******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/YY1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:52552603-52552683 1.0000 80 chr1:161190640-161190720 1.0000 80 chr3:119187741-119187821 1.0000 80 chr11:67980734-67980814 1.0000 80 chr9:115818987-115819067 1.0000 80 chr8:120885975-120886055 1.0000 80 chr10:104678259-10467833 1.0000 80 chr19:52511480-52511560 1.0000 80 chr15:36871733-36871813 1.0000 80 chr5:176981593-176981673 1.0000 80 chr19:7598920-7599000 1.0000 80 chr22:38577998-38578078 1.0000 80 chrX:47225775-47225855 1.0000 80 chr22:50312049-50312129 1.0000 80 chr10:104220987-10422106 1.0000 80 chr20:35374592-35374672 1.0000 80 chr6:6737584-6737664 1.0000 80 chr11:73490508-73490588 1.0000 80 chr9:131873614-131873694 1.0000 80 chr19:12886440-12886520 1.0000 80 chr19:49127369-49127449 1.0000 80 chr1:90460391-90460471 1.0000 80 chr10:99639063-99639143 1.0000 80 chrX:63615377-63615457 1.0000 80 chr10:104192355-10419243 1.0000 80 chr3:179065377-179065457 1.0000 80 chr17:4270071-4270151 1.0000 80 chr5:174905973-174906053 1.0000 80 chr2:31456841-31456921 1.0000 80 chr8:145515254-145515334 1.0000 80 chr10:99393276-99393356 1.0000 80 chr10:105127703-10512778 1.0000 80 chr17:65855-65935 1.0000 80 chr19:50321431-50321511 1.0000 80 chr1:43149947-43150027 1.0000 80 chr2:201728922-201729002 1.0000 80 chr1:154297867-154297947 1.0000 80 chr6:74363763-74363843 1.0000 80 chr10:123687579-12368765 1.0000 80 chr10:121632439-12163251 1.0000 80 chr9:32552290-32552370 1.0000 80 chr1:2457986-2458066 1.0000 80 chr16:30546254-30546334 1.0000 80 chr17:1359571-1359651 1.0000 80 chr3:53916186-53916266 1.0000 80 chr2:27357616-27357696 1.0000 80 chr16:68877420-68877500 1.0000 80 chr2:74055922-74056002 1.0000 80 chr12:72058010-72058090 1.0000 80 chr3:185655203-185655283 1.0000 80 chr11:10879301-10879381 1.0000 80 chr20:5730946-5731026 1.0000 80 chr6:33539144-33539224 1.0000 80 chr1:161129265-161129345 1.0000 80 chrX:30907499-30907579 1.0000 80 chrX:47342061-47342141 1.0000 80 chr2:242576748-242576828 1.0000 80 chrX:152127448-152127528 1.0000 80 chr1:35657726-35657806 1.0000 80 chr1:6685210-6685290 1.0000 80 chr22:38453150-38453230 1.0000 80 chr14:70234389-70234469 1.0000 80 chr17:42767076-42767156 1.0000 80 chrX:47696103-47696183 1.0000 80 chr3:19989237-19989317 1.0000 80 chrX:47180872-47180952 1.0000 80 chr12:110434195-11043427 1.0000 80 chr5:130506381-130506461 1.0000 80 chr11:67250486-67250566 1.0000 80 chr17:71189128-71189208 1.0000 80 chr13:50018078-50018158 1.0000 80 chr18:39535005-39535085 1.0000 80 chr2:28974975-28975055 1.0000 80 chrX:1021106-1021186 1.0000 80 chr19:13067981-13068061 1.0000 80 chr17:2415125-2415205 1.0000 80 chr10:121356148-12135622 1.0000 80 chr19:52408293-52408373 1.0000 80 chr11:33060868-33060948 1.0000 80 chr11:62477055-62477135 1.0000 80 chr19:37663730-37663810 1.0000 80 chr20:34329549-34329629 1.0000 80 chr19:52552118-52552198 1.0000 80 chr9:130477993-130478073 1.0000 80 chr15:69110525-69110605 1.0000 80 chr14:100706284-10070636 1.0000 80 chr10:70092221-70092301 1.0000 80 chr19:52430573-52430653 1.0000 80 chr18:54318376-54318456 1.0000 80 chr19:50316879-50316959 1.0000 80 chr5:134209961-134210041 1.0000 80 chr1:155179020-155179100 1.0000 80 chr15:93426025-93426105 1.0000 80 chrX:24168513-24168593 1.0000 80 chr9:139702364-139702444 1.0000 80 chr16:5558567-5558647 1.0000 80 chr19:56135880-56135960 1.0000 80 chr15:40674997-40675077 1.0000 80 chr16:19566853-19566933 1.0000 80 chr3:125314450-125314530 1.0000 80 chr7:152456684-152456764 1.0000 80 chr19:59070462-59070542 1.0000 80 chr18:23501755-23501835 1.0000 80 chr12:121148238-12114831 1.0000 80 chr22:24059540-24059620 1.0000 80 chr1:78245221-78245301 1.0000 80 chr4:186346872-186346952 1.0000 80 chr7:43909032-43909112 1.0000 80 chr12:117628214-11762829 1.0000 80 chr10:71267712-71267792 1.0000 80 chr2:62733016-62733096 1.0000 80 chr18:55297479-55297559 1.0000 80 chr11:64052909-64052989 1.0000 80 chr3:194991821-194991901 1.0000 80 chr7:149117-149197 1.0000 80 chr15:79165917-79165997 1.0000 80 chr1:155189474-155189554 1.0000 80 chr6:37467737-37467817 1.0000 80 chr3:56716881-56716961 1.0000 80 chr22:30820009-30820089 1.0000 80 chr11:107436390-10743647 1.0000 80 chr20:3762018-3762098 1.0000 80 chr2:64751252-64751332 1.0000 80 chr2:105654498-105654578 1.0000 80 chr12:101673874-10167395 1.0000 80 chr16:30773635-30773715 1.0000 80 chr8:145149994-145150074 1.0000 80 chr20:2821256-2821336 1.0000 80 chr16:29827280-29827360 1.0000 80 chr14:88459563-88459643 1.0000 80 chrX:77041662-77041742 1.0000 80 chr5:1799947-1800027 1.0000 80 chr5:133561206-133561286 1.0000 80 chr19:1021060-1021140 1.0000 80 chr11:34938165-34938245 1.0000 80 chr5:139682604-139682684 1.0000 80 chr12:14538184-14538264 1.0000 80 chr19:52490168-52490248 1.0000 80 chr12:124155640-12415572 1.0000 80 chr15:41836396-41836476 1.0000 80 chr5:170814466-170814546 1.0000 80 chr9:124855640-124855720 1.0000 80 chr20:10415753-10415833 1.0000 80 chr6:149364796-149364876 1.0000 80 chrX:153237007-153237087 1.0000 80 chr16:9057697-9057777 1.0000 80 chr8:95835477-95835557 1.0000 80 chr11:74459890-74459970 1.0000 80 chr6:41040162-41040242 1.0000 80 chr19:50379870-50379950 1.0000 80 chr9:123964109-123964189 1.0000 80 chr11:62414036-62414116 1.0000 80 chr14:103851694-10385177 1.0000 80 chr8:145748138-145748218 1.0000 80 chr19:38826380-38826460 1.0000 80 chr3:101396078-101396158 1.0000 80 chr3:51422426-51422506 1.0000 80 chr12:30848860-30848940 1.0000 80 chrX:152110189-152110269 1.0000 80 chr22:46067901-46067981 1.0000 80 chr11:119205202-11920528 1.0000 80 chr12:32908772-32908852 1.0000 80 chr9:101018092-101018172 1.0000 80 chr2:98612606-98612686 1.0000 80 chr3:122102010-122102090 1.0000 80 chr19:41870179-41870259 1.0000 80 chr16:57769199-57769279 1.0000 80 chr7:94139375-94139455 1.0000 80 chr2:74710098-74710178 1.0000 80 chr7:5553459-5553539 1.0000 80 chr9:139667919-139667999 1.0000 80 chr14:23298987-23299067 1.0000 80 chr7:156195075-156195155 1.0000 80 chr17:40021594-40021674 1.0000 80 chr9:133568968-133569048 1.0000 80 chr1:222791437-222791517 1.0000 80 chr16:5083869-5083949 1.0000 80 chr6:33168540-33168620 1.0000 80 chr1:27114325-27114405 1.0000 80 chr1:161719557-161719637 1.0000 80 chrX:54071041-54071121 1.0000 80 chr14:31494829-31494909 1.0000 80 chr2:48667716-48667796 1.0000 80 chr8:20054866-20054946 1.0000 80 chr19:19600093-19600173 1.0000 80 chr1:156163712-156163792 1.0000 80 chr16:1020922-1021002 1.0000 80 chr6:127588411-127588491 1.0000 80 chr11:124670247-12467032 1.0000 80 chr22:49448236-49448316 1.0000 80 chrX:48455837-48455917 1.0000 80 chr19:37019511-37019591 1.0000 80 chr8:6264137-6264217 1.0000 80 chr4:147443059-147443139 1.0000 80 chr5:134074093-134074173 1.0000 80 chr4:177116682-177116762 1.0000 80 chr17:4871072-4871152 1.0000 80 chr2:67624431-67624511 1.0000 80 chr1:46152177-46152257 1.0000 80 chr14:102606204-10260628 1.0000 80 chr18:55289097-55289177 1.0000 80 chrX:153236549-153236629 1.0000 80 chr21:47744314-47744394 1.0000 80 chr20:34042823-34042903 1.0000 80 chr1:97187329-97187409 1.0000 80 chr2:75873884-75873964 1.0000 80 chr1:161195803-161195883 1.0000 80 chr2:24583334-24583414 1.0000 80 chr7:74489575-74489655 1.0000 80 chr7:27200671-27200751 1.0000 80 chr20:40322141-40322221 1.0000 80 chr2:242255025-242255105 1.0000 80 chr1:160254889-160254969 1.0000 80 chr11:10830147-10830227 1.0000 80 chr10:120101783-12010186 1.0000 80 chr17:61904465-61904545 1.0000 80 chr17:74732606-74732686 1.0000 80 chr5:140937514-140937594 1.0000 80 chr11:45376918-45376998 1.0000 80 chr20:44563256-44563336 1.0000 80 chr11:66886724-66886804 1.0000 80 chr15:41624720-41624800 1.0000 80 chr10:38265585-38265665 1.0000 80 chr1:213189201-213189281 1.0000 80 chr17:3572080-3572160 1.0000 80 chr4:128554089-128554169 1.0000 80 chr3:66271410-66271490 1.0000 80 chr1:150849133-150849213 1.0000 80 chr11:695776-695856 1.0000 80 chrX:53710719-53710799 1.0000 80 chrX:48433232-48433312 1.0000 80 chr9:139137601-139137681 1.0000 80 chr15:93461228-93461308 1.0000 80 chr19:13044581-13044661 1.0000 80 chr18:9914588-9914668 1.0000 80 chr17:74099892-74099972 1.0000 80 chr2:73441364-73441444 1.0000 80 chr1:228270380-228270460 1.0000 80 chr19:10426632-10426712 1.0000 80 chr19:4007722-4007802 1.0000 80 chr1:111505920-111506000 1.0000 80 chr5:147763379-147763459 1.0000 80 chr11:73472418-73472498 1.0000 80 chr9:131084732-131084812 1.0000 80 chr1:223886059-223886139 1.0000 80 chr1:110089085-110089165 1.0000 80 chr15:40213194-40213274 1.0000 80 chr19:49990535-49990615 1.0000 80 chr19:8509854-8509934 1.0000 80 chr1:155658070-155658150 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_YY1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/YY1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.173 C 0.325 G 0.324 T 0.178 Background letter frequencies (from file dataset with add-one prior applied): A 0.174 C 0.325 G 0.324 T 0.178 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GCCATCTT MEME-1 width = 8 sites = 126 llr = 1289 E-value = 2.0e-229 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C :aa::6:: probability G a::::1:: matrix T ::::a2aa bits 2.5 ** * 2.3 ** ** 2.0 ** ** 1.8 ** ** Relative 1.5 ***** ** Entropy 1.3 ***** ** (14.8 bits) 1.0 ***** ** 0.8 ***** ** 0.5 ***** ** 0.3 ******** 0.0 -------- Multilevel GCCATCTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:40213194-40213274 35 1.09e-05 CGGGGAGGGC GCCATCTT GGCCCCGCGG chr1:111505920-111506000 32 1.09e-05 AAGAGCGTCG GCCATCTT GGTTTTCATC chr1:228270380-228270460 35 1.09e-05 CGTCAGAGCC GCCATCTT GTGGGAGCAA chr18:9914588-9914668 22 1.09e-05 cgccgccgcc gccATCTT GCGGTCCCGC chr19:13044581-13044661 14 1.09e-05 AGTGTGTACC GCCATCTT GAATGTGTCT chrX:48433232-48433312 12 1.09e-05 CGTGGCCGCC GCCATCTT GTTCTGCCGG chrX:53710719-53710799 36 1.09e-05 AGCCTCCGCC GCCATCTT AACAGCAGGC chr15:41624720-41624800 35 1.09e-05 CGGCTGAGCC GCCATCTT CCCGCAGCCG chr10:120101783-12010186 23 1.09e-05 TCGCCCAGCA GCCATCTT AGGACCCCGT chr1:160254889-160254969 21 1.09e-05 CTCAGCGGCG GCCATCTT GCTACCTCCG chr2:242255025-242255105 31 1.09e-05 GGGACAAGCC GCCATCTT GGTAAAGGAG chr7:74489575-74489655 33 1.09e-05 TCTGGGCGCC GCCATCTT GCGTGACCCT chr21:47744314-47744394 48 1.09e-05 CCTGGCCGCC GCCATCTT GAATCCGCCG chrX:153236549-153236629 70 1.09e-05 CCTGGGAGCC GCCATCTT GAG chr18:55289097-55289177 46 1.09e-05 CGCCGGGGCC GCCATCTT TGGTGAGGGC chr17:4871072-4871152 23 1.09e-05 CAGTAGGTCC GCCATCTT GGGAGTGACT chr19:37019511-37019591 54 1.09e-05 CAAGCCGGGC GCCATCTT GCTCATCGCG chrX:48455837-48455917 60 1.09e-05 ATAGCAGGCA GCCATCTT GCCTGGAGCC chr22:49448236-49448316 48 1.09e-05 GGAAGCCCCG GCCATCTT GGGAAGGGCC chr11:124670247-12467032 25 1.09e-05 ACAGGGCGCA GCCATCTT CCAAGCGGCC chr2:48667716-48667796 32 1.09e-05 GTTCCAGGTC GCCATCTT GGACCATGAG chrX:54071041-54071121 39 1.09e-05 CGGAGAAGCC GCCATCTT AGGCGAGGCA chr17:40021594-40021674 25 1.09e-05 tgccgcagcc gccATCTT GACGCCGCTG chr7:156195075-156195155 44 1.09e-05 cagctgtggc gccatctt gggtgtggcT chr9:101018092-101018172 30 1.09e-05 GCGCCAGTCA GCCATCTT TACTGAGGGC chr12:32908772-32908852 32 1.09e-05 GATGGGCGCC GCCATCTT GGTAGCGGCA chr14:103851694-10385177 50 1.09e-05 CCGAGGGGCG GCCATCTT GGCTCCGTGA chr11:62414036-62414116 31 1.09e-05 CGCTACCGCC GCCATCTT GTGCAGAGTT chrX:153237007-153237087 30 1.09e-05 CGTGGGAGCC GCCATCTT GAGACTAGCT chr6:149364796-149364876 35 1.09e-05 CCTGAGGCCG GCCATCTT GTTCAGAGCC chr15:41836396-41836476 45 1.09e-05 TCTGGGCGCC GCCATCTT GCCCCGCAGA chr12:14538184-14538264 19 1.09e-05 GCACATTGCA GCCATCTT AATTACACTT chr5:139682604-139682684 50 1.09e-05 CACGGGGGCG GCCATCTT GGTGCACTGT chr19:1021060-1021140 45 1.09e-05 GGCCGCCGCC GCCATCTT CCGCTTTCTC chr16:29827280-29827360 28 1.09e-05 CTTCCCGGTG GCCATCTT TACTGTGGGC chr22:30820009-30820089 35 1.09e-05 GTTGTCTTCC GCCATCTT TGATCAGGGC chr6:37467737-37467817 29 1.09e-05 TGCTGCCGTC GCCATCTT GTTGAGGGGC chr11:64052909-64052989 37 1.09e-05 gggcccgggg gccATCTT GGCTATGGGC chr12:117628214-11762829 43 1.09e-05 tgctgccgcc gccATCTT GTCCGCGTAC chr7:43909032-43909112 58 1.09e-05 CACGGAGGCC GCCATCTT GGGCCAAGCG chr4:186346872-186346952 34 1.09e-05 GCTCGCAGCT GCCATCTT GGACCCCGGC chr22:24059540-24059620 56 1.09e-05 GGTCGTCCGC GCCATCTT TGTTGAGGGC chr12:121148238-12114831 20 1.09e-05 GGAGGCGGCG GCCATCTT GGCGGCGGAG chr19:59070462-59070542 41 1.09e-05 GGAGTTAGTC GCCATCTT TGAGTGGGGC chr3:125314450-125314530 37 1.09e-05 AGCGTCTGGC GCCATCTT GGGTCAGGGC chr19:56135880-56135960 43 1.09e-05 GCGCGCAGCG GCCATCTT GTGCCCAAGC chr14:100706284-10070636 57 1.09e-05 GATGGGCGCC GCCATCTT CTTCGCCAGG chr19:52552118-52552198 40 1.09e-05 TCTGGGGGCG GCCATCTT TGAGTACGTG chr19:52408293-52408373 59 1.09e-05 TCTGGGCGCG GCCATCTT GGTAGATCTG chr17:2415125-2415205 48 1.09e-05 CCAGCGCGCC GCCATCTT GTGAAGCCAT chr19:13067981-13068061 41 1.09e-05 CACGGACGCC GCCATCTT GGCTGTGCGG chrX:1021106-1021186 52 1.09e-05 gtggccgtct gccatctt gggagTggcc chr12:110434195-11043427 52 1.09e-05 CTGCCTTGTC GCCATCTT GAGTGAGGGC chr17:42767076-42767156 41 1.09e-05 GCTGGGCGCC GCCATCTT GGGGTCAGGG chr1:6685210-6685290 33 1.09e-05 CGCCGCCGCC GCCATCTT TGTTGGGGGC chr1:35657726-35657806 54 1.09e-05 GGGGGCCGCC GCCATCTT AGGGGAGCCG chrX:47342061-47342141 48 1.09e-05 TACGGGAGCC GCCATCTT GGAAGGGCGG chr6:33539144-33539224 59 1.09e-05 CGCGGCGGCG GCCATCTT GGACTCGGGC chr11:10879301-10879381 33 1.09e-05 GCCCGCGACC GCCATCTT AGGCAGTTCC chr10:121632439-12163251 43 1.09e-05 cggcggcgcc gcCATCTT GGAGACGGGC chr10:123687579-12368765 57 1.09e-05 CGCCGCCCGC GCCATCTT GACCGAGGGC chr6:74363763-74363843 28 1.09e-05 CGCCCCCGCC GCCATCTT AGGTGTGGGC chr2:201728922-201729002 23 1.09e-05 CCGCCCAGCC GCCATCTT ACAGCTCCGC chr10:99393276-99393356 64 1.09e-05 CCGGCTCCAC GCCATCTT TGTGCGGGG chrX:63615377-63615457 46 1.09e-05 AGCCGTTCCC GCCATCTT GCTTCCTGGC chr10:99639063-99639143 38 1.09e-05 CCACCTGGGA GCCATCTT TGTTAAGGGC chr19:12886440-12886520 38 1.09e-05 CTCCAGCCCC GCCATCTT GGATCCGGGC chr20:35374592-35374672 62 1.09e-05 GGCCGGCGGC GCCATCTT TGATGTAGTT chr19:52511480-52511560 54 1.09e-05 CATGGGGGCC GCCATCTT TGAGTATCTG chr9:115818987-115819067 60 1.09e-05 CACGGGCGCG GCCATCTT GGCAAACACT chr3:119187741-119187821 60 1.09e-05 CGGCTCCCGG GCCATCTT TGTGCGGGGC chr19:52552603-52552683 36 1.09e-05 CATGGGGGCG GCCATCTT AGGGGACGTT chr1:110089085-110089165 69 1.69e-05 TTGCCTGGCA GCCATTTT GTTA chr1:223886059-223886139 58 1.69e-05 CCCAGGAGGC GCCATTTT ACCGTCATCA chr17:74099892-74099972 57 1.69e-05 CGGACCGACG GCCATTTT GAGCGTGGCT chr15:93461228-93461308 18 1.69e-05 AACCAGTTCG GCCATTTT GTAAGTTAGC chr17:61904465-61904545 50 1.69e-05 GAGGTTTTCC GCCATTTT GAGTGTGGCC chr11:10830147-10830227 59 1.69e-05 AGGGACGGCG GCCATTTT AGAGCGCTCC chr1:97187329-97187409 15 1.69e-05 GGCCCCAGCC GCCATTTT CTCGCCGCTT chr19:41870179-41870259 35 1.69e-05 AAAGGGTTCC GCCATTTT GGGCGTGGCT chr19:38826380-38826460 60 1.69e-05 AGTGTGGGCG GCCATTTT GAGACCGGGC chr8:95835477-95835557 38 1.69e-05 GGCCCGCGCC GCCATTTT GGATTGTGTG chr20:10415753-10415833 30 1.69e-05 CTGAACAGAG GCCATTTT TCTTTTGGGC chr5:170814466-170814546 29 1.69e-05 GGCTGCCGAC GCCATTTT GCAGGGTGGG chr5:133561206-133561286 32 1.69e-05 AGTGAACGGC GCCATTTT AGGCGGCGGC chrX:77041662-77041742 22 1.69e-05 CGCTGCCGCC GCCATTTT GTTGGGCCGA chr14:88459563-88459643 41 1.69e-05 CGCCGCCGCC GCCATTTT GAGTGCGGGT chr3:56716881-56716961 31 1.69e-05 CGCCGCCGCC GCCATTTT GTTGGGAGGA chr2:62733016-62733096 56 1.69e-05 AGGCGACATC GCCATTTT AGGTACGGGC chr10:70092221-70092301 35 1.69e-05 CTTGGCCTCC GCCATTTT GGGTACAGTG chr19:37663730-37663810 61 1.69e-05 CGCGTGGGCC GCCATTTT GAAAGCATAT chr14:70234389-70234469 4 1.69e-05 GCC GCCATTTT GTGGCCGCAG chr3:185655203-185655283 8 1.69e-05 CTTCTCC GCCATTTT GTGCCTCTGG chr2:27357616-27357696 40 1.69e-05 CACCGACTTC GCCATTTT TGTgcggggc chr1:2457986-2458066 36 1.69e-05 TCCACACTCC GCCATTTT GAAAGTGCCC chr17:4270071-4270151 2 1.69e-05 C GCCATTTT GGGAAGGTCG chr5:176981593-176981673 64 1.69e-05 GGCCGCCTGC GCCATTTT GAATAAGGT chr9:131084732-131084812 39 2.78e-05 CACGGGCGCC GCCATGTT CCACAGCCGG chr9:139137601-139137681 44 2.78e-05 cccggccgcc gccATGTT GGAAGTGCCG chr1:161719557-161719637 32 2.78e-05 TCTGGGCGCG GCCATGTT GGAGGCTCCG chr9:139667919-139667999 21 2.78e-05 ctcagaggca gccatgtt gaaaggaagc chr7:5553459-5553539 34 2.78e-05 CTAGGCGGCC GCCATGTT GAATGTGGCT chr9:124855640-124855720 53 2.78e-05 GGCAGCGGCG GCCATGTT GGAAGAGGGC chr19:52490168-52490248 60 2.78e-05 CCTGACGGCA GCCATGTT TGAAAATTGG chr11:107436390-10743647 54 2.78e-05 CCTGGGCGCG GCCATGTT GGAGAAAACT chr18:55297479-55297559 36 2.78e-05 CGCCGGCGCC GCCATGTT GTCTCCGGGC chr20:34329549-34329629 50 2.78e-05 TTCAACTGGC GCCATGTT GGGAGGTCGC chrX:47180872-47180952 52 2.78e-05 CTCGGGCGCC GCCATGTT GGATGACGTT chrX:47696103-47696183 5 2.78e-05 CGCG GCCATGTT CCCCACCTGA chr12:72058010-72058090 8 2.78e-05 TGTGTCC GCCATGTT GGTGAAGTCA chr10:104192355-10419243 46 2.78e-05 CGCCGTGGCG GCCATGTT TGAGAAGGGC chr22:38577998-38578078 44 2.78e-05 GCGAGGCGCG GCCATGTT TGTGCGGGGC chr6:33168540-33168620 60 3.36e-05 CCGGAGTGCC GCCATATT GGTAAAGGCA chr16:5083869-5083949 42 3.36e-05 CGTGGAGGTC GCCATATT GGACCGGGGC chr3:122102010-122102090 57 3.36e-05 ACTGGGCGCC GCCATATT GGACAAACAC chr20:3762018-3762098 63 3.36e-05 GCTGGGAGCG GCCATATT GTTTTCTGAA chrX:47225775-47225855 56 3.36e-05 ACATAGCGCA GCCATATT CCTCGCCTGA chr10:38265585-38265665 61 3.96e-05 CGGCTGCGAC TCCATCTT GGATGACGTC chr20:40322141-40322221 53 4.87e-05 ATATGGGGGA TCCATTTT ACCCACCGTA chr7:27200671-27200751 11 4.87e-05 GTGTCAAGTC GACATCTT AGGAACTTCA chr19:19600093-19600173 10 4.87e-05 CCTGGCGCC TCCATTTT CTGACAGTAC chr15:79165917-79165997 39 5.94e-05 AGATGGCGGC GCCATCAT GGCCGCCGGC chr3:101396078-101396158 23 6.26e-05 AATGCGGGTG GACATTTT GGAAGCGGGT chr17:74732606-74732686 21 6.85e-05 cgcccaggcc gccATTAT CTCGCCGCCA chrX:24168513-24168593 43 9.41e-05 TGCCCTTGCC GCCATGAT GAGCGCTCGG chrX:152127448-152127528 31 1.34e-04 TGCGCGTGCC GCCATTTC CTGCAGCCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:40213194-40213274 1.1e-05 34_[+1]_38 chr1:111505920-111506000 1.1e-05 31_[+1]_41 chr1:228270380-228270460 1.1e-05 34_[+1]_38 chr18:9914588-9914668 1.1e-05 21_[+1]_51 chr19:13044581-13044661 1.1e-05 13_[+1]_59 chrX:48433232-48433312 1.1e-05 11_[+1]_61 chrX:53710719-53710799 1.1e-05 35_[+1]_37 chr15:41624720-41624800 1.1e-05 34_[+1]_38 chr10:120101783-12010186 1.1e-05 22_[+1]_50 chr1:160254889-160254969 1.1e-05 20_[+1]_52 chr2:242255025-242255105 1.1e-05 30_[+1]_42 chr7:74489575-74489655 1.1e-05 32_[+1]_40 chr21:47744314-47744394 1.1e-05 47_[+1]_25 chrX:153236549-153236629 1.1e-05 69_[+1]_3 chr18:55289097-55289177 1.1e-05 45_[+1]_27 chr17:4871072-4871152 