******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/TCF7L2.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr17:63557658-63557738 1.0000 80 chr8:37553213-37553293 1.0000 80 chr13:114520089-11452016 1.0000 80 chr5:133450364-133450444 1.0000 80 chr17:47308179-47308259 1.0000 80 chr4:109094494-109094574 1.0000 80 chr9:130538758-130538838 1.0000 80 chr19:56103086-56103166 1.0000 80 chr17:26124961-26125041 1.0000 80 chr19:49649544-49649624 1.0000 80 chr17:7743442-7743522 1.0000 80 chr19:49653080-49653160 1.0000 80 chr19:52552589-52552669 1.0000 80 chr21:35211780-35211860 1.0000 80 chr5:71528302-71528382 1.0000 80 chr7:20826520-20826600 1.0000 80 chr18:11987820-11987900 1.0000 80 chr1:16488989-16489069 1.0000 80 chr11:66034858-66034938 1.0000 80 chr10:120183449-12018352 1.0000 80 chr17:65990716-65990796 1.0000 80 chr14:21944669-21944749 1.0000 80 chr19:50268812-50268892 1.0000 80 chr16:4511432-4511512 1.0000 80 chr7:100084900-100084980 1.0000 80 chr16:29678110-29678190 1.0000 80 chr22:38859491-38859571 1.0000 80 chr9:115818989-115819069 1.0000 80 chr8:38644592-38644672 1.0000 80 chr9:126817206-126817286 1.0000 80 chr14:52118270-52118350 1.0000 80 chr4:3838517-3838597 1.0000 80 chrX:48754567-48754647 1.0000 80 chr2:217277418-217277498 1.0000 80 chr11:62475056-62475136 1.0000 80 chr17:41649930-41650010 1.0000 80 chr12:71834714-71834794 1.0000 80 chr3:71191709-71191789 1.0000 80 chr16:50501991-50502071 1.0000 80 chr11:47291586-47291666 1.0000 80 chr8:17013368-17013448 1.0000 80 chr6:90813314-90813394 1.0000 80 chr10:101380326-10138040 1.0000 80 chr2:171571722-171571802 1.0000 80 chr19:52511480-52511560 1.0000 80 chr19:46032103-46032183 1.0000 80 chr22:37415605-37415685 1.0000 80 chr17:55362410-55362490 1.0000 80 chr1:1935263-1935343 1.0000 80 chrX:47180872-47180952 1.0000 80 chr3:133292704-133292784 1.0000 80 chr17:36955733-36955813 1.0000 80 chr22:18330325-18330405 1.0000 80 chr3:72201887-72201967 1.0000 80 chr5:89854409-89854489 1.0000 80 chr5:39218009-39218089 1.0000 80 chr9:98268259-98268339 1.0000 80 chr7:151329446-151329526 1.0000 80 chr12:104940489-10494056 1.0000 80 chr14:75348517-75348597 1.0000 80 chr1:23037118-23037198 1.0000 80 chr11:69808516-69808596 1.0000 80 chrX:152419873-152419953 1.0000 80 chr12:56224467-56224547 1.0000 80 chr7:104909591-104909671 1.0000 80 chr5:167756051-167756131 1.0000 80 chr2:175199620-175199700 1.0000 80 chrX:47225767-47225847 1.0000 80 chr6:43845672-43845752 1.0000 80 chr1:228665145-228665225 1.0000 80 chr22:36725466-36725546 1.0000 80 chr19:7717067-7717147 1.0000 80 chr10:73479744-73479824 1.0000 80 chr14:100070680-10007076 1.0000 80 chr1:147071663-147071743 1.0000 80 chr12:42632157-42632237 1.0000 80 chr4:153273982-153274062 1.0000 80 chrX:47880870-47880950 1.0000 80 chr7:99104122-99104202 1.0000 80 chr8:61149551-61149631 1.0000 80 chr10:75910595-75910675 1.0000 80 chr11:568704-568784 1.0000 80 chr15:63491332-63491412 1.0000 80 chrX:47420780-47420860 1.0000 80 chr17:55938533-55938613 1.0000 80 chr17:72414974-72415054 1.0000 80 chr10:135129957-13513003 1.0000 80 chrX:47050117-47050197 1.0000 80 chr15:57511486-57511566 1.0000 80 chr19:49141639-49141719 1.0000 80 chr3:48700320-48700400 1.0000 80 chr6:83073342-83073422 1.0000 80 chrX:43514010-43514090 1.0000 80 chr1:54886914-54886994 1.0000 80 chr18:499645-499725 1.0000 80 chrX:49022874-49022954 1.0000 80 chrX:153686491-153686571 1.0000 80 chr7:103634884-103634964 1.0000 80 chr12:89936886-89936966 1.0000 80 chr20:524572-524652 1.0000 80 chr10:77054719-77054799 1.0000 80 chr5:150326149-150326229 1.0000 80 chr11:125933051-12593313 1.0000 80 chr2:198380194-198380274 1.0000 80 chr10:94003161-94003241 1.0000 80 chr1:6550665-6550745 1.0000 80 chr3:25469878-25469958 1.0000 80 chr1:15944518-15944598 1.0000 80 chr19:37663727-37663807 1.0000 80 chr20:40322145-40322225 1.0000 80 chr19:49653628-49653708 1.0000 80 chr2:66660693-66660773 1.0000 80 chr9:130150803-130150883 1.0000 80 chr16:27240619-27240699 1.0000 80 chr1:110361068-110361148 1.0000 80 chrX:48768435-48768515 1.0000 80 chr15:65117970-65118050 1.0000 80 chr12:125093761-12509384 1.0000 80 chr3:195538805-195538885 1.0000 80 chrX:48755416-48755496 1.0000 80 chr19:52408293-52408373 1.0000 80 chr8:107669914-107669994 1.0000 80 chr19:41312788-41312868 1.0000 80 chr7:22723135-22723215 1.0000 80 chr7:43909090-43909170 1.0000 80 chrX:54835353-54835433 1.0000 80 chr10:17257115-17257195 1.0000 80 chr16:50582204-50582284 1.0000 80 chr15:40675035-40675115 1.0000 80 chr19:11877809-11877889 1.0000 80 chr14:39901503-39901583 1.0000 80 chr19:42806774-42806854 1.0000 80 chr7:110714984-110715064 1.0000 80 chr19:41104187-41104267 1.0000 80 chr22:39052509-39052589 1.0000 80 chr19:37701557-37701637 1.0000 80 chr11:62477054-62477134 1.0000 80 chr19:52490153-52490233 1.0000 80 chr16:55657107-55657187 1.0000 80 chr11:64433041-64433121 1.0000 80 chr9:35489954-35490034 1.0000 80 chr19:11849744-11849824 1.0000 80 chr11:72525238-72525318 1.0000 80 chr1:1624582-1624662 1.0000 80 chr1:147013204-147013284 1.0000 80 chr9:71788902-71788982 1.0000 80 chr19:50354324-50354404 1.0000 80 chr4:13486128-13486208 1.0000 80 chr1:27888724-27888804 1.0000 80 chr3:194406516-194406596 1.0000 80 chrX:153236514-153236594 1.0000 80 chr19:6737338-6737418 1.0000 80 chr22:20903624-20903704 1.0000 80 chr15:76067737-76067817 1.0000 80 chr8:107282306-107282386 1.0000 80 chr1:150488013-150488093 1.0000 80 chr10:130832379-13083245 1.0000 80 chr12:106696380-10669646 1.0000 80 chr17:36956237-36956317 1.0000 80 chr2:217082258-217082338 1.0000 80 chr2:131863878-131863958 1.0000 80 chrX:47342057-47342137 1.0000 80 chr9:6757188-6757268 