72922712-72922792 0.0021 32_[+2]_40 chr1:54485667-54485747 0.0021 54_[+2]_18 chr22:37397203-37397283 0.0021 43_[+2]_29 chr19:6141399-6141479 0.0023 16_[+2]_56 chr20:33103361-33103441 0.0023 42_[+2]_30 chr16:21732031-21732111 0.0025 28_[+2]_44 chr11:46615615-46615695 0.0027 16_[+2]_56 chr17:80376459-80376539 0.0027 47_[+2]_25 chr1:162602720-162602800 0.0027 26_[+2]_46 chr3:141747468-141747548 0.0027 46_[+2]_26 chr22:36841506-36841586 0.0027 22_[+2]_50 chr10:14195856-14195936 0.0029 25_[+2]_47 chr10:131934604-13193468 0.0031 51_[+2]_21 chr16:56228369-56228449 0.0031 55_[+2]_17 chr19:33071988-33072068 0.0031 69_[+2]_3 chr19:47509250-47509330 0.0033 32_[+2]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATYRATYR width=8 seqs=181 chr2:203776375-203776455 ( 71) ATCGATTA 1 chr3:10803945-10804025 ( 40) ATCGATTA 1 chr11:65676913-65676993 ( 68) ATCGATTA 1 chr19:48606788-48606868 ( 50) ATCGATTA 1 chr10:115282392-11528247 ( 50) ATCGATTA 1 chr9:133263479-133263559 ( 45) ATCGATTA 1 chr11:64765783-64765863 ( 43) ATCGATTA 1 chr15:67247639-67247719 ( 68) ATCGATTA 1 chr11:69055580-69055660 ( 27) ATCAATTA 1 chr12:114197112-11419719 ( 48) ATCAATTA 1 chr20:45670300-45670380 ( 27) ATCAATTA 1 chr19:8991684-8991764 ( 63) ATCAATTA 1 chr9:132181926-132182006 ( 42) ATCAATTA 1 chr6:42199920-42200000 ( 32) ATTGATTA 1 chr2:121824279-121824359 ( 27) ATTGATTA 1 chr2:68353881-68353961 ( 25) ATTGATTA 1 chr1:116820966-116821046 ( 22) ATTGATTA 1 chr2:97222807-97222887 ( 31) ATTGATTA 1 chr12:117080651-11708073 ( 32) ATTGATTA 1 chr9:113091193-113091273 ( 55) ATTGATTA 1 chr4:4208083-4208163 ( 6) ATTGATTA 1 chr9:133333553-133333633 ( 17) ATTGATTA 1 chr9:131945827-131945907 ( 46) ATTGATTA 1 chr19:19328090-19328170 ( 23) ATTGATTA 1 chr22:37521364-37521444 ( 54) ATTGATTA 1 chr10:73104800-73104880 ( 38) ATTGATTA 1 chr19:5358358-5358438 ( 68) ATTGATTA 1 chr11:12009073-12009153 ( 58) ATTGATTA 1 chr2:168799378-168799458 ( 31) ATTGATTA 1 chr10:64603512-64603592 ( 55) ATTGATTA 1 chr16:27214777-27214857 ( 8) ATCGATCA 1 chr16:27930219-27930299 ( 46) ATCGATCA 1 chr15:31195992-31196072 ( 7) ATCGATCA 1 chr1:154767257-154767337 ( 27) ATCGATTG 1 chr16:87841854-87841934 ( 40) ATCGATTG 1 chr11:118401845-11840192 ( 5) ATCGATTG 1 chr19:15537468-15537548 ( 62) ATCGATTG 1 chr3:69193036-69193116 ( 8) ATCAATCA 1 chr19:8139591-8139671 ( 64) ATCAATCA 1 chr9:133053277-133053357 ( 48) ATCAATCA 1 chr9:128239122-128239202 ( 26) ATCAATCA 1 chr16:12253695-12253775 ( 41) ATCAATCA 1 chr20:4042752-4042832 ( 23) ATCAATCA 1 chr16:81588006-81588086 ( 50) ATCAATCA 1 chr16:9531102-9531182 ( 16) ATCAATCA 1 chr19:16847692-16847772 ( 16) ATCAATCA 1 chr22:23857597-23857677 ( 62) ATTGATCA 1 chr9:100967172-100967252 ( 59) ATTGATCA 1 chr5:34530920-34531000 ( 43) ATTGATCA 1 chr2:70758720-70758800 ( 22) ATTGATCA 1 chr19:965288-965368 ( 57) ATTGATCA 1 chr17:41869118-41869198 ( 1) ATTGATCA 1 chr8:19202644-19202724 ( 45) ATCAATTG 1 chr1:237108455-237108535 ( 40) ATCAATTG 1 chr11:44799923-44800003 ( 22) ATCAATTG 1 chr10:71567643-71567723 ( 29) ATCAATTG 1 chr19:50170914-50170994 ( 25) ATCAATTG 1 chr3:5304341-5304421 ( 45) ATTGATTG 1 chr9:133373801-133373881 ( 44) ATTGATTG 1 chr19:54448872-54448952 ( 9) ATTGATTG 1 chr22:32870664-32870744 ( 33) ATCGATCG 1 chr17:1933354-1933434 ( 38) ATCGATCG 1 chr20:36832149-36832229 ( 18) ATTAATCA 1 chr19:52218252-52218332 ( 47) ATTAATCA 1 chr8:27381849-27381929 ( 73) ATTAATCA 1 chr19:761788-761868 ( 57) ATGGATTA 1 chr20:562240-562320 ( 18) ATCTATTA 1 chr10:63584920-63585000 ( 33) ATCTATTA 1 chr1:38706441-38706521 ( 51) ATCTATTA 1 chr20:55753921-55754001 ( 42) ATCTATTA 1 chr22:23419246-23419326 ( 26) GTCGATTA 1 chr10:29044083-29044163 ( 37) GTCGATTA 1 chr2:121544300-121544380 ( 46) GTCGATTA 1 chr11:102980012-10298009 ( 11) ATCGATGA 1 chr1:46972412-46972492 ( 56) ATCGATGA 1 chrX:48455825-48455905 ( 29) ATCGATTC 1 chr14:69618474-69618554 ( 43) ATCGATTC 1 chr2:119542614-119542694 ( 58) ATCGATTC 1 chr5:170904283-170904363 ( 20) ATCGATTC 1 chr20:37033935-37034015 ( 33) ATGGATCA 1 chr12:109726520-10972660 ( 24) ATCTATCA 1 chr6:20689107-20689187 ( 42) ACTGATTA 1 chr11:10737778-10737858 ( 11) ATCTATCA 1 chr9:133295081-133295161 ( 67) ATCTATCA 1 chr10:73010758-73010838 ( 36) GTCAATTA 1 chr19:8578590-8578670 ( 55) ATGGATTG 1 chr7:116594387-116594467 ( 25) ATGGATTG 1 chr16:84907896-84907976 ( 61) ATAGATTA 1 chr7:40098389-40098469 ( 46) ATGGATTG 1 chr1:114620972-114621052 ( 9) ATCAATGA 1 chr15:100023339-10002341 ( 54) ATGGATTG 1 chr1:23219923-23220003 ( 46) ATAGATTA 1 chr16:88371913-88371993 ( 17) GTTGATTA 1 chr1:24658927-24659007 ( 59) ATGGATTG 1 chr19:17647911-17647991 ( 47) ATGGATTG 1 chr1:233293153-233293233 ( 19) GTTGATTA 1 chr2:196379288-196379368 ( 18) ATCAATGA 1 chr19:36313608-36313688 ( 11) ATAGATTA 1 chr5:65104810-65104890 ( 61) ATGGATTG 1 chr12:124972480-12497256 ( 18) ATAGATTA 1 chr12:125837774-12583785 ( 24) ACCAATCA 1 chr1:91870360-91870440 ( 31) ATTTATCA 1 chr12:2113713-2113793 ( 58) ATCGATGG 1 chr9:139839133-139839213 ( 45) ATCGATGG 1 chr17:34979889-34979969 ( 19) CTTGATTA 1 chr19:1935674-1935754 ( 19) ACCAATCA 1 chr9:136890492-136890572 ( 