1.1e-05 22_[+1]_50 chr19:37019511-37019591 1.1e-05 53_[+1]_19 chrX:48455837-48455917 1.1e-05 59_[+1]_13 chr22:49448236-49448316 1.1e-05 47_[+1]_25 chr11:124670247-12467032 1.1e-05 24_[+1]_48 chr2:48667716-48667796 1.1e-05 31_[+1]_41 chrX:54071041-54071121 1.1e-05 38_[+1]_34 chr17:40021594-40021674 1.1e-05 24_[+1]_48 chr7:156195075-156195155 1.1e-05 43_[+1]_29 chr9:101018092-101018172 1.1e-05 29_[+1]_43 chr12:32908772-32908852 1.1e-05 31_[+1]_41 chr14:103851694-10385177 1.1e-05 49_[+1]_23 chr11:62414036-62414116 1.1e-05 30_[+1]_42 chrX:153237007-153237087 1.1e-05 29_[+1]_43 chr6:149364796-149364876 1.1e-05 34_[+1]_38 chr15:41836396-41836476 1.1e-05 44_[+1]_28 chr12:14538184-14538264 1.1e-05 18_[+1]_54 chr5:139682604-139682684 1.1e-05 49_[+1]_23 chr19:1021060-1021140 1.1e-05 44_[+1]_28 chr16:29827280-29827360 1.1e-05 27_[+1]_45 chr22:30820009-30820089 1.1e-05 34_[+1]_38 chr6:37467737-37467817 1.1e-05 28_[+1]_44 chr11:64052909-64052989 1.1e-05 36_[+1]_36 chr12:117628214-11762829 1.1e-05 42_[+1]_30 chr7:43909032-43909112 1.1e-05 57_[+1]_15 chr4:186346872-186346952 1.1e-05 33_[+1]_39 chr22:24059540-24059620 1.1e-05 55_[+1]_17 chr12:121148238-12114831 1.1e-05 19_[+1]_53 chr19:59070462-59070542 1.1e-05 40_[+1]_32 chr3:125314450-125314530 1.1e-05 36_[+1]_36 chr19:56135880-56135960 1.1e-05 42_[+1]_30 chr14:100706284-10070636 1.1e-05 56_[+1]_16 chr19:52552118-52552198 1.1e-05 39_[+1]_33 chr19:52408293-52408373 1.1e-05 58_[+1]_14 chr17:2415125-2415205 1.1e-05 47_[+1]_25 chr19:13067981-13068061 1.1e-05 40_[+1]_32 chrX:1021106-1021186 1.1e-05 51_[+1]_21 chr12:110434195-11043427 1.1e-05 51_[+1]_21 chr17:42767076-42767156 1.1e-05 40_[+1]_32 chr1:6685210-6685290 1.1e-05 32_[+1]_40 chr1:35657726-35657806 1.1e-05 53_[+1]_19 chrX:47342061-47342141 1.1e-05 47_[+1]_25 chr6:33539144-33539224 1.1e-05 58_[+1]_14 chr11:10879301-10879381 1.1e-05 32_[+1]_40 chr10:121632439-12163251 1.1e-05 42_[+1]_30 chr10:123687579-12368765 1.1e-05 56_[+1]_16 chr6:74363763-74363843 1.1e-05 27_[+1]_45 chr2:201728922-201729002 1.1e-05 22_[+1]_50 chr10:99393276-99393356 1.1e-05 63_[+1]_9 chrX:63615377-63615457 1.1e-05 45_[+1]_27 chr10:99639063-99639143 1.1e-05 37_[+1]_35 chr19:12886440-12886520 1.1e-05 37_[+1]_35 chr20:35374592-35374672 1.1e-05 61_[+1]_11 chr19:52511480-52511560 1.1e-05 53_[+1]_19 chr9:115818987-115819067 1.1e-05 59_[+1]_13 chr3:119187741-119187821 1.1e-05 59_[+1]_13 chr19:52552603-52552683 1.1e-05 35_[+1]_37 chr1:110089085-110089165 1.7e-05 68_[+1]_4 chr1:223886059-223886139 1.7e-05 57_[+1]_15 chr17:74099892-74099972 1.7e-05 56_[+1]_16 chr15:93461228-93461308 1.7e-05 17_[+1]_55 chr17:61904465-61904545 1.7e-05 49_[+1]_23 chr11:10830147-10830227 1.7e-05 58_[+1]_14 chr1:97187329-97187409 1.7e-05 14_[+1]_58 chr19:41870179-41870259 1.7e-05 34_[+1]_38 chr19:38826380-38826460 1.7e-05 59_[+1]_13 chr8:95835477-95835557 1.7e-05 37_[+1]_35 chr20:10415753-10415833 1.7e-05 29_[+1]_43 chr5:170814466-170814546 1.7e-05 28_[+1]_44 chr5:133561206-133561286 1.7e-05 31_[+1]_41 chrX:77041662-77041742 1.7e-05 21_[+1]_51 chr14:88459563-88459643 1.7e-05 40_[+1]_32 chr3:56716881-56716961 1.7e-05 30_[+1]_42 chr2:62733016-62733096 1.7e-05 55_[+1]_17 chr10:70092221-70092301 1.7e-05 34_[+1]_38 chr19:37663730-37663810 1.7e-05 60_[+1]_12 chr14:70234389-70234469 1.7e-05 3_[+1]_69 chr3:185655203-185655283 1.7e-05 7_[+1]_65 chr2:27357616-27357696 1.7e-05 39_[+1]_33 chr1:2457986-2458066 1.7e-05 35_[+1]_37 chr17:4270071-4270151 1.7e-05 1_[+1]_71 chr5:176981593-176981673 1.7e-05 63_[+1]_9 chr9:131084732-131084812 2.8e-05 38_[+1]_34 chr9:139137601-139137681 2.8e-05 43_[+1]_29 chr1:161719557-161719637 2.8e-05 31_[+1]_41 chr9:139667919-139667999 2.8e-05 20_[+1]_52 chr7:5553459-5553539 2.8e-05 33_[+1]_39 chr9:124855640-124855720 2.8e-05 52_[+1]_20 chr19:52490168-52490248 2.8e-05 59_[+1]_13 chr11:107436390-10743647 2.8e-05 53_[+1]_19 chr18:55297479-55297559 2.8e-05 35_[+1]_37 chr20:34329549-34329629 2.8e-05 49_[+1]_23 chrX:47180872-47180952 2.8e-05 51_[+1]_21 chrX:47696103-47696183 2.8e-05 4_[+1]_68 chr12:72058010-72058090 2.8e-05 7_[+1]_65 chr10:104192355-10419243 2.8e-05 45_[+1]_27 chr22:38577998-38578078 2.8e-05 43_[+1]_29 chr6:33168540-33168620 3.4e-05 59_[+1]_13 chr16:5083869-5083949 3.4e-05 41_[+1]_31 chr3:122102010-122102090 3.4e-05 56_[+1]_16 chr20:3762018-3762098 3.4e-05 62_[+1]_10 chrX:47225775-47225855 3.4e-05 55_[+1]_17 chr10:38265585-38265665 4e-05 60_[+1]_12 chr20:40322141-40322221 4.9e-05 52_[+1]_20 chr7:27200671-27200751 4.9e-05 10_[+1]_62 chr19:19600093-19600173 4.9e-05 9_[+1]_63 chr15:79165917-79165997 5.9e-05 38_[+1]_34 chr3:101396078-101396158 6.3e-05 22_[+1]_50 chr17:74732606-74732686 6.8e-05 20_[+1]_52 chrX:24168513-24168593 9.4e-05 42_[+1]_30 chrX:152127448-152127528 0.00013 30_[+1]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCATCTT width=8 seqs=126 chr15:40213194-40213274 ( 35) GCCATCTT 1 chr1:111505920-111506000 ( 32) GCCATCTT 1 chr1:228270380-228270460 ( 35) GCCATCTT 1 chr18:9914588-9914668 ( 22) GCCATCTT 1 chr19:13044581-13044661 ( 14) GCCATCTT 1 chrX:48433232-48433312 ( 12) GCCATCTT 1 chrX:53710719-53710799 ( 36) GCCATCTT 1 chr15:41624720-41624800 ( 35) GCCATCTT 1 chr10:120101783-12010186 ( 23) GCCATCTT 1 chr1:160254889-160254969 ( 21) GCCATCTT 1 chr2:242255025-242255105 ( 31) GCCATCTT 1 chr7:74489575-74489655 ( 33) GCCATCTT 1 chr21:47744314-47744394 ( 48) GCCATCTT 1 chrX:153236549-153236629 ( 70) GCCATCTT 1 chr18:55289097-55289177 ( 46) GCCATCTT 1 chr17:4871072-4871152 ( 23) GCCATCTT 1 chr19:37019511-37019591 ( 54) GCCATCTT 1 chrX:48455837-48455917 ( 60) GCCATCTT 1 chr22:49448236-49448316 ( 48) GCCATCTT 1 chr11:124670247-12467032 ( 25) GCCATCTT 1 chr2:48667716-48667796 ( 32) GCCATCTT 1 chrX:54071041-54071121 ( 39) GCCATCTT 1 chr17:40021594-40021674 ( 25) GCCATCTT 1 chr7:156195075-156195155 ( 44) GCCATCTT 1 chr9:101018092-101018172 ( 30) GCCATCTT 1 chr12:32908772-32908852 ( 32) GCCATCTT 1 chr14:103851694-10385177 ( 50) GCCATCTT 1 chr11:62414036-62414116 ( 31) GCCATCTT 1 chrX:153237007-153237087 ( 30) GCCATCTT 1 chr6:149364796-149364876 ( 35) GCCATCTT 1 chr15:41836396-41836476 ( 45) GCCATCTT 1 chr12:14538184-14538264 ( 19) GCCATCTT 1 chr5:139682604-139682684 ( 50) GCCATCTT 1 chr19:1021060-1021140 ( 45) GCCATCTT 1 chr16:29827280-29827360 ( 28) GCCATCTT 1 chr22:30820009-30820089 ( 35) GCCATCTT 1 chr6:37467737-37467817 ( 29) GCCATCTT 1 chr11:64052909-64052989 ( 37) GCCATCTT 1 chr12:117628214-11762829 ( 43) GCCATCTT 1 chr7:43909032-43909112 ( 58) GCCATCTT 1 chr4:186346872-186346952 ( 34) GCCATCTT 1 chr22:24059540-24059620 ( 56) GCCATCTT 1 chr12:121148238-12114831 ( 20) GCCATCTT 1 chr19:59070462-59070542 ( 41) GCCATCTT 1 chr3:125314450-125314530 ( 37) GCCATCTT 1 chr19:56135880-56135960 ( 43) GCCATCTT 1 chr14:100706284-10070636 ( 57) GCCATCTT 1 chr19:52552118-52552198 ( 40) GCCATCTT 1 chr19:52408293-52408373 ( 59) GCCATCTT 1 chr17:2415125-2415205 ( 48) GCCATCTT 1 chr19:13067981-13068061 ( 41) GCCATCTT 1 chrX:1021106-1021186 ( 52) GCCATCTT 1 chr12:110434195-11043427 ( 52) GCCATCTT 1 chr17:42767076-42767156 ( 41) GCCATCTT 1 chr1:6685210-6685290 ( 33) GCCATCTT 1 chr1:35657726-35657806 ( 54) GCCATCTT 1 chrX:47342061-47342141 ( 48) GCCATCTT 1 chr6:33539144-33539224 ( 59) GCCATCTT 1 chr11:10879301-10879381 ( 33) GCCATCTT 1 chr10:121632439-12163251 ( 43) GCCATCTT 1 chr10:123687579-12368765 ( 57) GCCATCTT 1 chr6:74363763-74363843 ( 28) GCCATCTT 1 chr2:201728922-201729002 ( 23) GCCATCTT 1 chr10:99393276-99393356 ( 64) GCCATCTT 1 chrX:63615377-63615457 ( 46) GCCATCTT 1 chr10:99639063-99639143 ( 38) GCCATCTT 1 chr19:12886440-12886520 ( 38) GCCATCTT 1 chr20:35374592-35374672 ( 62) GCCATCTT 1 chr19:52511480-52511560 ( 54) GCCATCTT 1 chr9:115818987-115819067 ( 60) GCCATCTT 1 chr3:119187741-119187821 ( 60) GCCATCTT 1 chr19:52552603-52552683 ( 36) GCCATCTT 1 chr1:110089085-110089165 ( 69) GCCATTTT 1 chr1:223886059-223886139 ( 58) GCCATTTT 1 chr17:74099892-74099972 ( 57) GCCATTTT 1 chr15:93461228-93461308 ( 18) GCCATTTT 1 chr17:61904465-61904545 ( 50) GCCATTTT 1 chr11:10830147-10830227 ( 59) GCCATTTT 1 chr1:97187329-97187409 ( 15) GCCATTTT 1 chr19:41870179-41870259 ( 35) GCCATTTT 1 chr19:38826380-38826460 ( 60) GCCATTTT 1 chr8:95835477-95835557 ( 38) GCCATTTT 1 chr20:10415753-10415833 ( 30) GCCATTTT 1 chr5:170814466-170814546 ( 29) GCCATTTT 1 chr5:133561206-133561286 ( 32) GCCATTTT 1 chrX:77041662-77041742 ( 22) GCCATTTT 1 chr14:88459563-88459643 ( 41) GCCATTTT 1 chr3:56716881-56716961 ( 31) GCCATTTT 1 chr2:62733016-62733096 ( 56) GCCATTTT 1 chr10:70092221-70092301 ( 35) GCCATTTT 1 chr19:37663730-37663810 ( 61) GCCATTTT 1 chr14:70234389-70234469 ( 4) GCCATTTT 1 chr3:185655203-185655283 ( 8) GCCATTTT 1 chr2:27357616-27357696 ( 40) GCCATTTT 1 chr1:2457986-2458066 ( 36) GCCATTTT 1 chr17:4270071-4270151 ( 2) GCCATTTT 1 chr5:176981593-176981673 ( 64) GCCATTTT 1 chr9:131084732-131084812 ( 39) GCCATGTT 1 chr9:139137601-139137681 ( 44) GCCATGTT 1 chr1:161719557-161719637 ( 32) GCCATGTT 1 chr9:139667919-139667999 ( 21) GCCATGTT 1 chr7:5553459-5553539 ( 34) GCCATGTT 1 chr9:124855640-124855720 ( 53) GCCATGTT 1 chr19:52490168-52490248 ( 60) GCCATGTT 1 chr11:107436390-10743647 ( 54) GCCATGTT 1 chr18:55297479-55297559 ( 36) GCCATGTT 1 chr20:34329549-34329629 ( 50) GCCATGTT 1 chrX:47180872-47180952 ( 52) GCCATGTT 