******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/XRCC5.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr22:23298186-23298266 1.0000 80 chr22:22936633-22936713 1.0000 80 chr22:23301537-23301617 1.0000 80 chr22:23053347-23053427 1.0000 80 chr20:26189575-26189655 1.0000 80 chr1:6550056-6550136 1.0000 80 chr7:105683369-105683449 1.0000 80 chr16:67850588-67850668 1.0000 80 chr21:27173992-27174072 1.0000 80 chr19:17371825-17371905 1.0000 80 chr15:40567015-40567095 1.0000 80 chr8:22432000-22432080 1.0000 80 chr22:23088281-23088361 1.0000 80 chr19:6460187-6460267 1.0000 80 chr12:54140553-54140633 1.0000 80 chr15:45410422-45410502 1.0000 80 chr16:2073257-2073337 1.0000 80 chr22:23298385-23298465 1.0000 80 chr1:150952072-150952152 1.0000 80 chr17:48246784-48246864 1.0000 80 chr1:201482235-201482315 1.0000 80 chr22:22067568-22067648 1.0000 80 chr5:132155978-132156058 1.0000 80 chr22:22874529-22874609 1.0000 80 chr22:35653365-35653445 1.0000 80 chr4:6548486-6548566 1.0000 80 chr1:113351975-113352055 1.0000 80 chr14:105947327-10594740 1.0000 80 chr11:45939733-45939813 1.0000 80 chr17:72861137-72861217 1.0000 80 chr16:4304176-4304256 1.0000 80 chr1:51762650-51762730 1.0000 80 chr6:30421545-30421625 1.0000 80 chr19:8067409-8067489 1.0000 80 chr2:129079523-129079603 1.0000 80 chr10:97989390-97989470 1.0000 80 chr16:2053980-2054060 1.0000 80 chr1:155220642-155220722 1.0000 80 chr15:77925957-77926037 1.0000 80 chr9:130880017-130880097 1.0000 80 chr2:135208580-135208660 1.0000 80 chr1:208305664-208305744 1.0000 80 chr12:49736336-49736416 1.0000 80 chr11:65652245-65652325 1.0000 80 chr16:56998632-56998712 1.0000 80 chr20:30200783-30200863 1.0000 80 chr6:156983236-156983316 1.0000 80 chr11:45793635-45793715 1.0000 80 chr22:22958736-22958816 1.0000 80 chr1:40781080-40781160 1.0000 80 chr7:128523776-128523856 1.0000 80 chr22:39925310-39925390 1.0000 80 chr6:30098936-30099016 1.0000 80 chr1:38325902-38325982 1.0000 80 chr1:61515704-61515784 1.0000 80 chr1:27324282-27324362 1.0000 80 chr16:57683081-57683161 1.0000 80 chr19:50175694-50175774 1.0000 80 chr22:22415108-22415188 1.0000 80 chr6:37321745-37321825 1.0000 80 chr11:66176036-66176116 1.0000 80 chr22:23096189-23096269 1.0000 80 chr17:27077213-27077293 1.0000 80 chr19:13228903-13228983 1.0000 80 chr22:23035393-23035473 1.0000 80 chr1:23730554-23730634 1.0000 80 chr5:176736806-176736886 1.0000 80 chr17:44913378-44913458 1.0000 80 chr12:57856530-57856610 1.0000 80 chr17:36754958-36755038 1.0000 80 chr11:61348974-61349054 1.0000 80 chr15:31196001-31196081 1.0000 80 chr17:48157152-48157232 1.0000 80 chr12:57632978-57633058 1.0000 80 chr16:27214760-27214840 1.0000 80 chr1:24194890-24194970 1.0000 80 chr22:21457227-21457307 1.0000 80 chr1:209921153-209921233 1.0000 80 chr18:9771636-9771716 1.0000 80 chr19:1837734-1837814 1.0000 80 chr3:195577910-195577990 1.0000 80 chr19:14667594-14667674 1.0000 80 chr16:85309359-85309439 1.0000 80 chr1:26362582-26362662 1.0000 80 chr1:26690447-26690527 1.0000 80 chr19:15543620-15543700 1.0000 80 chr2:26726402-26726482 1.0000 80 chr1:156195346-156195426 1.0000 80 chr19:17564405-17564485 1.0000 80 chr19:12947239-12947319 1.0000 80 chr22:23088482-23088562 1.0000 80 chr1:202205631-202205711 1.0000 80 chr7:73149171-73149251 1.0000 80 chr5:139742913-139742993 1.0000 80 chr1:937357-937437 1.0000 80 chr11:66462304-66462384 1.0000 80 chr17:30334312-30334392 1.0000 80 chr1:114889256-114889336 1.0000 80 chr15:89959692-89959772 1.0000 80 chr1:53480523-53480603 1.0000 80 chr16:33619109-33619189 1.0000 80 chr7:66395458-66395538 1.0000 80 chr17:43212769-43212849 1.0000 80 chr1:22743205-22743285 1.0000 80 chr7:157091309-157091389 1.0000 80 chr16:12897774-12897854 1.0000 80 chr1:27115790-27115870 1.0000 80 chr11:60897386-60897466 1.0000 80 chr1:36834763-36834843 1.0000 80 chr7:142491275-142491355 1.0000 80 chr6:31831519-31831599 1.0000 80 chr7:43622422-43622502 1.0000 80 chr3:43811076-43811156 1.0000 80 chr12:54773540-54773620 1.0000 80 chr17:48278037-48278117 1.0000 80 chr7:150865431-150865511 1.0000 80 chr6:119558589-119558669 1.0000 80 chr3:45079298-45079378 1.0000 80 chr22:23027557-23027637 1.0000 80 chr9:140122097-140122177 1.0000 80 chr12:56401095-56401175 1.0000 80 chr22:23112820-23112900 1.0000 80 chr17:73857537-73857617 1.0000 80 chr22:22697326-22697406 1.0000 80 chr19:51059958-51060038 1.0000 80 chr16:85120474-85120554 1.0000 80 chr1:26123458-26123538 1.0000 80 chr1:113008906-113008986 1.0000 80 chr22:22918935-22919015 1.0000 80 chr1:45480422-45480502 1.0000 80 chr22:22454818-22454898 1.0000 80 chr11:67273718-67273798 1.0000 80 chr19:52111341-52111421 1.0000 80 chr10:86016967-86017047 1.0000 80 chr12:54585420-54585500 1.0000 80 chr19:51925343-51925423 1.0000 80 chr1:150532505-150532585 1.0000 80 chr15:56538363-56538443 1.0000 80 chr8:105601526-105601606 1.0000 80 chr6:2952912-2952992 1.0000 80 chr7:150869768-150869848 1.0000 80 chr15:74913531-74913611 1.0000 80 chr7:105650056-105650136 1.0000 80 chr1:155057324-155057404 1.0000 80 chr1:24136318-24136398 1.0000 80 chr21:38382345-38382425 1.0000 80 chr17:34842371-34842451 1.0000 80 chr9:124885397-124885477 1.0000 80 chr12:118810831-11881091 1.0000 80 chr15:64752655-64752735 1.0000 80 chr1:38276858-38276938 1.0000 80 chr14:90865997-90866077 1.0000 80 chr12:127765388-12776546 1.0000 80 chr18:61034918-61034998 1.0000 80 chr5:137688179-137688259 1.0000 80 chr19:36438434-36438514 1.0000 80 chr1:10534924-10535004 1.0000 80 chr1:211687451-211687531 1.0000 80 chr6:33247894-33247974 1.0000 80 chr17:58213079-58213159 1.0000 80 chr19:6517027-6517107 1.0000 80 chr19:14542829-14542909 1.0000 80 chr12:22697489-22697569 1.0000 80 chr6:15691643-15691723 1.0000 80 chr5:43105926-43106006 1.0000 80 