3) ATCGATGG 1 chr8:142366769-142366849 ( 72) ACCAATCA 1 chr14:91848566-91848646 ( 68) ACCAATCA 1 chr16:86701900-86701980 ( 21) ACCAATCA 1 chr16:2255422-2255502 ( 5) ATCGATAA 1 chr12:109362123-10936220 ( 7) GTCAATCA 1 chr19:16427590-16427670 ( 42) GTCAATCA 1 chr9:135026657-135026737 ( 59) GTCAATCA 1 chr14:89592963-89593043 ( 52) GTCAATCA 1 chr9:126400648-126400728 ( 55) ACTGATCA 1 chr5:171986056-171986136 ( 20) ATTTATTG 1 chr17:81023831-81023911 ( 19) ATGGATCG 1 chr2:220246324-220246404 ( 67) ATAGATCA 1 chr6:10430444-10430524 ( 38) ATCCATTA 1 chr20:18118433-18118513 ( 6) CTCGATTG 1 chr1:12290000-12290080 ( 62) CTCGATTG 1 chr19:31841731-31841811 ( 13) CTCGATTG 1 chr7:92412308-92412388 ( 53) ATCAATCC 1 chr5:173104415-173104495 ( 61) ATCCATTA 1 chr19:45175697-45175777 ( 36) ATCAATCC 1 chr20:34064271-34064351 ( 11) GTCAATTG 1 chr7:76896627-76896707 ( 39) GTTGATTG 1 chr17:27388274-27388354 ( 16) ATAGATTG 1 chr7:5607605-5607685 ( 40) GTTGATTG 1 chr7:132500633-132500713 ( 20) ACTAATCA 1 chr12:113338317-11333839 ( 54) ACTAATCA 1 chr12:118810821-11881090 ( 58) ATTGATGG 1 chr22:31365383-31365463 ( 14) GTCGATCG 1 chr18:20147931-20148011 ( 42) ACTAATCA 1 chr19:17015597-17015677 ( 28) ACTAATCA 1 chr12:110233017-11023309 ( 28) ATCAATAA 1 chr11:12561981-12562061 ( 28) ACTAATCA 1 chr9:116986259-116986339 ( 38) ATTGATAA 1 chr1:169083257-169083337 ( 32) CTTGATCA 1 chr12:109980010-10998009 ( 32) ACTAATTG 1 chr3:64902854-64902934 ( 21) ACCTATTA 1 chr10:50587773-50587853 ( 38) CTCAATTG 1 chr15:68974880-68974960 ( 62) AGCGATTG 1 chr22:36475208-36475288 ( 25) CTCAATTG 1 chr17:58213096-58213176 ( 28) ACCAATCG 1 chr7:4946448-4946528 ( 66) CTTGATTG 1 chr9:5630340-5630420 ( 17) ACCAATCG 1 chr2:61244697-61244777 ( 36) ATGGATTC 1 chr1:183952950-183953030 ( 40) ATGGATTC 1 chr17:42588831-42588911 ( 18) AGCAATCA 1 chr9:119196758-119196838 ( 30) ATCTATTC 1 chr1:48109991-48110071 ( 9) CTTAATCA 1 chr12:25403877-25403957 ( 7) ACCGATGA 1 chrX:122293406-122293486 ( 55) ATCTATTC 1 chr2:204103589-204103669 ( 20) ATCCATTG 1 chr12:133136423-13313650 ( 65) CTGGATTA 1 chr1:10448277-10448357 ( 34) ATCAATTT 1 chr2:191395234-191395314 ( 6) AGTGATTG 1 chr12:110140372-11014045 ( 2) ATCAATAG 1 chr16:68279068-68279148 ( 6) ATCGATGC 1 chr1:27127092-27127172 ( 14) GTTTATTA 1 chr17:36828659-36828739 ( 57) ATTGATTT 1 chr12:108155077-10815515 ( 53) AGCGATCG 1 chr6:37321777-37321857 ( 33) AGCGATCG 1 chr18:72922712-72922792 ( 33) GTCTATCA 1 chr1:54485667-54485747 ( 55) ATTGACTA 1 chr22:37397203-37397283 ( 44) ATTGACTA 1 chr19:6141399-6141479 ( 17) ATGGATCC 1 chr20:33103361-33103441 ( 43) ACCAATTC 1 chr16:21732031-21732111 ( 29) ATGGATGG 1 chr11:46615615-46615695 ( 17) AGCAATCG 1 chr17:80376459-80376539 ( 48) AGCAATCG 1 chr1:162602720-162602800 ( 27) GCCGATTG 1 chr3:141747468-141747548 ( 47) AGCAATCG 1 chr22:36841506-36841586 ( 23) ATCGACTG 1 chr10:14195856-14195936 ( 26) ACCGATGG 1 chr10:131934604-13193468 ( 52) CTGGATTG 1 chr16:56228369-56228449 ( 56) GTCGATGG 1 chr19:33071988-33072068 ( 70) CTGGATTG 1 chr19:47509250-47509330 ( 33) GCTGATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.02983 E= 1.9e-071 183 -199 -137 -1414 -1414 -119 -261 185 -281 111 -153 39 41 -399 114 -159 210 -1414 -1414 -1414 -1414 -399 -1414 208 -339 35 -191 129 137 -188 22 -439 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 181 E= 1.9e-071 0.828729 0.066298 0.104972 0.000000 0.000000 0.116022 0.044199 0.839779 0.033149 0.569061 0.093923 0.303867 0.309392 0.016575 0.596685 0.077348 1.000000 0.000000 0.000000 0.000000 0.000000 0.016575 0.000000 0.983425 0.022099 0.337017 0.071823 0.569061 0.602210 0.071823 0.314917 0.011050 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATYRATYR MEME-2 regular expression -------------------------------------------------------------------------------- AT[CT][GA]AT[TC][AG] -------------------------------------------------------------------------------- Time 8.21 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAGACAT MEME-3 width = 8 sites = 59 llr = 578 E-value = 4.0e-065 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 21a:9:a: pos.-specific C :9:::a:: probability G 8::a1::: matrix T :::::::a bits 2.1 * 1.9 ** *** 1.7 ****** 1.5 ******* Relative 1.3 ******* Entropy 1.1 ******** (14.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCAGACAT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:125837774-12583785 15 1.51e-05 ctctgccatg gcagacat taccaatcaa chr1:183952950-183953030 27 1.51e-05 CAGAAAAATC GCAGACAT CACTAATGGA chr12:113338317-11333839 45 1.51e-05 tgtgctcctg gcagacat cactaatcaa chr20:36832149-36832229 9 1.51e-05 cacccatg gcagacat cattaatcaa chr3:5304341-5304421 32 1.51e-05 gtgtaatgaa gcagacat tgctaattga chr12:109980010-10998009 23 1.51e-05 ctcacccatg gcagacat tactaattga chr11:32418095-32418175 10 1.51e-05 atccccatg gcagacat cagtaatgga chr19:52218252-52218332 38 1.51e-05 ctgttttgtg gcagacat cattaatcaa chr12:114197112-11419719 35 1.51e-05 cctgcccatg gcagacat cactaatcaa chr22:23857597-23857677 49 1.51e-05 tgtgaatgtg gcagacat tactaattga chr15:100023339-10002341 41 1.51e-05 tgtgcctgtg gcagacat gaccaatgga chr19:8139591-8139671 