******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SUZ12.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:49310036-49310116 1.0000 80 chr19:49416530-49416610 1.0000 80 chr19:49362001-49362081 1.0000 80 chr19:55831281-55831361 1.0000 80 chr19:54480860-54480940 1.0000 80 chr19:54396434-54396514 1.0000 80 chr19:54682359-54682439 1.0000 80 chr19:49385141-49385221 1.0000 80 chr19:54411490-54411570 1.0000 80 chr19:55709047-55709127 1.0000 80 chr19:49486856-49486936 1.0000 80 chr1:10706555-10706635 1.0000 80 chr19:49228254-49228334 1.0000 80 chr19:51142556-51142636 1.0000 80 chr17:7118412-7118492 1.0000 80 chr19:49013931-49014011 1.0000 80 chr19:49248608-49248688 1.0000 80 chr19:46027168-46027248 1.0000 80 chr19:55816992-55817072 1.0000 80 chr19:55815805-55815885 1.0000 80 chr19:55690506-55690586 1.0000 80 chr19:49017220-49017300 1.0000 80 chr19:50651545-50651625 1.0000 80 chr6:52929627-52929707 1.0000 80 chr19:507891-507971 1.0000 80 chr5:178157709-178157789 1.0000 80 chr19:48922670-48922750 1.0000 80 chr11:46134683-46134763 1.0000 80 chr6:31866312-31866392 1.0000 80 chr19:54382695-54382775 1.0000 80 chr2:39005285-39005365 1.0000 80 chr19:49148181-49148261 1.0000 80 chr6:44101522-44101602 1.0000 80 chr2:23598481-23598561 1.0000 80 chr8:124054102-124054182 1.0000 80 chr2:27319252-27319332 1.0000 80 chr6:10147340-10147420 1.0000 80 chr2:86332685-86332765 1.0000 80 chr9:72435537-72435617 1.0000 80 chr19:55677451-55677531 1.0000 80 chr16:68482608-68482688 1.0000 80 chr17:40559666-40559746 1.0000 80 chr19:49250489-49250569 1.0000 80 chr2:136288406-136288486 1.0000 80 chr17:7358816-7358896 1.0000 80 chr1:147142659-147142739 1.0000 80 chr19:49422142-49422222 1.0000 80 chr1:234812114-234812194 1.0000 80 chr3:69788455-69788535 1.0000 80 chr14:36295379-36295459 1.0000 80 chr19:49224354-49224434 1.0000 80 chr12:861513-861593 1.0000 80 chr6:157801084-157801164 1.0000 80 chr7:20257080-20257160 1.0000 80 chr11:64387388-64387468 1.0000 80 chr17:7094935-7095015 1.0000 80 chr6:43215024-43215104 1.0000 80 chr19:7616337-7616417 1.0000 80 chr2:220150936-220151016 1.0000 80 chr19:45988713-45988793 1.0000 80 chr13:52157976-52158056 1.0000 80 chr20:48732486-48732566 1.0000 80 chr12:110151321-11015140 1.0000 80 chr13:31736510-31736590 1.0000 80 chr14:82000459-82000539 1.0000 80 chr19:48907016-48907096 1.0000 80 chr11:64376987-64377067 1.0000 80 chrX:134478609-134478689 1.0000 80 chr19:41084530-41084610 1.0000 80 chr22:41840447-41840527 1.0000 80 chr19:38270225-38270305 1.0000 80 chr16:46918118-46918198 1.0000 80 chr19:44331386-44331466 1.0000 80 chr3:98241881-98241961 1.0000 80 chr1:205744611-205744691 1.0000 80 chr5:138775200-138775280 1.0000 80 chr10:38383154-38383234 1.0000 80 chr21:15755524-15755604 1.0000 80 chr1:47799895-47799975 1.0000 80 chr19:49404460-49404540 1.0000 80 chr4:104021022-104021102 1.0000 80 chr19:37861891-37861971 1.0000 80 chr12:32832085-32832165 1.0000 80 chr1:243419219-243419299 1.0000 80 chr8:82755024-82755104 1.0000 80 chr4:2538126-2538206 1.0000 80 chr19:38397761-38397841 1.0000 80 chr6:6890940-6891020 1.0000 80 chr7:150689951-150690031 1.0000 80 chr19:10828075-10828155 1.0000 80 chr14:81408128-81408208 1.0000 80 chr19:48866436-48866516 1.0000 80 chr5:55008192-55008272 1.0000 80 chrX:149736803-149736883 1.0000 80 chr4:7075460-7075540 1.0000 80 chr11:65635650-65635730 1.0000 80 chr2:217277090-217277170 1.0000 80 chr12:104323514-10432359 1.0000 80 chr9:133003022-133003102 1.0000 80 chr18:9913576-9913656 1.0000 80 chr1:243418777-243418857 1.0000 80 chr19:19887272-19887352 1.0000 80 chr19:41571019-41571099 1.0000 80 chr19:50836841-50836921 1.0000 80 chr10:124134024-12413410 1.0000 80 chr6:15245639-15245719 1.0000 80 chr19:57946562-57946642 1.0000 80 chr1:154979443-154979523 1.0000 80 chr3:61235784-61235864 1.0000 80 chr10:43048346-43048426 1.0000 80 chr4:18023791-18023871 1.0000 80 chr12:56710136-56710216 1.0000 80 chr11:134123326-13412340 1.0000 80 chr16:30908469-30908549 1.0000 80 chr15:40986886-40986966 1.0000 80 chr16:31045641-31045721 1.0000 80 chr13:30881224-30881304 1.0000 80 chr9:15422705-15422785 1.0000 80 chr16:31106263-31106343 1.0000 80 chr1:31327123-31327203 1.0000 80 chr19:50163158-50163238 1.0000 80 chr5:74807658-74807738 1.0000 80 chr16:29687603-29687683 1.0000 80 chr19:49479588-49479668 1.0000 80 chr19:44809204-44809284 1.0000 80 chr16:30939332-30939412 1.0000 80 chr17:7123126-7123206 1.0000 80 chr19:49947068-49947148 1.0000 80 chr2:202316287-202316367 1.0000 80 chr9:101172675-101172755 1.0000 80 chr17:7591570-7591650 1.0000 80 chr4:174291898-174291978 1.0000 80 chr4:8160676-8160756 1.0000 80 chr13:41837968-41838048 1.0000 80 chr15:41099707-41099787 1.0000 80 chr14:59655260-59655340 1.0000 80 chr16:1625721-1625801 1.0000 80 chr18:56806971-56807051 1.0000 80 chr11:66138873-66138953 1.0000 80 chr1:224544447-224544527 1.0000 80 chr1:22755259-22755339 1.0000 80 chr11:114310072-11431015 1.0000 80 chr15:75182318-75182398 1.0000 80 chrX:70315604-70315684 1.0000 80 chr13:41768698-41768778 1.0000 80 chr10:104262586-10426266 1.0000 80 chr6:110501298-110501378 1.0000 80 chr2:54950547-54950627 1.0000 80 chr19:42463547-42463627 1.0000 80 chr9:133783690-133783770 1.0000 80 chr10:103892652-10389273 1.0000 80 chr19:49469192-49469272 1.0000 80 chr1:20767408-20767488 1.0000 80 chr12:88535977-88536057 1.0000 80 chr1:247095509-247095589 1.0000 80 chr19:4066018-4066098 1.0000 80 chr19:55708324-55708404 1.0000 80 chr2:239143008-239143088 1.0000 80 chr1:154842891-154842971 1.0000 80 chr16:33569517-33569597 1.0000 80 chr11:74109857-74109937 1.0000 80 chr3:127771058-127771138 1.0000 80 chr20:21077058-21077138 1.0000 80 chrX:106045780-106045860 1.0000 80 chr9:97021491-97021571 1.0000 80 chr11:66035898-66035978 1.0000 80 chr11:113644471-11364455 1.0000 80 chr11:450201-450281 1.0000 80 chr19:42772884-42772964 1.0000 80 chr19:50030971-50031051 1.0000 80 chr19:51152951-51153031 1.0000 80 chr20:49084695-49084775 1.0000 80 chr17:19912574-19912654 1.0000 80 chr11:73661985-73662065 1.0000 80 chr2:2617281-2617361 1.0000 80 chr6:14800257-14800337 1.0000 80 chr19:49223924-49224004 1.0000 80 chr16:19535062-19535142 1.0000 80 chr3:50397077-50397157 1.0000 80 chr10:111985582-11198566 1.0000 80 chr4:79575018-79575098 1.0000 80 chr10:44144326-44144406 1.0000 80 chr16:58426721-58426801 1.0000 80 chr10:102673111-10267319 1.0000 80 chr16:30103260-30103340 1.0000 80 chr4:6374774-6374854 1.0000 80 chr22:33300158-33300238 1.0000 80 chr10:72288710-72288790 1.0000 80 chr16:4817226-4817306 1.0000 80 chr1:155990743-155990823 1.0000 80 chr7:100888046-100888126 1.0000 80 chr19:4304529-4304609 1.0000 80 chr19:48848303-48848383 1.0000 80 chr9:37920544-37920624 1.0000 80 chr12:124594395-12459447 1.0000 80 chr18:71815675-71815755 1.0000 80 chr8:30891092-30891172 1.0000 80 chr17:7760558-7760638 1.0000 80 chr11:36355674-36355754 1.0000 80 chr5:178286893-178286973 1.0000 80 chr20:47805032-47805112 1.0000 80 chr19:52097750-52097830 1.0000 80 chr17:38443829-38443909 1.0000 80 chr16:15150015-15150095 1.0000 80 chr10:92631672-92631752 1.0000 80 chr19:37569247-37569327 1.0000 80 chr9:99616821-99616901 1.0000 80 chr16:58664402-58664482 1.0000 80 chr9:132031093-132031173 1.0000 80 chr6:41703386-41703466 1.0000 80 chr19:58838292-58838372 1.0000 80 chr13:26827954-26828034 1.0000 80 chr11:125773086-12577316 1.0000 80 chr19:36208412-36208492 1.0000 80 chr1:151584366-151584446 1.0000 80 chr10:71754207-71754287 1.0000 80 chr2:38893003-38893083 1.0000 80 chr3:14361216-14361296 1.0000 80 chr17:16439095-16439175 1.0000 80 chr3:50388506-50388586 1.0000 80 chr18:60382257-60382337 1.0000 80 chr12:133532881-13353296 1.0000 80 chr1:244816066-244816146 1.0000 80 chr20:62289892-62289972 1.0000 80 chr19:44488241-44488321 1.0000 80 chr19:37178350-37178430 1.0000 80 chr2:18741926-18742006 1.0000 80 chr8:103763436-103763516 1.0000 80 chr20:62694376-62694456 1.0000 80 chr18:32923948-32924028 1.0000 80 chr19:38720430-38720510 1.0000 80 chrX:106362050-106362130 1.0000 80 chr14:73493984-73494064 1.0000 80 chr18:77439402-77439482 1.0000 80 chr10:103113630-10311371 1.0000 80 chr22:30163037-30163117 1.0000 80 chr17:77005881-77005961 1.0000 80 chr22:22020238-22020318 1.0000 80 chr19:5790610-5790690 1.0000 80 chr3:13933305-13933385 1.0000 80 chr19:40697275-40697355 1.0000 80 chr12:96429425-96429505 1.0000 80 chr20:25677511-25677591 1.0000 80 chr9:132346481-132346561 1.0000 80 chr17:46178868-46178948 1.0000 80 chr14:77924022-77924102 1.0000 80 chr19:44598408-44598488 1.0000 80 chr1:156308545-156308625 1.0000 80 chr6:5003901-5003981 1.0000 80 chr2:241525730-241525810 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SUZ12/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SUZ12.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.202 C 0.295 G 0.306 T 0.198 Background letter frequencies (from file dataset with add-one prior applied): A 0.202 C 0.295 G 0.306 T 0.198 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACTACAWY MEME-1 width = 8 sites = 124 llr = 1085 E-value = 3.7e-145 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 Description -------------------------------------------------------------------------------- Simplified A a::9:96: pos.