chr1:6265372-6265452 1.0000 80 chr11:64068592-64068672 1.0000 80 chr5:134793280-134793360 1.0000 80 chr11:3846102-3846182 1.0000 80 chr1:85086531-85086611 1.0000 80 chr11:62673563-62673643 1.0000 80 chr12:54608645-54608725 1.0000 80 chr1:223307146-223307226 1.0000 80 chr5:10284228-10284308 1.0000 80 chr20:56785048-56785128 1.0000 80 chr9:96328811-96328891 1.0000 80 chr19:46320541-46320621 1.0000 80 chr1:167772723-167772803 1.0000 80 chr3:48477512-48477592 1.0000 80 chr11:46615615-46615695 1.0000 80 chr12:57024161-57024241 1.0000 80 chr14:61201416-61201496 1.0000 80 chr1:54547454-54547534 1.0000 80 chr7:1209662-1209742 1.0000 80 chr1:9687154-9687234 1.0000 80 chr1:204776463-204776543 1.0000 80 chr7:5526651-5526731 1.0000 80 chr16:8223284-8223364 1.0000 80 chr15:40401257-40401337 1.0000 80 chr16:4674364-4674444 1.0000 80 chr4:1728134-1728214 1.0000 80 chr1:17036364-17036444 1.0000 80 chr1:155163406-155163486 1.0000 80 chr10:82204556-82204636 1.0000 80 chr10:6130757-6130837 1.0000 80 chr1:15650221-15650301 1.0000 80 chr10:95462371-95462451 1.0000 80 chr2:172968697-172968777 1.0000 80 chr7:75943719-75943799 1.0000 80 chr1:26560389-26560469 1.0000 80 chr16:83960390-83960470 1.0000 80 chr7:148663993-148664073 1.0000 80 chr5:95194570-95194650 1.0000 80 chr2:74619166-74619246 1.0000 80 chr22:37252558-37252638 1.0000 80 chr22:22711737-22711817 1.0000 80 chr12:49482174-49482254 1.0000 80 chr6:16332477-16332557 1.0000 80 chr1:151162639-151162719 1.0000 80 chr1:6535702-6535782 1.0000 80 chr19:46196749-46196829 1.0000 80 chr6:44189400-44189480 1.0000 80 chr19:17416350-17416430 1.0000 80 chr7:100157528-100157608 1.0000 80 chr16:2473262-2473342 1.0000 80 chr19:4400689-4400769 1.0000 80 chr17:40172004-40172084 1.0000 80 chr1:12289961-12290041 1.0000 80 chr9:116163701-116163781 1.0000 80 chr1:51985131-51985211 1.0000 80 chr22:22081066-22081146 1.0000 80 chr1:153517646-153517726 1.0000 80 chr17:79075640-79075720 1.0000 80 chr5:149924434-149924514 1.0000 80 chr22:20925914-20925994 1.0000 80 chr17:25708148-25708228 1.0000 80 chr22:22874735-22874815 1.0000 80 chr16:47175754-47175834 1.0000 80 chr19:42800331-42800411 1.0000 80 chr16:85450132-85450212 1.0000 80 chr19:1853467-1853547 1.0000 80 chr22:21921905-21921985 1.0000 80 chr17:76247123-76247203 1.0000 80 chr19:54296365-54296445 1.0000 80 chr16:30996394-30996474 1.0000 80 chr12:113863279-11386335 1.0000 80 chr20:32900614-32900694 1.0000 80 chr17:73841452-73841532 1.0000 80 chr16:87811575-87811655 1.0000 80 chr1:112050385-112050465 1.0000 80 chr19:5804100-5804180 1.0000 80 chr9:34675214-34675294 1.0000 80 chr17:47785723-47785803 1.0000 80 chr16:8617871-8617951 1.0000 80 chr2:6985631-6985711 1.0000 80 chr7:116594355-116594435 1.0000 80 chr22:21316295-21316375 1.0000 80 chr2:209130825-209130905 1.0000 80 chr1:201528922-201529002 1.0000 80 chr7:135243348-135243428 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_XRCC5/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/XRCC5.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.181 C 0.318 G 0.322 T 0.178 Background letter frequencies (from file dataset with add-one prior applied): A 0.181 C 0.318 G 0.322 T 0.178 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CGCCCCCT MEME-1 width = 8 sites = 77 llr = 617 E-value = 1.6e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::3::: pos.-specific C 7:aa78a: probability G :9:::::: matrix T 31::12:a bits 2.5 * 2.2 * 2.0 * 1.7 ** ** Relative 1.5 ** ** Entropy 1.2 *** ** (11.6 bits) 1.0 **** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGCCCCCT consensus T AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:25708148-25708228 60 5.93e-05 CCTAGGCCCT CGCCCCCT GGTGGCGGCA chr22:20925914-20925994 43 5.93e-05 CCAATAGCAG CGCCCCCT GCTGGGGGAT chr5:149924434-149924514 64 5.93e-05 AGCCCCAGCT CGCCCCCT AGAGGCAGA chr19:4400689-4400769 48 5.93e-05 GCAGTTGCAG CGCCCCCT GGAGTCGTGG chr19:46196749-46196829 9 5.93e-05 CTTATCTG CGCCCCCT GCTGGTTGTG chr22:37252558-37252638 40 5.93e-05 CTGATCGCGG CGCCCCCT GGCGGTCTGT chr7:148663993-148664073 48 5.93e-05 GGGCCTCTGG CGCCCCCT GCAGGACGCA chr4:1728134-1728214 15 5.93e-05 TTGTTTACCA CGCCCCCT GCTGGCCATC chr11:64068592-64068672 42 5.93e-05 ATTCTTGGAG CGCCCCCT CCCGGGCAGG chr9:124885397-124885477 66 5.93e-05 CACCCAGAGG CGCCCCCT GCCTTGA chr7:105650056-105650136 47 5.93e-05 AGGAGGCGGG CGCCCCCT GCTGCCCGCG chr10:86016967-86017047 12 5.93e-05 GCGAGTCTTG CGCCCCCT CATGGCCCCA chr1:113008906-113008986 20 5.93e-05 GACTTACTTG CGCCCCCT GGTGTTTCAC chr1:26123458-26123538 39 5.93e-05 AGGGCAGCAG CGCCCCCT GCGGGAAGAA chr19:51059958-51060038 52 5.93e-05 aGCGAGCCAG CGCCCCCT ACCGGCAGTT chr17:73857537-73857617 29 5.93e-05 gcctctctag cgccccct cttggcagag chr11:60897386-60897466 41 5.93e-05 GAGGACCAGA CGCCCCCT CGTGGCATCC chr1:27115790-27115870 40 5.93e-05 AAGCAGCAGG CGCCCCCT TGTGCCAAGG chr17:30334312-30334392 52 5.93e-05 CGCGCCACCT CGCCCCCT TCCCAGGCTG chr1:26690447-26690527 42 5.93e-05 GCTCCCTGGG CGCCCCCT GCTGGGCGAT chr12:57632978-57633058 26 5.93e-05 TGGGCTCGGG CGCCCCCT GGAGGCCGAG chr12:49736336-49736416 40 5.93e-05 GGGTCCAGGG CGCCCCCT GCTGGGAAGC chr15:40567015-40567095 29 5.93e-05 TTACTGTGGA CGCCCCCT GCTGGCAGGT chr21:27173992-27174072 64 5.93e-05 TTCTGCATTG CGCCCCCT AGAGGTGAG chr1:6550056-6550136 45 5.93e-05 CAGCCTCTGG CGCCCCCT GCCGGCCTCG chr2:172968697-172968777 55 9.30e-05 TGCTTTGTGG CGCCACCT GGTGGGCAGT chr16:8223284-8223364 35 9.30e-05 AGTTCGAGGT CGCCACCT AGTGGCCAGC chr7:5526651-5526731 41 9.30e-05 GGAGCCCCAG CGCCACCT GCTGGGCCTT chr1:204776463-204776543 46 9.30e-05 GGCACTGTGG CGCCACCT AGTGCCTCTG chr20:56785048-56785128 40 9.30e-05 CGTTCGACAG CGCCACCT GGCGGGAGCC chr9:140122097-140122177 39 9.30e-05 GGAGCTGGTG CGCCACCT GGAGTCCATG chr12:54773540-54773620 30 9.30e-05 TACCCGCGCC