26 1.51e-05 agcatccata gcagacat cactaatcAC chr9:133053277-133053357 35 1.51e-05 catattcatg gcagacat tgctaatcaa chr9:133295081-133295161 54 1.51e-05 gctgtccctg gcagacat cactaatcta chr9:128239122-128239202 13 1.51e-05 caggcccagg gcagacat ttctaatcaa chr19:1935674-1935754 10 1.51e-05 GTGCACAGG GCAGACAT CACCAATCAA chr17:42700870-42700950 32 1.51e-05 tgtgaccatg gcagacat cactagtgga chr19:47509250-47509330 20 1.51e-05 TGTGCCCATA GCAGACAT GGCTAGCTGA chr16:12253695-12253775 28 1.51e-05 ccgtgctttt gcagacat tactaatcaa chr2:70758720-70758800 9 1.51e-05 aacccaca gcagacat tactaattga chr16:27930219-27930299 33 1.51e-05 tttacccagg gcagacat tgctaatcga chr19:45175697-45175777 23 1.51e-05 tgcacccagg gcagacat cactaatcaa chr11:44799923-44800003 9 1.51e-05 ttttcccc gcagacat caccaatcaa chr19:6141399-6141479 36 1.51e-05 AGGATTCTAG GCAGACAT GACCAGTGGA chr10:115282392-11528247 37 1.51e-05 cttacgcatg gcagacat cactaatcga chr2:121544300-121544380 33 1.51e-05 GCCTCCTGCA GCAGACAT TAGAAGTCGA chr8:142366769-142366849 4 1.51e-05 gtg gcagacat tgctaatcaa chr19:965288-965368 44 1.51e-05 TGTGGCCAAG GCAGACAT TACTAATTGA chr18:20147931-20148011 12 1.51e-05 ACTGTTTAAG GCAGACAT AACTAATCAA chr10:71567643-71567723 16 1.51e-05 agggccctca gcagacat tattaatcaa chr20:4042752-4042832 10 1.51e-05 gtgcttatg gcagacat tatgaatcaa chr2:220246324-220246404 54 1.51e-05 ccctcccatg gcagacat cactaataga chr16:81588006-81588086 37 1.51e-05 gtgtgccctg gcagacat caataatcaa chr19:17015597-17015677 19 1.51e-05 CTTACCCCTG GCAGACAT CACTAATCAA chr16:86701900-86701980 12 1.51e-05 gatgtcagag gcagacat caccaatcaa chr19:16847692-16847772 3 1.51e-05 tg gcagacat tactaatcaa chr11:12561981-12562061 19 1.51e-05 catatctatg gcagacat tactaatcaa chr12:109726520-10972660 11 2.81e-05 TGGGCTTGTG ACAGACAT TGCTAATCTA chr7:132500633-132500713 11 2.81e-05 TAAgccagtg acagacat cactaatcaa chr8:19202644-19202724 32 2.81e-05 tgcccctggg acagacat gactaatcaa chr5:34530920-34531000 30 2.81e-05 cacacccaag acagacat tactaattga chr19:16427590-16427670 21 2.81e-05 CCTGTTAGTG ACAGACAT CACCAGTCAA chr10:63584920-63585000 53 2.81e-05 aatgtctgcc acagacat gCAGCACAGG chr9:135026657-135026737 21 2.81e-05 CCCCATCCAG ACAGACAT GACGAATCCA chr14:89592963-89593043 39 2.81e-05 tattcctgtg acagacat taatagtcaa chr16:9531102-9531182 3 2.81e-05 tg acagacat cactaatcaa chr9:126400648-126400728 42 2.81e-05 catatctgtg acagacat tactaactga chr12:110140372-11014045 45 4.56e-05 cttgcccact gcaggcat tgctaatcgg chr19:8578590-8578670 18 4.56e-05 GGGGCTATGG GCAGGCAT GGACTGGGAA chr3:52095708-52095788 54 4.56e-05 acccttccaa gcaggcat gaccagctga chr17:81023831-81023911 6 4.56e-05 agccg gcaggcat gaccaatgga chr20:22454132-22454212 27 5.89e-05 TTCACACCTG GAAGACAT CACTAGTCAA chr5:170904283-170904363 7 5.89e-05 cccata gaagacat gactaatcga chr1:156721634-156721714 53 8.87e-05 GCGTGGCGGC ACAGGCAT AAGGAGCCGA chr1:237108455-237108535 27 8.87e-05 catgcaaggg ccagacat cactaatcaa chr9:100967172-100967252 46 1.02e-04 taagcccatg gtagacat aagtaattga chr8:144535149-144535229 33 1.13e-04 aggatagacc aaagacat ctaccccaga chr9:119196758-119196838 65 1.29e-04 GGCAAGAGGA GCTGACAT CATAAATA chr16:87841854-87841934 66 1.46e-04 TGCCACTGGT GCAGACAG GGTGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:125837774-12583785 1.5e-05 14_[+3]_58 chr1:183952950-183953030 1.5e-05 26_[+3]_46 chr12:113338317-11333839 1.5e-05 44_[+3]_28 chr20:36832149-36832229 1.5e-05 8_[+3]_64 chr3:5304341-5304421 1.5e-05 31_[+3]_41 chr12:109980010-10998009 1.5e-05 22_[+3]_50 chr11:32418095-32418175 1.5e-05 9_[+3]_63 chr19:52218252-52218332 1.5e-05 37_[+3]_35 chr12:114197112-11419719 1.5e-05 34_[+3]_38 chr22:23857597-23857677 1.5e-05 48_[+3]_24 chr15:100023339-10002341 1.5e-05 40_[+3]_32 chr19:8139591-8139671 1.5e-05 25_[+3]_47 chr9:133053277-133053357 1.5e-05 34_[+3]_38 chr9:133295081-133295161 1.5e-05 53_[+3]_19 chr9:128239122-128239202 1.5e-05 12_[+3]_60 chr19:1935674-1935754 1.5e-05 9_[+3]_63 chr17:42700870-42700950 1.5e-05 31_[+3]_41 chr19:47509250-47509330 1.5e-05 19_[+3]_53 chr16:12253695-12253775 1.5e-05 27_[+3]_45 chr2:70758720-70758800 1.5e-05 8_[+3]_64 chr16:27930219-27930299 1.5e-05 32_[+3]_40 chr19:45175697-45175777 1.5e-05 22_[+3]_50 chr11:44799923-44800003 1.5e-05 8_[+3]_64 chr19:6141399-6141479 1.5e-05 35_[+3]_37 chr10:115282392-11528247 1.5e-05 36_[+3]_36 chr2:121544300-121544380 1.5e-05 32_[+3]_40 chr8:142366769-142366849 1.5e-05 3_[+3]_69 chr19:965288-965368 1.5e-05 43_[+3]_29 chr18:20147931-20148011 1.5e-05 11_[+3]_61 chr10:71567643-71567723 1.5e-05 15_[+3]_57 chr20:4042752-4042832 1.5e-05 9_[+3]_63 chr2:220246324-220246404 1.5e-05 53_[+3]_19 chr16:81588006-81588086 1.5e-05 36_[+3]_36 chr19:17015597-17015677 1.5e-05 18_[+3]_54 chr16:86701900-86701980 1.5e-05 11_[+3]_61 chr19:16847692-16847772 1.5e-05 2_[+3]_70 chr11:12561981-12562061 1.5e-05 18_[+3]_54 chr12:109726520-10972660 2.8e-05 10_[+3]_62 chr7:132500633-132500713 2.8e-05 10_[+3]_62 chr8:19202644-19202724 2.8e-05 31_[+3]_41 chr5:34530920-34531000 2.8e-05 29_[+3]_43 chr19:16427590-16427670 2.8e-05 20_[+3]_52 chr10:63584920-63585000 2.8e-05 52_[+3]_20 chr9:135026657-135026737 2.8e-05 20_[+3]_52 chr14:89592963-89593043 