-specific C :a::a:14 probability G :::::111 matrix T ::a:::35 bits 2.3 * 2.1 * * 1.9 **** 1.6 ****** Relative 1.4 ****** Entropy 1.2 ****** (12.6 bits) 0.9 ****** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ACTACAAT consensus TC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:50388506-50388586 3 5.68e-06 GA ACTACAAT TTCCATAGTG chr19:58838292-58838372 5 5.68e-06 GTCA ACTACAAT TCCCAGCAGG chr2:2617281-2617361 40 5.68e-06 GCAAGCGTaa actacaat ccccaggatg chr13:30881224-30881304 49 5.68e-06 GAGTCGCTGA ACTACAAT TCCCATGATG chrX:149736803-149736883 24 5.68e-06 CATATTGCGA ACTACAAT TCCCAGCTGC chr8:82755024-82755104 3 5.68e-06 AG ACTACAAT TCCCAGAAGG chr14:82000459-82000539 11 5.68e-06 CTCATCCGAG ACTACAAT TCCCAGAATG chr19:49248608-49248688 3 5.68e-06 AA ACTACAAT ACCCATGAGG chr19:51142556-51142636 3 5.68e-06 AG ACTACAAT TCCCGGCAGG chr19:54682359-54682439 3 5.68e-06 aa actacaat tcccatgAGC chr19:49362001-49362081 9 5.68e-06 CATTATGG ACTACAAT ACCCATGACA chr6:5003901-5003981 66 1.97e-05 CAGTTAAGAG ACTACAAC TCCCAGC chr9:132346481-132346561 14 1.97e-05 ctggcccaaa actacatt tcccagcatc chr19:40697275-40697355 17 1.97e-05 ACGGCCGGAG ACTACAAC TCCCAGGAGG chr14:73493984-73494064 6 1.97e-05 GAATG ACTACAAC TCCCAGTACT chr8:103763436-103763516 14 1.97e-05 ccagctaaag actacatt tcccagcctc chr12:133532881-13353296 7 1.97e-05 CGCAGA ACTACATT TCCCAGCGTC chr3:14361216-14361296 33 1.97e-05 actcagctgg actacatt tcccaggctc chr9:132031093-132031173 5 1.97e-05 ctag actacatt tcccagcctc chr9:99616821-99616901 48 1.97e-05 CTCATTCAGG ACTACATT TCCCATAAGC chr19:37569247-37569327 32 1.97e-05 GGAGCGCTGG ACTACATT TCCCAGAGGC chr12:124594395-12459447 17 1.97e-05 agctagtgaa actacatt tcccaggctc chr9:37920544-37920624 8 1.97e-05 gccaggg actacatt tcccagcctc chr19:48848303-48848383 24 1.97e-05 CAGGCTCAGG ACTACAAC TCCCAGCAGC chr19:4304529-4304609 29 1.97e-05 CCAGCGCGGA ACTACATT TCCCAGGCGG chr7:100888046-100888126 1 1.97e-05 . ACTACAAC TCCCAGGAGC chr22:33300158-33300238 19 1.97e-05 ccccatctgg actacatt tcccagcagg chr4:6374774-6374854 24 1.97e-05 ctacatgtgg actacatt tcccagcagc chr19:49223924-49224004 37 1.97e-05 CGGGATAAGA ACTACAAC TCCCAGAAAG chr6:14800257-14800337 20 1.97e-05 tcagatgaag actacatt tcccaggctc chr11:73661985-73662065 17 1.97e-05 GGGAAGTGGG ACTACAAC TCCCAGAGTG chr20:49084695-49084775 10 1.97e-05 gcagtaaag actacatt tcccagcctc chr19:51152951-51153031 43 1.97e-05 TGGACTCAGA ACTACATT TCCCATGAGC chr11:113644471-11364455 60 1.97e-05 CGAGGGGCGC ACTACAAC TCCCAGCAGG chrX:106045780-106045860 53 1.97e-05 CGCGTAGGAA ACTACAAC TCCCAAGAGG chr19:55708324-55708404 4 1.97e-05 TAA ACTACAAC TCCCATGAGG chr15:75182318-75182398 8 1.97e-05 TCAGGGA ACTACATT TCCCGTGAAG chr1:22755259-22755339 19 1.97e-05 gggtataaag actacatt tcccagcata chr1:224544447-224544527 46 1.97e-05 TAAAATATGG ACTACAAC TCCCGGCATG chr11:66138873-66138953 10 1.97e-05 CCGGAGCGG ACTACAAC CCCGATCACC chr13:41837968-41838048 11 1.97e-05 GTGGGACTAA ACTACAAC TCCCAGAGCG chr17:7591570-7591650 28 1.97e-05 AAGCGTTCAG ACTACAAC TCCCAGCAGC chr9:101172675-101172755 17 1.97e-05 aagccctgaa actacatt tcccagaatc chr19:50163158-50163238 10 1.97e-05 GCTTGGAGG ACTACAAC TCCCTGCAGC chr16:30908469-30908549 5 1.97e-05 CAGG ACTACATT CCCCAGCACG chr11:134123326-13412340 51 1.97e-05 TCGTGGGAGG ACTACAAC CCCCAGGGTG chr10:43048346-43048426 62 1.97e-05 GAAAGTGAAG ACTACATT TCCCAGAAGT chr1:154979443-154979523 8 1.97e-05 AAGGGGG ACTACAAC TCCCAAGGTA chr19:57946562-57946642 34 1.97e-05 CAACGTGAGA ACTACATT ACCCAGAAGA chr19:19887272-19887352 45 1.97e-05 CAGTAAAGAG ACTACAAC TCCCAGCATA chr9:133003022-133003102 4 1.97e-05 agg actacatt tcccagcctc chr5:55008192-55008272 50 1.97e-05 GCCGCTACGG ACTACAAC TCCCAGAGGG chr1:243419219-243419299 57 1.97e-05 GAACGTGAGG ACTACAAC TCCCGACGTG chr12:32832085-32832165 6 1.97e-05 CCAGA ACTACAAC TCCCAGCAGG chr19:49404460-49404540 9 1.97e-05 CAAACAAA ACTACATT TCCCAGTAGC chr5:138775200-138775280 59 1.97e-05 GGGGCACTGG ACTACAAC TCCCGGCAGG chr19:44331386-44331466 25 1.97e-05 GCCGCTGTGG ACTACATT TCCCAGAAGT chr12:861513-861593 10 1.97e-05 CCAAAGAAA ACTACAAC TCCCACGAGG chr14:36295379-36295459 52 1.97e-05 AGACCTACGA ACTACAAC TCCCGGCAAG chr19:49422142-49422222 3 1.97e-05 AA ACTACAAC TCCCATCAGC chr1:147142659-147142739 59 1.97e-05 AGCTGCGGAA ACTACAAC TCCCACAAGG chr19:49250489-49250569 1 1.97e-05 . ACTACAAC TCCCAAAATG chr19:49148181-49148261 3 1.97e-05 GA ACTACAAC TCCCAGCAGG chr19:48922670-48922750 4 1.97e-05 AGA ACTACATT TCCCAGCAGC chr19:49013931-49014011 4 1.97e-05 TGG ACTACAAC TCCCGTGATG chr19:54480860-54480940 4 1.97e-05 GAG ACTACAAC TCCCATGATC chr3:13933305-13933385 23 2.80e-05 GACTTtagaa actacatc tcccagcatc chr17:19912574-19912654 9 2.80e-05 GTCCGGGT ACTACATC TCCCAGCGAG chr2:239143008-239143088 14 2.80e-05 AGGGGTCGGA ACTACATC TCCCAGGAGG chr19:49469192-49469272 4 2.80e-05 TGG ACTACATC TCCCAGCAGG chr12:56710136-56710216 2 2.80e-05 A ACTACATC TCCCAGGAAG chr20:62694376-62694456 16 3.63e-05 GTGGGTCAGG ACTACACT TCCCAGGAGG chr5:178286893-178286973 5 3.63e-05 TGGA ACTACACT TCCCAGAAAG chr8:30891092-30891172 27 3.63e-05 CTGCGAAGAG ACTACACT TCCCGAGGTG chr2:54950547-54950627 51 3.63e-05 CGCAGAGAGG ACTACACT TCCCAGGATG chr6:110501298-110501378 10 3.63e-05 TCGTTGCAA ACTACACT TCCCATTGTG chr17:46178868-46178948 31 4.51e-05 TCTGTCCAAG ACTACAAG GCCCGAAGCG chr12:96429425-96429505 49 4.51e-05 GGGTGAAGGA ACTACAAG TTCCATGGTG chr3:50397077-50397157 3 4.51e-05 GA ACTACAAG TCCCAGGAGG chr11:450201-450281 66 4.51e-05 CCCCGCGCGG ACTACAAG CCCCACA chr4:8160676-8160756 41 4.51e-05 GGGCGATCGG ACTACAAG TCCCAGCACG chr19:45988713-45988793 2 4.51e-05 A ACTACAAG TCCCAGCAGG chr19:55816992-55817072 3 4.51e-05 GA ACTACAAG TCCCAGCAGC chr10:111985582-11198566 49 5.37e-05 CGGCGTGTGC ACTACGAT TCCCGGCAGC chr18:56806971-56807051 68 5.37e-05 GACTGGCGAG ACTACGAT TCCCA chr7:20257080-20257160 51 5.37e-05 AGGCAAGAGA ACTACGAT ACCCACAATT chr19:44809204-44809284 49 6.23e-05 TCACTCCTGG ACTACAGT TCCCAGAATG chr1:243418777-243418857 11 6.23e-05 ACCAACAAGG ACTACAGT TCCCAGCGGG chr17:7358816-7358896 1 6.23e-05 . ACTACAGT TCCCAGAAGA chr19:55709047-55709127 4 6.23e-05 GAA ACTACAGT TCCCATGAGG chr17:40559666-40559746 19 7.47e-05 CTGTTACCCA ACTACACC TCCCAGCAGG chr6:10147340-10147420 39 7.47e-05 ctttgcaagg actacacc tcccaggatg chr18:32923948-32924028 5 8.91e-05 TGAG ACTACAAA TCCCAGAAGC chr2:39005285-39005365 2 8.91e-05 G ACTACAAA ACAGAGGTTT chr6:52929627-52929707 3 8.91e-05 CG ACTACAAA TCCCAGAGTG chr16:19535062-19535142 9 1.10e-04 CAAGGAAG ACTACGTT TCCCGGCGTG chr11:74109857-74109937 57 1.10e-04 CGCCGCCGAG ACTACGAC TCCCAGCAGC chr12:104323514-10432359 22 1.10e-04 GAGACCAAAG ACTACGAC CCCCAGCATT chr13:52157976-52158056 11 1.10e-04 GCTCCAAGAA ACTACGAC TCCCAGGAGG chr14:77924022-77924102 36 1.32e-04 AGGCTTCTTG ACTACAGC CCCCAGAAAC chr22:22020238-22020318 7 1.32e-04 TAGCGA ACCACAAT TCCCAGCACG chr10:72288710-72288790 25 1.32e-04 aaatcatgtg accacaat gagttgcaag chr17:7123126-7123206 25 1.32e-04 GCTCCAGGGA ACTACAGC TCCCAGCATG chr11:46134683-46134763 50 1.40e-04 TTAAGCAAAA ACTGCAAT GCATACTGGG chr17:7094935-7095015 7 1.67e-04 ATTCGG ACTCCAAT TCCCAACAGC chr19:5790610-5790690 39 1.88e-04 AGTCTAAGCC ACCACATT TCCCAGCACG chr18:60382257-60382337 73 1.88e-04 CCTTACGAGA ACCACAAC chr17:16439095-16439175 18 1.88e-04 GAGGCTGTGG ACCACATT TCCCAAGAAC chr17:7118412-7118492 1 1.88e-04 . ACCACAAC TCCCAACAGC chr19:36208412-36208492 9 2.09e-04 AGCCGCGA ACTGCATT TCCCAGGGCC chr16:68482608-68482688 70 2.09e-04 ACAGAGCGGG ACTGCATT TCC chr9:72435537-72435617 53 2.09e-04 CGCTACCCTC ACTGCATT CTGGGAAATG chr19:38720430-38720510 43 2.26e-04 cccTGCCCGG ACTACACG TCCCAGGGGG chr18:71815675-71815755 52 2.52e-04 AGGTTTTCAA ACTACTAT TCCCAGGAAG chr19:55690506-55690586 2 2.52e-04 A ACTCCAAC TCCCATGAGG chr20:25677511-25677591 22 2.89e-04 CGCGGCCGGG ACTACGCT ACCCAGCATC chr1:247095509-247095589 2 3.12e-04 G ACTACGAG TCCCACAGTG chr11:64376987-64377067 33 3.12e-04 AAAGGTGAGA ACTATAAC TCCCATCAGT chr2:38893003-38893083 19 3.33e-04 CCTCCCAAAA ACTACCAT TCCCAACATG chr6:43215024-43215104 1 3.68e-04 . ACTCCATC TCCCGGCGTG chr19:42772884-42772964 34 3.81e-04 ACGTGAGAAG ACTACGGT TCCCAGCAGG chr17:38443829-38443909 19 3.99e-04 GGCAGCAAAG ACTACGCC TCCCAGCGTG chr11:66035898-66035978 55 3.99e-04 GGGCTCCCCG ACTACGCC TGCGCAGCGG chr16:33569517-33569597 42 5.07e-04 gccatgcttt actgcaag gaatgctggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:50388506-50388586 5.7e-06 2_[+1]_70 chr19:58838292-58838372 5.7e-06 4_[+1]_68 chr2:2617281-2617361 5.7e-06 39_[+1]_33 chr13:30881224-30881304 5.7e-06 48_[+1]_24 chrX:149736803-149736883 5.7e-06 23_[+1]_49 chr8:82755024-82755104 5.7e-06 2_[+1]_70 chr14:82000459-82000539 5.7e-06 10_[+1]_62 chr19:49248608-49248688 5.7e-06 2_[+1]_70 chr19:51142556-51142636 5.7e-06 2_[+1]_70 chr19:54682359-54682439 5.7e-06 2_[+1]_70 chr19:49362001-49362081 5.7e-06 8_[+1]_64 chr6:5003901-5003981 2e-05 65_[+1]_7 chr9:132346481-132346561 2e-05 13_[+1]_59 chr19:40697275-40697355 2e-05 16_[+1]_56 chr14:73493984-73494064 2e-05 5_[+1]_67 chr8:103763436-103763516 2e-05 13_[+1]_59 chr12:133532881-13353296 2e-05 6_[+1]_66 chr3:14361216-14361296 2e-05 32_[+1]_40 chr9:132031093-132031173 2e-05 4_[+1]_68 chr9:99616821-99616901 2e-05 47_[+1]_25 chr19:37569247-37569327 2e-05 31_[+1]_41 chr12:124594395-12459447 2e-05 16_[+1]_56 chr9:37920544-37920624 2e-05 7_[+1]_65 chr19:48848303-48848383 2e-05 23_[+1]_49 chr19:4304529-4304609 2e-05 28_[+1]_44 chr7:100888046-100888126 2e-05 [+1]_72 chr22:33300158-33300238 2e-05 18_[+1]_54 chr4:6374774-6374854 2e-05 23_[+1]_49 chr19:49223924-49224004 2e-05 36_[+1]_36 chr6:14800257-14800337 2e-05 19_[+1]_53 chr11:73661985-73662065 2e-05 16_[+1]_56 chr20:49084695-49084775 2e-05 9_[+1]_63 chr19:51152951-51153031 2e-05 42_[+1]_30 chr11:113644471-11364455 2e-05 59_[+1]_13 chrX:106045780-106045860 2e-05 52_[+1]_20 chr19:55708324-55708404 2e-05 3_[+1]_69 chr15:75182318-75182398 2e-05 7_[+1]_65 chr1:22755259-22755339 2e-05 18_[+1]_54 chr1:224544447-224544527 2e-05 45_[+1]_27 chr11:66138873-66138953 2e-05 9_[+1]_63 chr13:41837968-41838048 2e-05 10_[+1]_62 chr17:7591570-7591650 2e-05 27_[+1]_45 chr9:101172675-101172755 2e-05 16_[+1]_56 chr19:50163158-50163238 2e-05 9_[+1]_63 chr16:30908469-30908549 2e-05 4_[+1]_68 chr11:134123326-13412340 2e-05 50_[+1]_22 chr10:43048346-43048426 2e-05 61_[+1]_11 chr1:154979443-154979523 2e-05 7_[+1]_65 chr19:57946562-57946642 2e-05 33_[+1]_39 chr19:19887272-19887352 2e-05 44_[+1]_28 chr9:133003022-133003102 2e-05 3_[+1]_69 chr5:55008192-55008272 2e-05 49_[+1]_23 chr1:243419219-243419299 2e-05 56_[+1]_16 chr12:32832085-32832165 2e-05 5_[+1]_67 chr19:49404460-49404540 2e-05 8_[+1]_64 chr5:138775200-138775280 2e-05 58_[+1]_14 chr19:44331386-44331466 2e-05 24_[+1]_48 chr12:861513-861593 2e-05 9_[+1]_63 chr14:36295379-36295459 2e-05 51_[+1]_21 chr19:49422142-49422222 2e-05 2_[+1]_70 chr1:147142659-147142739 2e-05 58_[+1]_14 chr19:49250489-49250569 2e-05 [+1]_72 chr19:49148181-49148261 2e-05 2_[+1]_70 chr19:48922670-48922750 2e-05 3_[+1]_69 chr19:49013931-49014011 2e-05 3_[+1]_69 chr19:54480860-54480940 2e-05 3_[+1]_69 chr3:13933305-13933385 2.8e-05 22_[+1]_50 chr17:19912574-19912654 2.8e-05 8_[+1]_64 chr2:239143008-239143088 2.8e-05 13_[+1]_59 chr19:49469192-49469272 2.8e-05 3_[+1]_69 chr12:56710136-56710216 2.8e-05 1_[+1]_71 chr20:62694376-62694456 3.6e-05 15_[+1]_57 chr5:178286893-178286973 3.6e-05 4_[+1]_68 chr8:30891092-30891172 3.6e-05 26_[+1]_46 chr2:54950547-54950627 3.6e-05 50_[+1]_22 chr6:110501298-110501378 3.6e-05 9_[+1]_63 chr17:46178868-46178948 4.5e-05 30_[+1]_42 chr12:96429425-96429505 4.5e-05 48_[+1]_24 chr3:50397077-50397157 4.5e-05 2_[+1]_70 chr11:450201-450281 4.5e-05 65_[+1]_7 chr4:8160676-8160756 4.5e-05 40_[+1]_32 chr19:45988713-45988793 4.5e-05 1_[+1]_71 chr19:55816992-55817072 4.5e-05 2_[+1]_70 chr10:111985582-11198566 5.4e-05 48_[+1]_24 chr18:56806971-56807051 5.4e-05 67_[+1]_5 chr7:20257080-20257160 5.4e-05 50_[+1]_22 chr19:44809204-44809284 6.2e-05 48_[+1]_24 chr1:243418777-243418857 6.2e-05 10_[+1]_62 chr17:7358816-7358896 6.2e-05 [+1]_72 chr19:55709047-55709127 6.2e-05 3_[+1]_69 chr17:40559666-40559746 7.5e-05 18_[+1]_54 chr6:10147340-10147420 7.5e-05 38_[+1]_34 chr18:32923948-32924028 8.9e-05 4_[+1]_68 chr2:39005285-39005365 8.9e-05 1_[+1]_71 chr6:52929627-52929707 8.9e-05 2_[+1]_70 chr16:19535062-19535142 0.00011 8_[+1]_64 chr11:74109857-74109937 0.00011 56_[+1]_16 chr12:104323514-10432359 0.00011 21_[+1]_51 chr13:52157976-52158056 0.00011 10_[+1]_62 chr14:77924022-77924102 