1.0000 80 chr1:43609312-43609392 1.0000 80 chr20:32581499-32581579 1.0000 80 chr10:64028449-64028529 1.0000 80 chr11:82612591-82612671 1.0000 80 chr7:135335794-135335874 1.0000 80 chr1:36621683-36621763 1.0000 80 chr8:41435921-41436001 1.0000 80 chr20:814341-814421 1.0000 80 chr9:97325960-97326040 1.0000 80 chr11:70314712-70314792 1.0000 80 chr20:2295893-2295973 1.0000 80 chrX:48596002-48596082 1.0000 80 chrX:53024987-53025067 1.0000 80 chr9:34637812-34637892 1.0000 80 chr5:173345070-173345150 1.0000 80 chr14:57046406-57046486 1.0000 80 chr19:50179827-50179907 1.0000 80 chr15:48624195-48624275 1.0000 80 chr12:1703949-1704029 1.0000 80 chr5:180472145-180472225 1.0000 80 chr6:18269563-18269643 1.0000 80 chrX:47479310-47479390 1.0000 80 chr11:45921482-45921562 1.0000 80 chr7:99724834-99724914 1.0000 80 chr22:29279535-29279615 1.0000 80 chr21:44394216-44394296 1.0000 80 chr11:57103061-57103141 1.0000 80 chr7:2595238-2595318 1.0000 80 chr17:7387415-7387495 1.0000 80 chr12:104850629-10485070 1.0000 80 chr7:44152413-44152493 1.0000 80 chr4:42659350-42659430 1.0000 80 chr3:160473043-160473123 1.0000 80 chr19:46031599-46031679 1.0000 80 chr5:56459468-56459548 1.0000 80 chr3:12797393-12797473 1.0000 80 chr19:2163825-2163905 1.0000 80 chr1:205718043-205718123 1.0000 80 chr19:55678297-55678377 1.0000 80 chr10:103578300-10357838 1.0000 80 chr3:50358996-50359076 1.0000 80 chrX:47077908-47077988 1.0000 80 chr1:154909599-154909679 1.0000 80 chr13:76112096-76112176 1.0000 80 chr19:1873693-1873773 1.0000 80 chr10:104421036-10442111 1.0000 80 chr22:17850108-17850188 1.0000 80 chrX:49391848-49391928 1.0000 80 chr7:154794926-154795006 1.0000 80 chr12:25104901-25104981 1.0000 80 chr1:174277880-174277960 1.0000 80 chr11:129872461-12987254 1.0000 80 chrX:118708406-118708486 1.0000 80 chr9:15511061-15511141 1.0000 80 chr5:132202191-132202271 1.0000 80 chr10:99078886-99078966 1.0000 80 chr13:76123742-76123822 1.0000 80 chr5:42812090-42812170 1.0000 80 chr10:31532015-31532095 1.0000 80 chr1:32757447-32757527 1.0000 80 chr2:20298114-20298194 1.0000 80 chr11:74724334-74724414 1.0000 80 chr4:104119618-104119698 1.0000 80 chr16:88870063-88870143 1.0000 80 chr4:79875398-79875478 1.0000 80 chr3:156323990-156324070 1.0000 80 chr19:18315357-18315437 1.0000 80 chr2:113299561-113299641 1.0000 80 chr9:135285413-135285493 1.0000 80 chr14:89493753-89493833 1.0000 80 chr17:63556835-63556915 1.0000 80 chr19:12900867-12900947 1.0000 80 chrX:47696077-47696157 1.0000 80 chr3:46464320-46464400 1.0000 80 chr14:69658124-69658204 1.0000 80 chr13:115078836-11507891 1.0000 80 chr12:30848853-30848933 1.0000 80 chr1:19229167-19229247 1.0000 80 chr15:71544682-71544762 1.0000 80 chr3:151769651-151769731 1.0000 80 chr5:176433812-176433892 1.0000 80 chr19:50316945-50317025 1.0000 80 chr9:33375438-33375518 1.0000 80 chr19:40790985-40791065 1.0000 80 chr1:204476981-204477061 1.0000 80 chr21:43472055-43472135 1.0000 80 chr16:84077211-84077291 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_TCF7L2/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/TCF7L2.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.205 C 0.298 G 0.295 T 0.201 Background letter frequencies (from file dataset with add-one prior applied): A 0.206 C 0.298 G 0.295 T 0.201 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CTTYRAWG MEME-1 width = 8 sites = 63 llr = 499 E-value = 3.8e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :1:14a7: pos.-specific C 9::3:::2 probability G ::::6::8 matrix T :9a5::3: bits 2.3 * * 2.1 * * 1.9 ** * 1.6 ** * Relative 1.4 *** ** Entropy 1.2 *** ** (11.4 bits) 0.9 *** **** 0.7 *** **** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTTGAAG consensus CA TC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:2295893-2295973 60 1.52e-05 CTGTGCGGAG CTTTGAAG TGCTCAGCTT chr2:198380194-198380274 36 1.52e-05 AAGTCCTTGG CTTTGAAG TCGCCGGATG chr17:55938533-55938613 31 1.52e-05 tctgagttcc ctttgaag tctgaaattG chr16:50501991-50502071 21 1.52e-05 GCCGCTGGCG CTTTGAAG TGAGCCGCTG chr12:71834714-71834794 43 1.52e-05 CCGCGCCGCC CTTTGAAG TGCCCGCGGC chr10:120183449-12018352 24 1.52e-05 CAGCCGGTGG CTTTGAAG TCTCCAGAGT chr7:20826520-20826600 30 1.52e-05 CCCTCTCCGG CTTTGAAG TGCCGCGGAG chr4:109094494-109094574 30 1.52e-05 gcggcgcggc cTTTGAAG TCGCGGCGGC chr8:37553213-37553293 31 1.52e-05 GCGGCGATCC CTTTGAAG TGTGGCTGCC chr14:89493753-89493833 27 3.00e-05 AGGCGCGGCG CTTTGATG TCGCGCGGCC chr19:37701557-37701637 72 3.00e-05 GGGTCGCCAT CTTTGATG C chr16:50582204-50582284 19 3.00e-05 CCAGCCTTGC CTTTGATG CGCCGCACCG chr18:499645-499725 12 3.00e-05 CTGAACGACT CTTTGATG CCTCCGCTGC chr17:72414974-72415054 34 3.00e-05 TGATAATTGC CTTTGATG TCCCGGAAGA chr2:171571722-171571802 16 3.00e-05 AGCCGCTATT CTTTGATG ATTGGGTAGC chr1:16488989-16489069 27 3.00e-05 TCCTGGGAGC CTTTGATG TGGGTTCTTG chr5:133450364-133450444 24 3.00e-05 ccggcggcgc cTTTGATG TTCCGACCCG chr17:63556835-63556915 42 5.25e-05 GGCCTGCCAA CTTCAAAG GGCCGCCCCG chr3:12797393-12797473 22 5.25e-05 tgacaagtga cttcaaag agtctctgca chr12:125093761-12509384 42 5.25e-05 CTGGCTGGGA CTTCAAAG GAAAGCGCCG chr10:77054719-77054799 28 5.25e-05 TGGCAGAGCA CTTCAAAG GCCTACGGGT chr10:75910595-75910675 36 5.25e-05 TGATTAACAG CTTCAAAG ACACCGACTC chr8:61149551-61149631 11 5.25e-05 ACAAGACTCA CTTCAAAG CCTAACCGCC chr2:175199620-175199700 31 5.25e-05 GCCAGCGGCA CTTCAAAG CGGGTGCTCC chr5:39218009-39218089 18 5.25e-05 CTGGTAAAAG CTTCAAAG CCACCGCCTG chr8:38644592-38644672 40 5.25e-05 GCGCGGCCGT CTTCAAAg ccccggcgcc chr5:71528302-71528382 36 5.25e-05 GTGGAAGGCA CTTCAAAG GCTTCTTGCA chr17:26124961-26125041 25 5.25e-05 atcatatgaa cttcaaag agccgccaca chr19:11849744-11849824 41 