2.8e-05 38_[+3]_34 chr16:9531102-9531182 2.8e-05 2_[+3]_70 chr9:126400648-126400728 2.8e-05 41_[+3]_31 chr12:110140372-11014045 4.6e-05 44_[+3]_28 chr19:8578590-8578670 4.6e-05 17_[+3]_55 chr3:52095708-52095788 4.6e-05 53_[+3]_19 chr17:81023831-81023911 4.6e-05 5_[+3]_67 chr20:22454132-22454212 5.9e-05 26_[+3]_46 chr5:170904283-170904363 5.9e-05 6_[+3]_66 chr1:156721634-156721714 8.9e-05 52_[+3]_20 chr1:237108455-237108535 8.9e-05 26_[+3]_46 chr9:100967172-100967252 0.0001 45_[+3]_27 chr8:144535149-144535229 0.00011 32_[+3]_40 chr9:119196758-119196838 0.00013 64_[+3]_8 chr16:87841854-87841934 0.00015 65_[+3]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAGACAT width=8 seqs=59 chr12:125837774-12583785 ( 15) GCAGACAT 1 chr1:183952950-183953030 ( 27) GCAGACAT 1 chr12:113338317-11333839 ( 45) GCAGACAT 1 chr20:36832149-36832229 ( 9) GCAGACAT 1 chr3:5304341-5304421 ( 32) GCAGACAT 1 chr12:109980010-10998009 ( 23) GCAGACAT 1 chr11:32418095-32418175 ( 10) GCAGACAT 1 chr19:52218252-52218332 ( 38) GCAGACAT 1 chr12:114197112-11419719 ( 35) GCAGACAT 1 chr22:23857597-23857677 ( 49) GCAGACAT 1 chr15:100023339-10002341 ( 41) GCAGACAT 1 chr19:8139591-8139671 ( 26) GCAGACAT 1 chr9:133053277-133053357 ( 35) GCAGACAT 1 chr9:133295081-133295161 ( 54) GCAGACAT 1 chr9:128239122-128239202 ( 13) GCAGACAT 1 chr19:1935674-1935754 ( 10) GCAGACAT 1 chr17:42700870-42700950 ( 32) GCAGACAT 1 chr19:47509250-47509330 ( 20) GCAGACAT 1 chr16:12253695-12253775 ( 28) GCAGACAT 1 chr2:70758720-70758800 ( 9) GCAGACAT 1 chr16:27930219-27930299 ( 33) GCAGACAT 1 chr19:45175697-45175777 ( 23) GCAGACAT 1 chr11:44799923-44800003 ( 9) GCAGACAT 1 chr19:6141399-6141479 ( 36) GCAGACAT 1 chr10:115282392-11528247 ( 37) GCAGACAT 1 chr2:121544300-121544380 ( 33) GCAGACAT 1 chr8:142366769-142366849 ( 4) GCAGACAT 1 chr19:965288-965368 ( 44) GCAGACAT 1 chr18:20147931-20148011 ( 12) GCAGACAT 1 chr10:71567643-71567723 ( 16) GCAGACAT 1 chr20:4042752-4042832 ( 10) GCAGACAT 1 chr2:220246324-220246404 ( 54) GCAGACAT 1 chr16:81588006-81588086 ( 37) GCAGACAT 1 chr19:17015597-17015677 ( 19) GCAGACAT 1 chr16:86701900-86701980 ( 12) GCAGACAT 1 chr19:16847692-16847772 ( 3) GCAGACAT 1 chr11:12561981-12562061 ( 19) GCAGACAT 1 chr12:109726520-10972660 ( 11) ACAGACAT 1 chr7:132500633-132500713 ( 11) ACAGACAT 1 chr8:19202644-19202724 ( 32) ACAGACAT 1 chr5:34530920-34531000 ( 30) ACAGACAT 1 chr19:16427590-16427670 ( 21) ACAGACAT 1 chr10:63584920-63585000 ( 53) ACAGACAT 1 chr9:135026657-135026737 ( 21) ACAGACAT 1 chr14:89592963-89593043 ( 39) ACAGACAT 1 chr16:9531102-9531182 ( 3) ACAGACAT 1 chr9:126400648-126400728 ( 42) ACAGACAT 1 chr12:110140372-11014045 ( 45) GCAGGCAT 1 chr19:8578590-8578670 ( 18) GCAGGCAT 1 chr3:52095708-52095788 ( 54) GCAGGCAT 1 chr17:81023831-81023911 ( 6) GCAGGCAT 1 chr20:22454132-22454212 ( 27) GAAGACAT 1 chr5:170904283-170904363 ( 7) GAAGACAT 1 chr1:156721634-156721714 ( 53) ACAGGCAT 1 chr1:237108455-237108535 ( 27) CCAGACAT 1 chr9:100967172-100967252 ( 46) GTAGACAT 1 chr8:144535149-144535229 ( 33) AAAGACAT 1 chr9:119196758-119196838 ( 65) GCTGACAT 1 chr16:87841854-87841934 ( 66) GCAGACAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.92768 E= 4.0e-065 -19 -396 153 -1253 -219 182 -1253 -378 208 -1253 -1253 -378 -1253 -1253 188 -1253 198 -1253 -168 -1253 -1253 192 -1253 -1253 210 -1253 -1253 -1253 -1253 -1253 -399 208 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 59 E= 4.0e-065 0.203390 0.016949 0.779661 0.000000 0.050847 0.932203 0.000000 0.016949 0.983051 0.000000 0.000000 0.016949 0.000000 0.000000 1.000000 0.000000 0.915254 0.000000 0.084746 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.983051 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGACAT MEME-3 regular expression -------------------------------------------------------------------------------- [GA]CAGACAT -------------------------------------------------------------------------------- Time 11.09 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCACTC MEME-4 width = 8 sites = 26 llr = 232 E-value = 2.0e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :9::a::3 pos.-specific C a::a:8:6 probability G ::8::::: matrix T :12::2a1 bits 2.1 * * 1.9 * ** * 1.7 ** ** * 1.5 ** ** * Relative 1.3 ******* Entropy 1.1 ******* (12.9 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCACTC consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:125837774-12583785 44 1.67e-05 tgcagcactt cagcactc cctctgccat chr8:19202644-19202724 53 1.67e-05 taatcaattg cagcactc tctcctgatg chr22:23857597-23857677 70 1.67e-05 taattgatca cagcactc ttt chr15:100023339-10002341 62 1.67e-05 caatggattg cagcactc tttctcattg chr19:8139591-8139671 72 1.67e-05 taatcaatca cagcactc t chr19:45175697-45175777 63 1.67e-05 ttccaatgag cagcactc agagtccttG chr9:135026657-135026737 67 1.67e-05 TAGTCAATCA CAGCACTC TGTCCT chr17:41869118-41869198 9 1.67e-05 attgatca cagcactc tcctgttgag chr11:12561981-12562061 39 1.67e-05 ctaatcaacc cagcactc tccccATTGC chr17:42700870-42700950 53 3.13e-05 tagtggatcc cagcacta tctcccacta chr12:109362123-10936220 15 3.13e-05 tagtcaatca cagcacta tcccactgag