0.00013 35_[+1]_37 chr22:22020238-22020318 0.00013 6_[+1]_66 chr10:72288710-72288790 0.00013 24_[+1]_48 chr17:7123126-7123206 0.00013 24_[+1]_48 chr11:46134683-46134763 0.00014 49_[+1]_23 chr17:7094935-7095015 0.00017 6_[+1]_66 chr19:5790610-5790690 0.00019 38_[+1]_34 chr18:60382257-60382337 0.00019 72_[+1] chr17:16439095-16439175 0.00019 17_[+1]_55 chr17:7118412-7118492 0.00019 [+1]_72 chr19:36208412-36208492 0.00021 8_[+1]_64 chr16:68482608-68482688 0.00021 69_[+1]_3 chr9:72435537-72435617 0.00021 52_[+1]_20 chr19:38720430-38720510 0.00023 42_[+1]_30 chr18:71815675-71815755 0.00025 51_[+1]_21 chr19:55690506-55690586 0.00025 1_[+1]_71 chr20:25677511-25677591 0.00029 21_[+1]_51 chr1:247095509-247095589 0.00031 1_[+1]_71 chr11:64376987-64377067 0.00031 32_[+1]_40 chr2:38893003-38893083 0.00033 18_[+1]_54 chr6:43215024-43215104 0.00037 [+1]_72 chr19:42772884-42772964 0.00038 33_[+1]_39 chr17:38443829-38443909 0.0004 18_[+1]_54 chr11:66035898-66035978 0.0004 54_[+1]_18 chr16:33569517-33569597 0.00051 41_[+1]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTACAWY width=8 seqs=124 chr3:50388506-50388586 ( 3) ACTACAAT 1 chr19:58838292-58838372 ( 5) ACTACAAT 1 chr2:2617281-2617361 ( 40) ACTACAAT 1 chr13:30881224-30881304 ( 49) ACTACAAT 1 chrX:149736803-149736883 ( 24) ACTACAAT 1 chr8:82755024-82755104 ( 3) ACTACAAT 1 chr14:82000459-82000539 ( 11) ACTACAAT 1 chr19:49248608-49248688 ( 3) ACTACAAT 1 chr19:51142556-51142636 ( 3) ACTACAAT 1 chr19:54682359-54682439 ( 3) ACTACAAT 1 chr19:49362001-49362081 ( 9) ACTACAAT 1 chr6:5003901-5003981 ( 66) ACTACAAC 1 chr9:132346481-132346561 ( 14) ACTACATT 1 chr19:40697275-40697355 ( 17) ACTACAAC 1 chr14:73493984-73494064 ( 6) ACTACAAC 1 chr8:103763436-103763516 ( 14) ACTACATT 1 chr12:133532881-13353296 ( 7) ACTACATT 1 chr3:14361216-14361296 ( 33) ACTACATT 1 chr9:132031093-132031173 ( 5) ACTACATT 1 chr9:99616821-99616901 ( 48) ACTACATT 1 chr19:37569247-37569327 ( 32) ACTACATT 1 chr12:124594395-12459447 ( 17) ACTACATT 1 chr9:37920544-37920624 ( 8) ACTACATT 1 chr19:48848303-48848383 ( 24) ACTACAAC 1 chr19:4304529-4304609 ( 29) ACTACATT 1 chr7:100888046-100888126 ( 1) ACTACAAC 1 chr22:33300158-33300238 ( 19) ACTACATT 1 chr4:6374774-6374854 ( 24) ACTACATT 1 chr19:49223924-49224004 ( 37) ACTACAAC 1 chr6:14800257-14800337 ( 20) ACTACATT 1 chr11:73661985-73662065 ( 17) ACTACAAC 1 chr20:49084695-49084775 ( 10) ACTACATT 1 chr19:51152951-51153031 ( 43) ACTACATT 1 chr11:113644471-11364455 ( 60) ACTACAAC 1 chrX:106045780-106045860 ( 53) ACTACAAC 1 chr19:55708324-55708404 ( 4) ACTACAAC 1 chr15:75182318-75182398 ( 8) ACTACATT 1 chr1:22755259-22755339 ( 19) ACTACATT 1 chr1:224544447-224544527 ( 46) ACTACAAC 1 chr11:66138873-66138953 ( 10) ACTACAAC 1 chr13:41837968-41838048 ( 11) ACTACAAC 1 chr17:7591570-7591650 ( 28) ACTACAAC 1 chr9:101172675-101172755 ( 17) ACTACATT 1 chr19:50163158-50163238 ( 10) ACTACAAC 1 chr16:30908469-30908549 ( 5) ACTACATT 1 chr11:134123326-13412340 ( 51) ACTACAAC 1 chr10:43048346-43048426 ( 62) ACTACATT 1 chr1:154979443-154979523 ( 8) ACTACAAC 1 chr19:57946562-57946642 ( 34) ACTACATT 1 chr19:19887272-19887352 ( 45) ACTACAAC 1 chr9:133003022-133003102 ( 4) ACTACATT 1 chr5:55008192-55008272 ( 50) ACTACAAC 1 chr1:243419219-243419299 ( 57) ACTACAAC 1 chr12:32832085-32832165 ( 6) ACTACAAC 1 chr19:49404460-49404540 ( 9) ACTACATT 1 chr5:138775200-138775280 ( 59) ACTACAAC 1 chr19:44331386-44331466 ( 25) ACTACATT 1 chr12:861513-861593 ( 10) ACTACAAC 1 chr14:36295379-36295459 ( 52) ACTACAAC 1 chr19:49422142-49422222 ( 3) ACTACAAC 1 chr1:147142659-147142739 ( 59) ACTACAAC 1 chr19:49250489-49250569 ( 1) ACTACAAC 1 chr19:49148181-49148261 ( 3) ACTACAAC 1 chr19:48922670-48922750 ( 4) ACTACATT 1 chr19:49013931-49014011 ( 4) ACTACAAC 1 chr19:54480860-54480940 ( 4) ACTACAAC 1 chr3:13933305-13933385 ( 23) ACTACATC 1 chr17:19912574-19912654 ( 9) ACTACATC 1 chr2:239143008-239143088 ( 14) ACTACATC 1 chr19:49469192-49469272 ( 4) ACTACATC 1 chr12:56710136-56710216 ( 2) ACTACATC 1 chr20:62694376-62694456 ( 16) ACTACACT 1 chr5:178286893-178286973 ( 5) ACTACACT 1 chr8:30891092-30891172 ( 27) ACTACACT 1 chr2:54950547-54950627 ( 51) ACTACACT 1 chr6:110501298-110501378 ( 10) ACTACACT 1 chr17:46178868-46178948 ( 31) ACTACAAG 1 chr12:96429425-96429505 ( 49) ACTACAAG 1 chr3:50397077-50397157 ( 3) ACTACAAG 1 chr11:450201-450281 ( 66) ACTACAAG 1 chr4:8160676-8160756 ( 41) ACTACAAG 1 chr19:45988713-45988793 ( 2) ACTACAAG 1 chr19:55816992-55817072 ( 3) ACTACAAG 1 chr10:111985582-11198566 ( 49) ACTACGAT 1 chr18:56806971-56807051 ( 68) ACTACGAT 1 chr7:20257080-20257160 ( 51) ACTACGAT 1 chr19:44809204-44809284 ( 49) ACTACAGT 1 chr1:243418777-243418857 ( 11) ACTACAGT 1 chr17:7358816-7358896 ( 1) ACTACAGT 1 chr19:55709047-55709127 ( 4) ACTACAGT 1 chr17:40559666-40559746 ( 19) ACTACACC 1 chr6:10147340-10147420 ( 39) ACTACACC 1 chr18:32923948-32924028 ( 5) ACTACAAA 1 chr2:39005285-39005365 ( 2) ACTACAAA 1 chr6:52929627-52929707 ( 3) ACTACAAA 1 chr16:19535062-19535142 ( 9) ACTACGTT 1 chr11:74109857-74109937 ( 57) ACTACGAC 1 chr12:104323514-10432359 ( 22) ACTACGAC 1 chr13:52157976-52158056 ( 11) ACTACGAC 1 chr14:77924022-77924102 ( 36) ACTACAGC 1 chr22:22020238-22020318 ( 7) ACCACAAT 1 chr10:72288710-72288790 ( 25) ACCACAAT 1 chr17:7123126-7123206 ( 25) ACTACAGC 1 chr11:46134683-46134763 ( 50) ACTGCAAT 1 chr17:7094935-7095015 ( 7) ACTCCAAT 1 chr19:5790610-5790690 ( 39) ACCACATT 1 chr18:60382257-60382337 ( 73) ACCACAAC 1 chr17:16439095-16439175 ( 18) ACCACATT 1 chr17:7118412-7118492 ( 1) ACCACAAC 1 chr19:36208412-36208492 ( 9) ACTGCATT 1 chr16:68482608-68482688 ( 70) ACTGCATT 1 chr9:72435537-72435617 ( 53) ACTGCATT 1 chr19:38720430-38720510 ( 43) ACTACACG 1 chr18:71815675-71815755 ( 52) ACTACTAT 1 chr19:55690506-55690586 ( 2) ACTCCAAC 1 chr20:25677511-25677591 ( 22) ACTACGCT 1 chr1:247095509-247095589 ( 2) ACTACGAG 1 chr11:64376987-64377067 ( 33) ACTATAAC 1 chr2:38893003-38893083 ( 19) ACTACCAT 1 chr6:43215024-43215104 ( 1) ACTCCATC 1 chr19:42772884-42772964 ( 34) ACTACGGT 1 chr17:38443829-38443909 ( 19) ACTACGCC 1 chr11:66035898-66035978 ( 55) ACTACGCC 1 chr16:33569517-33569597 ( 42) ACTGCAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.90166 E= 3.7e-145 231 -1360 -1360 -1360 -1360 176 -1360 -1360 -1360 -261 -1360 227 221 -361 -292 -1360 -1360 175 -1360 -461 213 -519 -166 -461 146 -173 -244 59 -306 42 -192 134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 124 E= 3.7e-145 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.048387 0.000000 0.951613 0.935484 0.024194 0.040323 0.000000 0.000000 0.991935 0.000000 0.008065 0.887097 0.008065 0.096774 0.008065 0.556452 0.088710 0.056452 0.298387 0.024194 0.395161 0.080645 0.500000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 regular expression -------------------------------------------------------------------------------- ACTACA[AT][TC] -------------------------------------------------------------------------------- Time 4.82 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGGARWT MEME-2 width = 8 sites = 150 llr = 1187 E-value = 3.3e-141 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::a33: pos.-specific C 1::::111 probability G :aaa:511 matrix T 9::::159 bits 2.3 2.1 * 1.9 * 1.6 ***** * Relative 1.4 ***** * Entropy 1.2 ***** * (11.4 bits) 0.9 ***** * 0.7 ***** ** 0.5 ***** ** 0.2 ******** 0.0 -------- Multilevel TGGGAGTT consensus AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:5003901-5003981 13 2.28e-05 CGGCGCATCC TGGGAGTT GTAGTCCTGT chr1:156308545-156308625 23 2.28e-05 CAGGGTGAAG TGGGAGTT GTAGTCTTAC chr10:103113630-10311371 56 2.28e-05 CAGTGAACTG TGGGAGTT GCGGTTCACG chrX:106362050-106362130 61 2.28e-05 CATGGGGCTC TGGGAATT GTAGTAGCAC chr20:62694376-62694456 55 2.28e-05 GCGTGGCGCC TGGGAGTT GTGGTCCAGA chr1:155990743-155990823 50 2.28e-05 CAATGCCTTG TGGGAGTT GTAGTTCTTG chr16:30103260-30103340 69 2.28e-05 CGGGGGCCGC TGGGAGTT GCAG chr10:102673111-10267319 59 2.28e-05 CAGGGGCTAC TGGGAGTT GGAGTTTGCT chr3:50397077-50397157 65 2.28e-05 CGGGGTGTGC TGGGAGTT GTAGTTCT chr19:42463547-42463627 45 2.28e-05 CCGAGTATTG TGGGAGTT GTAGTCCTGA chr11:66138873-66138953 58 2.28e-05 AGTCGGCTGA TGGGAATT GTAGTTCGAT chr15:41099707-41099787 24 2.28e-05 CCTAGCCCTC TGGGAATT GTGTTCTGGG chr13:41837968-41838048 44 2.28e-05 CAAAGAATCC TGGGAGTT GTAGTTTACC chr2:202316287-202316367 62 2.28e-05 CAAGACCTGC TGGGAATT GTAGTTTCCT chr19:49479588-49479668 72 2.28e-05 CAGGGGCTGC TGGGAGTT G chr5:74807658-74807738 50 2.28e-05 CGCAGCCTCC TGGGAGTT GTAGTCGCGA chr19:50163158-50163238 68 2.28e-05 CTAGGGCTGC TGGGAGTT GTAGT chr16:31106263-31106343 39 2.28e-05 CCAGGCATGA TGGGAGTT GTAGTCGGCG chr1:154979443-154979523 51 2.28e-05 TGGTGCACAC TGGGAGTT GTAGTCCTTG chr6:15245639-15245719 38 2.28e-05 CGGGGCAGGC TGGGAATT GTAGTTCCCA chr14:81408128-81408208 8 2.28e-05 GGCCGTC TGGGAGTT GTAGTCCATC chr22:41840447-41840527 25 2.28e-05 CTCTGCACTC TGGGAATT GTAGTCCTCA chr20:48732486-48732566 60 2.28e-05 CAGTGCCTGA TGGGAGTT GTAGTACGTC chr6:43215024-43215104 60 2.28e-05 CTCGGCCTGC TGGGAGTT GTAGTCTCAG chr11:64387388-64387468 21 2.28e-05 CAAGAACTGA TGGGAGTT GTAGTTCCTA chr19:49422142-49422222 71 2.28e-05 AAAGGACTGC TGGGAGTT GA chr17:7358816-7358896 71 2.28e-05 TTGAGCATCA TGGGAGTT GT chr6:44101522-44101602 51 2.28e-05 CATGGCACTC TGGGAGTT GTAGTGCTCA chr19:49148181-49148261 72 2.28e-05 CAGAGCCCCG TGGGAGTT G chr6:31866312-31866392 68 2.28e-05 CAGAGCTTTC TGGGAATT GTAGT chr19:507891-507971 62 2.28e-05 CGGGGCTTGC TGGGAGTT GTAGTGCGCG chr19:55690506-55690586 70 2.28e-05 CGAGTCATGC TGGGAGTT GTA chr19:55815805-55815885 67 2.28e-05 TAGAGCCTCC TGGGAGTT GTAGTC chr19:49248608-49248688 71 2.28e-05 CGTTGCCTTC TGGGAGTT GT chr19:49013931-49014011 72 2.28e-05 CAAGGCATTG TGGGAGTT G chr17:7118412-7118492 71 2.28e-05 CGGGGCCTTA TGGGAGTT GG chr19:51142556-51142636 72 2.28e-05 CAGGATCTGC TGGGAGTT G chr19:49228254-49228334 66 2.28e-05 CAAAGTCTTC TGGGAGTT GTAGTCC chr19:49486856-49486936 65 2.28e-05 AAAGGCCTTC TGGGAGTT GTAGTTCT chr19:54396434-54396514 63 2.28e-05 CAGGGTCTGA TGGGAATT ATAGTTCCTA chr19:55831281-55831361 67 2.28e-05 CGGGGCATGC TGGGAGTT GTAGTT chr19:49416530-49416610 68 2.28e-05 CAGGGTCTGC TGGGAGTT GTAGT chr19:37178350-37178430 41 4.61e-05 CGGGCGCCTG TGGGAAAT GTAGTCCAAG chr10:71754207-71754287 55 4.61e-05 caaaggcagc tgggaaat gtagtcttta chr11:36355674-36355754 56 4.61e-05 caaaggaggc tgggaaat gtagtcttta chr10:72288710-72288790 49 4.61e-05 caagggaggc tgggaaat gtagtcttca chr20:21077058-21077138 63 4.61e-05 caagggaggc tgggaaat gtagttcagc chr16:33569517-33569597 56 4.61e-05 caaggaatgc tgggaaat gtagtctttc chr1:20767408-20767488 68 4.61e-05 caagggaggc tgggaaat gtagt chr19:49469192-49469272 73 4.61e-05 CGTGGGCTTC TGGGAGAT chr9:101172675-101172755 70 4.61e-05 gaagcggtca tgggagAT TAG chr19:49947068-49947148 63 4.61e-05 CGAGGGCCGC TGGGAGAT GTAGTTCTCT