1 chrX:47696103-47696183 ( 5) GCCATGTT 1 chr12:72058010-72058090 ( 8) GCCATGTT 1 chr10:104192355-10419243 ( 46) GCCATGTT 1 chr22:38577998-38578078 ( 44) GCCATGTT 1 chr6:33168540-33168620 ( 60) GCCATATT 1 chr16:5083869-5083949 ( 42) GCCATATT 1 chr3:122102010-122102090 ( 57) GCCATATT 1 chr20:3762018-3762098 ( 63) GCCATATT 1 chrX:47225775-47225855 ( 56) GCCATATT 1 chr10:38265585-38265665 ( 61) TCCATCTT 1 chr20:40322141-40322221 ( 53) TCCATTTT 1 chr7:27200671-27200751 ( 11) GACATCTT 1 chr19:19600093-19600173 ( 10) TCCATTTT 1 chr15:79165917-79165997 ( 39) GCCATCAT 1 chr3:101396078-101396158 ( 23) GACATTTT 1 chr17:74732606-74732686 ( 21) GCCATTAT 1 chrX:24168513-24168593 ( 43) GCCATGAT 1 chrX:152127448-152127528 ( 31) GCCATTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.89406 E= 2.0e-229 -1362 -1362 159 -290 -345 160 -1362 -1362 -1362 162 -1362 -1362 253 -1362 -1362 -1362 -1362 -1362 -1362 249 -213 87 -135 42 -286 -1362 -1362 246 -1362 -535 -1362 248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 2.0e-229 0.000000 0.000000 0.976190 0.023810 0.015873 0.984127 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.039683 0.595238 0.126984 0.238095 0.023810 0.000000 0.000000 0.976190 0.000000 0.007937 0.000000 0.992063 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCATCTT MEME-1 regular expression -------------------------------------------------------------------------------- GCCAT[CT]TT -------------------------------------------------------------------------------- Time 4.89 secs. ******************************************************************************** ******************************************************************************** MOTIF AAGATGGC MEME-2 width = 8 sites = 124 llr = 1206 E-value = 6.2e-198 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 Description -------------------------------------------------------------------------------- Simplified A aa2a:::: pos.-specific C ::3::::a probability G ::6::aa: matrix T ::::a::: bits 2.5 * 2.3 ** ** 2.0 ** ** 1.8 ** ** Relative 1.5 ** **** Entropy 1.3 ** ***** (14.0 bits) 1.0 ** ***** 0.8 ** ***** 0.5 ** ***** 0.3 ******** 0.0 -------- Multilevel AAGATGGC consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:4007722-4007802 34 1.04e-05 GCTGGTGACC AAGATGGC GGCGGAGCTG chr2:73441364-73441444 28 1.04e-05 AGGCGCGCCC AAGATGGC GGCCTCCATG chr11:695776-695856 49 1.04e-05 CGGGGCGGGT AAGATGGC GGCCCCGCGG chr1:150849133-150849213 49 1.04e-05 CGCGGAATCC AAGATGGC GGCTTCAGCA chr17:3572080-3572160 38 1.04e-05 TCTTCCGAGC AAGATGGC GCCGCGGGCA chr20:44563256-44563336 8 1.04e-05 CACACTC AAGATGGC GGCGCGGCCG chr1:161195803-161195883 54 1.04e-05 GCCATCACTC AAGATGGC TGCCCCCATC chr14:102606204-10260628 54 1.04e-05 GCTGCTTTCC AAGATGGC GACGGAGGGA chr5:134074093-134074173 18 1.04e-05 GCCCTCACTC AAGATGGC GGCCAGAGCC chr1:156163712-156163792 24 1.04e-05 GCCCAAATCC AAGATGGC TACCAGGAGG chr8:20054866-20054946 49 1.04e-05 CAGAGGAGAC AAGATGGC GCTGCGGGCG chr2:48667716-48667796 52 1.04e-05 ACCATGAGTC AAGATGGC GCCCCCTGGT chr14:23298987-23299067 45 1.04e-05 ACCCAGATTC AAGATGGC GACTTCCTGC chr7:94139375-94139455 19 1.04e-05 TGGAGGAACC AAGATGGC GGCTCTGGCC chr11:119205202-11920528 39 1.04e-05 CTTTGCACAC AAGATGGC GGCGCCCAGC chr22:46067901-46067981 40 1.04e-05 TGTGAGCGGC AAGATGGC GGCGCCCAGG chr3:51422426-51422506 33 1.04e-05 GCCCTTACCC AAGATGGC GGCCCACACC chr9:123964109-123964189 34 1.04e-05 GGGCTGGTCC AAGATGGC GGCGCTCCCT chr6:41040162-41040242 46 1.04e-05 GCACGCATCT AAGATGGC CGCCCCCGCC chr11:74459890-74459970 33 1.04e-05 AACGGGAAAC AAGATGGC GGCTGCAGGT chr12:124155640-12415572 42 1.04e-05 GTTCGCTTGC AAGATGGC GGCGGCGGGG chr11:34938165-34938245 35 1.04e-05 GAAGGCCGTC AAGATGGC GGCCTCCTGG chr5:1799947-1800027 32 1.04e-05 GCCAGGAAGG AAGATGGC GGCGGGGGGG chr8:145149994-145150074 6 1.04e-05 AGGCC AAGATGGC GGCAGCTGCG chr16:30773635-30773715 15 1.04e-05 GGTGAAATCC AAGATGGC GGCGCTAGGC chr15:79165917-79165997 28 1.04e-05 TGGCCGTTGC AAGATGGC GGCGCCATCA chr7:152456684-152456764 50 1.04e-05 GCCAGCACTA AAGATGGC GCGCCGGAGT chr9:139702364-139702444 35 1.04e-05 AGCCGGCGCC AAGATGGC GGCGCTGACT chr15:93426025-93426105 45 1.04e-05 CACACGGCAC AAGATGGC CGGAGAGGCA chr1:155179020-155179100 20 1.04e-05 GAGGGTGGGC AAGATGGC GGCGCCCATG chr5:134209961-134210041 14 1.04e-05 GCCCGACTCC AAGATGGC GCCCGCCACA chr18:54318376-54318456 31 1.04e-05 TCCCACAACC AAGATGGC GGCCGTGCAC chr19:52430573-52430653 23 1.04e-05 GCAGGATTCA AAGATGGC TGCCTCCAGT chr11:62477055-62477135 19 1.04e-05 CTCCCATTCC AAGATGGC CGTACCAACA chr2:28974975-28975055 13 1.04e-05 CTGTGCCGAC AAGATGGC GGACGGGGAG chr13:50018078-50018158 22 1.04e-05 AGCCACACAC AAGATGGC AGCCTCACAC chr17:71189128-71189208 17 1.04e-05 GCCCCCAACG AAGATGGC GGAGGGGGCG chr3:19989237-19989317 33 1.04e-05 TTCCCTTCTC AAGATGGC GCCGTGGAAA chr22:38453150-38453230 31 1.04e-05 TGCCCTTCCC AAGATGGC GGCGGCGGCA chr2:242576748-242576828 32 1.04e-05 TCCGTACCGC AAGATGGC TGCTCGGACG chrX:30907499-30907579 34 1.04e-05 GCCAGGCACA AAGATGGC GCCGCCGGGT chr1:161129265-161129345 46 1.04e-05 GGGACCAACA AAGATGGC GGCGGCCCCT chr3:185655203-185655283 49 1.04e-05 CCGCCAGCCC AAGATGGC TGCGGCGGAC chr2:74055922-74056002 12 1.04e-05 TTCCTTTACC AAGATGGC CGCTGTGTCG chr3:53916186-53916266 44 1.04e-05 GCCCACAGTC AAGATGGC CGCCGCGGAG chr9:32552290-32552370 47 1.04e-05 GCCCGGCTAA AAGATGGC TGCTGGCGCC chr1:154297867-154297947 51 1.04e-05 GCCCCGCACA AAGATGGC TGCTccctcc chr1:43149947-43150027 47 1.04e-05 CATCATTTTC AAGATGGC TGCCAAGGCT chr10:105127703-10512778 41 1.04e-05 GCTCAGCCGC AAGATGGC GGCGCTGGCG chr8:145515254-145515334 38 1.04e-05 CGCCCGTTGC AAGATGGC GGCGGCCATG chr5:174905973-174906053 25 1.04e-05 CGGGGACACC AAGATGGC TGCCTCGGGG chr19:49127369-49127449 13 1.04e-05 TCCCTTAACA AAGATGGC GACAACGGCG chr6:6737584-6737664 39 1.04e-05 CTCCGCGGGC AAGATGGC CGCTGGGTCC chr22:50312049-50312129 33 1.04e-05 GCCCTGAGTA AAGATGGC CGCCGCGGGC chrX:47225775-47225855 21 1.04e-05 AATGGGTGCT AAGATGGC GGCTCCCAAG chr19:52511480-52511560 14 1.04e-05 GCGCAGATGC AAGATGGC CGCGCCCTCG chr10:104678259-10467833 54 1.04e-05 GCCCACTTGG AAGATGGC GGCGCGCCGC chr8:120885975-120886055 15 1.04e-05 GCCCCGAACA AAGATGGC GCGGGAAGCG chr11:67980734-67980814 25 1.04e-05 AGTAAAATCC AAGATGGC GGCGCGGGCC chr1:161190640-161190720 45 1.04e-05 TCCAGGCTCC AAGATGGC TACCAGGCCA chr1:155658070-155658150 36 1.59e-05 AAGCGAACCC AAAATGGC GGCGGCAGCG chr19:8509854-8509934 26 1.59e-05 AGACGCGGAG AAAATGGC GGCAGGGGTC chr11:66886724-66886804 31 1.59e-05 TGACGGGTTC AAAATGGC GGCGGCTGCT chr5:140937514-140937594 34 1.59e-05 CAATCTGTCT AAAATGGC TGAATGCGGT chr1:46152177-46152257 18 1.59e-05 AGCTCTTCCC AAAATGGC TGCCCGGCCC chr2:67624431-67624511 41 1.59e-05 CCCACCGACC AAAATGGC GGCTGCCGTT chr14:31494829-31494909 36 1.59e-05 ACTAAAAGCC AAAATGGC TGCCCCGAGG chr16:9057697-9057777 43 1.59e-05 GCTCGCTCTC AAAATGGC GGCGGCGTGA chr19:52490168-52490248 23 1.59e-05 CCTACTCTGT AAAATGGC CGCGCCCATA chr12:14538184-14538264 66 1.59e-05 CAGCTGTCTC AAAATGGC TGCTAAC chr2:64751252-64751332 44 1.59e-05 GCCCGCACCC AAAATGGC GGTCGGCGCT chr1:78245221-78245301 8 1.59e-05 CTAAACA AAAATGGC GGGAGCTGCT chr10:121356148-12135622 34 1.59e-05 gaggaTGAAC AAAATGGC CGCCGCCACC chr11:67250486-67250566 35 1.59e-05 GCCCTCAACC AAAATGGC GCTAGCTCGG chrX:47180872-47180952 13 1.59e-05 AACCTCAAAC AAAATGGC GGCGCCCACA chr16:30546254-30546334 33 1.59e-05 GCCCTAATCC AAAATGGC CGTTGCGGCT chr3:179065377-179065457 33 1.59e-05 GCCCTTAAGG AAAATGGC GCCTGGCATA chr19:49990535-49990615 10 2.63e-05 CCACTCACA AACATGGC GGACAGAGCG chr5:147763379-147763459 29 2.63e-05 TGCCACGCTG AACATGGC TGCCGCGCTT chr3:66271410-66271490 29 2.63e-05 ACCCGCCTCA AACATGGC GGCGCCCAGC chr4:128554089-128554169 29 2.63e-05 AAGCAGAGGC AACATGGC GGCCTTAGCA chr11:45376918-45376998 40 2.63e-05 CGCCACACAC AACATGGC GGCTTCCTGG chr2:24583334-24583414 51 2.63e-05 GCCCCACAAC AACATGGC GGCCGCGGCC chr20:34042823-34042903 25 2.63e-05 GCCAATACCC AACATGGC GGGAGGCCCT chr1:27114325-27114405 34 2.63e-05 GCCCGGAGTC AACATGGC CGCCGCGCAG chr1:222791437-222791517 13 2.63e-05 AGGTGACCAC AACATGGC TGCGGCGCCT chr9:133568968-133569048 66 2.63e-05 GCCAATTGTA AACATGGC CTCTAGG chr2:74710098-74710178 38 2.63e-05 GCCCCTAACA AACATGGC CGCCCACTCT chr12:101673874-10167395 31 2.63e-05 CCTTGTCTCC AACATGGC GGCGCCCAGG chr2:105654498-105654578 50 2.63e-05 TCCCACAGCT AACATGGC GGCGCCCTGT chr15:69110525-69110605 55 2.63e-05 agccccgggA AACATGGC TGCTCGTCCT chr19:37663730-37663810 22 2.63e-05 TCCGGCAGAG AACATGGC CGCGCCCTTA chr11:33060868-33060948 14 2.63e-05 TCCGTACGAA AACATGGC GCCTCACTGC chr5:130506381-130506461 35 2.63e-05 GCCCCTAACT AACATGGC GTCCAGGTGA chrX:47342061-47342141 10 2.63e-05 CAGGCAAGG AACATGGC TGTCTCCTTG chr16:68877420-68877500 33 2.63e-05 TGCCACACTT AACATGGC GGCGGCGGCG chr2:201728922-201729002 54 2.63e-05 GGCGGTTCAC AACATGGC GCCCGCCCGA chr19:50321431-50321511 42 2.63e-05 GCCCCGCACA AACATGGC AGCATTCCCA chr2:31456841-31456921 40 2.63e-05 CCTGCCCACA AACATGGC GGCGCCCTGC chr1:90460391-90460471 36 2.63e-05 GCCAGGTTCA AACATGGC GGGCCGCAGC chr11:73490508-73490588 29 2.63e-05 AGCCACACTC AACATGGC CGCCAGCGTC chr10:104220987-10422106 37 2.63e-05 GCCCGTGACA AACATGGC GGCGGCAGCC chr18:23501755-23501835 41 3.20e-05 GCCTGGCTTC AAGATGGT AGCCATGAAG chr18:39535005-39535085 45 3.20e-05 GCCCTTAAGC AAGATGGT GGGCGCCTTG chr20:35374592-35374672 29 3.20e-05 AACTACCGAG AAGATGGT