chr2:70758720-70758800 30 3.13e-05 taattgatca cagcacta cttcctgctg chr3:64902854-64902934 50 4.60e-05 AACTCTATTT CAGCAttc atgttgcctt chr12:114197112-11419719 56 4.60e-05 taatcaatta cagcattc ttgctccata chr9:100967172-100967252 20 4.60e-05 ctgatcatgg cagcattc cctttgtcta chr6:10430444-10430524 28 6.04e-05 CTTCCTGTTT CATCACTC GAATCCATTA chr1:237108455-237108535 57 7.51e-05 gtagcactcC CAGCACTT GAGAAAGCCA chr11:44799923-44800003 30 7.51e-05 caatcaattg cagcactt ttgttggttc chrX:122293406-122293486 47 8.80e-05 ccctgcaaga cagcatta atctattcat chr11:32418095-32418175 67 1.01e-04 gctctaagat catcacta ctgagc chr19:15537468-15537548 3 1.01e-04 GA CATCACTA ATGGATCCCC chr19:17015597-17015677 65 1.01e-04 TGGACACAGA CATCACTA GTCAATAG chr16:27930219-27930299 8 1.13e-04 GATGATT CATCAttc ccgttccttt chr7:129076321-129076401 5 1.30e-04 GCAG CTGCACTC TTCATGCCTG chr16:12253695-12253775 49 1.30e-04 taatcaatca ctgcactc tttgtagccc chr5:34530920-34531000 51 1.43e-04 taattgatca cagcattt tagcccagat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:125837774-12583785 1.7e-05 43_[+4]_29 chr8:19202644-19202724 1.7e-05 52_[+4]_20 chr22:23857597-23857677 1.7e-05 69_[+4]_3 chr15:100023339-10002341 1.7e-05 61_[+4]_11 chr19:8139591-8139671 1.7e-05 71_[+4]_1 chr19:45175697-45175777 1.7e-05 62_[+4]_10 chr9:135026657-135026737 1.7e-05 66_[+4]_6 chr17:41869118-41869198 1.7e-05 8_[+4]_64 chr11:12561981-12562061 1.7e-05 38_[+4]_34 chr17:42700870-42700950 3.1e-05 52_[+4]_20 chr12:109362123-10936220 3.1e-05 14_[+4]_58 chr2:70758720-70758800 3.1e-05 29_[+4]_43 chr3:64902854-64902934 4.6e-05 49_[+4]_23 chr12:114197112-11419719 4.6e-05 55_[+4]_17 chr9:100967172-100967252 4.6e-05 19_[+4]_53 chr6:10430444-10430524 6e-05 27_[+4]_45 chr1:237108455-237108535 7.5e-05 56_[+4]_16 chr11:44799923-44800003 7.5e-05 29_[+4]_43 chrX:122293406-122293486 8.8e-05 46_[+4]_26 chr11:32418095-32418175 0.0001 66_[+4]_6 chr19:15537468-15537548 0.0001 2_[+4]_70 chr19:17015597-17015677 0.0001 64_[+4]_8 chr16:27930219-27930299 0.00011 7_[+4]_65 chr7:129076321-129076401 0.00013 4_[+4]_68 chr16:12253695-12253775 0.00013 48_[+4]_24 chr5:34530920-34531000 0.00014 50_[+4]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCACTC width=8 seqs=26 chr12:125837774-12583785 ( 44) CAGCACTC 1 chr8:19202644-19202724 ( 53) CAGCACTC 1 chr22:23857597-23857677 ( 70) CAGCACTC 1 chr15:100023339-10002341 ( 62) CAGCACTC 1 chr19:8139591-8139671 ( 72) CAGCACTC 1 chr19:45175697-45175777 ( 63) CAGCACTC 1 chr9:135026657-135026737 ( 67) CAGCACTC 1 chr17:41869118-41869198 ( 9) CAGCACTC 1 chr11:12561981-12562061 ( 39) CAGCACTC 1 chr17:42700870-42700950 ( 53) CAGCACTA 1 chr12:109362123-10936220 ( 15) CAGCACTA 1 chr2:70758720-70758800 ( 30) CAGCACTA 1 chr3:64902854-64902934 ( 50) CAGCATTC 1 chr12:114197112-11419719 ( 56) CAGCATTC 1 chr9:100967172-100967252 ( 20) CAGCATTC 1 chr6:10430444-10430524 ( 28) CATCACTC 1 chr1:237108455-237108535 ( 57) CAGCACTT 1 chr11:44799923-44800003 ( 30) CAGCACTT 1 chrX:122293406-122293486 ( 47) CAGCATTA 1 chr11:32418095-32418175 ( 67) CATCACTA 1 chr19:15537468-15537548 ( 3) CATCACTA 1 chr19:17015597-17015677 ( 65) CATCACTA 1 chr16:27930219-27930299 ( 8) CATCATTC 1 chr7:129076321-129076401 ( 5) CTGCACTC 1 chr16:12253695-12253775 ( 49) CTGCACTC 1 chr5:34530920-34531000 ( 51) CAGCATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.6186 E= 2.0e-002 -1134 192 -1134 -1134 199 -1134 -1134 -160 -1134 -1134 158 -27 -1134 192 -1134 -1134 210 -1134 -1134 -1134 -1134 154 -1134 -1 -1134 -1134 -1134 210 21 122 -1134 -101 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 2.0e-002 0.000000 1.000000 0.000000 0.000000 0.923077 0.000000 0.000000 0.076923 0.000000 0.000000 0.807692 0.192308 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.769231 0.000000 0.230769 0.000000 0.000000 0.000000 1.000000 0.269231 0.615385 0.000000 0.115385 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCACTC MEME-4 regular expression -------------------------------------------------------------------------------- CAGCA[CT]T[CA] -------------------------------------------------------------------------------- Time 13.99 secs. ******************************************************************************** ******************************************************************************** MOTIF TCKGSGCT MEME-5 width = 8 sites = 21 llr = 200 E-value = 3.9e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :a::6:a: probability G ::5a4a:: matrix T a:5::::a bits 2.1 * * 1.9 ** * *** 1.7 ** * *** 1.5 ** * *** Relative 1.3 ** * *** Entropy 1.1 **** *** (13.