6.78e-05 TCCGCGGGCT CTTTGAAC GTCGCACCCT chr9:130150803-130150883 18 6.78e-05 TACCTCATCG CTTTGAAC ACAGCGCTTT chr5:42812090-42812170 38 8.34e-05 TTGTTATCAA CTTAAAAG AAAGTAGCAA chr9:97325960-97326040 33 8.34e-05 CTGCAGCAAT CTTAAAAG AGCCGCTAAA chr17:55362410-55362490 19 8.34e-05 GCGTCGGTTT CTTAGAAG TTTCTTCTTT chr10:101380326-10138040 56 8.34e-05 CCCCTTTGAT CTTAGAAG CTTCTTGTTT chr11:74724334-74724414 62 1.36e-04 GCCATCCTCC CTTTGATC TCCATTATCC chr10:31532015-31532095 24 1.36e-04 GTCAAGGGCC CTTTGATC TGCCCACCAG chr6:18269563-18269643 49 1.36e-04 CTCTAGGCTA CTTTGATC TTGTAGATCT chr19:7717067-7717147 43 1.36e-04 TTCCCGGTTT CTTTGATC TTCCGCGTCT chrX:152419873-152419953 47 1.36e-04 ATAAGGCTCT CATTGAAG GAAGTGATTT chr12:104940489-10494056 12 1.36e-04 CCTGCAGCTG CTTTGATC TAACTTCCTC chr6:90813314-90813394 15 1.36e-04 ATTGACGGCA CTTTGATC ACGATGACTG chr4:3838517-3838597 35 1.36e-04 CACAGTTTTG CTTTGATC CCCATTGACC chr17:7387415-7387495 23 1.74e-04 ACCCTCGAGT CTTCAAAC CTTAAGCCTC chr15:48624195-48624275 69 1.74e-04 CCGAGAAGGG CTTCAAAC CCAA chr12:42632157-42632237 59 1.74e-04 GCGCCGGAGA CTTCAAAC GCGGCCAGCG chr1:174277880-174277960 46 1.84e-04 ttgcactaga ttttgaag tcagatagtg chr21:43472055-43472135 8 2.80e-04 CCCTCAA CATCAAAG CCCTTTTGTG chr4:104119618-104119698 71 2.80e-04 AGGAGAGGGG ATTTAAAG GG chr7:135335794-135335874 39 2.80e-04 GTAGGGACCA CATCAAAG GCAGCCTCCA chr16:55657107-55657187 21 2.80e-04 CCTTGAGCCA CATCAAAG GCTTGCACTT chrX:54835353-54835433 36 2.80e-04 GCACGGTGGA CATCAAAG AAAGGGCTCG chr17:47308179-47308259 37 2.80e-04 TGCCGGCGCA CATCAAAG GGGCGGGCCG chr13:114520089-11452016 55 2.80e-04 GACGCGGCCA CATCAAAG GACCCCACCT chr16:84077211-84077291 52 3.28e-04 AAAGGCTTCT TTTTGATG TGGTTTCTAA chrX:47342057-47342137 57 3.28e-04 GAGCCGCCAT CTTGGAAG GGCGGTCATT chr3:25469878-25469958 71 3.28e-04 CAAGCATTTA CTTGGAAG GA chr20:40322145-40322225 67 3.74e-04 ACCCACCGTA CTTAGATC AGGCTG chr11:125933051-12593313 18 3.74e-04 CCCAGGGGAG CATAGAAG AGGCTTTTCT chr6:83073342-83073422 57 3.74e-04 AGTCTCTCTT CTTAAATC CCCCTACCTA chr9:15511061-15511141 47 4.16e-04 CCCAAGTTCG CTTTCATG TAACAGGTGC chr10:104421036-10442111 50 4.16e-04 GGCCCCAGCT CTTTCATG TTGCCGCCCT chr11:64433041-64433121 4 4.16e-04 ACC ATTTAATG TAAAGCCCGG chr8:107669914-107669994 51 5.02e-04 TCATTTTGCA TTTAGAAG CCACAAGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:2295893-2295973 1.5e-05 59_[+1]_13 chr2:198380194-198380274 1.5e-05 35_[+1]_37 chr17:55938533-55938613 1.5e-05 30_[+1]_42 chr16:50501991-50502071 1.5e-05 20_[+1]_52 chr12:71834714-71834794 1.5e-05 42_[+1]_30 chr10:120183449-12018352 1.5e-05 23_[+1]_49 chr7:20826520-20826600 1.5e-05 29_[+1]_43 chr4:109094494-109094574 1.5e-05 29_[+1]_43 chr8:37553213-37553293 1.5e-05 30_[+1]_42 chr14:89493753-89493833 3e-05 26_[+1]_46 chr19:37701557-37701637 3e-05 71_[+1]_1 chr16:50582204-50582284 3e-05 18_[+1]_54 chr18:499645-499725 3e-05 11_[+1]_61 chr17:72414974-72415054 3e-05 33_[+1]_39 chr2:171571722-171571802 3e-05 15_[+1]_57 chr1:16488989-16489069 3e-05 26_[+1]_46 chr5:133450364-133450444 3e-05 23_[+1]_49 chr17:63556835-63556915 5.2e-05 41_[+1]_31 chr3:12797393-12797473 5.2e-05 21_[+1]_51 chr12:125093761-12509384 5.2e-05 41_[+1]_31 chr10:77054719-77054799 5.2e-05 27_[+1]_45 chr10:75910595-75910675 5.2e-05 35_[+1]_37 chr8:61149551-61149631 5.2e-05 10_[+1]_62 chr2:175199620-175199700 5.2e-05 30_[+1]_42 chr5:39218009-39218089 5.2e-05 17_[+1]_55 chr8:38644592-38644672 5.2e-05 39_[+1]_33 chr5:71528302-71528382 5.2e-05 35_[+1]_37 chr17:26124961-26125041 5.2e-05 24_[+1]_48 chr19:11849744-11849824 6.8e-05 40_[+1]_32 chr9:130150803-130150883 6.8e-05 17_[+1]_55 chr5:42812090-42812170 8.3e-05 37_[+1]_35 chr9:97325960-97326040 8.3e-05 32_[+1]_40 chr17:55362410-55362490 8.3e-05 18_[+1]_54 chr10:101380326-10138040 8.3e-05 55_[+1]_17 chr11:74724334-74724414 0.00014 61_[+1]_11 chr10:31532015-31532095 0.00014 23_[+1]_49 chr6:18269563-18269643 0.00014 48_[+1]_24 chr19:7717067-7717147 0.00014 42_[+1]_30 chrX:152419873-152419953 0.00014 46_[+1]_26 chr12:104940489-10494056 0.00014 11_[+1]_61 chr6:90813314-90813394 0.00014 14_[+1]_58 chr4:3838517-3838597 0.00014 34_[+1]_38 chr17:7387415-7387495 0.00017 22_[+1]_50 chr15:48624195-48624275 0.00017 68_[+1]_4 chr12:42632157-42632237 0.00017 58_[+1]_14 chr1:174277880-174277960 0.00018 45_[+1]_27 chr21:43472055-43472135 0.00028 7_[+1]_65 chr4:104119618-104119698 0.00028 70_[+1]_2 chr7:135335794-135335874 0.00028 38_[+1]_34 chr16:55657107-55657187 0.00028 20_[+1]_52 chrX:54835353-54835433 0.00028 35_[+1]_37 chr17:47308179-47308259 0.00028 36_[+1]_36 chr13:114520089-11452016 0.00028 54_[+1]_18 chr16:84077211-84077291 0.00033 51_[+1]_21 chrX:47342057-47342137 0.00033 56_[+1]_16 chr3:25469878-25469958 0.00033 70_[+1]_2 chr20:40322145-40322225 0.00037 66_[+1]_6 chr11:125933051-12593313 0.00037 17_[+1]_55 chr6:83073342-83073422 0.00037 56_[+1]_16 chr9:15511061-15511141 0.00042 46_[+1]_26 chr10:104421036-10442111 0.00042 49_[+1]_23 chr11:64433041-64433121 0.00042 3_[+1]_69 chr8:107669914-107669994 0.0005 50_[+1]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTYRAWG width=8 seqs=63 chr20:2295893-2295973 ( 60) CTTTGAAG 1 chr2:198380194-198380274 ( 36) CTTTGAAG 1 chr17:55938533-55938613 ( 31) CTTTGAAG 1 chr16:50501991-50502071 ( 21) CTTTGAAG 1 chr12:71834714-71834794 ( 43) CTTTGAAG 1 chr10:120183449-12018352 ( 24) CTTTGAAG 1 chr7:20826520-20826600 ( 30) CTTTGAAG 1 chr4:109094494-109094574 ( 30) CTTTGAAG 1 chr8:37553213-37553293 ( 31) CTTTGAAG 1 chr14:89493753-89493833 ( 27) CTTTGATG 1 chr19:37701557-37701637 ( 72) CTTTGATG 1 chr16:50582204-50582284 ( 19) CTTTGATG 1 chr18:499645-499725 ( 12) CTTTGATG 1 chr17:72414974-72415054 ( 