GGCTGAGCCA chr16:57769199-57769279 18 3.76e-05 GCCCCACTCC AAGATGGA AGGCCTGAGG chr7:27200671-27200751 47 5.99e-05 GCGGAGGCGG GAGATGGC GGCGCGGAAG chr1:35657726-35657806 9 6.86e-05 CAGCCGAC AAAATGGA AGCCCAGCGC chr15:93461228-93461308 53 1.01e-04 ACACTAAAGT GAAATGGC GGCTTTTGGG chrX:152110189-152110269 61 1.01e-04 TCCACAAAGT GAAATGGC CGCCCGGGAC chr19:50379870-50379950 38 1.40e-04 GCCCTCAAAA GACATGGC GGCGCCTTGC chr20:5730946-5731026 33 1.40e-04 GCCCGCAGTA AGGATGGC TCCGGTGACT chr9:131873614-131873694 6 1.40e-04 GCACT GACATGGC CGTCGCCCGG chr15:36871733-36871813 33 1.40e-04 GCCCTTAACT GACATGGC GGCTAGTTGC chrX:48433232-48433312 73 1.49e-04 GCAGTGGCAC AAAATGAC chr1:110089085-110089165 55 2.16e-04 GAGGGCATTA AACATTGC CTGGCAGCCA chr2:98612606-98612686 51 2.16e-04 GCCAGGACTT ATGATGGC GGCTTCTGCT chr12:32908772-32908852 20 2.16e-04 AAAGGACCGC AAGATGGG CGCCGCCATC chr9:124855640-124855720 63 2.16e-04 GCCATGTTGG AAGAGGGC AAAGAGCCGC chr19:52408293-52408373 21 2.16e-04 TCGAGGAGGT AACATGTC CGCGCCCTGA chr16:19566853-19566933 48 2.46e-04 GCCCCTCACA AGCATGGC GTCTGCAGAA chr19:7598920-7599000 62 2.46e-04 CGGCCTTCCA AGCATGGC GCGGGGAGGA chr19:13044581-13044661 40 3.23e-04 CTAACTGTAG AACAGGGC TCAATGTGTC chr10:120101783-12010186 42 3.23e-04 GGACCCCGTC AACATCGC GCCTTCTCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:4007722-4007802 1e-05 33_[+2]_39 chr2:73441364-73441444 1e-05 27_[+2]_45 chr11:695776-695856 1e-05 48_[+2]_24 chr1:150849133-150849213 1e-05 48_[+2]_24 chr17:3572080-3572160 1e-05 37_[+2]_35 chr20:44563256-44563336 1e-05 7_[+2]_65 chr1:161195803-161195883 1e-05 53_[+2]_19 chr14:102606204-10260628 1e-05 53_[+2]_19 chr5:134074093-134074173 1e-05 17_[+2]_55 chr1:156163712-156163792 1e-05 23_[+2]_49 chr8:20054866-20054946 1e-05 48_[+2]_24 chr2:48667716-48667796 1e-05 51_[+2]_21 chr14:23298987-23299067 1e-05 44_[+2]_28 chr7:94139375-94139455 1e-05 18_[+2]_54 chr11:119205202-11920528 1e-05 38_[+2]_34 chr22:46067901-46067981 1e-05 39_[+2]_33 chr3:51422426-51422506 1e-05 32_[+2]_40 chr9:123964109-123964189 1e-05 33_[+2]_39 chr6:41040162-41040242 1e-05 45_[+2]_27 chr11:74459890-74459970 1e-05 32_[+2]_40 chr12:124155640-12415572 1e-05 41_[+2]_31 chr11:34938165-34938245 1e-05 34_[+2]_38 chr5:1799947-1800027 1e-05 31_[+2]_41 chr8:145149994-145150074 1e-05 5_[+2]_67 chr16:30773635-30773715 1e-05 14_[+2]_58 chr15:79165917-79165997 1e-05 27_[+2]_45 chr7:152456684-152456764 1e-05 49_[+2]_23 chr9:139702364-139702444 1e-05 34_[+2]_38 chr15:93426025-93426105 1e-05 44_[+2]_28 chr1:155179020-155179100 1e-05 19_[+2]_53 chr5:134209961-134210041 1e-05 13_[+2]_59 chr18:54318376-54318456 1e-05 30_[+2]_42 chr19:52430573-52430653 1e-05 22_[+2]_50 chr11:62477055-62477135 1e-05 18_[+2]_54 chr2:28974975-28975055 1e-05 12_[+2]_60 chr13:50018078-50018158 1e-05 21_[+2]_51 chr17:71189128-71189208 1e-05 16_[+2]_56 chr3:19989237-19989317 1e-05 32_[+2]_40 chr22:38453150-38453230 1e-05 30_[+2]_42 chr2:242576748-242576828 1e-05 31_[+2]_41 chrX:30907499-30907579 1e-05 33_[+2]_39 chr1:161129265-161129345 1e-05 45_[+2]_27 chr3:185655203-185655283 1e-05 48_[+2]_24 chr2:74055922-74056002 1e-05 11_[+2]_61 chr3:53916186-53916266 1e-05 43_[+2]_29 chr9:32552290-32552370 1e-05 46_[+2]_26 chr1:154297867-154297947 1e-05 50_[+2]_22 chr1:43149947-43150027 1e-05 46_[+2]_26 chr10:105127703-10512778 1e-05 40_[+2]_32 chr8:145515254-145515334 1e-05 37_[+2]_35 chr5:174905973-174906053 1e-05 24_[+2]_48 chr19:49127369-49127449 1e-05 12_[+2]_60 chr6:6737584-6737664 1e-05 38_[+2]_34 chr22:50312049-50312129 1e-05 32_[+2]_40 chrX:47225775-47225855 1e-05 20_[+2]_52 chr19:52511480-52511560 1e-05 13_[+2]_59 chr10:104678259-10467833 1e-05 53_[+2]_19 chr8:120885975-120886055 1e-05 14_[+2]_58 chr11:67980734-67980814 1e-05 24_[+2]_48 chr1:161190640-161190720 1e-05 44_[+2]_28 chr1:155658070-155658150 1.6e-05 35_[+2]_37 chr19:8509854-8509934 1.6e-05 25_[+2]_47 chr11:66886724-66886804 1.6e-05 30_[+2]_42 chr5:140937514-140937594 1.6e-05 33_[+2]_39 chr1:46152177-46152257 1.6e-05 17_[+2]_55 chr2:67624431-67624511 1.6e-05 40_[+2]_32 chr14:31494829-31494909 1.6e-05 35_[+2]_37 chr16:9057697-9057777 1.6e-05 42_[+2]_30 chr19:52490168-52490248 1.6e-05 22_[+2]_50 chr12:14538184-14538264 1.6e-05 65_[+2]_7 chr2:64751252-64751332 1.6e-05 43_[+2]_29 chr1:78245221-78245301 1.6e-05 7_[+2]_65 chr10:121356148-12135622 1.6e-05 33_[+2]_39 chr11:67250486-67250566 1.6e-05 34_[+2]_38 chrX:47180872-47180952 1.6e-05 12_[+2]_60 chr16:30546254-30546334 1.6e-05 32_[+2]_40 chr3:179065377-179065457 1.6e-05 32_[+2]_40 chr19:49990535-49990615 2.6e-05 9_[+2]_63 chr5:147763379-147763459 2.6e-05 28_[+2]_44 chr3:66271410-66271490 2.6e-05 28_[+2]_44 chr4:128554089-128554169 2.6e-05 28_[+2]_44 chr11:45376918-45376998 2.6e-05 39_[+2]_33 chr2:24583334-24583414 2.6e-05 50_[+2]_22 chr20:34042823-34042903 2.6e-05 24_[+2]_48 chr1:27114325-27114405 2.6e-05 33_[+2]_39 chr1:222791437-222791517 2.6e-05 12_[+2]_60 chr9:133568968-133569048 2.6e-05 65_[+2]_7 chr2:74710098-74710178 2.6e-05 37_[+2]_35 chr12:101673874-10167395 2.6e-05 30_[+2]_42 chr2:105654498-105654578 2.6e-05 49_[+2]_23 chr15:69110525-69110605 2.6e-05 54_[+2]_18 chr19:37663730-37663810 2.6e-05 21_[+2]_51 chr11:33060868-33060948 2.6e-05 13_[+2]_59 chr5:130506381-130506461 2.6e-05 34_[+2]_38 chrX:47342061-47342141 2.6e-05 9_[+2]_63 chr16:68877420-68877500 2.6e-05 32_[+2]_40 chr2:201728922-201729002 2.6e-05 53_[+2]_19 chr19:50321431-50321511 2.6e-05 41_[+2]_31 chr2:31456841-31456921 2.6e-05 39_[+2]_33 chr1:90460391-90460471 2.6e-05 35_[+2]_37 chr11:73490508-73490588 2.6e-05 28_[+2]_44 chr10:104220987-10422106 2.6e-05 36_[+2]_36 chr18:23501755-23501835 3.2e-05 40_[+2]_32 chr18:39535005-39535085 3.2e-05 44_[+2]_28 chr20:35374592-35374672 3.2e-05 28_[+2]_44 chr16:57769199-57769279 3.8e-05 17_[+2]_55 chr7:27200671-27200751 6e-05 46_[+2]_26 chr1:35657726-35657806 6.9e-05 8_[+2]_64 chr15:93461228-93461308 0.0001 52_[+2]_20 chrX:152110189-152110269 0.0001 60_[+2]_12 chr19:50379870-50379950 0.00014 37_[+2]_35 chr20:5730946-5731026 0.00014 32_[+2]_40 chr9:131873614-131873694 0.00014 5_[+2]_67 chr15:36871733-36871813 0.00014 32_[+2]_40 chrX:48433232-48433312 0.00015 72_[+2] chr1:110089085-110089165 0.00022 54_[+2]_18 chr2:98612606-98612686 0.00022 50_[+2]_22 chr12:32908772-32908852 0.00022 19_[+2]_53 chr9:124855640-124855720 0.00022 62_[+2]_10 chr19:52408293-52408373 0.00022 20_[+2]_52 chr16:19566853-19566933 0.00025 47_[+2]_25 chr19:7598920-7599000 0.00025 61_[+2]_11 chr19:13044581-13044661 0.00032 39_[+2]_33 chr10:120101783-12010186 0.00032 41_[+2]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAGATGGC width=8 seqs=124 chr19:4007722-4007802 ( 34) AAGATGGC 1 chr2:73441364-73441444 ( 28) AAGATGGC 1 chr11:695776-695856 ( 49) AAGATGGC 1 chr1:150849133-150849213 ( 49) AAGATGGC 1 chr17:3572080-3572160 ( 38) AAGATGGC 1 chr20:44563256-44563336 ( 8) AAGATGGC 1 chr1:161195803-161195883 ( 54) AAGATGGC 1 chr14:102606204-10260628 ( 54) AAGATGGC 1 chr5:134074093-134074173 ( 18) AAGATGGC 1 chr1:156163712-156163792 ( 24) AAGATGGC 1 chr8:20054866-20054946 ( 49) AAGATGGC 1 chr2:48667716-48667796 ( 52) AAGATGGC 1 chr14:23298987-23299067 ( 45) AAGATGGC 1 chr7:94139375-94139455 ( 19) AAGATGGC 1 chr11:119205202-11920528 ( 39) AAGATGGC 1 chr22:46067901-46067981 ( 40) AAGATGGC 1 chr3:51422426-51422506 ( 33) AAGATGGC 1 chr9:123964109-123964189 ( 34) AAGATGGC 1 chr6:41040162-41040242 ( 46) AAGATGGC 1 chr11:74459890-74459970 ( 33) AAGATGGC 1 chr12:124155640-12415572 ( 42) AAGATGGC 1 chr11:34938165-34938245 ( 35) AAGATGGC 1 chr5:1799947-1800027 ( 32) AAGATGGC 1 chr8:145149994-145150074 ( 6) AAGATGGC 1 chr16:30773635-30773715 ( 15) AAGATGGC 1 chr15:79165917-79165997 ( 28) AAGATGGC 1 chr7:152456684-152456764 ( 50) AAGATGGC 1 chr9:139702364-139702444 ( 35) AAGATGGC 1 chr15:93426025-93426105 ( 45) AAGATGGC 1 chr1:155179020-155179100 ( 20) AAGATGGC 1 chr5:134209961-134210041 ( 14) AAGATGGC 1 chr18:54318376-54318456 ( 31) AAGATGGC 1 chr19:52430573-52430653 ( 23) AAGATGGC 1 chr11:62477055-62477135 ( 19) AAGATGGC 1 chr2:28974975-28975055 ( 13) AAGATGGC 1 chr13:50018078-50018158 ( 22) AAGATGGC 1 chr17:71189128-71189208 ( 17) AAGATGGC 1 chr3:19989237-19989317 ( 33) AAGATGGC 1 chr22:38453150-38453230 ( 31) AAGATGGC 1 chr2:242576748-242576828 ( 32) AAGATGGC 1 chrX:30907499-30907579 ( 34) AAGATGGC 1 chr1:161129265-161129345 ( 46) AAGATGGC 1 chr3:185655203-185655283 ( 49) AAGATGGC 1 chr2:74055922-74056002 ( 12) AAGATGGC 1 chr3:53916186-53916266 ( 44) AAGATGGC 1 chr9:32552290-32552370 ( 47) AAGATGGC 1 chr1:154297867-154297947 ( 51) AAGATGGC 1 chr1:43149947-43150027 ( 47) AAGATGGC 1 chr10:105127703-10512778 ( 41) AAGATGGC 1 chr8:145515254-145515334 ( 38) AAGATGGC 1 chr5:174905973-174906053 ( 25) AAGATGGC 1 chr19:49127369-49127449 ( 13) AAGATGGC 1 chr6:6737584-6737664 ( 39) AAGATGGC 1 chr22:50312049-50312129 ( 33) AAGATGGC 1 chrX:47225775-47225855 ( 21) AAGATGGC 1 chr19:52511480-52511560 ( 14) AAGATGGC 1 chr10:104678259-10467833 ( 54) AAGATGGC 1 chr8:120885975-120886055 ( 15) AAGATGGC 1 chr11:67980734-67980814 ( 25) AAGATGGC 1 chr1:161190640-161190720 ( 45) AAGATGGC 1 chr1:155658070-155658150 ( 36) AAAATGGC 1 chr19:8509854-8509934 ( 26) AAAATGGC 1 chr11:66886724-66886804 ( 31) AAAATGGC 1 chr5:140937514-140937594 ( 34) AAAATGGC 1 chr1:46152177-46152257 ( 