chr16:30939332-30939412 73 4.61e-05 CAAGGACTGT TGGGAGAT chr16:29687603-29687683 29 4.61e-05 cagaggaagc tgggaaat gtagtttagt chr4:7075460-7075540 63 4.61e-05 caaaggatgc tgggaaat gtagttttta chr6:6890940-6891020 71 4.61e-05 caaggggacc tgggaaat gt chr19:37861891-37861971 17 4.61e-05 CGGGGTTCTC TGGGAGAT GTAGTTCAAC chr10:38383154-38383234 62 4.61e-05 CGAGGGCTTG TGGGAAAT GAAGCGTGCA chr1:205744611-205744691 66 4.61e-05 CGAAGcctcc tgggaaat gtagtat chr3:98241881-98241961 60 4.61e-05 CGGCGCATTG TGGGAGAT GTAGTTCAGC chr19:38270225-38270305 21 4.61e-05 CGTTGCCCTC TGGGAAAT GTAGTTTAAG chr19:48907016-48907096 14 4.61e-05 CATTGCATGC TGGGAGAT GTAGTCTCCT chr19:45988713-45988793 71 4.61e-05 CAGAGCCTCT TGGGAAAT GT chr19:7616337-7616417 14 4.61e-05 CAGAGCGTGC TGGGAGAT GTAGTCCGGC chr17:7094935-7095015 70 4.61e-05 CAGGGGCTGC TGGGAAAT GTA chr9:72435537-72435617 62 4.61e-05 CACTGCATTC TGGGAAAT GTAGTTTCTT chr2:27319252-27319332 58 4.61e-05 CAGTGCATTC TGGGAGAT GCAGTCTCCA chr2:23598481-23598561 28 4.61e-05 gccaggaTGC TGGGAGAT GTAGTctcac chr5:178157709-178157789 29 4.61e-05 CTGAGGCCGC TGGGAAAT GGAGTCCACG chr19:50651545-50651625 68 4.61e-05 GAGGGAATGC TGGGAAAT GGAGT chr19:54411490-54411570 66 4.61e-05 CCAGGGCTGA TGGGAAAT GTAGTCT chr19:49385141-49385221 69 4.61e-05 CAAGTGATGA TGGGAGAT GTAG chr19:54682359-54682439 73 4.61e-05 TGGGGCCTGC TGGGAGAT chr19:54480860-54480940 72 4.61e-05 CGGGGTCTCA TGGGAAAT G chr2:18741926-18742006 49 5.94e-05 TGGGGCATGC TGGGACTT GTAGTTTCCC chr18:60382257-60382337 20 5.94e-05 AAAGGACCGC TGGGACTT GTAGTCCACC chr10:92631672-92631752 60 5.94e-05 CGGACGGTCA TGGGACTT CAGCATGGCG chr19:4066018-4066098 25 5.94e-05 CGGGGCACCC TGGGACTT GTAGTCCAAG chr19:10828075-10828155 30 5.94e-05 AGATGCGCTC TGGGACTT GTAGTTTTCC chr8:82755024-82755104 61 5.94e-05 CTTTGCATCA TGGGACTT GTAGTCATCA chr16:46918118-46918198 26 5.94e-05 CGGGGCGCTG TGGGACTT GTAGTTCGCG chr17:40559666-40559746 63 5.94e-05 CAGGGCATGC TGGGACTT GTAGTCTCTA chr16:68482608-68482688 6 5.94e-05 CCTTC TGGGACTT ATAGTTCTTT chr11:46134683-46134763 64 5.94e-05 CAATGCATAC TGGGACTT GTAGTAAGT chr3:50388506-50388586 71 6.83e-05 TGGTACACGC TGGGATTT GT chr16:58426721-58426801 64 6.83e-05 CGCTGCCCTT TGGGATTT GTAGTTTTC chr10:104262586-10426266 51 6.83e-05 CGCAGTACCC TGGGATTT GTGGTCTCCC chr4:104021022-104021102 18 6.83e-05 TAATGCATGC TGGGATTT GTAGTTTCCC chr19:55816992-55817072 70 6.83e-05 CTGGGGCTCA TGGGATTT GTA chr19:49310036-49310116 61 8.18e-05 TGGAGGATTC TGGGACAT GCAGTTTCAT chr2:241525730-241525810 62 1.25e-04 CGGCGCATGC TGGGAGCT GTAGTCTGCG chr17:77005881-77005961 54 1.25e-04 CGAGGGCTGC TGGGAGCT GTGGtttgtg chr19:44488241-44488321 30 1.25e-04 TGTGGAGTCG TGGGAACT TTGGCTCAGG chr1:154842891-154842971 49 1.25e-04 CAGCGAGGAC TGGGAACT GTAGTTTTTG chr12:88535977-88536057 52 1.25e-04 TTCTGCATGC TGGGAACT GAAGTCCCTG chr7:150689951-150690031 67 1.25e-04 ACCTGCATTC TGGGAACT GTAGTT chr3:69788455-69788535 13 1.25e-04 CCTGGCCTTC TGGGAGCT GTAGTTTTCG chr19:58838292-58838372 60 1.59e-04 CGGAGGACGC CGGGAATT GTAGTCCTGG chr11:74109857-74109937 5 1.59e-04 CTCA CGGGAGTT GTAGTTCTTT chr18:9913576-9913656 70 1.59e-04 GGGGGCATGC CGGGAGTT GTA chr12:110151321-11015140 60 1.59e-04 CGCAGCATGC CGGGAGTT GCAGTCCTCG chr22:30163037-30163117 17 1.93e-04 CAGAGAGCTT TGGGAATC TAAGCCGGGA chr19:52097750-52097830 45 1.93e-04 CAGGGGCACC TGGGAGTC GTAGGCGGAT chr2:136288406-136288486 68 1.93e-04 AAAAGCATGT TGGGAATC GTAGT chr2:86332685-86332765 70 1.93e-04 AAAGCGCTTC TGGGAATC GTA chr19:44598408-44598488 8 2.28e-04 GGAATTC TGGGAAGT GTAGTCCAGA chr11:125773086-12577316 59 2.28e-04 CGAGCCCTCA TGGGAGGT GTAGTCCAAG chr19:41084530-41084610 24 2.28e-04 TGAGATACAG TGGGAGGT GTAGTTCCCT chr19:49017220-49017300 29 2.28e-04 CAGAGGCTTA TGGGAGGT GTAGTCCTGG chr16:15150015-15150095 22 2.63e-04 CAAGGCCTCA CGGGAAAT GTAGTCCAAA chrX:70315604-70315684 17 2.63e-04 CGAAGCAGGA CGGGAGAT GTAGTCCTCA chr9:15422705-15422785 36 2.63e-04 CATGGCCTGC CGGGAAAT GTAGTTTCTG chr15:40986886-40986966 53 2.63e-04 CGATGCATGC CGGGAGAT GTAGTCCCGG chr16:30908469-30908549 46 2.63e-04 CTGTGCGTTT CGGGAAAT GGAGTCCCTC chrX:134478609-134478689 67 2.63e-04 TGTGGCCTGC CGGGAGAT GTAGTC chr19:49250489-49250569 72 2.63e-04 CATAGCTTTC CGGGAAAT G chr18:77439402-77439482 1 3.33e-04 . TGGGAGTG GAGGAGAGCG chr19:36208412-36208492 60 3.33e-04 CGCGGCACCC TGGGAGTG GTAGTCCACG chr11:66035898-66035978 24 3.33e-04 CCAGCAGTGA TGGGAGTG GGCGCGGAGG chr1:247095509-247095589 72 3.33e-04 cgTGCGCAGT TGGGAGTG G chr6:110501298-110501378 58 3.33e-04 CGCTGCACGC TGGGAGTG CAGGACCGCG chr18:56806971-56807051 5 3.33e-04 ATTC TGGGAGTG GTAGTTTTCT chr1:31327123-31327203 68 3.33e-04 caaagcacgc tgggaaac gtagt chr11:65635650-65635730 71 3.33e-04 CAAAGCCCCC TGGGAGAC GT chr14:82000459-82000539 60 3.33e-04 GGGGTGCTCT TGGGAAAC GTAGTCCATC chr20:62289892-62289972 67 3.53e-04 CGCTGCATTT TGGGACCT GTAGTT chr12:56710136-56710216 72 3.53e-04 CAAGCTATCC TGGGACCT G chr16:58664402-58664482 72 4.71e-04 CAGTGCATGC TGGGGGTT G chr16:31045641-31045721 53 4.71e-04 CCAGGGATTG TGGGGGTT GTAGTTCCAC chr1:243418777-243418857 71 4.71e-04 CTGGGCATGC TAGGAGTT GT chr1:47799895-47799975 65 4.71e-04 cgcggcgTGC CGGGACTT GTAGTCCG chr1:234812114-234812194 33 4.71e-04 cagtgcatgc tgggggtt gtagttctcg chr19:46027168-46027248 68 4.71e-04 CGAATGGTGC TGGGGATT GTAGT chr6:41703386-41703466 72 4.84e-04 CTAGGCACGC CGGGATTT G chr19:50836841-50836921 62 5.04e-04 AGGGCCTTCA TGGGACTC GTAGTACAAG chr10:103892652-10389273 64 5.38e-04 CACGGCTCTC TGGGATTC GTAGTCTTG chr11:114310072-11431015 64 5.38e-04 CACCGTACGC TGGGACGT GTGGTTTCA chr19:55677451-55677531 63 5.38e-04 CTGAGTATTC TGGGATTC GCAGTCCGCA chr12:96429425-96429505 31 6.22e-04 AGACGAGCGT TGGGGGAT GGGTGAAGGA chr8:103763436-103763516 70 6.22e-04 atgtggccag tgggatgt aag chr4:79575018-79575098 39 6.22e-04 caggggtgac taggaaat gtagtttttg chr13:31736510-31736590 29 6.22e-04 CCTTGCATGC TGGGATGT GTAGTCCTGG chr17:7760558-7760638 66 6.87e-04 CAGAGGCTGC CGGGAGCT GCAGTTC chr12:104323514-10432359 71 6.87e-04 CGTTGCATGC CGGGAGCT GT chr19:48866436-48866516 67 8.05e-04 CGAAGCCTGC TGGGAGCC GTAGTC chr4:2538126-2538206 19 8.56e-04 CAAGGCCTGA CGGGAATC GTGGTCCACC chr19:48922670-48922750 55 9.08e-04 TAGGGCCTCT CGGGAGGT GCCAGATGCC chr11:134123326-13412340 72 9.58e-04 CAGGGTGCAG TGGGACAG G chr17:7591570-7591650 68 1.10e-03 TAGGGCTTGA TGGGAACG GGAAA chr11:113644471-11364455 7 1.20e-03 GCCTGC CGGGAAAC GGAGTCTCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:5003901-5003981 2.3e-05 12_[+2]_60 chr1:156308545-156308625 2.3e-05 22_[+2]_50 chr10:103113630-10311371 2.3e-05 55_[+2]_17 chrX:106362050-106362130 2.3e-05 60_[+2]_12 chr20:62694376-62694456 2.3e-05 54_[+2]_18 chr1:155990743-155990823 2.3e-05 49_[+2]_23 chr16:30103260-30103340 2.3e-05 68_[+2]_4 chr10:102673111-10267319 2.3e-05 58_[+2]_14 chr3:50397077-50397157 2.3e-05 64_[+2]_8 chr19:42463547-42463627 2.3e-05 44_[+2]_28 chr11:66138873-66138953 2.3e-05 57_[+2]_15 chr15:41099707-41099787 2.3e-05 23_[+2]_49 chr13:41837968-41838048 2.3e-05 43_[+2]_29 chr2:202316287-202316367 2.3e-05 61_[+2]_11 chr19:49479588-49479668 2.3e-05 71_[+2]_1 chr5:74807658-74807738 2.3e-05 49_[+2]_23 chr19:50163158-50163238 2.3e-05 67_[+2]_5 chr16:31106263-31106343 2.3e-05 38_[+2]_34 chr1:154979443-154979523 2.3e-05 50_[+2]_22 chr6:15245639-15245719 2.3e-05 37_[+2]_35 chr14:81408128-81408208 2.3e-05 7_[+2]_65 chr22:41840447-41840527 2.3e-05 24_[+2]_48 chr20:48732486-48732566 2.3e-05 59_[+2]_13 chr6:43215024-43215104 2.3e-05 59_[+2]_13 chr11:64387388-64387468 2.3e-05 20_[+2]_52 chr19:49422142-49422222 2.3e-05 70_[+2]_2 chr17:7358816-7358896 2.3e-05 70_[+2]_2 chr6:44101522-44101602 2.3e-05 50_[+2]_22 chr19:49148181-49148261 2.3e-05 71_[+2]_1 chr6:31866312-31866392 2.3e-05 67_[+2]_5 chr19:507891-507971 2.3e-05 61_[+2]_11 chr19:55690506-55690586 2.3e-05 69_[+2]_3 chr19:55815805-55815885 2.3e-05 66_[+2]_6 chr19:49248608-49248688 2.3e-05 70_[+2]_2 chr19:49013931-49014011 2.3e-05 71_[+2]_1 chr17:7118412-7118492 2.3e-05 70_[+2]_2 chr19:51142556-51142636 2.3e-05 71_[+2]_1 chr19:49228254-49228334 2.3e-05 65_[+2]_7 chr19:49486856-49486936 2.3e-05 64_[+2]_8 chr19:54396434-54396514 2.3e-05 62_[+2]_10 chr19:55831281-55831361 2.3e-05 66_[+2]_6 chr19:49416530-49416610 2.3e-05 67_[+2]_5 chr19:37178350-37178430 4.6e-05 40_[+2]_32 chr10:71754207-71754287 4.6e-05 54_[+2]_18 chr11:36355674-36355754 4.6e-05 55_[+2]_17 chr10:72288710-72288790 4.6e-05 48_[+2]_24 chr20:21077058-21077138 4.6e-05 62_[+2]_10 chr16:33569517-33569597 4.6e-05 55_[+2]_17 chr1:20767408-20767488 4.6e-05 67_[+2]_5 chr19:49469192-49469272 4.6e-05 72_[+2] chr9:101172675-101172755 4.6e-05 69_[+2]_3 chr19:49947068-49947148 4.6e-05 62_[+2]_10 chr16:30939332-30939412 4.6e-05 72_[+2] chr16:29687603-29687683 4.6e-05 28_[+2]_44 chr4:7075460-7075540 4.6e-05 62_[+2]_10 chr6:6890940-6891020 4.6e-05 70_[+2]_2 chr19:37861891-37861971 4.6e-05 16_[+2]_56 chr10:38383154-38383234 4.6e-05 61_[+2]_11 chr1:205744611-205744691 4.6e-05 65_[+2]_7 chr3:98241881-98241961 4.6e-05 59_[+2]_13 chr19:38270225-38270305 4.6e-05 20_[+2]_52 chr19:48907016-48907096 4.6e-05 13_[+2]_59 chr19:45988713-45988793 4.6e-05 70_[+2]_2 chr19:7616337-7616417 4.6e-05 13_[+2]_59 chr17:7094935-7095015 4.6e-05 69_[+2]_3 chr9:72435537-72435617 4.6e-05 61_[+2]_11 chr2:27319252-27319332 4.6e-05 57_[+2]_15 chr2:23598481-23598561 4.6e-05 27_[+2]_45 chr5:178157709-178157789 4.6e-05 28_[+2]_44 chr19:50651545-50651625 4.6e-05 67_[+2]_5 chr19:54411490-54411570 4.6e-05 65_[+2]_7 chr19:49385141-49385221 4.6e-05 68_[+2]_4 chr19:54682359-54682439 4.6e-05 72_[+2] chr19:54480860-54480940 4.6e-05 71_[+2]_1 chr2:18741926-18742006 5.9e-05 48_[+2]_24 chr18:60382257-60382337 5.9e-05 19_[+2]_53 chr10:92631672-92631752 5.9e-05 59_[+2]_13 chr19:4066018-4066098 5.9e-05 24_[+2]_48 chr19:10828075-10828155 5.9e-05 29_[+2]_43 chr8:82755024-82755104 5.9e-05 60_[+2]_12 chr16:46918118-46918198 5.9e-05 25_[+2]_47 chr17:40559666-40559746 5.9e-05 62_[+2]_10 chr16:68482608-68482688 5.9e-05 5_[+2]_67 chr11:46134683-46134763 5.9e-05 63_[+2]_9 chr3:50388506-50388586 6.8e-05 70_[+2]_2 chr16:58426721-58426801 6.8e-05 63_[+2]_9 chr10:104262586-10426266 6.8e-05 50_[+2]_22 chr4:104021022-104021102 6.8e-05 17_[+2]_55 chr19:55816992-55817072 6.8e-05 69_[+2]_3 chr19:49310036-49310116 8.2e-05 60_[+2]_12 chr2:241525730-241525810 0.00012 61_[+2]_11 chr17:77005881-77005961 0.00012 53_[+2]_19 chr19:44488241-44488321 0.00012 29_[+2]_43 chr1:154842891-154842971 0.00012 48_[+2]_24 chr12:88535977-88536057 0.00012 51_[+2]_21 chr7:150689951-150690031 0.00012 66_[+2]_6 chr3:69788455-69788535 0.00012 12_[+2]_60 chr19:58838292-58838372 0.00016 59_[+2]_13 chr11:74109857-74109937 0.00016 4_[+2]_68 chr18:9913576-9913656 0.00016 69_[+2]_3 chr12:110151321-11015140 0.00016 59_[+2]_13 chr22:30163037-30163117 0.00019 16_[+2]_56 chr19:52097750-52097830 0.00019 44_[+2]_28 chr2:136288406-136288486 0.00019 67_[+2]_5 chr2:86332685-86332765 0.00019 