34) CTTTGATG 1 chr2:171571722-171571802 ( 16) CTTTGATG 1 chr1:16488989-16489069 ( 27) CTTTGATG 1 chr5:133450364-133450444 ( 24) CTTTGATG 1 chr17:63556835-63556915 ( 42) CTTCAAAG 1 chr3:12797393-12797473 ( 22) CTTCAAAG 1 chr12:125093761-12509384 ( 42) CTTCAAAG 1 chr10:77054719-77054799 ( 28) CTTCAAAG 1 chr10:75910595-75910675 ( 36) CTTCAAAG 1 chr8:61149551-61149631 ( 11) CTTCAAAG 1 chr2:175199620-175199700 ( 31) CTTCAAAG 1 chr5:39218009-39218089 ( 18) CTTCAAAG 1 chr8:38644592-38644672 ( 40) CTTCAAAG 1 chr5:71528302-71528382 ( 36) CTTCAAAG 1 chr17:26124961-26125041 ( 25) CTTCAAAG 1 chr19:11849744-11849824 ( 41) CTTTGAAC 1 chr9:130150803-130150883 ( 18) CTTTGAAC 1 chr5:42812090-42812170 ( 38) CTTAAAAG 1 chr9:97325960-97326040 ( 33) CTTAAAAG 1 chr17:55362410-55362490 ( 19) CTTAGAAG 1 chr10:101380326-10138040 ( 56) CTTAGAAG 1 chr11:74724334-74724414 ( 62) CTTTGATC 1 chr10:31532015-31532095 ( 24) CTTTGATC 1 chr6:18269563-18269643 ( 49) CTTTGATC 1 chr19:7717067-7717147 ( 43) CTTTGATC 1 chrX:152419873-152419953 ( 47) CATTGAAG 1 chr12:104940489-10494056 ( 12) CTTTGATC 1 chr6:90813314-90813394 ( 15) CTTTGATC 1 chr4:3838517-3838597 ( 35) CTTTGATC 1 chr17:7387415-7387495 ( 23) CTTCAAAC 1 chr15:48624195-48624275 ( 69) CTTCAAAC 1 chr12:42632157-42632237 ( 59) CTTCAAAC 1 chr1:174277880-174277960 ( 46) TTTTGAAG 1 chr21:43472055-43472135 ( 8) CATCAAAG 1 chr4:104119618-104119698 ( 71) ATTTAAAG 1 chr7:135335794-135335874 ( 39) CATCAAAG 1 chr16:55657107-55657187 ( 21) CATCAAAG 1 chrX:54835353-54835433 ( 36) CATCAAAG 1 chr17:47308179-47308259 ( 37) CATCAAAG 1 chr13:114520089-11452016 ( 55) CATCAAAG 1 chr16:84077211-84077291 ( 52) TTTTGATG 1 chrX:47342057-47342137 ( 57) CTTGGAAG 1 chr3:25469878-25469958 ( 71) CTTGGAAG 1 chr20:40322145-40322225 ( 67) CTTAGATC 1 chr11:125933051-12593313 ( 18) CATAGAAG 1 chr6:83073342-83073422 ( 57) CTTAAATC 1 chr9:15511061-15511141 ( 47) CTTTCATG 1 chr10:104421036-10442111 ( 50) CTTTCATG 1 chr11:64433041-64433121 ( 4) ATTTAATG 1 chr8:107669914-107669994 ( 51) TTTAGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.89709 E= 3.8e-020 -269 162 -1262 -208 -69 -1262 -1262 212 -1262 -1262 -1262 231 -69 9 -321 138 95 -323 95 -1262 228 -1262 -1262 -1262 170 -1262 -1262 73 -1262 -43 140 -1262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 63 E= 3.8e-020 0.031746 0.920635 0.000000 0.047619 0.126984 0.000000 0.000000 0.873016 0.000000 0.000000 0.000000 1.000000 0.126984 0.317460 0.031746 0.523810 0.396825 0.031746 0.571429 0.000000 1.000000 0.000000 0.000000 0.000000 0.666667 0.000000 0.000000 0.333333 0.000000 0.222222 0.777778 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTYRAWG MEME-1 regular expression -------------------------------------------------------------------------------- CTT[TC][GA]A[AT][GC] -------------------------------------------------------------------------------- Time 4.97 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTGGTAS MEME-2 width = 8 sites = 16 llr = 153 E-value = 9.1e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::::a: pos.-specific C 7::::::6 probability G 3::9a::3 matrix T :aa1:a:1 bits 2.3 ** ** 2.1 ** ** 1.9 ** *** 1.6 ** *** Relative 1.4 ****** Entropy 1.2 ****** (13.8 bits) 0.9 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTGGTAC consensus G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:151769651-151769731 7 1.29e-05 GTACAT CTTGGTAC AGTCTGAAGT chr2:20298114-20298194 72 1.29e-05 CAGGTCAGCA CTTGGTAC G chr1:32757447-32757527 72 1.29e-05 TGTCGCAGAC CTTGGTAC A chrX:118708406-118708486 20 1.29e-05 CCCGCCCCGT CTTGGTAC GGCCTGTCCG chr1:36621683-36621763 28 1.29e-05 CCGCCTCGAA CTTGGTAC GCGCCAGCGA chr19:50354324-50354404 26 1.29e-05 cccgcgccgc cTTGGTAC GCTCCGGCCA chr7:151329446-151329526 41 1.29e-05 CCCCCCGCGC CTTGGTAC GGCCCGCCCG chr8:107282306-107282386 62 2.57e-05 GCTGCCGGCT CTTGGTAG CTTCCACGCG chr19:52408293-52408373 64 2.57e-05 GCGCGGCCAT CTTGGTAG ATCTGCCGT chr1:16488989-16489069 41 2.57e-05 GATGTGGGTT CTTGGTAG ATCCTGCCCG chrX:47880870-47880950 65 3.85e-05 GAAGGCTCAG GTTGGTAC AGTCCGTT chr16:4511432-4511512 38 3.85e-05 TTACTGCTGT GTTGGTAC AGCCCTGGAG chr4:79875398-79875478 11 5.99e-05 GCAACATATC GTTGGTAG GGGGCAATGC chr11:62475056-62475136 63 6.85e-05 TGGCCAGGCA GTTGGTAT GCTCCAGGAT chr16:29678110-29678190 70 6.85e-05 GGCCAGGGCA GTTGGTAT TTC chr9:33375438-33375518 37 8.61e-05 tagggtgggc ctttgtag gccatgggaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:151769651-151769731 1.3e-05 6_[+2]_66 chr2:20298114-20298194 1.3e-05 71_[+2]_1 chr1:32757447-32757527 1.3e-05 71_[+2]_1 chrX:118708406-118708486 1.3e-05 19_[+2]_53 chr1:36621683-36621763 1.3e-05 27_[+2]_45 chr19:50354324-50354404 1.3e-05 25_[+2]_47 chr7:151329446-151329526 1.3e-05 40_[+2]_32 chr8:107282306-107282386 2.6e-05 61_[+2]_11 chr19:52408293-52408373 2.6e-05 63_[+2]_9 chr1:16488989-16489069 2.6e-05 40_[+2]_32 chrX:47880870-47880950 3.9e-05 64_[+2]_8 chr16:4511432-4511512 3.9e-05 37_[+2]_35 chr4:79875398-79875478 6e-05 10_[+2]_62 chr11:62475056-62475136 6.9e-05 62_[+2]_10 chr16:29678110-29678190 6.9e-05 69_[+2]_3 chr9:33375438-33375518 8.6e-05 36_[+2]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTGGTAS width=8 seqs=16 chr3:151769651-151769731 ( 7) CTTGGTAC 1 chr2:20298114-20298194 ( 72) CTTGGTAC 1 chr1:32757447-32757527 ( 72) CTTGGTAC 1 chrX:118708406-118708486 ( 20) CTTGGTAC 1 chr1:36621683-36621763 ( 28) CTTGGTAC 1 chr19:50354324-50354404 ( 26) CTTGGTAC 1 chr7:151329446-151329526 ( 41) CTTGGTAC 1 chr8:107282306-107282386 ( 62) CTTGGTAG 1 chr19:52408293-52408373 ( 64) CTTGGTAG 1 chr1:16488989-16489069 ( 41) CTTGGTAG 1 chrX:47880870-47880950 ( 65) GTTGGTAC 1 chr16:4511432-4511512 ( 38) GTTGGTAC 1 chr4:79875398-79875478 ( 11) GTTGGTAG 1 chr11:62475056-62475136 ( 63) GTTGGTAT 1 chr16:29678110-29678190 ( 70) GTTGGTAT 1 chr9:33375438-33375518 ( 37) CTTTGTAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.8918 E= 9.1e+001 -1064 120 8 -1064 -1064 -1064 -1064 231 -1064 -1064 -1064 231 -1064 -1064 167 -168 -1064 -1064 176 -1064 -1064 -1064 -1064 231 228 -1064 -1064 -1064 -1064 91 8 -68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 9.1e+001 0.000000 0.687500 0.312500 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.937500 0.062500 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.562500 0.312500 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTGGTAS MEME-2 regular expression -------------------------------------------------------------------------------- [CG]TTGGTA[CG] -------------------------------------------------------------------------------- Time 8.68 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTKGTTT MEME-3 width = 8 sites = 11 llr = 112 E-value = 4.7e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::2::: pos.-specific C ::::1::: probability G :3:57::: matrix T a7a5:aaa bits 2.3 * * *** 2.1 * * *** 1.9 * * *** 1.6 * * *** Relative 1.4 *** *** Entropy 1.2 **** *** (14.7 bits) 0.9 **** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTTTGTTT consensus G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:55678297-55678377 4 3.91e-06 TTT TTTTGTTT TCTTCATATG chr6:90813314-90813394 48 3.91e-06 GGTGATGCTT TTTTGTTT GCTTTTTAAA chrX:48755416-48755496 20 9.65e-06 ATCCCAGCGC TTTGGTTT CTCCCACCCG chrX:152419873-152419953 21 9.65e-06 ATTTCTTCCA TTTGGTTT TCTCCCAAAT chr17:65990716-65990796 67 9.65e-06 AACAGAACTA TTTGGTTT TCCCAT chr2:217082258-217082338 29 1.24e-05 ggacttagga ttttattt ttagtttgca chr20:524572-524652 72 1.24e-05 GTTAAGCGCA TTTTATTT C chr1:174277880-174277960 14 1.81e-05 gctgatctca tgttgttt tggttacttt chr6:18269563-18269643 23 3.05e-05 CTTCCGTTTG TGTGGTTT AGTCATTGCT chr9:126817206-126817286 57 3.05e-05 CCTTCTTTGC TGTGGTTT CCTTGTAGGG chr9:98268259-98268339 2 3.45e-05 T TTTTCTTT GGACGCGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:55678297-55678377 3.9e-06 3_[+3]_69 chr6:90813314-90813394 3.9e-06 47_[+3]_25 chrX:48755416-48755496 9.6e-06 19_[+3]_53 chrX:152419873-152419953 9.6e-06 20_[+3]_52 chr17:65990716-65990796 9.6e-06 66_[+3]_6 chr2:217082258-217082338 1.2e-05 28_[+3]_44 chr20:524572-524652 1.2e-05 71_[+3]_1 chr1:174277880-174277960 1.8e-05 13_[+3]_59 chr6:18269563-18269643 3.1e-05 22_[+3]_50 chr9:126817206-126817286 3.1e-05 56_[+3]_16 chr9:98268259-98268339 3.4e-05 1_[+3]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTKGTTT width=8 seqs=11 chr19:55678297-55678377 ( 4) TTTTGTTT 1 chr6:90813314-90813394 ( 48) TTTTGTTT 1 chrX:48755416-48755496 ( 20) TTTGGTTT 1 chrX:152419873-152419953 ( 21) TTTGGTTT 1 chr17:65990716-65990796 ( 67) TTTGGTTT 1 chr2:217082258-217082338 ( 29) TTTTATTT 1 chr20:524572-524652 ( 72) TTTTATTT 1 chr1:174277880-174277960 ( 14) TGTTGTTT 1 chr6:18269563-18269643 ( 23) TGTGGTTT 1 chr9:126817206-126817286 ( 57) TGTGGTTT 1 chr9:98268259-98268339 ( 2) TTTTCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.2293 E= 4.7e+002 -1010 -1010 -1010 231 -1010 -1010 -11 185 -1010 -1010 -1010 231 -1010 -1010 62 144 -18 -171 130 -1010 -1010 -1010 -1010 231 -1010 -1010 -1010 231 -1010 -1010 -1010 231 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 11 E= 4.7e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.272727 0.727273 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.454545 0.545455 0.181818 0.090909 0.727273 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKGTTT MEME-3 regular expression -------------------------------------------------------------------------------- T[TG]T[TG]GTTT -------------------------------------------------------------------------------- Time 12.34 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAAKAAA MEME-4 width = 8 sites = 32 llr = 263 E-value = 4.9e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 888a178a pos.-specific C 1::::::: probability G 122:532: matrix T ::1:4::: bits 2.3 * * 2.1 * * 1.9 * * 1.6 * * Relative 1.4 ** * *** Entropy 1.2 **** *** (11.9 bits) 0.9 **** *** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAAAGAAA consensus TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:18315357-18315437 43 3.16e-06 TATGGGGTTC AAAATAAA TACCAAAGAA chr10:94003161-94003241 73 3.16e-06 AAAAGGGAAA AAAATAAA chr7:104909591-104909671 29 3.16e-06 TCAATTTAGC AAAATAAA ATACAAACAA chr13:76112096-76112176 31 7.81e-06 ACATTGAGCT AAAAGAAA ATTATTTTAT chr1:154909599-154909679 2 1.11e-05 G AAAAAAAA TCTCTGGAGT chr17:55362410-55362490 44 1.11e-05 TTTTCACCTT AAAAAAAA TTGTTTGCAT chr15:63491332-63491412 56 1.56e-05 TGGGAAGAGA AAAATGAA AACATTTCCC chr9:97325960-97326040 61 2.22e-05 CAAACAAAGA AAAAGGAA GTCacccatc chr10:130832379-13083245 30 2.22e-05 CAGTCCCTTC AAAAGGAA CCGGCTTCTG chr7:100084900-100084980 31 2.22e-05 TTCCATTCTC AAAAGGAA TTGGGGGGGT chr11:74724334-74724414 42 3.58e-05 caatAGGAAG AAGATAAA TTGCCATCCT chr15:71544682-71544762 71 4.91e-05 TGTAATCTAT AAAAGAGA CA chr4:13486128-13486208 14 4.91e-05 GTTGGCTAGA AGAAGAAA AGAAGTGTTC chr1:147013204-147013284 51 4.91e-05 AGGGGGAGTC AGAAGAAA AACAGATCAG chr9:98268259-98268339 36 4.91e-05 GGTGGGGGAG AGAAGAAA gccgggccgc chr17:41649930-41650010 20 4.91e-05 GCCTGTGGTG AAAAGAGA TCAGTGACTC chr17:36956237-36956317 39 5.58e-05 CAGCAAGGGG AAGAGAAA GTCCAGCCTA chr7:103634884-103634964 67 7.00e-05 gagatcagat aatataaa ggccct chr12:104940489-10494056 51 8.39e-05 GGACAAAACC AAAACAAA GCAAAACAAG chr19:55678297-55678377 56 9.78e-05 TTCATCAATT CAAATAAA