CGCCACCT GCCGGAGAAC chr1:23730554-23730634 56 9.30e-05 TGCTTCTGTG CGCCACCT CGAGGGCATT chr1:38325902-38325982 41 9.30e-05 GGCCAGTTAG CGCCACCT ACCGGCCACT chr6:30098936-30099016 52 9.30e-05 TGAAAGACAG CGCCACCT ACTGTCCATC chr7:128523776-128523856 44 9.30e-05 CGCCCTGCAG CGCCACCT GCTGGCCAAG chr7:100157528-100157608 44 1.26e-04 GGGATGGTTC TGCCCCCT AGTGTCCACA chr7:75943719-75943799 4 1.26e-04 GAC TGCCCCCT AGAGGACGCC chr1:54547454-54547534 57 1.26e-04 AGGGATGTAC TGCCCCCT GCAGGCCAAA chr5:43105926-43106006 15 1.26e-04 GAAGTTCTGC TGCCCCCT CACGGTGGGA chr1:150532505-150532585 60 1.26e-04 CTCTCCACAT TGCCCCCT GGTGGTACAG chr11:67273718-67273798 40 1.26e-04 GGCCCTGTGC TGCCCCCT GGTGGCACCA chr7:142491275-142491355 32 1.26e-04 AAGGAAAGGC TGCCCCCT GCTGCCCACA chr1:6535702-6535782 34 1.59e-04 TAGGGCTGTG CGCCCTCT GGTGGCCAAC chr1:155163406-155163486 29 1.59e-04 GAGCTCCTCC CGCCCTCT AGTGGTCACC chr16:4674364-4674444 31 1.59e-04 GGTGCAGCTA CGCCCTCT GCCGGTCGGG chr1:24194890-24194970 37 1.59e-04 GTCGGAGGAG CGCCCTCT GGTGCTCAAG chr17:27077213-27077293 19 1.59e-04 CCTGCTGGCT CGCCCTCT GATGGACGCC chr19:50175694-50175774 69 1.59e-04 cgctaatggg cgccctct ggcg chr6:156983236-156983316 36 1.59e-04 TCGCAGAGTG CGCCCTCT ACCGGAGGGG chr4:6548486-6548566 45 1.59e-04 TAAATCATGG CGCCCTCT GGTGGTCCTT chr5:132155978-132156058 17 1.59e-04 ATTAGGACAG CGCCCTCT GCTGGCAGTA chr15:45410422-45410502 25 1.59e-04 GTAATAGGGG CGCCCTCT AGTGAGGCCG chr1:167772723-167772803 29 1.78e-04 GAGCCAGTGC TGCCACCT GCTGGCCAAG chr1:36834763-36834843 36 1.78e-04 TCTCCAGGCC TGCCACCT GGTGGTGTCT chr17:44913378-44913458 37 1.78e-04 AGGGTCATAG TGCCACCT GCTGGGGCTC chr11:65652245-65652325 57 1.78e-04 GGAGCAGCAG TGCCACCT GCCGGCCAAT chr19:8067409-8067489 30 1.78e-04 GCCTCGCTAC TGCCACCT AGGGGCGCCA chr1:201482235-201482315 9 1.78e-04 AATAAGCT TGCCACCT GCTGGTGAAC chr16:85450132-85450212 12 2.16e-04 TGTGCCCACT TGCCCTCT AGGGGGAGCC chr7:150869768-150869848 17 2.16e-04 TGGCCGCGGG TGCCCTCT GGTGGCAGCA chr15:56538363-56538443 55 2.16e-04 AGCCGCGGGC TGCCCTCT AGCGGCGGTG chr1:156195346-156195426 43 2.16e-04 GGTCCCCGCC TGCCCTCT GGTGGACAGT chr7:1209662-1209742 25 2.59e-04 ACCCTGGCAG CTCCCCCT GGCGGCAGCA chr7:43622422-43622502 48 2.59e-04 GCTGCACCTT CTCCCCCT GAGCTGCAGA chr16:57683081-57683161 20 2.59e-04 TGGGTACTGG CTCCCCCT GGCGGTCATG chr9:130880017-130880097 53 2.59e-04 CAGGCCCTGT TGCCATCT CCTACGAGGC chr22:22081066-22081146 61 2.78e-04 CAGCTCTCGC CTCCACCT TGTGGTTTCT chr1:26560389-26560469 43 2.78e-04 GTGAGCAGAG CTCCACCT ACAGGTAAAA chr19:51925343-51925423 19 2.78e-04 CCAGGGGGCG CTCCACCT TCAGAGCAGG chr22:35653365-35653445 55 2.96e-04 TCGAGCGGGA TTCCCCCT CCGGAGCCCG chr1:12289961-12290041 49 3.48e-04 CGCCAGGGGG CGCCTCCT CGATAACTCG chr16:85120474-85120554 10 3.48e-04 TAATTAATC CGCCTCCT ACACGACCCC chr1:937357-937437 52 3.48e-04 CAGTCGCCGC CGCCTCCT GCTGGGGGTC chr22:22918935-22919015 25 3.68e-04 GCTTGGGCTC CTCCATCT GAGGCCACCA chr1:51762650-51762730 37 3.97e-04 CCACAGCTCC TGCCTCCT GGCTAAGAAA chr8:22432000-22432080 50 3.97e-04 GCAAATCCAA TTCCCTCT CTGGGCTCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:25708148-25708228 5.9e-05 59_[+1]_13 chr22:20925914-20925994 5.9e-05 42_[+1]_30 chr5:149924434-149924514 5.9e-05 63_[+1]_9 chr19:4400689-4400769 5.9e-05 47_[+1]_25 chr19:46196749-46196829 5.9e-05 8_[+1]_64 chr22:37252558-37252638 5.9e-05 39_[+1]_33 chr7:148663993-148664073 5.9e-05 47_[+1]_25 chr4:1728134-1728214 5.9e-05 14_[+1]_58 chr11:64068592-64068672 5.9e-05 41_[+1]_31 chr9:124885397-124885477 5.9e-05 65_[+1]_7 chr7:105650056-105650136 5.9e-05 46_[+1]_26 chr10:86016967-86017047 5.9e-05 11_[+1]_61 chr1:113008906-113008986 5.9e-05 19_[+1]_53 chr1:26123458-26123538 5.9e-05 38_[+1]_34 chr19:51059958-51060038 5.9e-05 51_[+1]_21 chr17:73857537-73857617 5.9e-05 28_[+1]_44 chr11:60897386-60897466 5.9e-05 40_[+1]_32 chr1:27115790-27115870 5.9e-05 39_[+1]_33 chr17:30334312-30334392 5.9e-05 51_[+1]_21 chr1:26690447-26690527 5.9e-05 41_[+1]_31 chr12:57632978-57633058 5.9e-05 25_[+1]_47 chr12:49736336-49736416 5.9e-05 39_[+1]_33 chr15:40567015-40567095 5.9e-05 28_[+1]_44 chr21:27173992-27174072 5.9e-05 63_[+1]_9 chr1:6550056-6550136 5.9e-05 44_[+1]_28 chr2:172968697-172968777 9.3e-05 54_[+1]_18 chr16:8223284-8223364 9.3e-05 34_[+1]_38 chr7:5526651-5526731 9.3e-05 40_[+1]_32 chr1:204776463-204776543 9.3e-05 45_[+1]_27 chr20:56785048-56785128 9.3e-05 39_[+1]_33 chr9:140122097-140122177 9.3e-05 38_[+1]_34 chr12:54773540-54773620 9.3e-05 29_[+1]_43 chr1:23730554-23730634 9.3e-05 55_[+1]_17 chr1:38325902-38325982 9.3e-05 40_[+1]_32 chr6:30098936-30099016 9.3e-05 51_[+1]_21 chr7:128523776-128523856 9.3e-05 43_[+1]_29 chr7:100157528-100157608 0.00013 43_[+1]_29 chr7:75943719-75943799 0.00013 3_[+1]_69 chr1:54547454-54547534 0.00013 56_[+1]_16 chr5:43105926-43106006 0.00013 14_[+1]_58 chr1:150532505-150532585 0.00013 59_[+1]_13 chr11:67273718-67273798 0.00013 39_[+1]_33 chr7:142491275-142491355 0.00013 31_[+1]_41 chr1:6535702-6535782 0.00016 33_[+1]_39 chr1:155163406-155163486 0.00016 28_[+1]_44 chr16:4674364-4674444 0.00016 30_[+1]_42 chr1:24194890-24194970 0.00016 36_[+1]_36 chr17:27077213-27077293 0.00016 18_[+1]_54 chr19:50175694-50175774 0.00016 68_[+1]_4 chr6:156983236-156983316 0.00016 35_[+1]_37 chr4:6548486-6548566 0.00016 44_[+1]_28 chr5:132155978-132156058 0.00016 16_[+1]_56 chr15:45410422-45410502 0.00016 24_[+1]_48 chr1:167772723-167772803 0.00018 28_[+1]_44 chr1:36834763-36834843 0.00018 35_[+1]_37 chr17:44913378-44913458 0.00018 36_[+1]_36 chr11:65652245-65652325 0.00018 56_[+1]_16 chr19:8067409-8067489 0.00018 29_[+1]_43 chr1:201482235-201482315 0.00018 8_[+1]_64 chr16:85450132-85450212 0.00022 11_[+1]_61 chr7:150869768-150869848 0.00022 16_[+1]_56 chr15:56538363-56538443 0.00022 54_[+1]_18 chr1:156195346-156195426 