69_[+2]_3 chr19:44598408-44598488 0.00023 7_[+2]_65 chr11:125773086-12577316 0.00023 58_[+2]_14 chr19:41084530-41084610 0.00023 23_[+2]_49 chr19:49017220-49017300 0.00023 28_[+2]_44 chr16:15150015-15150095 0.00026 21_[+2]_51 chrX:70315604-70315684 0.00026 16_[+2]_56 chr9:15422705-15422785 0.00026 35_[+2]_37 chr15:40986886-40986966 0.00026 52_[+2]_20 chr16:30908469-30908549 0.00026 45_[+2]_27 chrX:134478609-134478689 0.00026 66_[+2]_6 chr19:49250489-49250569 0.00026 71_[+2]_1 chr18:77439402-77439482 0.00033 [+2]_72 chr19:36208412-36208492 0.00033 59_[+2]_13 chr11:66035898-66035978 0.00033 23_[+2]_49 chr1:247095509-247095589 0.00033 71_[+2]_1 chr6:110501298-110501378 0.00033 57_[+2]_15 chr18:56806971-56807051 0.00033 4_[+2]_68 chr1:31327123-31327203 0.00033 67_[+2]_5 chr11:65635650-65635730 0.00033 70_[+2]_2 chr14:82000459-82000539 0.00033 59_[+2]_13 chr20:62289892-62289972 0.00035 66_[+2]_6 chr12:56710136-56710216 0.00035 71_[+2]_1 chr16:58664402-58664482 0.00047 71_[+2]_1 chr16:31045641-31045721 0.00047 52_[+2]_20 chr1:243418777-243418857 0.00047 70_[+2]_2 chr1:47799895-47799975 0.00047 64_[+2]_8 chr1:234812114-234812194 0.00047 32_[+2]_40 chr19:46027168-46027248 0.00047 67_[+2]_5 chr6:41703386-41703466 0.00048 71_[+2]_1 chr19:50836841-50836921 0.0005 61_[+2]_11 chr10:103892652-10389273 0.00054 63_[+2]_9 chr11:114310072-11431015 0.00054 63_[+2]_9 chr19:55677451-55677531 0.00054 62_[+2]_10 chr12:96429425-96429505 0.00062 30_[+2]_42 chr8:103763436-103763516 0.00062 69_[+2]_3 chr4:79575018-79575098 0.00062 38_[+2]_34 chr13:31736510-31736590 0.00062 28_[+2]_44 chr17:7760558-7760638 0.00069 65_[+2]_7 chr12:104323514-10432359 0.00069 70_[+2]_2 chr19:48866436-48866516 0.00081 66_[+2]_6 chr4:2538126-2538206 0.00086 18_[+2]_54 chr19:48922670-48922750 0.00091 54_[+2]_18 chr11:134123326-13412340 0.00096 71_[+2]_1 chr17:7591570-7591650 0.0011 67_[+2]_5 chr11:113644471-11364455 0.0012 6_[+2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGGARWT width=8 seqs=150 chr6:5003901-5003981 ( 13) TGGGAGTT 1 chr1:156308545-156308625 ( 23) TGGGAGTT 1 chr10:103113630-10311371 ( 56) TGGGAGTT 1 chrX:106362050-106362130 ( 61) TGGGAATT 1 chr20:62694376-62694456 ( 55) TGGGAGTT 1 chr1:155990743-155990823 ( 50) TGGGAGTT 1 chr16:30103260-30103340 ( 69) TGGGAGTT 1 chr10:102673111-10267319 ( 59) TGGGAGTT 1 chr3:50397077-50397157 ( 65) TGGGAGTT 1 chr19:42463547-42463627 ( 45) TGGGAGTT 1 chr11:66138873-66138953 ( 58) TGGGAATT 1 chr15:41099707-41099787 ( 24) TGGGAATT 1 chr13:41837968-41838048 ( 44) TGGGAGTT 1 chr2:202316287-202316367 ( 62) TGGGAATT 1 chr19:49479588-49479668 ( 72) TGGGAGTT 1 chr5:74807658-74807738 ( 50) TGGGAGTT 1 chr19:50163158-50163238 ( 68) TGGGAGTT 1 chr16:31106263-31106343 ( 39) TGGGAGTT 1 chr1:154979443-154979523 ( 51) TGGGAGTT 1 chr6:15245639-15245719 ( 38) TGGGAATT 1 chr14:81408128-81408208 ( 8) TGGGAGTT 1 chr22:41840447-41840527 ( 25) TGGGAATT 1 chr20:48732486-48732566 ( 60) TGGGAGTT 1 chr6:43215024-43215104 ( 60) TGGGAGTT 1 chr11:64387388-64387468 ( 21) TGGGAGTT 1 chr19:49422142-49422222 ( 71) TGGGAGTT 1 chr17:7358816-7358896 ( 71) TGGGAGTT 1 chr6:44101522-44101602 ( 51) TGGGAGTT 1 chr19:49148181-49148261 ( 72) TGGGAGTT 1 chr6:31866312-31866392 ( 68) TGGGAATT 1 chr19:507891-507971 ( 62) TGGGAGTT 1 chr19:55690506-55690586 ( 70) TGGGAGTT 1 chr19:55815805-55815885 ( 67) TGGGAGTT 1 chr19:49248608-49248688 ( 71) TGGGAGTT 1 chr19:49013931-49014011 ( 72) TGGGAGTT 1 chr17:7118412-7118492 ( 71) TGGGAGTT 1 chr19:51142556-51142636 ( 72) TGGGAGTT 1 chr19:49228254-49228334 ( 66) TGGGAGTT 1 chr19:49486856-49486936 ( 65) TGGGAGTT 1 chr19:54396434-54396514 ( 63) TGGGAATT 1 chr19:55831281-55831361 ( 67) TGGGAGTT 1 chr19:49416530-49416610 ( 68) TGGGAGTT 1 chr19:37178350-37178430 ( 41) TGGGAAAT 1 chr10:71754207-71754287 ( 55) TGGGAAAT 1 chr11:36355674-36355754 ( 56) TGGGAAAT 1 chr10:72288710-72288790 ( 49) TGGGAAAT 1 chr20:21077058-21077138 ( 63) TGGGAAAT 1 chr16:33569517-33569597 ( 56) TGGGAAAT 1 chr1:20767408-20767488 ( 68) TGGGAAAT 1 chr19:49469192-49469272 ( 73) TGGGAGAT 1 chr9:101172675-101172755 ( 70) TGGGAGAT 1 chr19:49947068-49947148 ( 63) TGGGAGAT 1 chr16:30939332-30939412 ( 73) TGGGAGAT 1 chr16:29687603-29687683 ( 29) TGGGAAAT 1 chr4:7075460-7075540 ( 63) TGGGAAAT 1 chr6:6890940-6891020 ( 71) TGGGAAAT 1 chr19:37861891-37861971 ( 17) TGGGAGAT 1 chr10:38383154-38383234 ( 62) TGGGAAAT 1 chr1:205744611-205744691 ( 66) TGGGAAAT 1 chr3:98241881-98241961 ( 60) TGGGAGAT 1 chr19:38270225-38270305 ( 21) TGGGAAAT 1 chr19:48907016-48907096 ( 14) TGGGAGAT 1 chr19:45988713-45988793 ( 71) TGGGAAAT 1 chr19:7616337-7616417 ( 14) TGGGAGAT 1 chr17:7094935-7095015 ( 70) TGGGAAAT 1 chr9:72435537-72435617 ( 62) TGGGAAAT 1 chr2:27319252-27319332 ( 58) TGGGAGAT 1 chr2:23598481-23598561 ( 28) TGGGAGAT 1 chr5:178157709-178157789 ( 29) TGGGAAAT 1 chr19:50651545-50651625 ( 68) TGGGAAAT 1 chr19:54411490-54411570 ( 66) TGGGAAAT 1 chr19:49385141-49385221 ( 69) TGGGAGAT 1 chr19:54682359-54682439 ( 73) TGGGAGAT 1 chr19:54480860-54480940 ( 72) TGGGAAAT 1 chr2:18741926-18742006 ( 49) TGGGACTT 1 chr18:60382257-60382337 ( 20) TGGGACTT 1 chr10:92631672-92631752 ( 60) TGGGACTT 1 chr19:4066018-4066098 ( 25) TGGGACTT 1 chr19:10828075-10828155 ( 30) TGGGACTT 1 chr8:82755024-82755104 ( 61) TGGGACTT 1 chr16:46918118-46918198 ( 26) TGGGACTT 1 chr17:40559666-40559746 ( 63) TGGGACTT 1 chr16:68482608-68482688 ( 6) TGGGACTT 1 chr11:46134683-46134763 ( 64) TGGGACTT 1 chr3:50388506-50388586 ( 71) TGGGATTT 1 chr16:58426721-58426801 ( 64) TGGGATTT 1 chr10:104262586-10426266 ( 51) TGGGATTT 1 chr4:104021022-104021102 ( 18) TGGGATTT 1 chr19:55816992-55817072 ( 70) TGGGATTT 1 chr19:49310036-49310116 ( 61) TGGGACAT 1 chr2:241525730-241525810 ( 62) TGGGAGCT 1 chr17:77005881-77005961 ( 54) TGGGAGCT 1 chr19:44488241-44488321 ( 30) TGGGAACT 1 chr1:154842891-154842971 ( 49) TGGGAACT 1 chr12:88535977-88536057 ( 52) TGGGAACT 1 chr7:150689951-150690031 ( 67) TGGGAACT 1 chr3:69788455-69788535 ( 13) TGGGAGCT 1 chr19:58838292-58838372 ( 60) CGGGAATT 1 chr11:74109857-74109937 ( 5) CGGGAGTT 1 chr18:9913576-9913656 ( 70) CGGGAGTT 1 chr12:110151321-11015140 ( 60) CGGGAGTT 1 chr22:30163037-30163117 ( 17) TGGGAATC 1 chr19:52097750-52097830 ( 45) TGGGAGTC 1 chr2:136288406-136288486 ( 68) TGGGAATC 1 chr2:86332685-86332765 ( 70) TGGGAATC 1 chr19:44598408-44598488 ( 8) TGGGAAGT 1 chr11:125773086-12577316 ( 59) TGGGAGGT 1 chr19:41084530-41084610 ( 24) TGGGAGGT 1 chr19:49017220-49017300 ( 29) TGGGAGGT 1 chr16:15150015-15150095 ( 22) CGGGAAAT 1 chrX:70315604-70315684 ( 17) CGGGAGAT 1 chr9:15422705-15422785 ( 36) CGGGAAAT 1 chr15:40986886-40986966 ( 53) CGGGAGAT 1 chr16:30908469-30908549 ( 46) CGGGAAAT 1 chrX:134478609-134478689 ( 67) CGGGAGAT 1 chr19:49250489-49250569 ( 72) CGGGAAAT 1 chr18:77439402-77439482 ( 1) TGGGAGTG 1 chr19:36208412-36208492 ( 60) TGGGAGTG 1 chr11:66035898-66035978 ( 24) TGGGAGTG 1 chr1:247095509-247095589 ( 72) TGGGAGTG 1 chr6:110501298-110501378 ( 58) TGGGAGTG 1 chr18:56806971-56807051 ( 5) TGGGAGTG 1 chr1:31327123-31327203 ( 68) TGGGAAAC 1 chr11:65635650-65635730 ( 71) TGGGAGAC 1 chr14:82000459-82000539 ( 60) TGGGAAAC 1 chr20:62289892-62289972 ( 67) TGGGACCT 1 chr12:56710136-56710216 ( 72) TGGGACCT 1 chr16:58664402-58664482 ( 72) TGGGGGTT 1 chr16:31045641-31045721 ( 53) TGGGGGTT 1 chr1:243418777-243418857 ( 71) TAGGAGTT 1 chr1:47799895-47799975 ( 65) CGGGACTT 1 chr1:234812114-234812194 ( 33) TGGGGGTT 1 chr19:46027168-46027248 ( 68) TGGGGATT 1 chr6:41703386-41703466 ( 72) CGGGATTT 1 chr19:50836841-50836921 ( 62) TGGGACTC 1 chr10:103892652-10389273 ( 64) TGGGATTC 1 chr11:114310072-11431015 ( 64) TGGGACGT 1 chr19:55677451-55677531 ( 63) TGGGATTC 1 chr12:96429425-96429505 ( 31) TGGGGGAT 1 chr8:103763436-103763516 ( 70) TGGGATGT 1 chr4:79575018-79575098 ( 39) TAGGAAAT 1 chr13:31736510-31736590 ( 29) TGGGATGT 1 chr17:7760558-7760638 ( 66) CGGGAGCT 1 chr12:104323514-10432359 ( 71) CGGGAGCT 1 chr19:48866436-48866516 ( 67) TGGGAGCC 1 chr4:2538126-2538206 ( 19) CGGGAATC 1 chr19:48922670-48922750 ( 55) CGGGAGGT 1 chr11:134123326-13412340 ( 72) TGGGACAG 1 chr17:7591570-7591650 ( 68) TGGGAACG 1 chr11:113644471-11364455 ( 7) CGGGAAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.35419 E= 3.3e-141 -1387 -130 -1387 215 -392 -1387 169 -1387 -1387 -1387 171 -1387 -1387 -1387 171 -1387 226 -1387 -320 -1387 66 -138 71 -157 63 -177 -252 147 -1387 -177 -252 212 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 150 E= 3.3e-141 0.000000 0.120000 0.000000 0.880000 0.013333 0.000000 0.986667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.966667 0.000000 0.033333 0.000000 0.320000 0.113333 0.500000 0.066667 0.313333 0.086667 0.053333 0.546667 0.000000 0.086667 0.053333 0.860000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 regular expression -------------------------------------------------------------------------------- TGGGA[GA][TA]T -------------------------------------------------------------------------------- Time 8.33 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCCAGSA MEME-3 width = 8 sites = 157 llr = 1185 E-value = 1.9e-128 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::9127 pos.-specific C 1aaa::51 probability G ::::1832 matrix T 9::::1:: bits 2.3 2.1 1.9 **** 1.6 ***** Relative 1.4 ***** Entropy 1.2 ***** (10.9 bits) 0.9 ****** * 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel TCCCAGCA consensus G sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:132346481-132346561 22 1.87e-05 aaactacatt tcccagca tcccttgctg chr3:13933305-13933385 31 1.87e-05 aaactacatc tcccagca tcctttgcag chr19:5790610-5790690 47 1.87e-05 CCACCACATT TCCCAGCA CGCCTTTCGG chr22:22020238-22020318 15 1.87e-05 GAACCACAAT TCCCAGCA CGCCAGGCGC chr19:58838292-58838372 13 1.87e-05 CAACTACAAT TCCCAGCA GGCACCGCGC chr19:48848303-48848383 32 1.87e-05 GGACTACAAC TCCCAGCA GCCCATGCCT chr22:33300158-33300238 27 1.87e-05 ggactacatt tcccagca ggccttgtgg chr4:6374774-6374854 32 1.87e-05 ggactacatt tcccagca gcctttgtgc chr19:42772884-42772964 42 1.87e-05 AGACTACGGT TCCCAGCA GGAACTGCGA chr11:450201-450281 3 1.87e-05 CT TCCCAGCA AGCACTGCGT chr11:113644471-11364455 68 1.87e-05 GCACTACAAC TCCCAGCA GGCAC chr11:74109857-74109937 65 1.87e-05 AGACTACGAC TCCCAGCA GCTCCGCG chr19:49469192-49469272 12 1.87e-05 GGACTACATC TCCCAGCA GGCCGTGCGC chr1:22755259-22755339 27 1.87e-05 agactacatt tcccagca taccttgcag chr16:1625721-1625801 16 1.87e-05 CACTGGCCTC TCCCAGCA GGCCATTCAC chr4:8160676-8160756 49 1.87e-05 GGACTACAAG TCCCAGCA CGCTTCGCGG chr17:7591570-7591650 36 1.87e-05 AGACTACAAC TCCCAGCA GCCACGAGGA chr17:7123126-7123206 33 1.87e-05 GAACTACAGC TCCCAGCA TGCCCCGGGG chr19:19887272-19887352 53 1.87e-05 AGACTACAAC TCCCAGCA TACCAGGCGC chrX:149736803-149736883 72 1.87e-05 AAAATGGGCT TCCCAGCA G chr12:32832085-32832165 14 1.87e-05 GAACTACAAC TCCCAGCA GGCCTTGCTC