GTGAAGTGTC chr8:107669914-107669994 63 1.02e-04 TAGAAGCCAC AAGAAAAA CTTTTCGAAA chr3:12797393-12797473 38 1.22e-04 agagtctctg caaagaaa ccgcggatgg chrX:53024987-53025067 27 1.22e-04 GGATTATTCC AAAATGGA CAGGCGGAGT chr19:50268812-50268892 5 1.22e-04 ATCC AAAATGGA CTTTCCCAGG chr13:115078836-11507891 22 1.29e-04 tttgtttttc aagatgaa agaggtacag chr17:7387415-7387495 46 1.52e-04 GCCTCAGTGC AAAAGGGA GCAGCGAGGA chr7:22723135-22723215 32 1.52e-04 GATGTAATGA AAAAGGGA GTAACGAAGC chr1:19229167-19229247 16 1.71e-04 AGCTTCGGCT AATAAAAA ATATTTCTAG chr1:54886914-54886994 43 2.53e-04 AAGGAGGGCA GGAATAAA GATTACCAGC chr22:18330325-18330405 43 2.64e-04 TGACCTCAGG GAGATAAA AGGGGCCGAC chr11:70314712-70314792 23 2.99e-04 AAAGTGGTCT GGAAGAAA CCATTGGAAG chr1:228665145-228665225 54 2.99e-04 AGTTTTAGAT GGAAGAAA CCACAGAGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:18315357-18315437 3.2e-06 42_[+4]_30 chr10:94003161-94003241 3.2e-06 72_[+4] chr7:104909591-104909671 3.2e-06 28_[+4]_44 chr13:76112096-76112176 7.8e-06 30_[+4]_42 chr1:154909599-154909679 1.1e-05 1_[+4]_71 chr17:55362410-55362490 1.1e-05 43_[+4]_29 chr15:63491332-63491412 1.6e-05 55_[+4]_17 chr9:97325960-97326040 2.2e-05 60_[+4]_12 chr10:130832379-13083245 2.2e-05 29_[+4]_43 chr7:100084900-100084980 2.2e-05 30_[+4]_42 chr11:74724334-74724414 3.6e-05 41_[+4]_31 chr15:71544682-71544762 4.9e-05 70_[+4]_2 chr4:13486128-13486208 4.9e-05 13_[+4]_59 chr1:147013204-147013284 4.9e-05 50_[+4]_22 chr9:98268259-98268339 4.9e-05 35_[+4]_37 chr17:41649930-41650010 4.9e-05 19_[+4]_53 chr17:36956237-36956317 5.6e-05 38_[+4]_34 chr7:103634884-103634964 7e-05 66_[+4]_6 chr12:104940489-10494056 8.4e-05 50_[+4]_22 chr19:55678297-55678377 9.8e-05 55_[+4]_17 chr8:107669914-107669994 0.0001 62_[+4]_10 chr3:12797393-12797473 0.00012 37_[+4]_35 chrX:53024987-53025067 0.00012 26_[+4]_46 chr19:50268812-50268892 0.00012 4_[+4]_68 chr13:115078836-11507891 0.00013 21_[+4]_51 chr17:7387415-7387495 0.00015 45_[+4]_27 chr7:22723135-22723215 0.00015 31_[+4]_41 chr1:19229167-19229247 0.00017 15_[+4]_57 chr1:54886914-54886994 0.00025 42_[+4]_30 chr22:18330325-18330405 0.00026 42_[+4]_30 chr11:70314712-70314792 0.0003 22_[+4]_50 chr1:228665145-228665225 0.0003 53_[+4]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAKAAA width=8 seqs=32 chr19:18315357-18315437 ( 43) AAAATAAA 1 chr10:94003161-94003241 ( 73) AAAATAAA 1 chr7:104909591-104909671 ( 29) AAAATAAA 1 chr13:76112096-76112176 ( 31) AAAAGAAA 1 chr1:154909599-154909679 ( 2) AAAAAAAA 1 chr17:55362410-55362490 ( 44) AAAAAAAA 1 chr15:63491332-63491412 ( 56) AAAATGAA 1 chr9:97325960-97326040 ( 61) AAAAGGAA 1 chr10:130832379-13083245 ( 30) AAAAGGAA 1 chr7:100084900-100084980 ( 31) AAAAGGAA 1 chr11:74724334-74724414 ( 42) AAGATAAA 1 chr15:71544682-71544762 ( 71) AAAAGAGA 1 chr4:13486128-13486208 ( 14) AGAAGAAA 1 chr1:147013204-147013284 ( 51) AGAAGAAA 1 chr9:98268259-98268339 ( 36) AGAAGAAA 1 chr17:41649930-41650010 ( 20) AAAAGAGA 1 chr17:36956237-36956317 ( 39) AAGAGAAA 1 chr7:103634884-103634964 ( 67) AATATAAA 1 chr12:104940489-10494056 ( 51) AAAACAAA 1 chr19:55678297-55678377 ( 56) CAAATAAA 1 chr8:107669914-107669994 ( 63) AAGAAAAA 1 chr3:12797393-12797473 ( 38) CAAAGAAA 1 chrX:53024987-53025067 ( 27) AAAATGGA 1 chr19:50268812-50268892 ( 5) AAAATGGA 1 chr13:115078836-11507891 ( 22) AAGATGAA 1 chr17:7387415-7387495 ( 46) AAAAGGGA 1 chr7:22723135-22723215 ( 32) AAAAGGGA 1 chr1:19229167-19229247 ( 16) AATAAAAA 1 chr1:54886914-54886994 ( 43) GGAATAAA 1 chr22:18330325-18330405 ( 43) GAGATAAA 1 chr11:70314712-70314792 ( 23) GGAAGAAA 1 chr1:228665145-228665225 ( 54) GGAAGAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.89106 E= 4.9e+002 198 -225 -124 -1164 198 -1164 -65 -1164 193 -1164 -92 -168 228 -1164 -1164 -1164 -72 -325 67 90 181 -1164 -7 -1164 198 -1164 -65 -1164 228 -1164 -1164 -1164 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 32 E= 4.9e+002 0.812500 0.062500 0.125000 0.000000 0.812500 0.000000 0.187500 0.000000 0.781250 0.000000 0.156250 0.062500 1.000000 0.000000 0.000000 0.000000 0.125000 0.031250 0.468750 0.375000 0.718750 0.000000 0.281250 0.000000 0.812500 0.000000 0.187500 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAKAAA MEME-4 regular expression -------------------------------------------------------------------------------- AAAA[GT][AG]AA -------------------------------------------------------------------------------- Time 15.98 secs. ******************************************************************************** ******************************************************************************** MOTIF CTYCCYCT MEME-5 width = 8 sites = 17 llr = 158 E-value = 1.7e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 9:4aa5a: probability G :::::::: matrix T 1a6::5:a bits 2.3 * * 2.1 * * 1.9 * ** ** 1.6 * ** ** Relative 1.4 ** ** ** Entropy 1.2 ***** ** (13.