18) AAAATGGC 1 chr2:67624431-67624511 ( 41) AAAATGGC 1 chr14:31494829-31494909 ( 36) AAAATGGC 1 chr16:9057697-9057777 ( 43) AAAATGGC 1 chr19:52490168-52490248 ( 23) AAAATGGC 1 chr12:14538184-14538264 ( 66) AAAATGGC 1 chr2:64751252-64751332 ( 44) AAAATGGC 1 chr1:78245221-78245301 ( 8) AAAATGGC 1 chr10:121356148-12135622 ( 34) AAAATGGC 1 chr11:67250486-67250566 ( 35) AAAATGGC 1 chrX:47180872-47180952 ( 13) AAAATGGC 1 chr16:30546254-30546334 ( 33) AAAATGGC 1 chr3:179065377-179065457 ( 33) AAAATGGC 1 chr19:49990535-49990615 ( 10) AACATGGC 1 chr5:147763379-147763459 ( 29) AACATGGC 1 chr3:66271410-66271490 ( 29) AACATGGC 1 chr4:128554089-128554169 ( 29) AACATGGC 1 chr11:45376918-45376998 ( 40) AACATGGC 1 chr2:24583334-24583414 ( 51) AACATGGC 1 chr20:34042823-34042903 ( 25) AACATGGC 1 chr1:27114325-27114405 ( 34) AACATGGC 1 chr1:222791437-222791517 ( 13) AACATGGC 1 chr9:133568968-133569048 ( 66) AACATGGC 1 chr2:74710098-74710178 ( 38) AACATGGC 1 chr12:101673874-10167395 ( 31) AACATGGC 1 chr2:105654498-105654578 ( 50) AACATGGC 1 chr15:69110525-69110605 ( 55) AACATGGC 1 chr19:37663730-37663810 ( 22) AACATGGC 1 chr11:33060868-33060948 ( 14) AACATGGC 1 chr5:130506381-130506461 ( 35) AACATGGC 1 chrX:47342061-47342141 ( 10) AACATGGC 1 chr16:68877420-68877500 ( 33) AACATGGC 1 chr2:201728922-201729002 ( 54) AACATGGC 1 chr19:50321431-50321511 ( 42) AACATGGC 1 chr2:31456841-31456921 ( 40) AACATGGC 1 chr1:90460391-90460471 ( 36) AACATGGC 1 chr11:73490508-73490588 ( 29) AACATGGC 1 chr10:104220987-10422106 ( 37) AACATGGC 1 chr18:23501755-23501835 ( 41) AAGATGGT 1 chr18:39535005-39535085 ( 45) AAGATGGT 1 chr20:35374592-35374672 ( 29) AAGATGGT 1 chr16:57769199-57769279 ( 18) AAGATGGA 1 chr7:27200671-27200751 ( 47) GAGATGGC 1 chr1:35657726-35657806 ( 9) AAAATGGA 1 chr15:93461228-93461308 ( 53) GAAATGGC 1 chrX:152110189-152110269 ( 61) GAAATGGC 1 chr19:50379870-50379950 ( 38) GACATGGC 1 chr20:5730946-5731026 ( 33) AGGATGGC 1 chr9:131873614-131873694 ( 6) GACATGGC 1 chr15:36871733-36871813 ( 33) GACATGGC 1 chrX:48433232-48433312 ( 73) AAAATGAC 1 chr1:110089085-110089165 ( 55) AACATTGC 1 chr2:98612606-98612686 ( 51) ATGATGGC 1 chr12:32908772-32908852 ( 20) AAGATGGG 1 chr9:124855640-124855720 ( 63) AAGAGGGC 1 chr19:52408293-52408373 ( 21) AACATGTC 1 chr16:19566853-19566933 ( 48) AGCATGGC 1 chr19:7598920-7599000 ( 62) AGCATGGC 1 chr19:13044581-13044661 ( 40) AACAGGGC 1 chr10:120101783-12010186 ( 42) AACATCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.90166 E= 6.2e-198 246 -1360 -274 -1360 248 -1360 -374 -446 -4 -24 78 -1360 253 -1360 -1360 -1360 -1360 -1360 -433 247 -1360 -533 160 -446 -442 -1360 160 -446 -343 155 -532 -288 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 124 E= 6.2e-198 0.951613 0.000000 0.048387 0.000000 0.967742 0.000000 0.024194 0.008065 0.169355 0.274194 0.556452 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016129 0.983871 0.000000 0.008065 0.983871 0.008065 0.008065 0.000000 0.983871 0.008065 0.016129 0.951613 0.008065 0.024194 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGATGGC MEME-2 regular expression -------------------------------------------------------------------------------- AA[GC]ATGGC -------------------------------------------------------------------------------- Time 8.13 secs. ******************************************************************************** ******************************************************************************** MOTIF TTSBCTYC MEME-3 width = 8 sites = 26 llr = 227 E-value = 1.5e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C ::42a:4a probability G ::43:::: matrix T aa24:a6: bits 2.5 ** * 2.3 ** * 2.0 ** * 1.8 ** * Relative 1.5 ** ** * Entropy 1.3 ** **** (12.6 bits) 1.0 ** **** 0.8 ** **** 0.5 ** ***** 0.3 ******** 0.0 -------- Multilevel TTCTCTTC consensus GG C sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:153237007-153237087 63 6.13e-06 TTCCCCCCTA TTCTCTTC CTCCTAGGTC chr19:52408293-52408373 5 6.13e-06 GGGC TTCTCTTC GAGGAGGTAA chr5:130506381-130506461 59 6.13e-06 GTGATTTCCG TTCTCTTC TGGCCAGTAA chr22:30820009-30820089 26 1.22e-05 AGCTGGTGGG TTGTCTTC CGCCATCTTT chr11:64052909-64052989 60 1.56e-05 TGGGCGGAAG TTTTCTTC AGAGACCGAG chrX:63615377-63615457 72 1.56e-05 GCAAGTGCCC TTTTCTTC G chr11:45376918-45376998 72 2.68e-05 GCGCCCAATT TTCGCTTC C chr8:145149994-145150074 26 2.68e-05 CAGCTGCGGC TTCGCTTC GCGGGGTAGT chr1:155189474-155189554 58 4.91e-05 TAAAGGGCAA TTGGCTTC CAGATGCAGA chr1:78245221-78245301 72 4.91e-05 CCCCTCCACT TTCTCTCC A chr11:67250486-67250566 16 4.91e-05 TCAGTCCCTT TTGGCTTC TGCCCTCAAC chr16:30546254-30546334 13 4.91e-05 CCAGGCCCAG TTCTCTCC TTGCCCTAAT chr12:101673874-10167395 23 6.64e-05 AGGCTCCTCC TTGTCTCC AACATGGCGG chr9:101018092-101018172 12 7.25e-05 GCTTCCGGCT TTTTCTCC GCGCCAGTCA chr18:54318376-54318456 68 7.25e-05 ACAGCTGGCC TTTTCTCC ACTTT chr9:133568968-133569048 31 8.37e-05 CTCGGCTCCC TTCCCTTC GGGTTCGCCT chr3:19989237-19989317 23 8.37e-05 GTGTCACCCT TTCCCTTC TCAAGATGGC chr10:104192355-10419243 22 8.37e-05 CCCAGAGCGG TTCCCTTC CAGAGGCGCC chr3:179065377-179065457 14 9.49e-05 ACAACAAACC TTGCCTTC TGCCCTTAAG chr15:36871733-36871813 47 9.49e-05 TGGCGGCTAG TTGCCTTC GGCGCACCAC chr2:74055922-74056002 30 1.21e-04 CGCTGTGTCG TTCGCTCC TCATTGGTCG chr10:120101783-12010186 59 1.42e-04 CGCCTTCTCA TTGGCTCC TGCGTCTCAA chrX:54071041-54071121 62 1.42e-04 AGGCAGACGT TTGGCTCC ATTTTGAGTG chr19:52511480-52511560 37 1.42e-04 CCTCGTCGCC TTGGCTCC ATGGGGGCCG chr11:62414036-62414116 47 1.53e-04 TTGTGCAGAG TTTGCTCC TTGACCCCAA chr19:12886440-12886520 24 1.94e-04 ACGCCCGCTC TTGCCTCC AGCCCCGCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:153237007-153237087 6.1e-06 62_[+3]_10 chr19:52408293-52408373 6.1e-06 4_[+3]_68 chr5:130506381-130506461 6.1e-06 58_[+3]_14 chr22:30820009-30820089 1.2e-05 25_[+3]_47 chr11:64052909-64052989 1.6e-05 59_[+3]_13 chrX:63615377-63615457 1.6e-05 71_[+3]_1 chr11:45376918-45376998 2.7e-05 71_[+3]_1 chr8:145149994-145150074 2.7e-05 25_[+3]_47 chr1:155189474-155189554 4.9e-05 57_[+3]_15 chr1:78245221-78245301 4.9e-05 71_[+3]_1 chr11:67250486-67250566 4.9e-05 15_[+3]_57 chr16:30546254-30546334 4.9e-05 12_[+3]_60 chr12:101673874-10167395 6.6e-05 22_[+3]_50 chr9:101018092-101018172 7.3e-05 11_[+3]_61 chr18:54318376-54318456 7.3e-05 67_[+3]_5 chr9:133568968-133569048 8.4e-05 30_[+3]_42 chr3:19989237-19989317 8.4e-05 22_[+3]_50 chr10:104192355-10419243 8.4e-05 21_[+3]_51 chr3:179065377-179065457 9.5e-05 13_[+3]_59 chr15:36871733-36871813 9.5e-05 46_[+3]_26 chr2:74055922-74056002 0.00012 29_[+3]_43 chr10:120101783-12010186 0.00014 58_[+3]_14 chrX:54071041-54071121 0.00014 61_[+3]_11 chr19:52511480-52511560 0.00014 36_[+3]_36 chr11:62414036-62414116 0.00015 46_[+3]_26 chr19:12886440-12886520 0.00019 23_[+3]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTSBCTYC width=8 seqs=26 chrX:153237007-153237087 ( 63) TTCTCTTC 1 chr19:52408293-52408373 ( 5) TTCTCTTC 1 chr5:130506381-130506461 ( 59) TTCTCTTC 1 chr22:30820009-30820089 ( 26) TTGTCTTC 1 chr11:64052909-64052989 ( 60) TTTTCTTC 1 chrX:63615377-63615457 ( 72) TTTTCTTC 1 chr11:45376918-45376998 ( 72) TTCGCTTC 1 chr8:145149994-145150074 ( 26) TTCGCTTC 1 chr1:155189474-155189554 ( 58) TTGGCTTC 1 chr1:78245221-78245301 ( 72) TTCTCTCC 1 chr11:67250486-67250566 ( 16) TTGGCTTC 1 chr16:30546254-30546334 ( 13) TTCTCTCC 1 chr12:101673874-10167395 ( 23) TTGTCTCC 1 chr9:101018092-101018172 ( 12) TTTTCTCC 1 chr18:54318376-54318456 ( 68) TTTTCTCC 1 chr9:133568968-133569048 ( 31) TTCCCTTC 1 chr3:19989237-19989317 ( 23) TTCCCTTC 1 chr10:104192355-10419243 ( 22) TTCCCTTC 1 chr3:179065377-179065457 ( 14) TTGCCTTC 1 chr15:36871733-36871813 ( 47) TTGCCTTC 1 chr2:74055922-74056002 ( 30) TTCGCTCC 1 chr10:120101783-12010186 ( 59) TTGGCTCC 1 chrX:54071041-54071121 ( 62) TTGGCTCC 1 chr19:52511480-52511560 ( 37) TTGGCTCC 1 chr11:62414036-62414116 ( 47) TTTGCTCC 1 chr19:12886440-12886520 ( 24) TTGCCTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.98426 E= 1.5e+001 -1134 -1134 -1134 249 -1134 -1134 -1134 249 -1134 38 25 11 -1134 -49 9 125 -1134 162 -1134 -1134 -1134 -1134 -1134 249 -1134 38 -1134 170 -1134 162 -1134 -1134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 1.5e+001 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.423077 0.384615 0.192308 0.000000 0.230769 0.346154 0.423077 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.423077 0.000000 0.576923 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSBCTYC MEME-3 regular expression -------------------------------------------------------------------------------- TT[CG][TGC]CT[TC]C -------------------------------------------------------------------------------- Time 11.47 secs. ******************************************************************************** ******************************************************************************** MOTIF AAARTGAA MEME-4 width = 8 sites = 12 llr = 121 E-value = 6.2e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A aaa7:389 pos.