chr19:45988713-45988793 10 1.87e-05 AACTACAAG TCCCAGCA GGCCCCGCGG chr17:40559666-40559746 27 1.87e-05 CAACTACACC TCCCAGCA GGCAAGGTGA chr2:86332685-86332765 7 1.87e-05 TACGGC TCCCAGCA GGACAAGCGC chr8:124054102-124054182 6 1.87e-05 ACAAA TCCCAGCA GGCACCGCGC chr19:49148181-49148261 11 1.87e-05 GAACTACAAC TCCCAGCA GGCCCCAGTG chr11:46134683-46134763 12 1.87e-05 CAACTACAGG TCCCAGCA TGCAGTGCTC chr19:48922670-48922750 12 1.87e-05 GAACTACATT TCCCAGCA GCCCCTGGAG chr19:507891-507971 2 1.87e-05 C TCCCAGCA TGCCGCGCGC chr19:55816992-55817072 11 1.87e-05 GAACTACAAG TCCCAGCA GCCCCTGGGG chr19:40697275-40697355 25 5.10e-05 AGACTACAAC TCCCAGGA GGCACCGCGG chrX:106362050-106362130 6 5.10e-05 TCAAG TCCCAGAA CTCCGCGCGG chr18:32923948-32924028 66 5.10e-05 CCATCACGAC TCCCAGAA CCCTCCG chr20:62694376-62694456 24 5.10e-05 GGACTACACT TCCCAGGA GGCTGTGCGC chr5:178286893-178286973 13 5.10e-05 GAACTACACT TCCCAGAA AGCCAGCGTC chr18:71815675-71815755 60 5.10e-05 AAACTACTAT TCCCAGGA AGACGGGGGT chr7:100888046-100888126 9 5.10e-05 ACTACAAC TCCCAGGA GCCTCTGCGG chr10:44144326-44144406 7 5.10e-05 TACAAC TCCCAGGA GTCTCCCCGC chr3:50397077-50397157 11 5.10e-05 GAACTACAAG TCCCAGGA GGCCATGAGC chr19:49223924-49224004 45 5.10e-05 GAACTACAAC TCCCAGAA AGCTTTGCGC chr2:239143008-239143088 22 5.10e-05 GAACTACATC TCCCAGGA GGCCCCGCGG chr2:54950547-54950627 59 5.10e-05 GGACTACACT TCCCAGGA TGCGTCGGGG chr14:59655260-59655340 36 5.10e-05 GGACCACTAC TCCCAGGA GTCTGCGCGC chr9:101172675-101172755 25 5.10e-05 aaactacatt tcccagaa tcgcctgcca chr19:44809204-44809284 57 5.10e-05 GGACTACAGT TCCCAGAA TGCTCCAAGG chr19:49479588-49479668 14 5.10e-05 GAACTCTAAC TCCCAGAA GCCTCTGGAC chr12:56710136-56710216 10 5.10e-05 AACTACATC TCCCAGGA AGCACCGCAG chr10:43048346-43048426 70 5.10e-05 AGACTACATT TCCCAGAA GTC chr3:61235784-61235864 30 5.10e-05 AGACTTCGTC TCCCAGGA GACATCTCGC chr2:217277090-217277170 8 5.10e-05 CTACAAA TCCCAGAA GACACTGCAG chr19:48866436-48866516 6 5.10e-05 ACAAC TCCCAGGA GGCGCCAGGG chr8:82755024-82755104 11 5.10e-05 AGACTACAAT TCCCAGAA GGAACTGCGA chr19:44331386-44331466 33 5.10e-05 GGACTACATT TCCCAGAA GTCTCCGGGG chr14:82000459-82000539 19 5.10e-05 AGACTACAAT TCCCAGAA TGCGCTTCAT chr13:52157976-52158056 19 5.10e-05 AAACTACGAC TCCCAGGA GGCCACTGGG chr19:49422142-49422222 39 5.10e-05 CAAAAACGGC TCCCAGGA GTGGTAGCGT chr17:7358816-7358896 9 5.10e-05 ACTACAGT TCCCAGAA GAGTGTGCGG chr6:10147340-10147420 47 5.10e-05 ggactacacc tcccagga tgcaatgcat chr19:54382695-54382775 69 5.10e-05 GGACTACCAG TCCCAGAA TGCA chr19:50651545-50651625 6 5.10e-05 ACATT TCCCAGAA ACCATTGAGG chr19:46027168-46027248 6 5.10e-05 ACAAA TCCCAGAA TACTCTGTTC chr19:49228254-49228334 6 5.10e-05 ACAAC TCCCAGGA AGCTTCAGGG chr19:54396434-54396514 1 5.10e-05 . TCCCAGAA GACCCTAGGA chr19:55831281-55831361 5 5.10e-05 CAAG TCCCAGGA GGGCCGGGCG chr11:114310072-11431015 3 6.31e-05 AG TCCCATCA TTCCCTTCGG chr11:65635650-65635730 9 6.31e-05 ACTATGAT TCCCATCA TCCCTCAGGG chr11:64376987-64377067 8 6.31e-05 CTGCAAT TCCCATCA GCCCCCAAAA chr12:133532881-13353296 15 9.14e-05 GAACTACATT TCCCAGCG TCCCGCTCGC chr17:38443829-38443909 27 9.14e-05 AGACTACGCC TCCCAGCG TGCTTTGCGG chr17:19912574-19912654 17 9.14e-05 GTACTACATC TCCCAGCG AGCCCCGCGC chr2:202316287-202316367 26 9.14e-05 AGAGCCACTC TCCCAGCG GCCTCCACGG chr19:49947068-49947148 3 9.14e-05 AG TCCCAGCG GCCTCTGAGC chr1:243418777-243418857 19 9.14e-05 GGACTACAGT TCCCAGCG GGCAGAGCGC chr9:99616821-99616901 56 1.12e-04 GGACTACATT TCCCATAA GCTCTTGCGT chr19:51152951-51153031 51 1.12e-04 GAACTACATT TCCCATGA GCCTCTGGGG chr19:55708324-55708404 12 1.12e-04 AAACTACAAC TCCCATGA GGCCTTGGGC chr13:30881224-30881304 57 1.12e-04 GAACTACAAT TCCCATGA TGCACCGCGA chr19:55690506-55690586 10 1.12e-04 AACTCCAAC TCCCATGA GGCCTTTGCG chr19:55709047-55709127 12 1.12e-04 AAACTACAGT TCCCATGA GGCTATGGAT chr19:54682359-54682439 11 1.12e-04 aaactacaat tcccatgA GCCTCCGGGG chr19:54480860-54480940 12 1.12e-04 AGACTACAAC TCCCATGA TCCACTGCGG chr17:77005881-77005961 5 1.53e-04 GCGT TCCCGGCA GCCTCTGCTC chr20:62289892-62289972 6 1.53e-04 ACAGC TCCCGGCA GGCCCCAAGC chr2:38893003-38893083 27 1.53e-04 AAACTACCAT TCCCAACA TGCAATGCAA chr1:151584366-151584446 6 1.53e-04 ACAAC TCCCGGCA GGCCTTGCTT chr17:7760558-7760638 23 1.53e-04 GAACCACAGC TCCCGGCA GCCCGCGGGG chr16:30103260-30103340 8 1.53e-04 CTACACT TCCCGGCA GGCTCAGCGC chr10:111985582-11198566 57 1.53e-04 GCACTACGAT TCCCGGCA GCCGCGGGCG chr1:224544447-224544527 54 1.53e-04 GGACTACAAC TCCCGGCA TGCCACACCA chr19:38397761-38397841 28 1.53e-04 CGCCTACGGC TCCCGGCA GCCCCCGCGC chr5:138775200-138775280 67 1.53e-04 GGACTACAAC TCCCGGCA GGCTCT chr17:7094935-7095015 15 1.53e-04 GGACTCCAAT TCCCAACA GCCCTAGAGG chr14:36295379-36295459 60 1.53e-04 GAACTACAAC TCCCGGCA AGCATCGGAA chr17:7118412-7118492 9 1.53e-04 ACCACAAC TCCCAACA GCGCCATGGG chr19:51142556-51142636 11 1.53e-04 AGACTACAAT TCCCGGCA GGTCTCGCGC chr22:30163037-30163117 4 2.29e-04 CCT TCCCAGAG AGCTTTGGGA chr19:38720430-38720510 51 2.29e-04 GGACTACACG TCCCAGGG GGCGTCAGGA chr8:103763436-103763516 22 2.29e-04 agactacatt tcccagcc tcccttgcag chr17:16439095-16439175 61 2.29e-04 CCGCCCAGTG TCCCAGAG TCCCTTTCGA chr19:36208412-36208492 17 2.29e-04 GAACTGCATT TCCCAGGG CCTCGGGGGT chr6:41703386-41703466 6 2.29e-04 CCGCC TCCCAGCC GCTCTGCCTC chr9:132031093-132031173 13 2.29e-04 agactacatt tcccagcc tcccctgcaa chr19:37569247-37569327 3 2.29e-04 TT TCCCAGAG GCACGGCGTC chr9:37920544-37920624 16 2.29e-04 ggactacatt tcccagcc tcccttgcag chr11:73661985-73662065 25 2.29e-04 GGACTACAAC TCCCAGAG TGCACCTGTG chr20:49084695-49084775 18 2.29e-04 agactacatt tcccagcc tcccttgcag chr12:88535977-88536057 16 2.29e-04 GGACTTCAAA TCCCAGAG TGCAGTTCTG chr13:41837968-41838048 19 2.29e-04 AAACTACAAC TCCCAGAG CGCCCACCAA chr9:133003022-133003102 12 2.29e-04 ggactacatt tcccagcc tcccttgtgg chr5:55008192-55008272 58 2.29e-04 GGACTACAAC TCCCAGAG GGCTCTGCGA chrX:134478609-134478689 3 2.29e-04 AG TCCCAGCC CCTCCCACGT chr6:44101522-44101602 11 2.29e-04 GGCATAGCTT TCCCAGCC TTCCCTGCTT chr6:52929627-52929707 11 2.29e-04 CGACTACAAA TCCCAGAG TGCCTCGCGG chr19:49416530-49416610 6 2.29e-04 ACAAT TCCCAGGG GCCCTTGAGG chr14:73493984-73494064 14 2.42e-04 TGACTACAAC TCCCAGTA CTGAAGAGGC chr19:49404460-49404540 17 2.42e-04 AAACTACATT TCCCAGTA GCACCATGTT chr19:55677451-55677531 2 2.42e-04 A TCCCAGTA GGCGTTCCGC chrX:106045780-106045860 61 3.12e-04 AAACTACAAC TCCCAAGA GGTAAAGAAG chr19:49250489-49250569 9 3.12e-04 ACTACAAC TCCCAAAA TGCCCTGGGG chr3:14361216-14361296 41 3.59e-04 ggactacatt tcccaggc tcctctgcag chr12:124594395-12459447 25 3.59e-04 aaactacatt tcccaggc tcccttgtgc chr19:4304529-4304609 37 3.59e-04 GAACTACATT TCCCAGGC GGCCGCGGCG chr6:14800257-14800337 28 3.59e-04 agactacatt tcccaggc tcccttgcag chr4:18023791-18023871 9 3.59e-04 ACTTCACT TCCCAGGC TCCATTTCGC chr3:50388506-50388586 31 4.05e-04 CTCCGCGCCC TCCCAGCT GGCTCTACTG chr16:30908469-30908549 13 4.05e-04 GGACTACATT CCCCAGCA CGCATCGGGC chr6:15245639-15245719 51 4.05e-04 GAATTGTAGT TCCCAGCT TCCGTGGCCA chr12:104323514-10432359 30 4.05e-04 AGACTACGAC CCCCAGCA TTCAATGCAG chr7:150689951-150690031 7 4.05e-04 TACAAA CCCCAGCA TGCACTCTGG chr1:205744611-205744691 5 4.05e-04 CATT TCCCAGCT TTCCTCGCGG chr19:49224354-49224434 8 4.05e-04 CTACAAA CCCCAGCA ACTCCTGGGG chr16:58664402-58664482 11 4.24e-04 TCTACCCCGT TCCCATCG CAGAAGTAAT chr14:77924022-77924102 44 5.03e-04 TGACTACAGC CCCCAGAA ACCCCAAGCA chr2:2617281-2617361 48 5.03e-04 aaactacaat ccccagga tgcactgcac chr3:127771058-127771138 55 5.03e-04 TCCCGACAGG CCCCAGGA GCCCCGCTGC chr13:41768698-41768778 10 5.03e-04 AACTACTGC TCCCAGGT TGCCTTTCGC chr20:25677511-25677591 30 5.90e-04 GGACTACGCT ACCCAGCA TCCTCGGCGC chr16:58426721-58426801 13 6.52e-04 AGACTGCAGC TCCCGGCG GGCCCCTCGG chr16:19535062-19535142 17 6.52e-04 AGACTACGTT TCCCGGCG TGCAGCGTGC chr1:47799895-47799975 4 6.52e-04 GAG Tcccggcg gccaccgcgc chr6:43215024-43215104 9 6.52e-04 ACTCCATC TCCCGGCG TGCCCTGCTC chr19:50030971-50031051 8 7.10e-04 ATACATT TCCCGTGA GGCGTTGTGA chr15:75182318-75182398 16 7.10e-04 GAACTACATT TCCCGTGA AGCTCTGGGC chr19:49013931-49014011 12 7.10e-04 GGACTACAAC TCCCGTGA TGCTCTGCGA chr16:29687603-29687683 52 7.93e-04 ttagtagggt acccagaa ggaaaaggga chr19:57946562-57946642 42 7.93e-04 GAACTACATT ACCCAGAA GACACTGCGG chr19:44598408-44598488 67 9.88e-04 GGCTGGCGGG TCCCGGGG AATTCT chr20:47805032-47805112 64 9.88e-04 CCGTCCTGAG TCCCGGGG CCTGCCGGG chr1:154979443-154979523 16 9.88e-04 GGACTACAAC TCCCAAGG TACATACAAA chr19:49486856-49486936 5 9.88e-04 CAAC CCCCATCA GCGCCTAGGG chr16:31106263-31106343 17 1.06e-03 GGAATCGCGG CCCCAGCG GCTGCCAGGC chr19:49385141-49385221 8 1.06e-03 CTACAAT TCCCAATA GGCTTTGCAA chr14:81408128-81408208 62 1.11e-03 AGGGAGAGAG TCCCGAAA AGGAACTGCA chr13:26827954-26828034 3 1.26e-03 GC TCCCATAT TCCCACCGTG chr15:40986886-40986966 65 1.26e-03 GGAGATGTAG TCCCGGGC CGACGCAT chr19:41571019-41571099 5 1.26e-03 catt tcccaagc tcccttgcag chr11:134123326-13412340 59 1.48e-03 GGACTACAAC CCCCAGGG TGCAGTGGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:132346481-132346561 1.9e-05 21_[+3]_51 chr3:13933305-13933385 1.9e-05 30_[+3]_42 chr19:5790610-5790690 1.9e-05 46_[+3]_26 chr22:22020238-22020318 1.9e-05 14_[+3]_58 chr19:58838292-58838372 1.9e-05 12_[+3]_60 chr19:48848303-48848383 1.9e-05 31_[+3]_41 chr22:33300158-33300238 1.9e-05 26_[+3]_46 chr4:6374774-6374854 1.9e-05 31_[+3]_41 chr19:42772884-42772964 1.9e-05 41_[+3]_31 chr11:450201-450281 1.9e-05 2_[+3]_70 chr11:113644471-11364455 1.9e-05 67_[+3]_5 chr11:74109857-74109937 1.9e-05 64_[+3]_8 chr19:49469192-49469272 1.9e-05 11_[+3]_61 chr1:22755259-22755339 1.9e-05 26_[+3]_46 chr16:1625721-1625801 1.9e-05 15_[+3]_57 chr4:8160676-8160756 1.9e-05 48_[+3]_24 chr17:7591570-7591650 1.9e-05 35_[+3]_37 chr17:7123126-7123206 1.9e-05 32_[+3]_40 chr19:19887272-19887352 1.9e-05 52_[+3]_20 chrX:149736803-149736883 1.9e-05 71_[+3]_1 chr12:32832085-32832165 1.9e-05 13_[+3]_59 chr19:45988713-45988793 1.9e-05 9_[+3]_63 chr17:40559666-40559746 1.9e-05 26_[+3]_46 chr2:86332685-86332765 1.9e-05 6_[+3]_66 chr8:124054102-124054182 1.9e-05 5_[+3]_67 chr19:49148181-49148261 1.9e-05 10_[+3]_62 chr11:46134683-46134763 1.9e-05 11_[+3]_61 chr19:48922670-48922750 1.9e-05 11_[+3]_61 chr19:507891-507971 1.9e-05 1_[+3]_71 chr19:55816992-55817072 1.9e-05 10_[+3]_62 chr19:40697275-40697355 5.1e-05 24_[+3]_48 chrX:106362050-106362130 5.1e-05 5_[+3]_67 chr18:32923948-32924028 5.1e-05 65_[+3]_7 chr20:62694376-62694456 5.1e-05 23_[+3]_49 chr5:178286893-178286973 5.1e-05 12_[+3]_60 chr18:71815675-71815755 5.1e-05 59_[+3]_13 chr7:100888046-100888126 5.1e-05 8_[+3]_64 chr10:44144326-44144406 5.1e-05 6_[+3]_66 chr3:50397077-50397157 5.1e-05 10_[+3]_62 chr19:49223924-49224004 5.1e-05 44_[+3]_28 chr2:239143008-239143088 5.1e-05 21_[+3]_51 chr2:54950547-54950627 5.1e-05 58_[+3]_14 chr14:59655260-59655340 5.1e-05 35_[+3]_37 chr9:101172675-101172755 5.1e-05 24_[+3]_48 