0.00022 42_[+1]_30 chr7:1209662-1209742 0.00026 24_[+1]_48 chr7:43622422-43622502 0.00026 47_[+1]_25 chr16:57683081-57683161 0.00026 19_[+1]_53 chr9:130880017-130880097 0.00026 52_[+1]_20 chr22:22081066-22081146 0.00028 60_[+1]_12 chr1:26560389-26560469 0.00028 42_[+1]_30 chr19:51925343-51925423 0.00028 18_[+1]_54 chr22:35653365-35653445 0.0003 54_[+1]_18 chr1:12289961-12290041 0.00035 48_[+1]_24 chr16:85120474-85120554 0.00035 9_[+1]_63 chr1:937357-937437 0.00035 51_[+1]_21 chr22:22918935-22919015 0.00037 24_[+1]_48 chr1:51762650-51762730 0.0004 36_[+1]_36 chr8:22432000-22432080 0.0004 49_[+1]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGCCCCCT width=8 seqs=77 chr17:25708148-25708228 ( 60) CGCCCCCT 1 chr22:20925914-20925994 ( 43) CGCCCCCT 1 chr5:149924434-149924514 ( 64) CGCCCCCT 1 chr19:4400689-4400769 ( 48) CGCCCCCT 1 chr19:46196749-46196829 ( 9) CGCCCCCT 1 chr22:37252558-37252638 ( 40) CGCCCCCT 1 chr7:148663993-148664073 ( 48) CGCCCCCT 1 chr4:1728134-1728214 ( 15) CGCCCCCT 1 chr11:64068592-64068672 ( 42) CGCCCCCT 1 chr9:124885397-124885477 ( 66) CGCCCCCT 1 chr7:105650056-105650136 ( 47) CGCCCCCT 1 chr10:86016967-86017047 ( 12) CGCCCCCT 1 chr1:113008906-113008986 ( 20) CGCCCCCT 1 chr1:26123458-26123538 ( 39) CGCCCCCT 1 chr19:51059958-51060038 ( 52) CGCCCCCT 1 chr17:73857537-73857617 ( 29) CGCCCCCT 1 chr11:60897386-60897466 ( 41) CGCCCCCT 1 chr1:27115790-27115870 ( 40) CGCCCCCT 1 chr17:30334312-30334392 ( 52) CGCCCCCT 1 chr1:26690447-26690527 ( 42) CGCCCCCT 1 chr12:57632978-57633058 ( 26) CGCCCCCT 1 chr12:49736336-49736416 ( 40) CGCCCCCT 1 chr15:40567015-40567095 ( 29) CGCCCCCT 1 chr21:27173992-27174072 ( 64) CGCCCCCT 1 chr1:6550056-6550136 ( 45) CGCCCCCT 1 chr2:172968697-172968777 ( 55) CGCCACCT 1 chr16:8223284-8223364 ( 35) CGCCACCT 1 chr7:5526651-5526731 ( 41) CGCCACCT 1 chr1:204776463-204776543 ( 46) CGCCACCT 1 chr20:56785048-56785128 ( 40) CGCCACCT 1 chr9:140122097-140122177 ( 39) CGCCACCT 1 chr12:54773540-54773620 ( 30) CGCCACCT 1 chr1:23730554-23730634 ( 56) CGCCACCT 1 chr1:38325902-38325982 ( 41) CGCCACCT 1 chr6:30098936-30099016 ( 52) CGCCACCT 1 chr7:128523776-128523856 ( 44) CGCCACCT 1 chr7:100157528-100157608 ( 44) TGCCCCCT 1 chr7:75943719-75943799 ( 4) TGCCCCCT 1 chr1:54547454-54547534 ( 57) TGCCCCCT 1 chr5:43105926-43106006 ( 15) TGCCCCCT 1 chr1:150532505-150532585 ( 60) TGCCCCCT 1 chr11:67273718-67273798 ( 40) TGCCCCCT 1 chr7:142491275-142491355 ( 32) TGCCCCCT 1 chr1:6535702-6535782 ( 34) CGCCCTCT 1 chr1:155163406-155163486 ( 29) CGCCCTCT 1 chr16:4674364-4674444 ( 31) CGCCCTCT 1 chr1:24194890-24194970 ( 37) CGCCCTCT 1 chr17:27077213-27077293 ( 19) CGCCCTCT 1 chr19:50175694-50175774 ( 69) CGCCCTCT 1 chr6:156983236-156983316 ( 36) CGCCCTCT 1 chr4:6548486-6548566 ( 45) CGCCCTCT 1 chr5:132155978-132156058 ( 17) CGCCCTCT 1 chr15:45410422-45410502 ( 25) CGCCCTCT 1 chr1:167772723-167772803 ( 29) TGCCACCT 1 chr1:36834763-36834843 ( 36) TGCCACCT 1 chr17:44913378-44913458 ( 37) TGCCACCT 1 chr11:65652245-65652325 ( 57) TGCCACCT 1 chr19:8067409-8067489 ( 30) TGCCACCT 1 chr1:201482235-201482315 ( 9) TGCCACCT 1 chr16:85450132-85450212 ( 12) TGCCCTCT 1 chr7:150869768-150869848 ( 17) TGCCCTCT 1 chr15:56538363-56538443 ( 55) TGCCCTCT 1 chr1:156195346-156195426 ( 43) TGCCCTCT 1 chr7:1209662-1209742 ( 25) CTCCCCCT 1 chr7:43622422-43622502 ( 48) CTCCCCCT 1 chr16:57683081-57683161 ( 20) CTCCCCCT 1 chr9:130880017-130880097 ( 53) TGCCATCT 1 chr22:22081066-22081146 ( 61) CTCCACCT 1 chr1:26560389-26560469 ( 43) CTCCACCT 1 chr19:51925343-51925423 ( 19) CTCCACCT 1 chr22:35653365-35653445 ( 55) TTCCCCCT 1 chr1:12289961-12290041 ( 49) CGCCTCCT 1 chr16:85120474-85120554 ( 10) CGCCTCCT 1 chr1:937357-937437 ( 52) CGCCTCCT 1 chr22:22918935-22919015 ( 25) CTCCATCT 1 chr1:51762650-51762730 ( 37) TGCCTCCT 1 chr8:22432000-22432080 ( 50) TTCCCTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.79481 E= 1.6e-038 -1291 119 -1291 61 -1291 -1291 145 -61 -1291 165 -1291 -1291 -1291 165 -1291 -1291 66 106 -1291 -178 -1291 129 -1291 31 -1291 165 -1291 -1291 -1291 -1291 -1291 249 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 77 E= 1.6e-038 0.000000 0.727273 0.000000 0.272727 0.000000 0.000000 0.883117 0.116883 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.285714 0.662338 0.000000 0.051948 0.000000 0.779221 0.000000 0.220779 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 regular expression -------------------------------------------------------------------------------- [CT]GCC[CA][CT]CT -------------------------------------------------------------------------------- Time 5.00 secs. ******************************************************************************** ******************************************************************************** MOTIF AGRGGGCR MEME-2 width = 8 sites = 94 llr = 701 E-value = 6.4e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 Description -------------------------------------------------------------------------------- Simplified A a141::24 pos.