-specific C ::::2::: probability G :::3382: matrix T ::::6::1 bits 2.5 *** 2.3 *** 2.0 *** * 1.8 *** ** Relative 1.5 *** ** Entropy 1.3 **** ** (14.5 bits) 1.0 **** *** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AAAATGAA consensus GGA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:19600093-19600173 50 1.60e-06 CTCCCTTCTC AAAATGAA GGCTGCGTGT chr16:19566853-19566933 5 1.60e-06 GCTG AAAATGAA GCCTGTGCTG chr15:93461228-93461308 36 2.46e-06 GTAAGTTAGC AAAATAAA CACTAAAGTG chr2:64751252-64751332 16 8.35e-06 GCAAGGAAGT AAAAGGAA AGGGCAGCTT chr10:121632439-12163251 61 8.35e-06 GGAGACGGGC AAAAGGAA GGGCACGCAG chr10:104678259-10467833 6 1.29e-05 AACCC AAAGTAAA GATGGCGGGC chr18:23501755-23501835 11 1.74e-05 GTGCGAAGGT AAAATGGA CACCCCGTCA chr11:67980734-67980814 6 1.74e-05 AGAGA AAAATGGA GAGTAAAATC chr17:4871072-4871152 61 2.77e-05 GGTGCGTCTT AAAGGGAA GGGCGGAATG chr10:99639063-99639143 56 2.85e-05 TGTTAAGGGC AAAATAAT GAGCTCACGA chr1:155658070-155658150 25 3.40e-05 TTCCCCTCGC AAAGCGAA CCCAAAATGG chr5:140937514-140937594 69 3.40e-05 GCCAGACAGT AAAGCGAA GGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:19600093-19600173 1.6e-06 49_[+4]_23 chr16:19566853-19566933 1.6e-06 4_[+4]_68 chr15:93461228-93461308 2.5e-06 35_[+4]_37 chr2:64751252-64751332 8.4e-06 15_[+4]_57 chr10:121632439-12163251 8.4e-06 60_[+4]_12 chr10:104678259-10467833 1.3e-05 5_[+4]_67 chr18:23501755-23501835 1.7e-05 10_[+4]_62 chr11:67980734-67980814 1.7e-05 5_[+4]_67 chr17:4871072-4871152 2.8e-05 60_[+4]_12 chr10:99639063-99639143 2.9e-05 55_[+4]_17 chr1:155658070-155658150 3.4e-05 24_[+4]_48 chr5:140937514-140937594 3.4e-05 68_[+4]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAARTGAA width=8 seqs=12 chr19:19600093-19600173 ( 50) AAAATGAA 1 chr16:19566853-19566933 ( 5) AAAATGAA 1 chr15:93461228-93461308 ( 36) AAAATAAA 1 chr2:64751252-64751332 ( 16) AAAAGGAA 1 chr10:121632439-12163251 ( 61) AAAAGGAA 1 chr10:104678259-10467833 ( 6) AAAGTAAA 1 chr18:23501755-23501835 ( 11) AAAATGGA 1 chr11:67980734-67980814 ( 6) AAAATGGA 1 chr17:4871072-4871152 ( 61) AAAGGGAA 1 chr10:99639063-99639143 ( 56) AAAATAAT 1 chr1:155658070-155658150 ( 25) AAAGCGAA 1 chr5:140937514-140937594 ( 69) AAAGCGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.6697 E= 6.2e+001 253 -1023 -1023 -1023 253 -1023 -1023 -1023 253 -1023 -1023 -1023 194 -1023 4 -1023 -1023 -96 -37 171 53 -1023 121 -1023 226 -1023 -96 -1023 240 -1023 -1023 -109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 6.2e+001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 0.000000 0.166667 0.250000 0.583333 0.250000 0.000000 0.750000 0.000000 0.833333 0.000000 0.166667 0.000000 0.916667 0.000000 0.000000 0.083333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAARTGAA MEME-4 regular expression -------------------------------------------------------------------------------- AAA[AG][TG][GA]AA -------------------------------------------------------------------------------- Time 14.77 secs. ******************************************************************************** ******************************************************************************** MOTIF ATAAMAAA MEME-5 width = 8 sites = 2 llr = 26 E-value = 6.8e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a:aa5aaa pos.-specific C ::::5::: probability G :::::::: matrix T :a:::::: bits 2.5 **** *** 2.3 **** *** 2.0 **** *** 1.8 **** *** Relative 1.5 **** *** Entropy 1.3 **** *** (18.7 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATAAAAAA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:5730946-5731026 73 8.60e-07 CACATTTCCC ATAAAAAA chr1:46152177-46152257 1 2.46e-06 . ATAACAAA GCTCTTCCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:5730946-5731026 8.6e-07 72_[+5] chr1:46152177-46152257 2.5e-06 [+5]_72 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATAAMAAA width=8 seqs=2 chr20:5730946-5731026 ( 73) ATAAAAAA 1 chr1:46152177-46152257 ( 1) ATAACAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 6.8e+003 252 -765 -765 -765 -765 -765 -765 249 252 -765 -765 -765 252 -765 -765 -765 152 62 -765 -765 252 -765 -765 -765 252 -765 -765 -765 252 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 6.8e+003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATAAMAAA MEME-5 regular expression -------------------------------------------------------------------------------- ATAA[AC]AAA -------------------------------------------------------------------------------- Time 18.04 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:52552603-52552683 5.57e-03 35_[+1(1.09e-05)]_37 chr1:161190640-161190720 1.33e-02 44_[+2(1.04e-05)]_28 chr3:119187741-119187821 1.40e-01 11_[+1(1.09e-05)]_40_[+1(1.09e-05)]_\ 13 chr11:67980734-67980814 1.68e-05 5_[+4(1.74e-05)]_11_[+2(1.04e-05)]_\ 48 chr9:115818987-115819067 4.09e-02 59_[+1(1.09e-05)]_13 chr8:120885975-120886055 2.24e-02 14_[+2(1.04e-05)]_58 chr10:104678259-10467833 2.35e-04 11_[+2(1.04e-05)]_34_[+2(1.04e-05)]_\ 19 chr19:52511480-52511560 9.22e-06 13_[+2(1.04e-05)]_32_[+1(1.09e-05)]_\ 19 chr15:36871733-36871813 1.38e-02 46_[+3(9.49e-05)]_26 chr5:176981593-176981673 1.67e-02 63_[+1(1.69e-05)]_9 chr19:7598920-7599000 4.58e-01 80 chr22:38577998-38578078 1.76e-01 43_[+1(2.78e-05)]_29 chrX:47225775-47225855 7.32e-04 20_[+2(1.04e-05)]_27_[+1(3.36e-05)]_\ 17 chr22:50312049-50312129 4.44e-02 32_[+2(1.04e-05)]_40 chr10:104220987-10422106 1.69e-02 36_[+2(2.63e-05)]_36 chr20:35374592-35374672 5.40e-04 28_[+2(3.20e-05)]_25_[+1(1.09e-05)]_\ 11 chr6:6737584-6737664 1.29e-02 38_[+2(1.04e-05)]_34 chr11:73490508-73490588 3.34e-02 28_[+2(2.63e-05)]_44 chr9:131873614-131873694 1.24e-01 80 chr19:12886440-12886520 9.73e-03 37_[+1(1.09e-05)]_35 chr19:49127369-49127449 3.10e-04 12_[+2(1.04e-05)]_60 chr1:90460391-90460471 4.46e-03 35_[+2(2.63e-05)]_37 chr10:99639063-99639143 3.17e-04 37_[+1(1.09e-05)]_10_[+4(2.85e-05)]_\ 17 chrX:63615377-63615457 1.26e-03 45_[+1(1.09e-05)]_18_[+3(1.56e-05)]_\ 1 chr10:104192355-10419243 5.58e-04 21_[+3(8.37e-05)]_16_[+1(2.78e-05)]_\ 27 chr3:179065377-179065457 9.53e-06 3_[+5(8.66e-05)]_2_[+3(9.49e-05)]_\ 11_[+2(1.59e-05)]_40 chr17:4270071-4270151 3.46e-03 1_[+1(1.69e-05)]_60_[+5(8.66e-05)]_\ 3 chr5:174905973-174906053 1.91e-02 24_[+2(1.04e-05)]_48 chr2:31456841-31456921 2.91e-02 39_[+2(2.63e-05)]_33 chr8:145515254-145515334 1.74e-02 37_[+2(1.04e-05)]_35 chr10:99393276-99393356 5.56e-02 63_[+1(1.09e-05)]_9 chr10:105127703-10512778 2.08e-02 40_[+2(1.04e-05)]_32 chr17:65855-65935 8.19e-01 80 chr19:50321431-50321511 4.70e-03 41_[+2(2.63e-05)]_31 chr1:43149947-43150027 6.66e-03 46_[+2(1.04e-05)]_26 chr2:201728922-201729002 9.81e-04 22_[+1(1.09e-05)]_23_[+2(2.63e-05)]_\ 19 chr1:154297867-154297947 1.63e-02 50_[+2(1.04e-05)]_22 chr6:74363763-74363843 2.70e-02 27_[+1(1.09e-05)]_45 chr10:123687579-12368765 1.27e-01 56_[+1(1.09e-05)]_16 chr10:121632439-12163251 9.14e-05 42_[+1(1.09e-05)]_10_[+4(8.35e-06)]_\ 12 chr9:32552290-32552370 7.97e-03 46_[+2(1.04e-05)]_26 chr1:2457986-2458066 1.30e-02 35_[+1(1.69e-05)]_37 chr16:30546254-30546334 1.25e-05 12_[+3(4.91e-05)]_12_[+2(1.59e-05)]_\ 40 chr17:1359571-1359651 6.74e-01 80 chr3:53916186-53916266 5.34e-02 43_[+2(1.04e-05)]_29 chr2:27357616-27357696 7.10e-02 39_[+1(1.69e-05)]_33 chr16:68877420-68877500 7.47e-02 32_[+2(2.63e-05)]_40 chr2:74055922-74056002 2.09e-03 11_[+2(1.04e-05)]_61 chr12:72058010-72058090 1.09e-02 7_[+1(2.78e-05)]_65 chr3:185655203-185655283 4.32e-04 7_[+1(1.69e-05)]_33_[+2(1.04e-05)]_\ 24 chr11:10879301-10879381 4.04e-02 32_[+1(1.09e-05)]_40 chr20:5730946-5731026 4.81e-05 72_[+5(8.60e-07)] chr6:33539144-33539224 2.36e-02 58_[+1(1.09e-05)]_14 chr1:161129265-161129345 1.05e-02 45_[+2(1.04e-05)]_27 chrX:30907499-30907579 1.21e-02 33_[+2(1.04e-05)]_39 chrX:47342061-47342141 2.38e-04 9_[+2(2.63e-05)]_30_[+1(1.09e-05)]_\ 25 chr2:242576748-242576828 6.40e-02 31_[+2(1.04e-05)]_41 chrX:152127448-152127528 1.70e-01 80 chr1:35657726-35657806 1.46e-05 8_[+4(1.74e-05)]_37_[+1(1.09e-05)]_\ 19 chr1:6685210-6685290 4.91e-02 32_[+1(1.09e-05)]_40 chr22:38453150-38453230 1.93e-02 30_[+2(1.04e-05)]_42 chr14:70234389-70234469 5.30e-02 3_[+1(1.69e-05)]_69 chr17:42767076-42767156 6.74e-02 40_[+1(1.09e-05)]_32 chrX:47696103-47696183 1.15e-01 4_[+1(2.78e-05)]_68 chr3:19989237-19989317 2.59e-04 22_[+3(8.37e-05)]_2_[+2(1.04e-05)]_\ 40 chrX:47180872-47180952 6.76e-06 12_[+2(1.59e-05)]_31_[+1(2.78e-05)]_\ 21 chr12:110434195-11043427 8.53e-04 51_[+1(1.09e-05)]_21 chr5:130506381-130506461 1.01e-04 34_[+2(2.63e-05)]_16_[+3(6.13e-06)]_\ 14 chr11:67250486-67250566 4.17e-05 15_[+3(4.91e-05)]_11_[+2(1.59e-05)]_\ 38 chr17:71189128-71189208 1.69e-02 16_[+2(1.04e-05)]_56 chr13:50018078-50018158 2.54e-02 21_[+2(1.04e-05)]_51 chr18:39535005-39535085 8.34e-03 44_[+2(3.20e-05)]_28 chr2:28974975-28975055 1.27e-02 12_[+2(1.04e-05)]_60 chrX:1021106-1021186 2.64e-02 7_[+1(1.09e-05)]_14_[+1(1.09e-05)]_\ 14_[+1(1.09e-05)]_21 chr19:13067981-13068061 6.60e-02 40_[+1(1.09e-05)]_32 chr17:2415125-2415205 1.52e-03 47_[+1(1.09e-05)]_25 chr10:121356148-12135622 2.60e-03 33_[+2(1.59e-05)]_39 chr19:52408293-52408373 2.27e-05 4_[+3(6.13e-06)]_46_[+1(1.09e-05)]_\ 14 chr11:33060868-33060948 3.27e-02 13_[+2(2.63e-05)]_59 chr11:62477055-62477135 2.51e-02 18_[+2(1.04e-05)]_6_[+2(2.63e-05)]_\ 40 chr19:37663730-37663810 1.35e-04 21_[+2(2.63e-05)]_31_[+1(1.69e-05)]_\ 12 chr20:34329549-34329629 6.84e-02 49_[+1(2.78e-05)]_23 chr19:52552118-52552198 3.60e-02 39_[+1(1.09e-05)]_33 chr9:130477993-130478073 7.76e-01 80 chr15:69110525-69110605 7.55e-02 54_[+2(2.63e-05)]_18 chr14:100706284-10070636 