chr19:44809204-44809284 5.1e-05 56_[+3]_16 chr19:49479588-49479668 5.1e-05 13_[+3]_59 chr12:56710136-56710216 5.1e-05 9_[+3]_63 chr10:43048346-43048426 5.1e-05 69_[+3]_3 chr3:61235784-61235864 5.1e-05 29_[+3]_43 chr2:217277090-217277170 5.1e-05 7_[+3]_65 chr19:48866436-48866516 5.1e-05 5_[+3]_67 chr8:82755024-82755104 5.1e-05 10_[+3]_62 chr19:44331386-44331466 5.1e-05 32_[+3]_40 chr14:82000459-82000539 5.1e-05 18_[+3]_54 chr13:52157976-52158056 5.1e-05 18_[+3]_54 chr19:49422142-49422222 5.1e-05 38_[+3]_34 chr17:7358816-7358896 5.1e-05 8_[+3]_64 chr6:10147340-10147420 5.1e-05 46_[+3]_26 chr19:54382695-54382775 5.1e-05 68_[+3]_4 chr19:50651545-50651625 5.1e-05 5_[+3]_67 chr19:46027168-46027248 5.1e-05 5_[+3]_67 chr19:49228254-49228334 5.1e-05 5_[+3]_67 chr19:54396434-54396514 5.1e-05 [+3]_72 chr19:55831281-55831361 5.1e-05 4_[+3]_68 chr11:114310072-11431015 6.3e-05 2_[+3]_70 chr11:65635650-65635730 6.3e-05 8_[+3]_64 chr11:64376987-64377067 6.3e-05 7_[+3]_65 chr12:133532881-13353296 9.1e-05 14_[+3]_58 chr17:38443829-38443909 9.1e-05 26_[+3]_46 chr17:19912574-19912654 9.1e-05 16_[+3]_56 chr2:202316287-202316367 9.1e-05 25_[+3]_47 chr19:49947068-49947148 9.1e-05 2_[+3]_70 chr1:243418777-243418857 9.1e-05 18_[+3]_54 chr9:99616821-99616901 0.00011 55_[+3]_17 chr19:51152951-51153031 0.00011 50_[+3]_22 chr19:55708324-55708404 0.00011 11_[+3]_61 chr13:30881224-30881304 0.00011 56_[+3]_16 chr19:55690506-55690586 0.00011 9_[+3]_63 chr19:55709047-55709127 0.00011 11_[+3]_61 chr19:54682359-54682439 0.00011 10_[+3]_62 chr19:54480860-54480940 0.00011 11_[+3]_61 chr17:77005881-77005961 0.00015 4_[+3]_68 chr20:62289892-62289972 0.00015 5_[+3]_67 chr2:38893003-38893083 0.00015 26_[+3]_46 chr1:151584366-151584446 0.00015 5_[+3]_67 chr17:7760558-7760638 0.00015 22_[+3]_50 chr16:30103260-30103340 0.00015 7_[+3]_65 chr10:111985582-11198566 0.00015 56_[+3]_16 chr1:224544447-224544527 0.00015 53_[+3]_19 chr19:38397761-38397841 0.00015 27_[+3]_45 chr5:138775200-138775280 0.00015 66_[+3]_6 chr17:7094935-7095015 0.00015 14_[+3]_58 chr14:36295379-36295459 0.00015 59_[+3]_13 chr17:7118412-7118492 0.00015 8_[+3]_64 chr19:51142556-51142636 0.00015 10_[+3]_62 chr22:30163037-30163117 0.00023 3_[+3]_69 chr19:38720430-38720510 0.00023 50_[+3]_22 chr8:103763436-103763516 0.00023 21_[+3]_51 chr17:16439095-16439175 0.00023 60_[+3]_12 chr19:36208412-36208492 0.00023 16_[+3]_56 chr6:41703386-41703466 0.00023 5_[+3]_67 chr9:132031093-132031173 0.00023 12_[+3]_60 chr19:37569247-37569327 0.00023 2_[+3]_70 chr9:37920544-37920624 0.00023 15_[+3]_57 chr11:73661985-73662065 0.00023 24_[+3]_48 chr20:49084695-49084775 0.00023 17_[+3]_55 chr12:88535977-88536057 0.00023 15_[+3]_57 chr13:41837968-41838048 0.00023 18_[+3]_54 chr9:133003022-133003102 0.00023 11_[+3]_61 chr5:55008192-55008272 0.00023 57_[+3]_15 chrX:134478609-134478689 0.00023 2_[+3]_70 chr6:44101522-44101602 0.00023 10_[+3]_62 chr6:52929627-52929707 0.00023 10_[+3]_62 chr19:49416530-49416610 0.00023 5_[+3]_67 chr14:73493984-73494064 0.00024 13_[+3]_59 chr19:49404460-49404540 0.00024 16_[+3]_56 chr19:55677451-55677531 0.00024 1_[+3]_71 chrX:106045780-106045860 0.00031 60_[+3]_12 chr19:49250489-49250569 0.00031 8_[+3]_64 chr3:14361216-14361296 0.00036 40_[+3]_32 chr12:124594395-12459447 0.00036 24_[+3]_48 chr19:4304529-4304609 0.00036 36_[+3]_36 chr6:14800257-14800337 0.00036 27_[+3]_45 chr4:18023791-18023871 0.00036 8_[+3]_64 chr3:50388506-50388586 0.00041 30_[+3]_42 chr16:30908469-30908549 0.00041 12_[+3]_60 chr6:15245639-15245719 0.00041 50_[+3]_22 chr12:104323514-10432359 0.00041 29_[+3]_43 chr7:150689951-150690031 0.00041 6_[+3]_66 chr1:205744611-205744691 0.00041 4_[+3]_68 chr19:49224354-49224434 0.00041 7_[+3]_65 chr16:58664402-58664482 0.00042 10_[+3]_62 chr14:77924022-77924102 0.0005 43_[+3]_29 chr2:2617281-2617361 0.0005 47_[+3]_25 chr3:127771058-127771138 0.0005 54_[+3]_18 chr13:41768698-41768778 0.0005 9_[+3]_63 chr20:25677511-25677591 0.00059 29_[+3]_43 chr16:58426721-58426801 0.00065 12_[+3]_60 chr16:19535062-19535142 0.00065 16_[+3]_56 chr1:47799895-47799975 0.00065 3_[+3]_69 chr6:43215024-43215104 0.00065 8_[+3]_64 chr19:50030971-50031051 0.00071 7_[+3]_65 chr15:75182318-75182398 0.00071 15_[+3]_57 chr19:49013931-49014011 0.00071 11_[+3]_61 chr16:29687603-29687683 0.00079 51_[+3]_21 chr19:57946562-57946642 0.00079 41_[+3]_31 chr19:44598408-44598488 0.00099 66_[+3]_6 chr20:47805032-47805112 0.00099 63_[+3]_9 chr1:154979443-154979523 0.00099 15_[+3]_57 chr19:49486856-49486936 0.00099 4_[+3]_68 chr16:31106263-31106343 0.0011 16_[+3]_56 chr19:49385141-49385221 0.0011 7_[+3]_65 chr14:81408128-81408208 0.0011 61_[+3]_11 chr13:26827954-26828034 0.0013 2_[+3]_70 chr15:40986886-40986966 0.0013 64_[+3]_8 chr19:41571019-41571099 0.0013 4_[+3]_68 chr11:134123326-13412340 0.0015 58_[+3]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCCAGSA width=8 seqs=157 chr9:132346481-132346561 ( 22) TCCCAGCA 1 chr3:13933305-13933385 ( 31) TCCCAGCA 1 chr19:5790610-5790690 ( 47) TCCCAGCA 1 chr22:22020238-22020318 ( 15) TCCCAGCA 1 chr19:58838292-58838372 ( 13) TCCCAGCA 1 chr19:48848303-48848383 ( 32) TCCCAGCA 1 chr22:33300158-33300238 ( 27) TCCCAGCA 1 chr4:6374774-6374854 ( 32) TCCCAGCA 1 chr19:42772884-42772964 ( 42) TCCCAGCA 1 chr11:450201-450281 ( 3) TCCCAGCA 1 chr11:113644471-11364455 ( 68) TCCCAGCA 1 chr11:74109857-74109937 ( 65) TCCCAGCA 1 chr19:49469192-49469272 ( 12) TCCCAGCA 1 chr1:22755259-22755339 ( 27) TCCCAGCA 1 chr16:1625721-1625801 ( 16) TCCCAGCA 1 chr4:8160676-8160756 ( 49) TCCCAGCA 1 chr17:7591570-7591650 ( 36) TCCCAGCA 1 chr17:7123126-7123206 ( 33) TCCCAGCA 1 chr19:19887272-19887352 ( 53) TCCCAGCA 1 chrX:149736803-149736883 ( 72) TCCCAGCA 1 chr12:32832085-32832165 ( 14) TCCCAGCA 1 chr19:45988713-45988793 ( 10) TCCCAGCA 1 chr17:40559666-40559746 ( 27) TCCCAGCA 1 chr2:86332685-86332765 ( 7) TCCCAGCA 1 chr8:124054102-124054182 ( 6) TCCCAGCA 1 chr19:49148181-49148261 ( 11) TCCCAGCA 1 chr11:46134683-46134763 ( 12) TCCCAGCA 1 chr19:48922670-48922750 ( 12) TCCCAGCA 1 chr19:507891-507971 ( 2) TCCCAGCA 1 chr19:55816992-55817072 ( 11) TCCCAGCA 1 chr19:40697275-40697355 ( 25) TCCCAGGA 1 chrX:106362050-106362130 ( 6) TCCCAGAA 1 chr18:32923948-32924028 ( 66) TCCCAGAA 1 chr20:62694376-62694456 ( 24) TCCCAGGA 1 chr5:178286893-178286973 ( 13) TCCCAGAA 1 chr18:71815675-71815755 ( 60) TCCCAGGA 1 chr7:100888046-100888126 ( 9) TCCCAGGA 1 chr10:44144326-44144406 ( 7) TCCCAGGA 1 chr3:50397077-50397157 ( 11) TCCCAGGA 1 chr19:49223924-49224004 ( 45) TCCCAGAA 1 chr2:239143008-239143088 ( 22) TCCCAGGA 1 chr2:54950547-54950627 ( 59) TCCCAGGA 1 chr14:59655260-59655340 ( 36) TCCCAGGA 1 chr9:101172675-101172755 ( 25) TCCCAGAA 1 chr19:44809204-44809284 ( 57) TCCCAGAA 1 chr19:49479588-49479668 ( 14) TCCCAGAA 1 chr12:56710136-56710216 ( 10) TCCCAGGA 1 chr10:43048346-43048426 ( 70) TCCCAGAA 1 chr3:61235784-61235864 ( 30) TCCCAGGA 1 chr2:217277090-217277170 ( 8) TCCCAGAA 1 chr19:48866436-48866516 ( 6) TCCCAGGA 1 chr8:82755024-82755104 ( 11) TCCCAGAA 1 chr19:44331386-44331466 ( 33) TCCCAGAA 1 chr14:82000459-82000539 ( 19) TCCCAGAA 1 chr13:52157976-52158056 ( 19) TCCCAGGA 1 chr19:49422142-49422222 ( 39) TCCCAGGA 1 chr17:7358816-7358896 ( 9) TCCCAGAA 1 chr6:10147340-10147420 ( 47) TCCCAGGA 1 chr19:54382695-54382775 ( 69) TCCCAGAA 1 chr19:50651545-50651625 ( 6) TCCCAGAA 1 chr19:46027168-46027248 ( 6) TCCCAGAA 1 chr19:49228254-49228334 ( 6) TCCCAGGA 1 chr19:54396434-54396514 ( 1) TCCCAGAA 1 chr19:55831281-55831361 ( 5) TCCCAGGA 1 chr11:114310072-11431015 ( 3) TCCCATCA 1 chr11:65635650-65635730 ( 9) TCCCATCA 1 chr11:64376987-64377067 ( 8) TCCCATCA 1 chr12:133532881-13353296 ( 15) TCCCAGCG 1 chr17:38443829-38443909 ( 27) TCCCAGCG 1 chr17:19912574-19912654 ( 17) TCCCAGCG 1 chr2:202316287-202316367 ( 26) TCCCAGCG 1 chr19:49947068-49947148 ( 3) TCCCAGCG 1 chr1:243418777-243418857 ( 19) TCCCAGCG 1 chr9:99616821-99616901 ( 56) TCCCATAA 1 chr19:51152951-51153031 ( 51) TCCCATGA 1 chr19:55708324-55708404 ( 12) TCCCATGA 1 chr13:30881224-30881304 ( 57) TCCCATGA 1 chr19:55690506-55690586 ( 10) TCCCATGA 1 chr19:55709047-55709127 ( 12) TCCCATGA 1 chr19:54682359-54682439 ( 11) TCCCATGA 1 chr19:54480860-54480940 ( 12) TCCCATGA 1 chr17:77005881-77005961 ( 5) TCCCGGCA 1 chr20:62289892-62289972 ( 6) TCCCGGCA 1 chr2:38893003-38893083 ( 27) TCCCAACA 1 chr1:151584366-151584446 ( 6) TCCCGGCA 1 chr17:7760558-7760638 ( 23) TCCCGGCA 1 chr16:30103260-30103340 ( 8) TCCCGGCA 1 chr10:111985582-11198566 ( 57) TCCCGGCA 1 chr1:224544447-224544527 ( 54) TCCCGGCA 1 chr19:38397761-38397841 ( 28) TCCCGGCA 1 chr5:138775200-138775280 ( 67) TCCCGGCA 1 chr17:7094935-7095015 ( 15) TCCCAACA 1 chr14:36295379-36295459 ( 60) TCCCGGCA 1 chr17:7118412-7118492 ( 9) TCCCAACA 1 chr19:51142556-51142636 ( 11) TCCCGGCA 1 chr22:30163037-30163117 ( 4) TCCCAGAG 1 chr19:38720430-38720510 ( 51) TCCCAGGG 1 chr8:103763436-103763516 ( 22) TCCCAGCC 1 chr17:16439095-16439175 ( 61) TCCCAGAG 1 chr19:36208412-36208492 ( 17) TCCCAGGG 1 chr6:41703386-41703466 ( 6) TCCCAGCC 1 chr9:132031093-132031173 ( 13) TCCCAGCC 1 chr19:37569247-37569327 ( 3) TCCCAGAG 1 chr9:37920544-37920624 ( 16) TCCCAGCC 1 chr11:73661985-73662065 ( 25) TCCCAGAG 1 chr20:49084695-49084775 ( 18) TCCCAGCC 1 chr12:88535977-88536057 ( 16) TCCCAGAG 1 chr13:41837968-41838048 ( 19) TCCCAGAG 1 chr9:133003022-133003102 ( 12) TCCCAGCC 1 chr5:55008192-55008272 ( 58) TCCCAGAG 1 chrX:134478609-134478689 ( 3) TCCCAGCC 1 chr6:44101522-44101602 ( 11) TCCCAGCC 1 chr6:52929627-52929707 ( 11) TCCCAGAG 1 chr19:49416530-49416610 ( 6) TCCCAGGG 1 chr14:73493984-73494064 ( 14) TCCCAGTA 1 chr19:49404460-49404540 ( 17) TCCCAGTA 1 chr19:55677451-55677531 ( 2) TCCCAGTA 1 chrX:106045780-106045860 ( 61) TCCCAAGA 1 chr19:49250489-49250569 ( 9) TCCCAAAA 1 chr3:14361216-14361296 ( 41) TCCCAGGC 1 chr12:124594395-12459447 ( 25) TCCCAGGC 1 chr19:4304529-4304609 ( 37) TCCCAGGC 1 chr6:14800257-14800337 ( 28) TCCCAGGC 1 chr4:18023791-18023871 ( 9) TCCCAGGC 1 chr3:50388506-50388586 ( 31) TCCCAGCT 1 chr16:30908469-30908549 ( 13) CCCCAGCA 1 chr6:15245639-15245719 ( 51) TCCCAGCT 1 chr12:104323514-10432359 ( 30) CCCCAGCA 1 chr7:150689951-150690031 ( 7) CCCCAGCA 1 chr1:205744611-205744691 ( 5) TCCCAGCT 1 chr19:49224354-49224434 ( 8) CCCCAGCA 1 chr16:58664402-58664482 ( 11) TCCCATCG 1 chr14:77924022-77924102 ( 44) CCCCAGAA 1 chr2:2617281-2617361 ( 48) CCCCAGGA 1 chr3:127771058-127771138 ( 55) CCCCAGGA 1 chr13:41768698-41768778 ( 10) TCCCAGGT 1 chr20:25677511-25677591 ( 30) ACCCAGCA 1 chr16:58426721-58426801 ( 13) TCCCGGCG 1 chr16:19535062-19535142 ( 17) TCCCGGCG 1 chr1:47799895-47799975 ( 4) TCCCGGCG 1 chr6:43215024-43215104 ( 9) TCCCGGCG 1 chr19:50030971-50031051 ( 8) TCCCGTGA 1 chr15:75182318-75182398 ( 16) TCCCGTGA 1 chr19:49013931-49014011 ( 12) TCCCGTGA 1 chr16:29687603-29687683 ( 52) ACCCAGAA 1 chr19:57946562-57946642 ( 42) ACCCAGAA 1 chr19:44598408-44598488 ( 67) TCCCGGGG 1 chr20:47805032-47805112 ( 64) TCCCGGGG 1 chr1:154979443-154979523 ( 16) TCCCAAGG 1 chr19:49486856-49486936 ( 5) CCCCATCA 1 chr16:31106263-31106343 ( 17) CCCCAGCG 1 chr19:49385141-49385221 ( 8) TCCCAATA 1 chr14:81408128-81408208 ( 62) TCCCGAAA 1 chr13:26827954-26828034 ( 3) TCCCATAT 1 chr15:40986886-40986966 ( 65) TCCCGGGC 1 chr19:41571019-41571099 ( 5) TCCCAAGC 1 chr11:134123326-13412340 ( 59) CCCCAGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.78099 E= 1.9e-128 -340 -221 -1394 221 -1394 176 -1394 -1394 -1394 176 -1394 -1394 -1394 176 -1394 -1394 209 -1394 -112 -1394 -182 -1394 145 -87 1 72 -9 -295 179 -163 -83 -263 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 157 E= 1.9e-128 0.019108 0.063694 0.000000 0.917197 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.859873 0.000000 0.140127 0.000000 0.057325 0.000000 0.834395 0.108280 0.203822 0.484076 0.286624 0.025478 0.700637 0.095541 0.171975 0.031847 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 regular expression -------------------------------------------------------------------------------- TCCCAG[CGA]A -------------------------------------------------------------------------------- Time 11.57 secs. ******************************************************************************** ******************************************************************************** MOTIF GTAGTYYH MEME-4 width = 8 sites = 73 llr = 646 E-value = 2.6e-061 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::a::::2 pos.