-specific C ::::::8: probability G :967aa:6 matrix T :::2:::: bits 2.5 * 2.2 * 2.0 * 1.7 * ** Relative 1.5 * ** Entropy 1.2 ** *** (10.8 bits) 1.0 *** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGGGGGCG consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:32900614-32900694 24 2.03e-05 CTGTGCCAGG AGAGGGCA CCCTGCTCCC chr17:76247123-76247203 4 2.03e-05 ACT AGAGGGCA CCAGGCACCA chr16:47175754-47175834 18 2.03e-05 CGATGGCCAG AGAGGGCA GTGTGCACCC chr5:43105926-43106006 70 2.03e-05 AAGAACCACT AGAGGGCA GCA chr19:36438434-36438514 52 2.03e-05 AGGGGGAGCC AGAGGGCA CTGTTCgtgt chr3:45079298-45079378 22 2.03e-05 GCTGCCCACA AGAGGGCA CTCATGCCTC chr12:57856530-57856610 23 2.03e-05 TTTCTGTCTA AGAGGGCA GATGGCTTGT chr1:27324282-27324362 22 2.03e-05 CGTTGCCACC AGAGGGCA GTGTGGGGCT chr15:77925957-77926037 56 2.03e-05 AGTGGCCAGC AGAGGGCA GCGCAGAGCC chr17:48246784-48246864 50 2.03e-05 TTCCCCCACA AGAGGGCA ACAGAGTCCG chr9:34675214-34675294 69 5.63e-05 TGGGGCCTGC AGAGGGCG TCTA chr6:16332477-16332557 44 5.63e-05 ATGAACCACC AGAGGGCG CCCCAGGATG chr12:49482174-49482254 43 5.63e-05 GAAGGCCACC AGAGGGCG GTGTATAGCA chr1:223307146-223307226 39 5.63e-05 AGAGACCAGC AGAGGGCG CAAAAGGGGC chr12:54608645-54608725 19 5.63e-05 GTTGGCCAGC AGAGGGCG CAATAGGAGG chr12:127765388-12776546 1 5.63e-05 . AGAGGGCG TGTCTGCGGA chr7:43622422-43622502 63 5.63e-05 CCTGAGCTGC AGAGGGCG CGCGTGAGGC chr11:66462304-66462384 3 5.63e-05 gc agagggcg ctggagggac chr2:26726402-26726482 45 5.63e-05 CACCCCCGAC AGAGGGCG CTGCCCGTTT chr11:66176036-66176116 3 5.63e-05 CC AGAGGGCG ACATAGACGG chr16:57683081-57683161 69 5.63e-05 TGGCTCCTGT AGAGGGCG TCGC chr14:105947327-10594740 43 5.63e-05 GGTGCCCACT AGAGGGCG CACTGTCCCA chr19:17371825-17371905 25 5.63e-05 ctccgccacc agagggcg cctgtgaaca chr5:137688179-137688259 16 9.24e-05 TCCAGACCGC AGGGGGCA CTGCAGGCCC chr1:24136318-24136398 63 9.24e-05 GCTGGCCTTT AGggggca gcagggtgca chr5:139742913-139742993 27 9.24e-05 AGCAGCCGCT AGGGGGCA GGGCGCCACG chr19:14667594-14667674 45 9.24e-05 TGCGGCCACA AGGGGGCA GTGGGGAGCG chr5:176736806-176736886 64 9.24e-05 CCTGTCCACC AGGGGGCA CTGAGCTCA chr8:22432000-22432080 20 9.24e-05 TTCTGCCGCT AGGGGGCA GGAAGGAGGA chr16:67850588-67850668 9 9.24e-05 CAACCACC AGGGGGCA GTGTTCCCTC chr22:23053347-23053427 42 9.24e-05 AGTGGCCACC AGGGGGCA GCAGAGAGTA chr22:22936633-22936713 44 9.24e-05 TGTGGGCACC AGGGGGCA CTGTGACCCC chr16:30996394-30996474 47 1.57e-04 AGCGGCCGCC AGGGGGCG CCTTGGGGCA chr7:5526651-5526731 3 1.57e-04 GC AGGGGGCG GGGCCTGCGG chr19:46320541-46320621 1 1.57e-04 . AGGGGGCG AAATTACCCC chr12:22697489-22697569 42 1.57e-04 AGGAAAGATA AGGGGGCG GGGCTGACGT chr19:6517027-6517107 36 1.57e-04 CAGGTCCACC AGGGGGCG CCCGCTGCCC chr1:38276858-38276938 56 1.57e-04 AGAGAGCCTG AGGGGGCG CCCTGGGGCA chr19:51925343-51925423 11 1.57e-04 CGCCGCCCCC AGGGGGCG CTCCACCTTC chr19:52111341-52111421 15 1.57e-04 TTCTGCTCCC AGGGGGCG CTCCACCCGC chr22:22918935-22919015 42 1.57e-04 TGAGGCCACC AGGGGGCG GCAAGGGCTT chr7:150865431-150865511 50 1.57e-04 CGGGGCCGAC AGGGGGCG CGCTGGGCCC chr3:43811076-43811156 34 1.57e-04 TGTGACCAGC AGGGGGCG GCTCCTCTCT chr17:43212769-43212849 60 1.57e-04 TATGTGCACC AGGGGGCG CTGCCGCCCG chr19:17564405-17564485 15 1.57e-04 TCCTGCCGCG AGGGGGCG CCAGAGGCCA chr22:21457227-21457307 30 1.57e-04 CGTGACCATC AGGGGGCG CCCCAACCAC chr22:22415108-22415188 49 1.57e-04 CCTGGGCAGC AGGGGGCG CTGTGGGGCT chr1:208305664-208305744 46 1.57e-04 CAGGGCAGCC AGGGGGCG CTGTCTCAGG chr22:22454818-22454898 26 1.68e-04 AGCCACCAGA AGATGGCA GTAACCTCAC chr16:83960390-83960470 51 1.88e-04 CGTCGCCGCG AGATGGCG GTGTTGCGCC chr11:62673563-62673643 52 1.88e-04 GATTGCCGGC AGATGGCG CTAAAGCAAC chr16:85309359-85309439 41 1.88e-04 TGTCCCCAGC AGATGGCG CCCTCGGCCT chr17:73841452-73841532 35 2.19e-04 GCAGGGGACA AGGTGGCA GCCCCAACTC chr10:82204556-82204636 62 2.19e-04 GACTGCCTCT AGGTGGCA GTGTATGCAC chr5:134793280-134793360 65 2.19e-04 TGTGGCCACC AGGTGGCA GCATCCCT chr6:33247894-33247974 71 2.19e-04 CCTCTCCAGC AGAGGGAA AC chr19:12947239-12947319 41 2.19e-04 ATGCAAAGAC AGAGGGAA AACCTGGTTT chr9:130880017-130880097 31 2.19e-04 ATTGGCCGCT AGGTGGCA GCAGCAGGCC chr5:95194570-95194650 33 2.75e-04 GAATTCCAGC AGGTGGCG CTGCACCCCG chr5:10284228-10284308 63 2.75e-04 AGCGGCCAGA AGGTGGCG CCGGGGAGGC chr14:90865997-90866077 38 2.75e-04 atggtgcagt aggtggcg ctcttctgtc chr6:119558589-119558669 42 2.75e-04 GGTACTTTTA AGAGGGAG TCACTGCTGC chr1:61515704-61515784 31 2.75e-04 GCTCGCCTGT AGGTGGCG CCCTGCTTCG chr11:65652245-65652325 43 2.75e-04 AGCGGCCACC AGAGGGAG CAGCAGTGCC chr16:2073257-2073337 30 2.75e-04 AGTTCCGGCC AGGTGGCG CTGCGCGGCT chr22:23301537-23301617 41 2.75e-04 ATTGCCCACC AGGTGGCG GAAATGCAGG chr22:23035393-23035473 49 2.96e-04 AGCGGCCACC AGGGGGAA GCAGAGAGTT chr22:23096189-23096269 31 2.96e-04 AGCAGCCACC AGGGGGAA GCAGAGAATC chr22:22067568-22067648 68 2.96e-04 aacagccacg agggggaa gcaac chr16:85450132-85450212 20 3.32e-04 CTTGCCCTCT AGGGGGAG CCCGGGTTGA chr1:9687154-9687234 29 3.32e-04 GGCGGGCAGC AGGGGGAG CCGCTGAGCC chr22:22697326-22697406 49 3.32e-04 CCTGGCCACT AGGGGGAG GCAAACTCTG chr2:135208580-135208660 60 3.32e-04 TCTGACCAAC AGGGGGAG CCTGCAGGCC chr17:72861137-72861217 52 3.93e-04 CCTGGTGGCC AGATGGAG CATTGCTGCC chr4:6548486-6548566 68 3.93e-04 TCCTTATGAA AAAGGGCA GGCCG chr19:14542829-14542909 26 4.45e-04 CTCGGGTCCC AAAGGGCG CCAATGTGCA chr18:61034918-61034998 2 4.45e-04 G AAAGGGCG GCTGGAGGCT chr7:157091309-157091389 28 4.45e-04 ttcctccagg aggaggca cttctgctga chr1:26560389-26560469 67 5.21e-04 AAAACGCGGC AAGGGGCA GAGAAG chr7:105650056-105650136 37 5.21e-04 GGCGGCGTGG AGGAGGCG GGCGCCCCCT chr6:2952912-2952992 19 5.21e-04 GGAGGCCAGC AGGAGGCG CGGTAGCGGG chr16:33619109-33619189 57 5.21e-04 TCAGGAAACA AGGAGGCG CTCCGGACAC chr19:1837734-1837814 58 5.21e-04 ACCGCCCAGC AGGTGGAG CCACACGGCA chr17:48157152-48157232 56 5.21e-04 TTTGGCCGGC AGGAGGCG GTGTCGGGCA chr15:56538363-56538443 26 5.77e-04 AGCAGCCACT AGAGGGCT CACGAAGCTG chr19:13228903-13228983 48 5.77e-04 AGCCGGTTAG AAGGGGCG CGCTCGGAGC chr1:6550056-6550136 63 5.77e-04 GCCGGCCTCG AGAGGGCT TTTCCGCCTG chr7:73149171-73149251 54 6.13e-04 GAAGGGAGGA AGGGGGCT GAGTGTGCTC chr1:150952072-150952152 46 6.13e-04 AGGGGCCACT AGGGGGCT CGAGACTCTC chr10:95462371-95462451 6 6.19e-04 CATCT AAATGGCA CCGTCCCCCG chr1:155057324-155057404 44 6.66e-04 GGACAGACCA AGAAGGAG GGCACGGAAG chr22:22958736-22958816 61 6.66e-04 GGCAGAACTG AAAGGGAA GAGCTATATC chr15:40567015-40567095 62 6.66e-04 CGGGGCTGCT AAGTGGCA CCGCCATCTG chr11:46615615-46615695 3 7.20e-04 AA AGGAGGAA CGCCCAAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:32900614-32900694 2e-05 23_[+2]_49 chr17:76247123-76247203 2e-05 3_[+2]_69 chr16:47175754-47175834 2e-05 17_[+2]_55 chr5:43105926-43106006 2e-05 69_[+2]_3 chr19:36438434-36438514 2e-05 51_[+2]_21 chr3:45079298-45079378 2e-05 21_[+2]_51 chr12:57856530-57856610 2e-05 22_[+2]_50 chr1:27324282-27324362 2e-05 21_[+2]_51 chr15:77925957-77926037 2e-05 55_[+2]_17 chr17:48246784-48246864 2e-05 49_[+2]_23 chr9:34675214-34675294 5.6e-05 68_[+2]_4 chr6:16332477-16332557 5.6e-05 43_[+2]_29 chr12:49482174-49482254 5.6e-05 42_[+2]_30 chr1:223307146-223307226 5.6e-05 38_[+2]_34 chr12:54608645-54608725 5.6e-05 18_[+2]_54 chr12:127765388-12776546 5.6e-05 [+2]_72 chr7:43622422-43622502 5.6e-05 62_[+2]_10 chr11:66462304-66462384 5.6e-05 2_[+2]_70 chr2:26726402-26726482 5.6e-05 44_[+2]_28 chr11:66176036-66176116 5.6e-05 2_[+2]_70 chr16:57683081-57683161 5.6e-05 68_[+2]_4 chr14:105947327-10594740 5.6e-05 42_[+2]_30 chr19:17371825-17371905 5.6e-05 24_[+2]_48 chr5:137688179-137688259 9.2e-05 15_[+2]_57 chr1:24136318-24136398 9.2e-05 62_[+2]_10 chr5:139742913-139742993 9.2e-05 26_[+2]_46 chr19:14667594-14667674 9.2e-05 44_[+2]_28 chr5:176736806-176736886 9.2e-05 63_[+2]_9 chr8:22432000-22432080 9.2e-05 19_[+2]_53 chr16:67850588-67850668 9.2e-05 8_[+2]_64 chr22:23053347-23053427 9.2e-05 41_[+2]_31 chr22:22936633-22936713 9.2e-05 43_[+2]_29 chr16:30996394-30996474 0.00016 46_[+2]_26 chr7:5526651-5526731 0.00016 2_[+2]_70 chr19:46320541-46320621 0.00016 [+2]_72 chr12:22697489-22697569 0.00016 41_[+2]_31 chr19:6517027-6517107 0.00016 35_[+2]_37 chr1:38276858-38276938 0.00016 55_[+2]_17 chr19:51925343-51925423 0.00016 10_[+2]_62 chr19:52111341-52111421 0.00016 14_[+2]_58 chr22:22918935-22919015 0.00016 41_[+2]_31 chr7:150865431-150865511 0.00016 49_[+2]_23 chr3:43811076-43811156 0.00016 33_[+2]_39 chr17:43212769-43212849 0.00016 59_[+2]_13 chr19:17564405-17564485 0.00016 14_[+2]_58 chr22:21457227-21457307 0.00016 29_[+2]_43 chr22:22415108-22415188 0.00016 48_[+2]_24 chr1:208305664-208305744 0.00016 45_[+2]_27 chr22:22454818-22454898 0.00017 25_[+2]_47 chr16:83960390-83960470 0.00019 50_[+2]_22 chr11:62673563-62673643 0.00019 51_[+2]_21 chr16:85309359-85309439 0.00019 40_[+2]_32 chr17:73841452-73841532 0.00022 34_[+2]_38 chr10:82204556-82204636 0.00022 61_[+2]_11 chr5:134793280-134793360 0.00022 64_[+2]_8 chr6:33247894-33247974 0.00022 70_[+2]_2 chr19:12947239-12947319 0.00022 40_[+2]_32 chr9:130880017-130880097 0.00022 30_[+2]_42 chr5:95194570-95194650 0.00028 32_[+2]_40 chr5:10284228-10284308 0.00028 62_[+2]_10 chr14:90865997-90866077 0.00028 37_[+2]_35 chr6:119558589-119558669 0.00028 41_[+2]_31 chr1:61515704-61515784 0.00028 30_[+2]_42 chr11:65652245-65652325 0.00028 42_[+2]_30 chr16:2073257-2073337 0.00028 29_[+2]_43 chr22:23301537-23301617 0.00028 40_[+2]_32 chr22:23035393-23035473 0.0003 48_[+2]_24 chr22:23096189-23096269 0.0003 30_[+2]_42 chr22:22067568-22067648 0.0003 67_[+2]_5 chr16:85450132-85450212 0.00033 19_[+2]_53 chr1:9687154-9687234 0.00033 28_[+2]_44 chr22:22697326-22697406 0.00033 48_[+2]_24 chr2:135208580-135208660 0.00033 59_[+2]_13 chr17:72861137-72861217 0.00039 51_[+2]_21 chr4:6548486-6548566 0.00039 67_[+2]_5 chr19:14542829-14542909 0.00044 25_[+2]_47 chr18:61034918-61034998 0.00044 1_[+2]_71 chr7:157091309-157091389 0.00044 27_[+2]_45 chr1:26560389-26560469 0.00052 66_[+2]_6 chr7:105650056-105650136 0.00052 36_[+2]_36 chr6:2952912-2952992 0.00052 18_[+2]_54 chr16:33619109-33619189 0.00052 56_[+2]_16 chr19:1837734-1837814 0.00052 57_[+2]_15 chr17:48157152-48157232 0.00052 55_[+2]_17 chr15:56538363-56538443 0.00058 25_[+2]_47 chr19:13228903-13228983 0.00058 47_[+2]_25 chr1:6550056-6550136 0.00058 62_[+2]_10 chr7:73149171-73149251 0.00061 53_[+2]_19 chr1:150952072-150952152 0.00061 45_[+2]_27 chr10:95462371-95462451 0.00062 5_[+2]_67 chr1:155057324-155057404 0.00067 43_[+2]_29 chr22:22958736-22958816 0.00067 60_[+2]_12 chr15:40567015-40567095 0.00067 61_[+2]_11 chr11:46615615-46615695 0.00072 2_[+2]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGRGGGCR width=8 seqs=94 chr20:32900614-32900694 ( 24) AGAGGGCA 1 chr17:76247123-76247203 ( 4) AGAGGGCA 1 chr16:47175754-47175834 ( 18) AGAGGGCA 1 chr5:43105926-43106006 ( 70) AGAGGGCA 1 chr19:36438434-36438514 ( 52) AGAGGGCA 1 chr3:45079298-45079378 ( 22) AGAGGGCA 1 chr12:57856530-57856610 ( 23) AGAGGGCA 1 chr1:27324282-27324362 ( 22) AGAGGGCA 1 chr15:77925957-77926037 ( 56) AGAGGGCA 1 chr17:48246784-48246864 ( 50) AGAGGGCA 1 chr9:34675214-34675294 ( 69) AGAGGGCG 1 chr6:16332477-16332557 ( 44) AGAGGGCG 1 chr12:49482174-49482254 ( 43) AGAGGGCG 1 chr1:223307146-223307226 ( 39) AGAGGGCG 1 chr12:54608645-54608725 ( 19) AGAGGGCG 1 chr12:127765388-12776546 ( 1) AGAGGGCG 1 chr7:43622422-43622502 ( 63) AGAGGGCG 1 chr11:66462304-66462384 ( 3) AGAGGGCG 1 chr2:26726402-26726482 ( 45) AGAGGGCG 1 chr11:66176036-66176116 ( 3) AGAGGGCG 1 chr16:57683081-57683161 ( 69) AGAGGGCG 1 chr14:105947327-10594740 ( 43) AGAGGGCG 1 chr19:17371825-17371905 ( 25) AGAGGGCG 1 chr5:137688179-137688259 ( 16) AGGGGGCA 1 chr1:24136318-24136398 ( 63) AGGGGGCA 1 chr5:139742913-139742993 ( 27) AGGGGGCA 1 chr19:14667594-14667674 ( 45) AGGGGGCA 1 chr5:176736806-176736886 ( 64) AGGGGGCA 1 chr8:22432000-22432080 ( 20) AGGGGGCA 1 chr16:67850588-67850668 ( 9) AGGGGGCA 1 chr22:23053347-23053427 ( 42) AGGGGGCA 1 chr22:22936633-22936713 ( 44) AGGGGGCA 1 chr16:30996394-30996474 ( 47) AGGGGGCG 1 chr7:5526651-5526731 ( 3) AGGGGGCG 1 chr19:46320541-46320621 ( 1) AGGGGGCG 1 chr12:22697489-22697569 ( 42) AGGGGGCG 1 chr19:6517027-6517107 ( 36) AGGGGGCG 1 chr1:38276858-38276938 ( 56) AGGGGGCG 1 chr19:51925343-51925423 ( 11) AGGGGGCG 1 chr19:52111341-52111421 ( 15) AGGGGGCG 1 