1.42e-03 28_[+1(2.78e-05)]_20_[+1(1.09e-05)]_\ 16 chr10:70092221-70092301 2.07e-02 34_[+1(1.69e-05)]_38 chr19:52430573-52430653 8.55e-03 22_[+2(1.04e-05)]_50 chr18:54318376-54318456 6.92e-05 30_[+2(1.04e-05)]_29_[+3(7.25e-05)]_\ 5 chr19:50316879-50316959 7.40e-01 80 chr5:134209961-134210041 3.66e-02 13_[+2(1.04e-05)]_23_[+2(1.04e-05)]_\ 28 chr1:155179020-155179100 4.87e-02 19_[+2(1.04e-05)]_53 chr15:93426025-93426105 2.92e-02 44_[+2(1.04e-05)]_28 chrX:24168513-24168593 8.78e-02 42_[+1(9.41e-05)]_30 chr9:139702364-139702444 1.34e-02 34_[+2(1.04e-05)]_38 chr16:5558567-5558647 2.55e-01 80 chr19:56135880-56135960 7.07e-02 42_[+1(1.09e-05)]_30 chr15:40674997-40675077 7.44e-01 80 chr16:19566853-19566933 6.99e-04 4_[+4(1.60e-06)]_68 chr3:125314450-125314530 2.24e-02 36_[+1(1.09e-05)]_36 chr7:152456684-152456764 1.69e-02 49_[+2(1.04e-05)]_23 chr19:59070462-59070542 1.56e-02 40_[+1(1.09e-05)]_32 chr18:23501755-23501835 6.89e-05 10_[+4(1.74e-05)]_22_[+2(3.20e-05)]_\ 32 chr12:121148238-12114831 4.50e-02 19_[+1(1.09e-05)]_53 chr22:24059540-24059620 8.84e-02 55_[+1(1.09e-05)]_17 chr1:78245221-78245301 7.50e-06 7_[+2(1.59e-05)]_56_[+3(4.91e-05)]_\ 1 chr4:186346872-186346952 9.35e-02 33_[+1(1.09e-05)]_39 chr7:43909032-43909112 5.02e-02 57_[+1(1.09e-05)]_15 chr12:117628214-11762829 8.53e-02 42_[+1(1.09e-05)]_30 chr10:71267712-71267792 9.63e-01 80 chr2:62733016-62733096 2.98e-02 55_[+1(1.69e-05)]_17 chr18:55297479-55297559 8.94e-03 35_[+1(2.78e-05)]_37 chr11:64052909-64052989 9.63e-04 36_[+1(1.09e-05)]_15_[+3(1.56e-05)]_\ 13 chr3:194991821-194991901 2.00e-01 80 chr7:149117-149197 9.22e-01 80 chr15:79165917-79165997 1.72e-04 13_[+2(1.59e-05)]_6_[+2(1.04e-05)]_\ 3_[+1(5.94e-05)]_34 chr1:155189474-155189554 3.87e-04 57_[+3(4.91e-05)]_15 chr6:37467737-37467817 4.59e-02 28_[+1(1.09e-05)]_27_[+1(8.03e-05)]_\ 9 chr3:56716881-56716961 6.51e-02 30_[+1(1.69e-05)]_42 chr22:30820009-30820089 2.02e-04 25_[+3(1.22e-05)]_1_[+1(1.09e-05)]_\ 38 chr11:107436390-10743647 3.24e-02 53_[+1(2.78e-05)]_19 chr20:3762018-3762098 1.74e-02 62_[+1(3.36e-05)]_10 chr2:64751252-64751332 1.57e-04 15_[+4(8.35e-06)]_20_[+2(1.59e-05)]_\ 29 chr2:105654498-105654578 7.21e-02 49_[+2(2.63e-05)]_23 chr12:101673874-10167395 5.06e-04 22_[+3(6.64e-05)]_[+2(2.63e-05)]_42 chr16:30773635-30773715 1.58e-02 14_[+2(1.04e-05)]_58 chr8:145149994-145150074 3.98e-04 5_[+2(1.04e-05)]_12_[+3(2.68e-05)]_\ 47 chr20:2821256-2821336 4.34e-01 80 chr16:29827280-29827360 9.65e-02 27_[+1(1.09e-05)]_45 chr14:88459563-88459643 1.68e-01 40_[+1(1.69e-05)]_32 chrX:77041662-77041742 6.83e-03 21_[+1(1.69e-05)]_51 chr5:1799947-1800027 7.14e-02 31_[+2(1.04e-05)]_41 chr5:133561206-133561286 3.59e-02 31_[+1(1.69e-05)]_41 chr19:1021060-1021140 2.00e-02 44_[+1(1.09e-05)]_28 chr11:34938165-34938245 5.58e-02 34_[+2(1.04e-05)]_38 chr5:139682604-139682684 8.60e-03 49_[+1(1.09e-05)]_23 chr12:14538184-14538264 2.82e-05 18_[+1(1.09e-05)]_39_[+2(1.59e-05)]_\ 7 chr19:52490168-52490248 2.26e-05 22_[+2(1.59e-05)]_29_[+1(2.78e-05)]_\ 13 chr12:124155640-12415572 5.57e-03 41_[+2(1.04e-05)]_31 chr15:41836396-41836476 1.18e-02 44_[+1(1.09e-05)]_28 chr5:170814466-170814546 6.70e-02 28_[+1(1.69e-05)]_44 chr9:124855640-124855720 1.02e-02 52_[+1(2.78e-05)]_20 chr20:10415753-10415833 1.06e-02 29_[+1(1.69e-05)]_43 chr6:149364796-149364876 7.69e-03 34_[+1(1.09e-05)]_38 chrX:153237007-153237087 9.49e-04 29_[+1(1.09e-05)]_25_[+3(6.13e-06)]_\ 10 chr16:9057697-9057777 6.04e-03 42_[+2(1.59e-05)]_30 chr8:95835477-95835557 1.08e-01 37_[+1(1.69e-05)]_35 chr11:74459890-74459970 2.03e-03 32_[+2(1.04e-05)]_40 chr6:41040162-41040242 2.25e-02 45_[+2(1.04e-05)]_27 chr19:50379870-50379950 1.45e-02 80 chr9:123964109-123964189 1.66e-02 33_[+2(1.04e-05)]_39 chr11:62414036-62414116 5.01e-03 30_[+1(1.09e-05)]_42 chr14:103851694-10385177 2.45e-03 49_[+1(1.09e-05)]_23 chr8:145748138-145748218 9.31e-01 80 chr19:38826380-38826460 1.41e-02 59_[+1(1.69e-05)]_13 chr3:101396078-101396158 4.12e-02 22_[+1(6.26e-05)]_50 chr3:51422426-51422506 7.15e-03 32_[+2(1.04e-05)]_40 chr12:30848860-30848940 6.51e-02 80 chrX:152110189-152110269 2.74e-03 55_[+4(5.44e-06)]_17 chr22:46067901-46067981 4.62e-02 39_[+2(1.04e-05)]_33 chr11:119205202-11920528 1.91e-02 38_[+2(1.04e-05)]_34 chr12:32908772-32908852 3.75e-04 31_[+1(1.09e-05)]_41 chr9:101018092-101018172 1.44e-03 11_[+3(7.25e-05)]_10_[+1(1.09e-05)]_\ 43 chr2:98612606-98612686 8.07e-02 80 chr3:122102010-122102090 5.38e-02 56_[+1(3.36e-05)]_16 chr19:41870179-41870259 9.88e-03 34_[+1(1.69e-05)]_18_[+1(2.78e-05)]_\ 12 chr16:57769199-57769279 3.25e-03 17_[+2(3.76e-05)]_55 chr7:94139375-94139455 2.45e-02 18_[+2(1.04e-05)]_54 chr2:74710098-74710178 1.57e-03 37_[+2(2.63e-05)]_35 chr7:5553459-5553539 3.50e-02 33_[+1(2.78e-05)]_39 chr9:139667919-139667999 1.08e-02 20_[+1(2.78e-05)]_52 chr14:23298987-23299067 2.30e-03 10_[+2(1.04e-05)]_26_[+2(1.04e-05)]_\ 28 chr7:156195075-156195155 5.47e-02 43_[+1(1.09e-05)]_29 chr17:40021594-40021674 8.30e-02 24_[+1(1.09e-05)]_48 chr9:133568968-133569048 9.36e-05 30_[+3(8.37e-05)]_27_[+2(2.63e-05)]_\ 7 chr1:222791437-222791517 7.39e-02 12_[+2(2.63e-05)]_60 chr16:5083869-5083949 9.50e-02 41_[+1(3.36e-05)]_31 chr6:33168540-33168620 5.88e-03 59_[+1(3.36e-05)]_13 chr1:27114325-27114405 8.56e-02 33_[+2(2.63e-05)]_39 chr1:161719557-161719637 5.50e-03 31_[+1(2.78e-05)]_41 chrX:54071041-54071121 7.48e-03 38_[+1(1.09e-05)]_20_[+1(4.87e-05)]_\ 6 chr14:31494829-31494909 1.34e-04 35_[+2(1.59e-05)]_37 chr2:48667716-48667796 7.20e-05 31_[+1(1.09e-05)]_12_[+2(1.04e-05)]_\ 21 chr8:20054866-20054946 8.46e-03 48_[+2(1.04e-05)]_24 chr19:19600093-19600173 1.47e-06 9_[+1(4.87e-05)]_32_[+4(1.60e-06)]_\ 23 chr1:156163712-156163792 9.75e-03 23_[+2(1.04e-05)]_49 chr16:1020922-1021002 4.59e-01 80 chr6:127588411-127588491 3.94e-01 80 chr11:124670247-12467032 5.61e-02 24_[+1(1.09e-05)]_48 chr22:49448236-49448316 5.19e-02 47_[+1(1.09e-05)]_25 chrX:48455837-48455917 1.43e-02 59_[+1(1.09e-05)]_13 chr19:37019511-37019591 3.08e-02 53_[+1(1.09e-05)]_19 chr8:6264137-6264217 3.08e-01 80 chr4:147443059-147443139 5.32e-02 80 chr5:134074093-134074173 2.71e-02 17_[+2(1.04e-05)]_55 chr4:177116682-177116762 1.69e-01 80 chr17:4871072-4871152 1.81e-04 22_[+1(1.09e-05)]_30_[+4(2.77e-05)]_\ 12 chr2:67624431-67624511 1.31e-02 40_[+2(1.59e-05)]_32 chr1:46152177-46152257 2.46e-05 [+5(2.46e-06)]_9_[+2(1.59e-05)]_55 chr14:102606204-10260628 2.01e-02 53_[+2(1.04e-05)]_19 chr18:55289097-55289177 2.17e-02 45_[+1(1.09e-05)]_27 chrX:153236549-153236629 9.88e-02 69_[+1(1.09e-05)]_3 chr21:47744314-47744394 5.79e-02 47_[+1(1.09e-05)]_25 chr20:34042823-34042903 1.45e-02 24_[+2(2.63e-05)]_48 chr1:97187329-97187409 2.82e-02 14_[+1(1.69e-05)]_58 chr2:75873884-75873964 6.01e-01 80 chr1:161195803-161195883 9.67e-04 53_[+2(1.04e-05)]_10_[+2(9.11e-05)]_\ 1 chr2:24583334-24583414 3.62e-02 50_[+2(2.63e-05)]_22 chr7:74489575-74489655 6.24e-02 32_[+1(1.09e-05)]_40 chr7:27200671-27200751 3.13e-03 10_[+1(4.87e-05)]_28_[+2(5.99e-05)]_\ 26 chr20:40322141-40322221 1.20e-02 52_[+1(4.87e-05)]_20 chr2:242255025-242255105 2.11e-04 30_[+1(1.09e-05)]_42 chr1:160254889-160254969 1.22e-01 20_[+1(1.09e-05)]_52 chr11:10830147-10830227 1.46e-02 17_[+1(1.69e-05)]_33_[+1(1.69e-05)]_\ 14 chr10:120101783-12010186 1.11e-04 22_[+1(1.09e-05)]_50 chr17:61904465-61904545 3.72e-02 49_[+1(1.69e-05)]_23 chr17:74732606-74732686 2.11e-01 20_[+1(6.85e-05)]_52 chr5:140937514-140937594 3.68e-04 19_[+4(8.20e-05)]_6_[+2(1.59e-05)]_\ 27_[+4(3.40e-05)]_4 chr11:45376918-45376998 6.30e-04 39_[+2(2.63e-05)]_24_[+3(2.68e-05)]_\ 1 chr20:44563256-44563336 7.58e-02 7_[+2(1.04e-05)]_65 chr11:66886724-66886804 1.11e-02 30_[+2(1.59e-05)]_42 chr15:41624720-41624800 1.26e-02 34_[+1(1.09e-05)]_38 chr10:38265585-38265665 4.22e-02 60_[+1(3.96e-05)]_12 chr1:213189201-213189281 7.00e-01 80 chr17:3572080-3572160 3.94e-03 37_[+2(1.04e-05)]_35 chr4:128554089-128554169 3.74e-02 28_[+2(2.63e-05)]_44 chr3:66271410-66271490 3.67e-03 28_[+2(2.63e-05)]_44 chr1:150849133-150849213 1.52e-02 48_[+2(1.04e-05)]_24 chr11:695776-695856 7.96e-02 48_[+2(1.04e-05)]_24 chrX:53710719-53710799 7.18e-02 35_[+1(1.09e-05)]_37 chrX:48433232-48433312 9.50e-05 11_[+1(1.09e-05)]_61 chr9:139137601-139137681 1.37e-01 43_[+1(2.78e-05)]_29 chr15:93461228-93461308 3.33e-07 17_[+1(1.69e-05)]_10_[+4(2.46e-06)]_\ 4_[+4(5.44e-06)]_25 chr19:13044581-13044661 3.45e-03 13_[+1(1.09e-05)]_59 chr18:9914588-9914668 1.34e-01 21_[+1(1.09e-05)]_51 chr17:74099892-74099972 1.72e-02 56_[+1(1.69e-05)]_16 chr2:73441364-73441444 3.26e-03 27_[+2(1.04e-05)]_45 chr1:228270380-228270460 1.19e-03 34_[+1(1.09e-05)]_38 chr19:10426632-10426712 4.80e-01 80 chr19:4007722-4007802 6.80e-03 33_[+2(1.04e-05)]_39 chr1:111505920-111506000 1.91e-03 31_[+1(1.09e-05)]_41 chr5:147763379-147763459 8.51e-03 28_[+2(2.63e-05)]_44 chr11:73472418-73472498 6.38e-03 80 chr9:131084732-131084812 2.09e-02 38_[+1(2.78e-05)]_34 chr1:223886059-223886139 2.27e-03 57_[+1(1.69e-05)]_15 chr1:110089085-110089165 1.34e-04 68_[+1(1.69e-05)]_4 chr15:40213194-40213274 2.47e-02 34_[+1(1.09e-05)]_38 chr19:49990535-49990615 1.62e-02 9_[+2(2.63e-05)]_63 chr19:8509854-8509934 5.67e-03 25_[+2(1.59e-05)]_47 chr1:155658070-155658150 4.27e-04 24_[+4(3.40e-05)]_3_[+2(1.59e-05)]_\ 37 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************