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTGCGCT consensus G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:18118433-18118513 57 1.71e-05 CGGCTGGGGC TCTGCGCT CGAGGGGTCG chr2:44396826-44396906 23 1.71e-05 TCTGCCCTAC TCTGCGCT CCACTTCACT chr22:35653390-35653470 50 1.71e-05 GGAGCCCGAG TCTGCGCT CTGGGCTCGA chr9:136890492-136890572 41 1.71e-05 CTGCCCAGCC TCTGCGCT CGGCTCGCCA chr16:68279068-68279148 16 5.45e-05 ATCGATGCGC TCGGCGCT CAGCGTGGTC chr1:12290000-12290080 25 5.45e-05 CCTCGATAAC TCGGCGCT CGGCTGGCCA chr16:84907896-84907976 34 5.45e-05 gaggcctcca tctgggct tagtggaaaa chr6:138026623-138026703 44 5.45e-05 GGGAGGGGGC TCTGGGCT CCACTTGTCT chrX:48455825-48455905 39 5.45e-05 ATCGATTCGC TCTGGGCT CGGCAGTTCT chr7:129076321-129076401 52 5.45e-05 ATCATCTCTA TCTGGGCT CATTGCCTGC chr16:54964413-54964493 27 5.45e-05 TTGGAAGAGA TCGGCGCT CCTGGGATGT chr3:39149094-39149174 23 5.45e-05 ACTCGCTCTC TCGGCGCT CGATTCCTGC chr2:209130810-209130890 40 5.45e-05 GACGACTCGA TCTGGGCT GGACTCCTTC chr16:27214777-27214857 17 5.45e-05 CATCGATCAC TCGGCGCT CCTCCAGGCA chr15:63413886-63413966 41 5.45e-05 CTCGATGCGA TCGGCGCT CGGGTAGTCA chr12:56401110-56401190 8 5.45e-05 GAATCTT TCGGCGCT CGGCTACTCT chr6:157117108-157117188 45 5.45e-05 GTGGGAAAGC TCGGCGCT GCTCTGCTCA chr11:12009073-12009153 30 5.45e-05 gctgaggcta tctgggct cataaggaaa chr9:132181926-132182006 14 5.45e-05 tgagactaca tctgggct tacaggaaga chr7:44788319-44788399 44 7.49e-05 gagcgccggc TCGGGGCT CTGCTGCTCT chr21:16437274-16437354 26 7.49e-05 CCTCCCGAGT TCGGGGCT CTGCTGCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:18118433-18118513 1.7e-05 56_[+5]_16 chr2:44396826-44396906 1.7e-05 22_[+5]_50 chr22:35653390-35653470 1.7e-05 49_[+5]_23 chr9:136890492-136890572 1.7e-05 40_[+5]_32 chr16:68279068-68279148 5.5e-05 15_[+5]_57 chr1:12290000-12290080 5.5e-05 24_[+5]_48 chr16:84907896-84907976 5.5e-05 33_[+5]_39 chr6:138026623-138026703 5.5e-05 43_[+5]_29 chrX:48455825-48455905 5.5e-05 38_[+5]_34 chr7:129076321-129076401 5.5e-05 51_[+5]_21 chr16:54964413-54964493 5.5e-05 26_[+5]_46 chr3:39149094-39149174 5.5e-05 22_[+5]_50 chr2:209130810-209130890 5.5e-05 39_[+5]_33 chr16:27214777-27214857 5.5e-05 16_[+5]_56 chr15:63413886-63413966 5.5e-05 40_[+5]_32 chr12:56401110-56401190 5.5e-05 7_[+5]_65 chr6:157117108-157117188 5.5e-05 44_[+5]_28 chr11:12009073-12009153 5.5e-05 29_[+5]_43 chr9:132181926-132182006 5.5e-05 13_[+5]_59 chr7:44788319-44788399 7.5e-05 43_[+5]_29 chr21:16437274-16437354 7.5e-05 25_[+5]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCKGSGCT width=8 seqs=21 chr20:18118433-18118513 ( 57) TCTGCGCT 1 chr2:44396826-44396906 ( 23) TCTGCGCT 1 chr22:35653390-35653470 ( 50) TCTGCGCT 1 chr9:136890492-136890572 ( 41) TCTGCGCT 1 chr16:68279068-68279148 ( 16) TCGGCGCT 1 chr1:12290000-12290080 ( 25) TCGGCGCT 1 chr16:84907896-84907976 ( 34) TCTGGGCT 1 chr6:138026623-138026703 ( 44) TCTGGGCT 1 chrX:48455825-48455905 ( 39) TCTGGGCT 1 chr7:129076321-129076401 ( 52) TCTGGGCT 1 chr16:54964413-54964493 ( 27) TCGGCGCT 1 chr3:39149094-39149174 ( 23) TCGGCGCT 1 chr2:209130810-209130890 ( 40) TCTGGGCT 1 chr16:27214777-27214857 ( 17) TCGGCGCT 1 chr15:63413886-63413966 ( 41) TCGGCGCT 1 chr12:56401110-56401190 ( 8) TCGGCGCT 1 chr6:157117108-157117188 ( 45) TCGGCGCT 1 chr11:12009073-12009153 ( 30) TCTGGGCT 1 chr9:132181926-132182006 ( 14) TCTGGGCT 1 chr7:44788319-44788399 ( 44) TCGGGGCT 1 chr21:16437274-16437354 ( 26) TCGGGGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.7488 E= 3.9e-003 -1104 -1104 -1104 210 -1104 192 -1104 -1104 -1104 -1104 81 117 -1104 -1104 188 -1104 -1104 111 66 -1104 -1104 -1104 188 -1104 -1104 192 -1104 -1104 -1104 -1104 -1104 210 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 3.9e-003 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.476190 0.523810 0.000000 0.000000 1.000000 0.000000 0.000000 0.571429 0.428571 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCKGSGCT MEME-5 regular expression -------------------------------------------------------------------------------- TC[TG]G[CG]GCT -------------------------------------------------------------------------------- Time 16.85 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:12561981-12562061 1.34e-05 18_[+3(1.51e-05)]_12_[+4(1.67e-05)]_\ 34 chr12:124972480-12497256 2.71e-02 28_[+1(6.26e-05)]_44 chr21:16437274-16437354 1.69e-03 25_[+5(7.49e-05)]_8_[+1(1.51e-05)]_\ 31 chr10:64603512-64603592 4.67e-04 54_[+2(3.14e-05)]_3_[+1(6.26e-05)]_\ 7 chr5:65104810-65104890 6.31e-02 80 chr7:5607605-5607685 2.84e-03 50_[+1(1.51e-05)]_22 chr19:16847692-16847772 2.82e-05 2_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 30_[+3(8.87e-05)]_19 chr2:191395234-191395314 6.33e-01 80 chr22:36841506-36841586 2.09e-03 33_[+1(1.51e-05)]_39 chr1:169083257-169083337 6.79e-01 80 chr8:134340275-134340355 7.72e-01 80 chr12:110233017-11023309 4.40e-03 21_[+3(1.51e-05)]_51 chr22:36475208-36475288 1.64e-04 35_[+1(1.51e-05)]_37 chr12:113748452-11374853 4.85e-02 80 chr15:67247639-67247719 7.97e-03 67_[+2(1.14e-05)]_5 chr2:168799378-168799458 8.69e-04 30_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 31 chr11:64765783-64765863 2.65e-04 25_[+1(1.51e-05)]_9_[+2(1.14e-05)]_\ 3_[+1(9.32e-05)]_19 chr9:5630340-5630420 1.50e-01 80 chr9:126400648-126400728 1.15e-03 41_[+3(2.81e-05)]_31 chr20:35028174-35028254 7.73e-02 22_[+1(1.51e-05)]_50 chr16:86701900-86701980 5.81e-05 11_[+3(1.51e-05)]_61 chr9:132181926-132182006 1.57e-05 13_[+5(5.45e-05)]_20_[+2(2.13e-05)]_\ 3_[+1(1.51e-05)]_20 chr20:34064271-34064351 1.50e-02 80 chr11:12009073-12009153 1.59e-05 29_[+5(5.45e-05)]_20_[+2(3.14e-05)]_\ 3_[+1(1.51e-05)]_4 chr14:91848566-91848646 3.46e-02 80 chr6:157117108-157117188 