chr22:22918935-22919015 ( 42) AGGGGGCG 1 chr7:150865431-150865511 ( 50) AGGGGGCG 1 chr3:43811076-43811156 ( 34) AGGGGGCG 1 chr17:43212769-43212849 ( 60) AGGGGGCG 1 chr19:17564405-17564485 ( 15) AGGGGGCG 1 chr22:21457227-21457307 ( 30) AGGGGGCG 1 chr22:22415108-22415188 ( 49) AGGGGGCG 1 chr1:208305664-208305744 ( 46) AGGGGGCG 1 chr22:22454818-22454898 ( 26) AGATGGCA 1 chr16:83960390-83960470 ( 51) AGATGGCG 1 chr11:62673563-62673643 ( 52) AGATGGCG 1 chr16:85309359-85309439 ( 41) AGATGGCG 1 chr17:73841452-73841532 ( 35) AGGTGGCA 1 chr10:82204556-82204636 ( 62) AGGTGGCA 1 chr5:134793280-134793360 ( 65) AGGTGGCA 1 chr6:33247894-33247974 ( 71) AGAGGGAA 1 chr19:12947239-12947319 ( 41) AGAGGGAA 1 chr9:130880017-130880097 ( 31) AGGTGGCA 1 chr5:95194570-95194650 ( 33) AGGTGGCG 1 chr5:10284228-10284308 ( 63) AGGTGGCG 1 chr14:90865997-90866077 ( 38) AGGTGGCG 1 chr6:119558589-119558669 ( 42) AGAGGGAG 1 chr1:61515704-61515784 ( 31) AGGTGGCG 1 chr11:65652245-65652325 ( 43) AGAGGGAG 1 chr16:2073257-2073337 ( 30) AGGTGGCG 1 chr22:23301537-23301617 ( 41) AGGTGGCG 1 chr22:23035393-23035473 ( 49) AGGGGGAA 1 chr22:23096189-23096269 ( 31) AGGGGGAA 1 chr22:22067568-22067648 ( 68) AGGGGGAA 1 chr16:85450132-85450212 ( 20) AGGGGGAG 1 chr1:9687154-9687234 ( 29) AGGGGGAG 1 chr22:22697326-22697406 ( 49) AGGGGGAG 1 chr2:135208580-135208660 ( 60) AGGGGGAG 1 chr17:72861137-72861217 ( 52) AGATGGAG 1 chr4:6548486-6548566 ( 68) AAAGGGCA 1 chr19:14542829-14542909 ( 26) AAAGGGCG 1 chr18:61034918-61034998 ( 2) AAAGGGCG 1 chr7:157091309-157091389 ( 28) AGGAGGCA 1 chr1:26560389-26560469 ( 67) AAGGGGCA 1 chr7:105650056-105650136 ( 37) AGGAGGCG 1 chr6:2952912-2952992 ( 19) AGGAGGCG 1 chr16:33619109-33619189 ( 57) AGGAGGCG 1 chr19:1837734-1837814 ( 58) AGGTGGAG 1 chr17:48157152-48157232 ( 56) AGGAGGCG 1 chr15:56538363-56538443 ( 26) AGAGGGCT 1 chr19:13228903-13228983 ( 48) AAGGGGCG 1 chr1:6550056-6550136 ( 63) AGAGGGCT 1 chr7:73149171-73149251 ( 54) AGGGGGCT 1 chr1:150952072-150952152 ( 46) AGGGGGCT 1 chr10:95462371-95462451 ( 6) AAATGGCA 1 chr1:155057324-155057404 ( 44) AGAAGGAG 1 chr22:22958736-22958816 ( 61) AAAGGGAA 1 chr15:40567015-40567095 ( 62) AAGTGGCA 1 chr11:46615615-46615695 ( 3) AGGAGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.67961 E= 6.4e-037 246 -1320 -1320 -1320 -109 -1320 151 -1320 123 -1320 83 -1320 -128 -1320 119 10 -1320 -1320 163 -1320 -1320 -1320 163 -1320 -9 138 -1320 -1320 108 -1320 83 -207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 94 E= 6.4e-037 1.000000 0.000000 0.000000 0.000000 0.085106 0.000000 0.914894 0.000000 0.425532 0.000000 0.574468 0.000000 0.074468 0.000000 0.734043 0.191489 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.170213 0.829787 0.000000 0.000000 0.382979 0.000000 0.574468 0.042553 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-2 regular expression -------------------------------------------------------------------------------- AG[GA]GGGC[GA] -------------------------------------------------------------------------------- Time 8.67 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTGWTTT MEME-3 width = 8 sites = 2 llr = 25 E-value = 2.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::5::: pos.-specific C :::::::: probability G :::a:::: matrix T aaa:5aaa bits 2.5 *** *** 2.2 *** *** 2.0 *** *** 1.7 **** *** Relative 1.5 ******** Entropy 1.2 ******** (18.0 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTTGATTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:8617871-8617951 4 3.68e-06 AAC TTTGTTTT CCCCAGCATT chr1:26123458-26123538 11 3.68e-06 AAAATCCTAA TTTGATTT GATTCCCTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:8617871-8617951 3.7e-06 3_[+3]_69 chr1:26123458-26123538 3.7e-06 10_[+3]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTGWTTT width=8 seqs=2 chr16:8617871-8617951 ( 4) TTTGTTTT 1 chr1:26123458-26123538 ( 11) TTTGATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 2.1e+004 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 -765 -765 163 -765 146 -765 -765 148 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.1e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTGWTTT MEME-3 regular expression -------------------------------------------------------------------------------- TTTG[AT]TTT -------------------------------------------------------------------------------- Time 12.16 secs. ******************************************************************************** ******************************************************************************** MOTIF AKTTTTAT MEME-4 width = 8 sites = 2 llr = 26 E-value = 2.0e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A a:::::a: pos.-specific C :::::::: probability G :5:::::: matrix T :5aaaa:a bits 2.5 * ****** 2.2 * ****** 2.0 * ****** 1.7 * ****** Relative 1.5 * ****** Entropy 1.2 * ****** (18.4 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGTTTTAT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:112050385-112050465 21 1.04e-06 AAAGCCTTAC ATTTTTAT AGAGCTTCAT chr22:35653365-35653445 15 2.93e-06 GCAGGCTCCG AGTTTTAT TCGATGCGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:112050385-112050465 1e-06 20_[+4]_52 chr22:35653365-35653445 2.9e-06 14_[+4]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AKTTTTAT width=8 seqs=2 chr1:112050385-112050465 ( 21) ATTTTTAT 1 chr22:35653365-35653445 ( 15) AGTTTTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 2.0e+004 246 -765 -765 -765 -765 -765 63 148 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 246 -765 -765 -765 -765 -765 -765 248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.0e+004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AKTTTTAT MEME-4 regular expression -------------------------------------------------------------------------------- A[GT]TTTTAT -------------------------------------------------------------------------------- Time 15.64 secs. ******************************************************************************** ******************************************************************************** MOTIF TKYATTTT MEME-5 width = 8 sites = 2 llr = 24 E-value = 8.0e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C ::5::::: probability G :5:::::: matrix T a55:aaaa bits 2.5 * ***** 2.2 * ***** 2.0 * ***** 1.7 * ***** Relative 1.5 * ***** Entropy 1.2 * ***** (17.0 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGCATTTT consensus TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:16332477-16332557 24 4.71e-06 TGGGTCTTGC TGTATTTT CAATGAACCA chr6:15691643-15691723 49 4.71e-06 ATCACCTCAT TTCATTTT CCCTGCGTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:16332477-16332557 4.7e-06 23_[+5]_49 chr6:15691643-15691723 4.7e-06 48_[+5]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TKYATTTT width=8 seqs=2 chr6:16332477-16332557 ( 24) TGTATTTT 1 chr6:15691643-15691723 ( 49) TTCATTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 8.0e+004 -765 -765 -765 248 -765 -765 63 148 -765 65 -765 148 246 -765 -765 -765 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 -765 -765 -765 248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 8.0e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.500000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKYATTTT MEME-5 regular expression -------------------------------------------------------------------------------- T[GT][CT]ATTTT -------------------------------------------------------------------------------- Time 19.12 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:23298186-23298266 1.55e-01 80 chr22:22936633-22936713 7.96e-03 43_[+2(9.24e-05)]_29 chr22:23301537-23301617 3.66e-01 80 chr22:23053347-23053427 3.30e-01 41_[+2(9.24e-05)]_31 chr20:26189575-26189655 9.01e-01 80 chr1:6550056-6550136 3.53e-02 44_[+1(5.93e-05)]_28 chr7:105683369-105683449 6.47e-01 80 chr16:67850588-67850668 1.79e-02 8_[+2(9.24e-05)]_64 chr21:27173992-27174072 7.15e-03 63_[+1(5.93e-05)]_9 chr19:17371825-17371905 1.52e-01 24_[+2(5.63e-05)]_48 chr15:40567015-40567095 4.11e-02 28_[+1(5.93e-05)]_44 chr8:22432000-22432080 3.26e-02 19_[+2(9.24e-05)]_53 chr22:23088281-23088361 7.92e-01 80 chr19:6460187-6460267 9.05e-01 80 chr12:54140553-54140633 9.76e-01 80 chr15:45410422-45410502 3.35e-02 80 chr16:2073257-2073337 3.18e-01 80 chr22:23298385-23298465 9.92e-01 80 chr1:150952072-150952152 2.49e-01 80 chr17:48246784-48246864 1.20e-02 49_[+2(2.03e-05)]_23 chr1:201482235-201482315 2.60e-01 80 chr22:22067568-22067648 4.31e-01 80 chr5:132155978-132156058 2.55e-01 80 chr22:22874529-22874609 4.10e-01 80 chr22:35653365-35653445 4.25e-05 14_[+4(2.93e-06)]_58 chr4:6548486-6548566 1.58e-02 80 chr1:113351975-113352055 8.90e-01 80 chr14:105947327-10594740 5.14e-03 42_[+2(5.63e-05)]_30 chr11:45939733-45939813 1.03e-01 80 chr17:72861137-72861217 2.64e-01 80 chr16:4304176-4304256 2.18e-01 80 chr1:51762650-51762730 2.18e-01 80 chr6:30421545-30421625 6.64e-01 80 chr19:8067409-8067489 3.34e-01 80 chr2:129079523-129079603 6.22e-01 80 chr10:97989390-97989470 1.09e-02 3_[+3(1.02e-05)]_69 chr16:2053980-2054060 9.74e-01 80 chr1:155220642-155220722 2.53e-01 80 chr15:77925957-77926037 9.61e-02 55_[+2(2.03e-05)]_17 chr9:130880017-130880097 3.10e-03 80 chr2:135208580-135208660 3.90e-01 80 chr1:208305664-208305744 2.55e-01 80 chr12:49736336-49736416 1.96e-01 39_[+1(5.93e-05)]_33 chr11:65652245-65652325 1.14e-03 80 chr16:56998632-56998712 4.15e-01 80 chr20:30200783-30200863 7.22e-01 80 chr6:156983236-156983316 1.80e-01 80 chr11:45793635-45793715 4.86e-01 80 chr22:22958736-22958816 1.15e-01 80 chr1:40781080-40781160 3.20e-02 80 chr7:128523776-128523856 3.71e-01 43_[+1(9.30e-05)]_29 chr22:39925310-39925390 9.55e-01 80 chr6:30098936-30099016 1.50e-01 51_[+1(9.30e-05)]_21 chr1:38325902-38325982 3.07e-02 40_[+1(9.30e-05)]_32 chr1:61515704-61515784 1.62e-01 80 chr1:27324282-27324362 1.21e-02 21_[+2(2.03e-05)]_51 chr16:57683081-57683161 3.02e-02 68_[+2(5.63e-05)]_4 chr19:50175694-50175774 4.59e-02 80 chr22:22415108-22415188 1.92e-01 80 chr6:37321745-37321825 6.02e-01 80 chr11:66176036-66176116 2.99e-01 2_[+2(5.63e-05)]_70 chr22:23096189-23096269 5.57e-01 80 chr17:27077213-27077293 8.53e-02 80 chr19:13228903-13228983 7.56e-01 80 chr22:23035393-23035473 4.82e-01 80 chr1:23730554-23730634 4.24e-03 55_[+1(9.30e-05)]_17 chr5:176736806-176736886 4.78e-03 63_[+2(9.24e-05)]_9 chr17:44913378-44913458 2.37e-01 80 chr12:57856530-57856610 7.65e-04 22_[+2(2.03e-05)]_50 chr17:36754958-36755038 4.23e-01 80 chr11:61348974-61349054 9.03e-01 80 chr15:31196001-31196081 9.40e-01 80 chr17:48157152-48157232 6.10e-01 80 chr12:57632978-57633058 1.57e-01 25_[+1(5.93e-05)]_47 chr16:27214760-27214840 9.91e-01 80 chr1:24194890-24194970 2.86e-01 80 chr22:21457227-21457307 4.22e-02 80 chr1:209921153-209921233 7.11e-01 80 chr18:9771636-9771716 9.97e-01 80 chr19:1837734-1837814 3.01e-01 80 chr3:195577910-195577990 7.54e-02 80 chr19:14667594-14667674 2.63e-01 44_[+2(9.24e-05)]_28 chr16:85309359-85309439 3.04e-01 80 chr1:26362582-26362662 5.68e-01 80 chr1:26690447-26690527 1.45e-01 41_[+1(5.93e-05)]_31 chr19:15543620-15543700 8.35e-01 80 chr2:26726402-26726482 1.33e-01 44_[+2(5.63e-05)]_28 chr1:156195346-156195426 1.47e-01 80 chr19:17564405-17564485 6.36e-02 80 chr19:12947239-12947319 7.81e-03 80 chr22:23088482-23088562 9.93e-01 80 chr1:202205631-202205711 2.46e-01 80 chr7:73149171-73149251 7.69e-03 80 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********************************************************************************