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTCCCCT consensus C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:180472145-180472225 59 1.29e-05 ACAGAAGCTG CTTCCTCT GGGATCCTTC chr19:50179827-50179907 30 1.29e-05 CAGCTATGCC CTTCCTCT CTCTGGGCCT chrX:53024987-53025067 53 1.29e-05 GTGGACTGTC CTTCCTCT GCGCCCCTCA chr11:69808516-69808596 7 1.29e-05 TTTGTA CTTCCTCT TCCCTTCCGT chr12:104940489-10494056 23 1.29e-05 TTTGATCTAA CTTCCTCT TTTCCCCACT chr20:814341-814421 18 3.20e-05 GGCGTGCTCA CTTCCCCT TCCACGGCGC chr15:63491332-63491412 73 3.20e-05 AAACATTTCC CTTCCCCT chr10:73479744-73479824 55 3.20e-05 TGGCGCTCAC CTTCCCCT GTCGGAAGTT chr17:55362410-55362490 63 3.20e-05 TGTTTGCATC CTTCCCCT TAGATAAGGA chr15:57511486-57511566 62 5.10e-05 AGCATAAACC CTCCCTCT GTGCTCTGTG chr7:20826520-20826600 18 5.10e-05 ACAATTGTAG CTCCCTCT CCGGCTTTGA chrX:48768435-48768515 48 7.93e-05 TCAGAATAGT CTCCCCCT TCTTCAGTGA chr16:27240619-27240699 69 7.93e-05 tgatctcggg ctccccct ccag chr11:47291586-47291666 59 7.93e-05 CGGCCCCGGC CTCCCCCT CCGCACCCCG chr19:49653080-49653160 65 7.93e-05 ATAAATCCCA CTCCCCCT TCCCAGGG chr9:130538758-130538838 40 7.93e-05 TGTGAGTTCC CTCCCCCT GCCCCCAGCT chr10:104421036-10442111 22 8.80e-05 GTGGGGGTGG TTTCCTCT GCTGCCTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:180472145-180472225 1.3e-05 58_[+5]_14 chr19:50179827-50179907 1.3e-05 29_[+5]_43 chrX:53024987-53025067 1.3e-05 52_[+5]_20 chr11:69808516-69808596 1.3e-05 6_[+5]_66 chr12:104940489-10494056 1.3e-05 22_[+5]_50 chr20:814341-814421 3.2e-05 17_[+5]_55 chr15:63491332-63491412 3.2e-05 72_[+5] chr10:73479744-73479824 3.2e-05 54_[+5]_18 chr17:55362410-55362490 3.2e-05 62_[+5]_10 chr15:57511486-57511566 5.1e-05 61_[+5]_11 chr7:20826520-20826600 5.1e-05 17_[+5]_55 chrX:48768435-48768515 7.9e-05 47_[+5]_25 chr16:27240619-27240699 7.9e-05 68_[+5]_4 chr11:47291586-47291666 7.9e-05 58_[+5]_14 chr19:49653080-49653160 7.9e-05 64_[+5]_8 chr9:130538758-130538838 7.9e-05 39_[+5]_33 chr10:104421036-10442111 8.8e-05 21_[+5]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTYCCYCT width=8 seqs=17 chr5:180472145-180472225 ( 59) CTTCCTCT 1 chr19:50179827-50179907 ( 30) CTTCCTCT 1 chrX:53024987-53025067 ( 53) CTTCCTCT 1 chr11:69808516-69808596 ( 7) CTTCCTCT 1 chr12:104940489-10494056 ( 23) CTTCCTCT 1 chr20:814341-814421 ( 18) CTTCCCCT 1 chr15:63491332-63491412 ( 73) CTTCCCCT 1 chr10:73479744-73479824 ( 55) CTTCCCCT 1 chr17:55362410-55362490 ( 63) CTTCCCCT 1 chr15:57511486-57511566 ( 62) CTCCCTCT 1 chr7:20826520-20826600 ( 18) CTCCCTCT 1 chrX:48768435-48768515 ( 48) CTCCCCCT 1 chr16:27240619-27240699 ( 69) CTCCCCCT 1 chr11:47291586-47291666 ( 59) CTCCCCCT 1 chr19:49653080-49653160 ( 65) CTCCCCCT 1 chr9:130538758-130538838 ( 40) CTCCCCCT 1 chr10:104421036-10442111 ( 22) TTTCCTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1364 E= 1.7e+003 -1073 166 -1073 -177 -1073 -1073 -1073 231 -1073 46 -1073 155 -1073 174 -1073 -1073 -1073 174 -1073 -1073 -1073 83 -1073 123 -1073 174 -1073 -1073 -1073 -1073 -1073 231 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 17 E= 1.7e+003 0.000000 0.941176 0.000000 0.058824 0.000000 0.000000 0.000000 1.000000 0.000000 0.411765 0.000000 0.588235 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.529412 0.000000 0.470588 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCCYCT MEME-5 regular expression -------------------------------------------------------------------------------- CT[TC]CC[CT]CT -------------------------------------------------------------------------------- Time 19.55 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:63557658-63557738 2.35e-01 80 chr8:37553213-37553293 2.03e-02 30_[+1(1.52e-05)]_42 chr13:114520089-11452016 1.36e-01 80 chr5:133450364-133450444 2.08e-02 23_[+1(3.00e-05)]_49 chr17:47308179-47308259 2.12e-01 80 chr4:109094494-109094574 2.26e-03 29_[+1(1.52e-05)]_43 chr9:130538758-130538838 8.87e-02 39_[+5(7.93e-05)]_33 chr19:56103086-56103166 2.72e-01 80 chr17:26124961-26125041 5.36e-02 24_[+1(5.25e-05)]_48 chr19:49649544-49649624 6.46e-01 80 chr17:7743442-7743522 6.49e-01 80 chr19:49653080-49653160 4.66e-02 64_[+5(7.93e-05)]_8 chr19:52552589-52552669 8.45e-01 80 chr21:35211780-35211860 9.60e-01 80 chr5:71528302-71528382 3.26e-02 35_[+1(5.25e-05)]_37 chr7:20826520-20826600 6.59e-04 17_[+5(5.10e-05)]_4_[+1(1.52e-05)]_\ 43 chr18:11987820-11987900 3.00e-01 80 chr1:16488989-16489069 2.59e-04 26_[+1(3.00e-05)]_6_[+2(2.57e-05)]_\ 32 chr11:66034858-66034938 1.64e-01 80 chr10:120183449-12018352 1.94e-02 23_[+1(1.52e-05)]_49 chr17:65990716-65990796 4.86e-03 66_[+3(9.65e-06)]_6 chr14:21944669-21944749 5.86e-01 80 chr19:50268812-50268892 1.09e-01 80 chr16:4511432-4511512 7.25e-02 37_[+2(3.85e-05)]_27_[+2(3.85e-05)] chr7:100084900-100084980 1.39e-02 30_[+4(2.22e-05)]_42 chr16:29678110-29678190 2.62e-02 69_[+2(6.85e-05)]_3 chr22:38859491-38859571 6.47e-01 80 chr9:115818989-115819069 9.54e-01 80 chr8:38644592-38644672 1.90e-01 39_[+1(5.25e-05)]_33 chr9:126817206-126817286 8.77e-03 56_[+3(3.05e-05)]_16 chr14:52118270-52118350 8.64e-01 80 chr4:3838517-3838597 3.36e-03 30_[+3(4.43e-05)]_42 chrX:48754567-48754647 7.32e-01 80 chr2:217277418-217277498 3.05e-01 80 chr11:62475056-62475136 4.19e-02 62_[+2(6.85e-05)]_10 chr17:41649930-41650010 3.92e-02 19_[+4(4.91e-05)]_53 chr12:71834714-71834794 4.42e-03 42_[+1(1.52e-05)]_30 chr3:71191709-71191789 4.93e-01 80 chr16:50501991-50502071 2.94e-02 20_[+1(1.52e-05)]_52 chr11:47291586-47291666 1.60e-01 58_[+5(7.93e-05)]_14 chr8:17013368-17013448 5.80e-01 80 chr6:90813314-90813394 1.35e-03 47_[+3(3.91e-06)]_25 chr10:101380326-10138040 1.06e-04 55_[+1(8.34e-05)]_2_[+3(8.68e-05)]_\ 7 chr2:171571722-171571802 3.48e-04 15_[+1(3.00e-05)]_16_[+1(5.25e-05)]_\ 33 chr19:52511480-52511560 6.66e-01 80 chr19:46032103-46032183 2.43e-01 80 chr22:37415605-37415685 9.99e-01 80 chr17:55362410-55362490 1.18e-06 18_[+1(8.34e-05)]_17_[+4(1.11e-05)]_\ 11_[+5(3.20e-05)]_10 chr1:1935263-1935343 4.80e-01 80 chrX:47180872-47180952 5.64e-02 80 chr3:133292704-133292784 1.00e+00 80 chr17:36955733-36955813 7.91e-01 80 chr22:18330325-18330405 4.06e-01 80 chr3:72201887-72201967 7.79e-01 80 chr5:89854409-89854489 9.92e-01 80 chr5:39218009-39218089 2.95e-03 17_[+1(5.25e-05)]_55 chr9:98268259-98268339 5.26e-04 1_[+3(3.45e-05)]_26_[+4(4.91e-05)]_\ 37 chr7:151329446-151329526 6.93e-03 40_[+2(1.29e-05)]_32 chr12:104940489-10494056 1.47e-05 22_[+5(1.29e-05)]_20_[+4(8.39e-05)]_\ 22 