9.68e-03 21_[+1(9.32e-05)]_15_[+5(5.45e-05)]_\ 9_[+1(9.32e-05)]_11 chr16:9531102-9531182 1.98e-04 2_[+3(2.81e-05)]_5_[+2(7.75e-05)]_\ 57 chr19:5358358-5358438 4.96e-03 67_[+2(3.14e-05)]_5 chr14:89592963-89593043 5.27e-04 38_[+3(2.81e-05)]_34 chr4:71587493-71587573 3.53e-01 80 chr19:17015597-17015677 2.01e-04 18_[+3(1.51e-05)]_33_[+3(2.81e-05)]_\ 13 chr19:50170914-50170994 7.85e-03 35_[+1(4.55e-05)]_37 chr16:81588006-81588086 3.03e-05 36_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 23 chr2:220246324-220246404 4.70e-05 2_[+3(8.87e-05)]_43_[+3(1.51e-05)]_\ 19 chr8:144535149-144535229 2.19e-01 80 chr15:68285406-68285486 7.84e-03 3_[+1(9.32e-05)]_48_[+1(1.51e-05)]_\ 13 chr5:170904283-170904363 5.44e-03 6_[+3(5.89e-05)]_66 chr10:73104800-73104880 7.52e-05 37_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 24 chr20:55753921-55754001 1.66e-02 11_[+1(4.55e-05)]_33_[+1(4.55e-05)]_\ 20 chr17:81023831-81023911 2.63e-03 5_[+3(4.56e-05)]_67 chr19:8991684-8991764 1.64e-04 41_[+1(1.51e-05)]_13_[+2(2.13e-05)]_\ 10 chr5:89829763-89829843 8.46e-01 80 chr15:68974880-68974960 1.29e-03 72_[+1(9.32e-05)] chr1:38706441-38706521 1.12e-03 61_[+1(1.51e-05)]_11 chr20:4042752-4042832 1.84e-03 9_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 50 chr7:44788319-44788399 2.67e-01 43_[+5(7.49e-05)]_29 chr19:54448872-54448952 4.29e-03 19_[+1(6.26e-05)]_18_[+1(6.26e-05)]_\ 27 chr10:71567643-71567723 8.80e-04 15_[+3(1.51e-05)]_57 chr17:41869118-41869198 4.06e-03 [+2(8.90e-05)]_[+4(1.67e-05)]_64 chr20:33103361-33103441 7.80e-02 80 chr19:15537468-15537548 1.35e-03 61_[+2(5.77e-05)]_11 chr18:20147931-20148011 4.88e-03 11_[+3(1.51e-05)]_13_[+3(8.87e-05)]_\ 32_[+3(2.81e-05)] chr4:6988858-6988938 4.06e-02 80 chr16:21732031-21732111 4.16e-01 80 chr19:965288-965368 7.63e-05 43_[+3(1.51e-05)]_5_[+2(8.90e-05)]_\ 16 chrX:122293406-122293486 1.26e-02 46_[+4(8.80e-05)]_26 chr8:27381849-27381929 3.49e-03 80 chr19:36313608-36313688 2.01e-02 80 chr9:133263479-133263559 2.59e-05 44_[+2(1.14e-05)]_3_[+1(1.51e-05)]_\ 17 chr22:37521364-37521444 1.20e-03 31_[+1(1.51e-05)]_14_[+2(3.14e-05)]_\ 3_[+1(1.51e-05)]_8 chr22:37397203-37397283 1.83e-03 54_[+1(1.51e-05)]_18 chr8:142366769-142366849 2.86e-03 3_[+3(1.51e-05)]_69 chr10:50587773-50587853 9.10e-03 69_[+1(3.22e-05)]_3 chr19:19328090-19328170 3.55e-04 22_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 39 chr9:116986259-116986339 5.52e-03 48_[+1(1.51e-05)]_24 chr2:121544300-121544380 1.21e-04 32_[+3(1.51e-05)]_40 chr10:14195856-14195936 2.52e-01 80 chr2:119542614-119542694 4.52e-03 68_[+1(3.22e-05)]_4 chr10:115282392-11528247 5.07e-06 36_[+3(1.51e-05)]_5_[+2(1.14e-05)]_\ 23 chr11:3203135-3203215 3.24e-01 80 chr17:27388274-27388354 4.82e-01 80 chr9:131945827-131945907 1.19e-03 45_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 16 chr9:95826868-95826948 3.20e-01 80 chr7:76896627-76896707 9.19e-04 49_[+1(1.51e-05)]_23 chr19:48606788-48606868 6.70e-05 49_[+2(1.14e-05)]_3_[+1(1.51e-05)]_\ 12 chr8:124429369-124429449 2.65e-01 80 chr3:141747468-141747548 6.18e-01 80 chr19:6141399-6141479 1.01e-02 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chr15:31195992-31196072 2.82e-03 6_[+2(4.44e-05)]_66 chr1:237108455-237108535 2.49e-04 26_[+3(8.87e-05)]_22_[+4(7.51e-05)]_\ 16 chr19:45175697-45175777 7.53e-05 22_[+3(1.51e-05)]_32_[+4(1.67e-05)]_\ 10 chr19:16427590-16427670 3.35e-03 20_[+3(2.81e-05)]_20_[+3(2.81e-05)]_\ 24 chr16:27930219-27930299 4.01e-05 32_[+3(1.51e-05)]_5_[+2(4.44e-05)]_\ 27 chr7:4946448-4946528 9.11e-03 80 chr9:136890492-136890572 2.09e-04 40_[+5(1.71e-05)]_32 chr3:52095708-52095788 2.06e-02 53_[+3(4.56e-05)]_19 chr11:45939729-45939809 8.56e-01 80 chr2:70758720-70758800 5.09e-06 8_[+3(1.51e-05)]_5_[+2(8.90e-05)]_\ [+4(3.13e-05)]_43 chr11:919191-919271 2.23e-01 80 chr11:118401845-11840192 4.90e-02 4_[+2(5.77e-05)]_68 chr1:233293153-233293233 2.38e-03 29_[+1(1.51e-05)]_43 chr12:109362123-10936220 2.76e-03 14_[+4(3.13e-05)]_58 chr1:46972412-46972492 3.77e-01 80 chr1:178062785-178062865 1.60e-01 80 chr11:65676913-65676993 1.70e-03 67_[+2(1.14e-05)]_5 chr19:13228941-13229021 3.21e-01 80 chr19:17647911-17647991 5.93e-04 57_[+1(1.51e-05)]_15 chr16:12253695-12253775 8.70e-05 27_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 32 chr1:162602720-162602800 3.61e-01 80 chr4:74318986-74319066 3.65e-01 80 chr19:47509250-47509330 4.97e-04 19_[+3(1.51e-05)]_53 chr16:12897780-12897860 1.36e-01 80 chr16:87841854-87841934 6.01e-05 39_[+2(5.77e-05)]_3_[+1(1.51e-05)]_\ 22 chr17:58213096-58213176 3.53e-01 80 chr12:25403877-25403957 4.40e-02 80 chr6:139736688-139736768 6.05e-01 80 chr17:62340750-62340830 1.59e-01 80 chr16:27214777-27214857 9.08e-04 7_[+2(4.44e-05)]_1_[+5(5.45e-05)]_\ 56 chr19:761788-761868 2.33e-03 41_[+1(1.51e-05)]_31 chr1:24658927-24659007 4.06e-03 80 chr9:113091193-113091273 6.73e-03 54_[+2(3.14e-05)]_18 chr14:66974561-66974641 2.84e-01 80 chr16:88371913-88371993 1.26e-03 27_[+1(1.51e-05)]_45 chr3:138313108-138313188 9.53e-01 80 chr17:42700870-42700950 1.36e-03 31_[+3(1.51e-05)]_13_[+4(3.13e-05)]_\ 20 chr5:173104415-173104495 2.16e-02 71_[+1(1.51e-05)]_1 