chr14:75348517-75348597 4.87e-01 80 chr1:23037118-23037198 9.78e-01 80 chr11:69808516-69808596 5.59e-02 6_[+5(1.29e-05)]_66 chrX:152419873-152419953 1.76e-04 20_[+3(9.65e-06)]_52 chr12:56224467-56224547 7.81e-01 80 chr7:104909591-104909671 1.42e-02 28_[+4(3.16e-06)]_44 chr5:167756051-167756131 8.62e-03 34_[+5(7.93e-05)]_38 chr2:175199620-175199700 1.59e-01 30_[+1(5.25e-05)]_42 chrX:47225767-47225847 5.97e-01 80 chr6:43845672-43845752 2.55e-01 80 chr1:228665145-228665225 6.52e-02 80 chr22:36725466-36725546 2.39e-02 80 chr19:7717067-7717147 2.78e-02 80 chr10:73479744-73479824 7.64e-03 54_[+5(3.20e-05)]_18 chr14:100070680-10007076 8.59e-01 80 chr1:147071663-147071743 4.89e-01 80 chr12:42632157-42632237 5.01e-01 80 chr4:153273982-153274062 1.09e-01 80 chrX:47880870-47880950 3.10e-02 64_[+2(3.85e-05)]_8 chr7:99104122-99104202 8.53e-02 80 chr8:61149551-61149631 3.54e-02 10_[+1(5.25e-05)]_62 chr10:75910595-75910675 4.85e-02 35_[+1(5.25e-05)]_37 chr11:568704-568784 5.85e-01 80 chr15:63491332-63491412 2.84e-04 55_[+4(1.56e-05)]_9_[+5(3.20e-05)] chrX:47420780-47420860 8.04e-01 80 chr17:55938533-55938613 5.68e-03 30_[+1(1.52e-05)]_42 chr17:72414974-72415054 4.23e-03 33_[+1(3.00e-05)]_39 chr10:135129957-13513003 2.76e-01 80 chrX:47050117-47050197 6.19e-01 80 chr15:57511486-57511566 3.98e-03 61_[+5(5.10e-05)]_11 chr19:49141639-49141719 9.09e-01 80 chr3:48700320-48700400 3.60e-01 80 chr6:83073342-83073422 6.96e-02 80 chrX:43514010-43514090 7.58e-01 80 chr1:54886914-54886994 8.36e-02 80 chr18:499645-499725 4.38e-02 11_[+1(3.00e-05)]_61 chrX:49022874-49022954 4.39e-01 80 chrX:153686491-153686571 8.31e-01 80 chr7:103634884-103634964 1.78e-01 66_[+4(7.00e-05)]_6 chr12:89936886-89936966 3.51e-01 80 chr20:524572-524652 1.11e-03 71_[+3(1.24e-05)]_1 chr10:77054719-77054799 2.00e-01 27_[+1(5.25e-05)]_45 chr5:150326149-150326229 4.95e-01 80 chr11:125933051-12593313 8.05e-02 80 chr2:198380194-198380274 3.84e-03 35_[+1(1.52e-05)]_37 chr10:94003161-94003241 3.85e-03 57_[+4(6.03e-05)]_7_[+4(3.16e-06)] chr1:6550665-6550745 9.87e-01 80 chr3:25469878-25469958 6.31e-02 80 chr1:15944518-15944598 9.71e-01 80 chr19:37663727-37663807 1.43e-01 80 chr20:40322145-40322225 2.91e-01 80 chr19:49653628-49653708 8.93e-01 80 chr2:66660693-66660773 5.05e-01 80 chr9:130150803-130150883 1.83e-02 17_[+1(6.78e-05)]_55 chr16:27240619-27240699 1.09e-02 68_[+5(7.93e-05)]_4 chr1:110361068-110361148 6.75e-01 80 chrX:48768435-48768515 1.88e-02 47_[+5(7.93e-05)]_25 chr15:65117970-65118050 5.97e-01 80 chr12:125093761-12509384 2.31e-02 41_[+1(5.25e-05)]_31 chr3:195538805-195538885 5.15e-02 80 chrX:48755416-48755496 1.00e-02 19_[+3(9.65e-06)]_53 chr19:52408293-52408373 2.14e-02 63_[+2(2.57e-05)]_9 chr8:107669914-107669994 5.85e-03 80 chr19:41312788-41312868 4.72e-02 80 chr7:22723135-22723215 2.46e-01 80 chr7:43909090-43909170 9.81e-01 80 chrX:54835353-54835433 5.79e-02 80 chr10:17257115-17257195 4.04e-01 80 chr16:50582204-50582284 7.22e-02 18_[+1(3.00e-05)]_54 chr15:40675035-40675115 8.82e-01 80 chr19:11877809-11877889 7.66e-01 80 chr14:39901503-39901583 9.98e-01 80 chr19:42806774-42806854 7.94e-01 80 chr7:110714984-110715064 4.49e-01 80 chr19:41104187-41104267 9.66e-01 80 chr22:39052509-39052589 4.83e-02 80 chr19:37701557-37701637 6.22e-03 71_[+1(3.00e-05)]_1 chr11:62477054-62477134 4.76e-01 80 chr19:52490153-52490233 8.28e-01 80 chr16:55657107-55657187 4.25e-02 80 chr11:64433041-64433121 9.85e-02 80 chr9:35489954-35490034 1.00e+00 80 chr19:11849744-11849824 5.72e-02 40_[+1(6.78e-05)]_32 chr11:72525238-72525318 9.19e-01 80 chr1:1624582-1624662 4.28e-01 80 chr1:147013204-147013284 8.71e-02 50_[+4(4.91e-05)]_22 chr9:71788902-71788982 4.12e-01 80 chr19:50354324-50354404 3.26e-02 25_[+2(1.29e-05)]_26_[+2(1.29e-05)]_\ 13 chr4:13486128-13486208 2.86e-02 13_[+4(4.91e-05)]_59 chr1:27888724-27888804 7.06e-01 80 chr3:194406516-194406596 1.06e-01 80 chrX:153236514-153236594 1.80e-01 80 chr19:6737338-6737418 9.93e-01 80 chr22:20903624-20903704 1.93e-01 80 chr15:76067737-76067817 1.74e-02 80 chr8:107282306-107282386 3.71e-02 61_[+2(2.57e-05)]_11 chr1:150488013-150488093 9.46e-01 80 chr10:130832379-13083245 3.77e-02 29_[+4(2.22e-05)]_43 chr12:106696380-10669646 4.44e-01 80 chr17:36956237-36956317 6.91e-02 38_[+4(5.58e-05)]_34 chr2:217082258-217082338 2.24e-02 28_[+3(1.24e-05)]_44 chr2:131863878-131863958 8.44e-03 80 chrX:47342057-47342137 4.93e-02 80 chr9:6757188-6757268 7.75e-01 80 chr1:43609312-43609392 8.14e-01 80 chr20:32581499-32581579 3.80e-01 80 chr10:64028449-64028529 9.99e-01 80 chr11:82612591-82612671 3.96e-01 80 chr7:135335794-135335874 4.19e-02 80 chr1:36621683-36621763 4.66e-02 27_[+2(1.29e-05)]_45 chr8:41435921-41436001 9.06e-01 80 chr20:814341-814421 1.75e-01 17_[+5(3.20e-05)]_55 chr9:97325960-97326040 1.00e-02 32_[+1(8.34e-05)]_20_[+4(2.22e-05)]_\ 12 chr11:70314712-70314792 3.14e-02 80 chr20:2295893-2295973 3.31e-02 59_[+1(1.52e-05)]_13 chrX:48596002-48596082 6.54e-02 80 chrX:53024987-53025067 1.59e-03 52_[+5(1.29e-05)]_20 chr9:34637812-34637892 9.83e-02 80 chr5:173345070-173345150 6.50e-03 80 chr14:57046406-57046486 5.77e-01 80 chr19:50179827-50179907 1.80e-02 29_[+5(1.29e-05)]_43 chr15:48624195-48624275 7.64e-02 80 chr12:1703949-1704029 8.09e-01 80 chr5:180472145-180472225 2.57e-02 58_[+5(1.29e-05)]_14 chr6:18269563-18269643 1.56e-03 22_[+3(3.05e-05)]_50 chrX:47479310-47479390 9.69e-01 80 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requested number of motifs (5) found. ******************************************************************************** CPU: c22n09.farnam.hpc.yale.internal ********************************************************************************