chr20:562240-562320 5.57e-02 80 chr9:133373801-133373881 1.34e-02 80 chr5:53813434-53813514 7.16e-01 80 chr19:1935674-1935754 6.70e-03 9_[+3(1.51e-05)]_47_[+3(1.51e-05)]_\ 8 chr8:18712497-18712577 4.74e-01 80 chr9:128239122-128239202 1.27e-03 12_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 47 chr7:92412308-92412388 1.79e-01 80 chr1:23219923-23220003 1.41e-03 56_[+1(6.26e-05)]_16 chr17:34979889-34979969 7.59e-03 12_[+5(5.45e-05)]_60 chr22:35653390-35653470 3.14e-02 6_[+5(5.45e-05)]_35_[+5(1.71e-05)]_\ 23 chr12:117080651-11708073 1.37e-03 31_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 30 chr9:133295081-133295161 1.69e-04 53_[+3(1.51e-05)]_19 chr2:209130810-209130890 1.72e-02 39_[+5(5.45e-05)]_33 chr12:69724960-69725040 3.80e-01 80 chr9:133053277-133053357 1.38e-04 34_[+3(1.51e-05)]_5_[+2(7.75e-05)]_\ 25 chr19:33071988-33072068 6.26e-02 80 chr5:34530920-34531000 2.01e-04 29_[+3(2.81e-05)]_5_[+2(8.90e-05)]_\ 30 chr19:31841731-31841811 9.10e-02 80 chr1:154767257-154767337 2.36e-03 26_[+2(5.77e-05)]_3_[+1(4.55e-05)]_\ 35 chr11:10737778-10737858 5.62e-02 80 chr14:69618474-69618554 4.93e-02 80 chr9:100967172-100967252 3.32e-04 19_[+4(4.60e-05)]_31_[+2(8.90e-05)]_\ 14 chr6:37321777-37321857 6.04e-02 80 chr19:8139591-8139671 3.18e-05 25_[+3(1.51e-05)]_17_[+3(1.51e-05)]_\ 5_[+2(7.75e-05)]_[+4(1.67e-05)]_1 chr2:97222807-97222887 4.47e-05 30_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 31 chr19:15543587-15543667 8.42e-01 80 chr17:34842360-34842440 2.90e-01 80 chr22:31365383-31365463 9.40e-02 80 chr15:100023339-10002341 5.64e-06 40_[+3(1.51e-05)]_13_[+4(1.67e-05)]_\ 11 chr1:10448277-10448357 1.75e-01 80 chr3:69193036-69193116 4.78e-02 7_[+2(7.75e-05)]_65 chr1:48109991-48110071 4.78e-02 80 chr16:56228369-56228449 5.52e-01 80 chr3:39149094-39149174 6.19e-03 22_[+5(5.45e-05)]_50 chr1:114620972-114621052 4.09e-01 80 chr3:10803945-10804025 1.46e-03 39_[+2(1.14e-05)]_3_[+1(3.22e-05)]_\ 22 chr16:54964413-54964493 3.89e-02 26_[+5(5.45e-05)]_46 chr1:53480519-53480599 2.00e-02 80 chr20:22454132-22454212 4.02e-03 26_[+3(5.89e-05)]_46 chr5:171986056-171986136 1.66e-02 59_[+1(3.22e-05)]_13 chr17:80376459-80376539 2.83e-01 80 chr7:129076321-129076401 8.22e-04 51_[+5(5.45e-05)]_21 chr2:86431760-86431840 3.69e-02 80 chrX:54466730-54466810 2.57e-01 80 chr10:17755358-17755438 1.99e-01 80 chr7:40098389-40098469 8.33e-03 80 chrX:48455825-48455905 2.55e-04 38_[+5(5.45e-05)]_34 chr22:23857597-23857677 6.24e-06 48_[+3(1.51e-05)]_5_[+2(8.90e-05)]_\ [+4(1.67e-05)]_3 chr17:42588831-42588911 5.06e-01 80 chr9:139839133-139839213 2.16e-01 80 chr12:133136423-13313650 2.84e-02 58_[+5(7.49e-05)]_14 chr6:20689107-20689187 1.18e-01 80 chr12:114197112-11419719 8.10e-06 34_[+3(1.51e-05)]_5_[+2(2.13e-05)]_\ [+4(4.60e-05)]_17 chr11:67236796-67236876 9.54e-01 80 chr11:69055580-69055660 9.47e-05 26_[+2(2.13e-05)]_3_[+1(1.51e-05)]_\ 35 chr12:118810821-11881090 4.50e-01 80 chr19:52218252-52218332 1.52e-05 37_[+3(1.51e-05)]_35 chr6:138026623-138026703 6.89e-03 43_[+5(5.45e-05)]_29 chr17:1933354-1933434 1.25e-05 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70_[+1(9.32e-05)]_2 chr10:134385554-13438563 8.70e-02 46_[+1(7.81e-05)]_26 chr20:36832149-36832229 9.86e-05 8_[+3(1.51e-05)]_64 chr2:68353881-68353961 2.29e-04 24_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 37 chr17:36828659-36828739 1.73e-01 80 chr14:31889894-31889974 5.43e-01 80 chr2:203776375-203776455 2.52e-02 70_[+2(1.14e-05)]_2 chr12:113338317-11333839 1.74e-04 44_[+3(1.51e-05)]_28 chr11:46615615-46615695 5.72e-01 80 chr17:80606362-80606442 9.45e-01 80 chr1:27127092-27127172 5.00e-01 80 chr3:119384047-119384127 3.43e-01 80 chr2:44396826-44396906 4.21e-03 22_[+5(1.71e-05)]_50 chr22:23419246-23419326 1.79e-03 36_[+1(1.51e-05)]_36 chr1:183952950-183953030 3.16e-04 26_[+3(1.51e-05)]_46 chr20:18118433-18118513 1.98e-03 56_[+5(1.71e-05)]_16 chr2:121824279-121824359 5.06e-05 26_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 35 chr1:156721634-156721714 1.39e-01 52_[+3(8.87e-05)]_20 chr6:42199920-42200000 4.54e-04 31_[+2(3.14e-05)]_3_[+1(1.51e-05)]_\ 30 chr2:204103589-204103669 7.83e-02 80 chr18:44498112-44498192 7.35e-01 80 chr2:232794883-232794963 5.52e-01 80 chr1:222886566-222886646 4.61e-02 49_[+1(9.32e-05)]_23 chr1:10534925-10535005 8.04e-01 80 chr16:2255422-2255502 5.11e-02 80 chr2:61244697-61244777 3.77e-01 80 chr16:68279068-68279148 5.72e-02 15_[+5(5.45e-05)]_57 chr6:10430444-10430524 3.55e-03 27_[+4(6.04e-05)]_45 chr8:30013821-30013901 7.98e-01 80 chr8:19202644-19202724 4.86e-05 31_[+3(2.81e-05)]_13_[+4(1.67e-05)]_\ 20 chr19:8578590-8578670 5.31e-03 17_[+3(4.56e-05)]_55 chr12:110140372-11014045 2.28e-03 44_[+3(4.56e-05)]_28 chr7:132500633-132500713 1.11e-03 10_[+3(2.81e-05)]_62 chr12:109726520-10972660 2.68e-03 10_[+3(2.81e-05)]_62 chr12:125837774-12583785 4.20e-05 14_[+3(1.51e-05)]_13_[+4(7.51e-05)]_\ [+4(1.67e-05)]_29 chr6:32098164-32098244 3.18e-01 80 chr11:102980012-10298009 3.58e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n04.farnam.hpc.yale.internal ********************************************************************************