-specific C :::::562 probability G a::a:::1 matrix T :a::a544 bits 2.3 ** * 2.1 ** * 1.9 ** * 1.6 ***** Relative 1.4 ***** Entropy 1.2 ****** (12.8 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel GTAGTTCT consensus CTC sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:58426721-58426801 72 5.76e-06 TTTGGGATTT GTAGTTTT C chr4:79575018-79575098 47 5.76e-06 actaggaaat gtagtttt tgtcttgaga chr1:154842891-154842971 57 5.76e-06 ACTGGGAACT GTAGTTTT TGCTCCCCCA chr18:56806971-56807051 13 5.76e-06 TCTGGGAGTG GTAGTTTT CTTCCTTCAG chr4:7075460-7075540 71 5.76e-06 gctgggaaat gtagtttt ta chr19:10828075-10828155 38 5.76e-06 TCTGGGACTT GTAGTTTT CCCCAGTGCC chr3:69788455-69788535 21 5.76e-06 TCTGGGAGCT GTAGTTTT CGTGGGAGCG chr6:41703386-41703466 41 1.43e-05 ACTGGGAAGC GTAGTTCT CGCTGCAGTC chr1:155990743-155990823 58 1.43e-05 TGTGGGAGTT GTAGTTCT TGGAGAAGCC chr3:50397077-50397157 73 1.43e-05 GCTGGGAGTT GTAGTTCT chr11:74109857-74109937 13 1.43e-05 CACGGGAGTT GTAGTTCT TTCCTTTGTC chr19:42463547-42463627 23 1.43e-05 GCTGGGGACT GTAGTTCT GCCGCCGAGT chr19:49947068-49947148 71 1.43e-05 GCTGGGAGAT GTAGTTCT CT chr19:19887272-19887352 1 1.43e-05 . GTAGTTCT GAAGCTACCT chr1:234812114-234812194 41 1.43e-05 gctgggggtt gtagttct cgtgtactcc chr6:31866312-31866392 34 1.43e-05 TCTGGGAACT GTAGTTCT CTTTGGTTAA chr19:49486856-49486936 73 1.43e-05 TCTGGGAGTT GTAGTTCT chr1:156308545-156308625 31 2.29e-05 AGTGGGAGTT GTAGTCTT ACCGGGCCGG chr10:71754207-71754287 63 2.29e-05 gctgggaaat gtagtctt taaccactaa chr11:36355674-36355754 64 2.29e-05 gctgggaaat gtagtctt tatcctgga chr10:72288710-72288790 57 2.29e-05 gctgggaaat gtagtctt cagctgggtg chr16:33569517-33569597 64 2.29e-05 gctgggaaat gtagtctt tcttctttg chr10:103892652-10389273 72 2.29e-05 TCTGGGATTC GTAGTCTT G chr6:5003901-5003981 21 4.16e-05 CCTGGGAGTT GTAGTCCT GTAGCCCTGC chr19:58838292-58838372 68 4.16e-05 GCCGGGAATT GTAGTCCT GGCGG chrX:70315604-70315684 25 4.16e-05 GACGGGAGAT GTAGTCCT CAAGAGTGAC chr13:41837968-41838048 52 4.16e-05 CCTGGGAGTT GTAGTTTA CCTTGCGGCA chr16:30939332-30939412 4 4.16e-05 GCT GTAGTCCT GGCTGGTTCT chr16:29687603-29687683 37 4.16e-05 gctgggaaat gtagttta gtagggtacc chr1:154979443-154979523 59 4.16e-05 ACTGGGAGTT GTAGTCCT TGAGCTCTCA chr19:38270225-38270305 29 4.16e-05 TCTGGGAAAT GTAGTTTA AGCCTAAAGC chr22:41840447-41840527 33 4.16e-05 TCTGGGAATT GTAGTCCT CAAACACCTC chr13:31736510-31736590 37 4.16e-05 GCTGGGATGT GTAGTCCT GGCCGCAGTG chr19:49017220-49017300 67 4.16e-05 TGTAGGAAAT GTAGTCCT GCTCGA chr20:21077058-21077138 71 5.03e-05 gctgggaaat gtagttca gc chr19:37861891-37861971 25 5.03e-05 TCTGGGAGAT GTAGTTCA ACGATGACGG chr3:98241881-98241961 68 5.03e-05 TGTGGGAGAT GTAGTTCA GCTCC chr2:18741926-18742006 57 5.89e-05 GCTGGGACTT GTAGTTTC CCTCTGGGGG chr2:202316287-202316367 70 5.89e-05 GCTGGGAATT GTAGTTTC CTG chr9:15422705-15422785 44 5.89e-05 GCCGGGAAAT GTAGTTTC TGATGCCCTg chr4:104021022-104021102 26 5.89e-05 GCTGGGATTT GTAGTTTC CCTGCTTTCA chr6:157801084-157801164 29 5.89e-05 GCAGGGACTT GTAGTTTC TAAGGCCCCG chr9:72435537-72435617 70 5.89e-05 TCTGGGAAAT GTAGTTTC TTA chr9:97021491-97021571 69 7.17e-05 TCTGGGTAGT GTAGTTCC GTGC chr4:174291898-174291978 10 7.17e-05 CTAGGATTA GTAGTTCC TCCGTCCCTC chr16:31045641-31045721 61 7.17e-05 TGTGGGGGTT GTAGTTCC ACGCAGGTGG chr19:41084530-41084610 32 7.17e-05 AGTGGGAGGT GTAGTTCC CTATCAGATG chr11:64387388-64387468 29 7.17e-05 GATGGGAGTT GTAGTTCC TAAGCCATGT chr5:178157709-178157789 72 7.17e-05 TCGGGGAAGT GTAGTTCC A chr20:48732486-48732566 33 8.04e-05 GCTGGTTGTT GTAGTCTA GCGTTGGCGC chr19:44598408-44598488 16 9.34e-05 TCTGGGAAGT GTAGTCCA GACGCTCAGT chr19:37178350-37178430 49 9.34e-05 TGTGGGAAAT GTAGTCCA AGGCCGGAAA chr18:60382257-60382337 28 9.34e-05 GCTGGGACTT GTAGTCCA CCATGTTTCC chr19:36208412-36208492 68 9.34e-05 CCTGGGAGTG GTAGTCCA CGCGG chr11:125773086-12577316 67 9.34e-05 CATGGGAGGT GTAGTCCA AGTTTG chr16:15150015-15150095 30 9.34e-05 CACGGGAAAT GTAGTCCA AAGCCAGGAA chr19:4066018-4066098 33 9.34e-05 CCTGGGACTT GTAGTCCA AGCCGCTTGC chr14:81408128-81408208 16 9.34e-05 TCTGGGAGTT GTAGTCCA TCTCGGCCTC chr5:138775200-138775280 25 9.34e-05 GCTGGTCATT GTAGTCCA GTCCATATGA chr14:82000459-82000539 68 9.34e-05 CTTGGGAAAC GTAGTCCA TCGTA chr18:77439402-77439482 42 1.06e-04 GCCGGAACTC GTAGTCTC GGGATGCTGG chr19:48907016-48907096 22 1.06e-04 GCTGGGAGAT GTAGTCTC CTCACTGCCT chr6:43215024-43215104 68 1.06e-04 GCTGGGAGTT GTAGTCTC AGCCT chr17:40559666-40559746 71 1.06e-04 GCTGGGACTT GTAGTCTC TA chr2:23598481-23598561 36 1.06e-04 GCTGGGAGAT GTAGTctc actccaaagg chrX:106045780-106045860 7 1.25e-04 GGAAGG GTAGTCCC ATGTTCCAGT chr11:66138873-66138953 66 1.47e-04 GATGGGAATT GTAGTTCG ATCCGGT chr16:46918118-46918198 34 1.47e-04 TGTGGGACTT GTAGTTCG CGTCACTCTC chr2:241525730-241525810 70 1.61e-04 GCTGGGAGCT GTAGTCTG CGA chr10:38383154-38383234 24 1.61e-04 TGTGGGAAAT GTAGTCTG CACTTTCTAA chr1:47799895-47799975 73 1.80e-04 GCCGGGACTT GTAGTCCG chr21:15755524-15755604 8 1.80e-04 GGGAAAT GTAGTCCG CTTGCTCTGA chr19:7616337-7616417 22 1.80e-04 GCTGGGAGAT GTAGTCCG GCGTCCAGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:58426721-58426801 5.8e-06 71_[+4]_1 chr4:79575018-79575098 5.8e-06 46_[+4]_26 chr1:154842891-154842971 5.8e-06 56_[+4]_16 chr18:56806971-56807051 5.8e-06 12_[+4]_60 chr4:7075460-7075540 5.8e-06 70_[+4]_2 chr19:10828075-10828155 5.8e-06 37_[+4]_35 chr3:69788455-69788535 5.8e-06 20_[+4]_52 chr6:41703386-41703466 1.4e-05 40_[+4]_32 chr1:155990743-155990823 1.4e-05 57_[+4]_15 chr3:50397077-50397157 1.4e-05 72_[+4] chr11:74109857-74109937 1.4e-05 12_[+4]_60 chr19:42463547-42463627 1.4e-05 22_[+4]_50 chr19:49947068-49947148 1.4e-05 70_[+4]_2 chr19:19887272-19887352 1.4e-05 [+4]_72 chr1:234812114-234812194 1.4e-05 40_[+4]_32 chr6:31866312-31866392 1.4e-05 33_[+4]_39 chr19:49486856-49486936 1.4e-05 72_[+4] chr1:156308545-156308625 2.3e-05 30_[+4]_42 chr10:71754207-71754287 2.3e-05 62_[+4]_10 chr11:36355674-36355754 2.3e-05 63_[+4]_9 chr10:72288710-72288790 2.3e-05 56_[+4]_16 chr16:33569517-33569597 2.3e-05 63_[+4]_9 chr10:103892652-10389273 2.3e-05 71_[+4]_1 chr6:5003901-5003981 4.2e-05 20_[+4]_52 chr19:58838292-58838372 4.2e-05 67_[+4]_5 chrX:70315604-70315684 4.2e-05 24_[+4]_48 chr13:41837968-41838048 4.2e-05 51_[+4]_21 chr16:30939332-30939412 4.2e-05 3_[+4]_69 chr16:29687603-29687683 4.2e-05 36_[+4]_36 chr1:154979443-154979523 4.2e-05 58_[+4]_14 chr19:38270225-38270305 4.2e-05 28_[+4]_44 chr22:41840447-41840527 4.2e-05 32_[+4]_40 chr13:31736510-31736590 4.2e-05 36_[+4]_36 chr19:49017220-49017300 4.2e-05 66_[+4]_6 chr20:21077058-21077138 5e-05 70_[+4]_2 chr19:37861891-37861971 5e-05 24_[+4]_48 chr3:98241881-98241961 5e-05 67_[+4]_5 chr2:18741926-18742006 5.9e-05 56_[+4]_16 chr2:202316287-202316367 5.9e-05 69_[+4]_3 chr9:15422705-15422785 5.9e-05 43_[+4]_29 chr4:104021022-104021102 5.9e-05 25_[+4]_47 chr6:157801084-157801164 5.9e-05 28_[+4]_44 chr9:72435537-72435617 5.9e-05 69_[+4]_3 chr9:97021491-97021571 7.2e-05 68_[+4]_4 chr4:174291898-174291978 7.2e-05 9_[+4]_63 chr16:31045641-31045721 7.2e-05 60_[+4]_12 chr19:41084530-41084610 7.2e-05 31_[+4]_41 chr11:64387388-64387468 7.2e-05 28_[+4]_44 chr5:178157709-178157789 7.2e-05 71_[+4]_1 chr20:48732486-48732566 8e-05 32_[+4]_40 chr19:44598408-44598488 9.3e-05 15_[+4]_57 chr19:37178350-37178430 9.3e-05 48_[+4]_24 chr18:60382257-60382337 9.3e-05 27_[+4]_45 chr19:36208412-36208492 9.3e-05 67_[+4]_5 chr11:125773086-12577316 9.3e-05 66_[+4]_6 chr16:15150015-15150095 9.3e-05 29_[+4]_43 chr19:4066018-4066098 9.3e-05 32_[+4]_40 chr14:81408128-81408208 9.3e-05 15_[+4]_57 chr5:138775200-138775280 9.3e-05 24_[+4]_48 chr14:82000459-82000539 9.3e-05 67_[+4]_5 chr18:77439402-77439482 0.00011 41_[+4]_31 chr19:48907016-48907096 0.00011 21_[+4]_51 chr6:43215024-43215104 0.00011 67_[+4]_5 chr17:40559666-40559746 0.00011 70_[+4]_2 chr2:23598481-23598561 0.00011 35_[+4]_37 chrX:106045780-106045860 0.00013 6_[+4]_66 chr11:66138873-66138953 0.00015 65_[+4]_7 chr16:46918118-46918198 0.00015 33_[+4]_39 chr2:241525730-241525810 0.00016 69_[+4]_3 chr10:38383154-38383234 0.00016 23_[+4]_49 chr1:47799895-47799975 0.00018 72_[+4] chr21:15755524-15755604 0.00018 7_[+4]_65 chr19:7616337-7616417 0.00018 21_[+4]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTAGTYYH width=8 seqs=73 chr16:58426721-58426801 ( 72) GTAGTTTT 1 chr4:79575018-79575098 ( 47) GTAGTTTT 1 chr1:154842891-154842971 ( 57) GTAGTTTT 1 chr18:56806971-56807051 ( 13) GTAGTTTT 1 chr4:7075460-7075540 ( 71) GTAGTTTT 1 chr19:10828075-10828155 ( 38) GTAGTTTT 1 chr3:69788455-69788535 ( 21) GTAGTTTT 1 chr6:41703386-41703466 ( 41) GTAGTTCT 1 chr1:155990743-155990823 ( 58) GTAGTTCT 1 chr3:50397077-50397157 ( 73) GTAGTTCT 1 chr11:74109857-74109937 ( 13) GTAGTTCT 1 chr19:42463547-42463627 ( 23) GTAGTTCT 1 chr19:49947068-49947148 ( 71) GTAGTTCT 1 chr19:19887272-19887352 ( 1) GTAGTTCT 1 chr1:234812114-234812194 ( 41) GTAGTTCT 1 chr6:31866312-31866392 ( 34) GTAGTTCT 1 chr19:49486856-49486936 ( 73) GTAGTTCT 1 chr1:156308545-156308625 ( 31) GTAGTCTT 1 chr10:71754207-71754287 ( 63) GTAGTCTT 1 chr11:36355674-36355754 ( 64) GTAGTCTT 1 chr10:72288710-72288790 ( 57) GTAGTCTT 1 chr16:33569517-33569597 ( 64) GTAGTCTT 1 chr10:103892652-10389273 ( 72) GTAGTCTT 1 chr6:5003901-5003981 ( 21) GTAGTCCT 1 chr19:58838292-58838372 ( 68) GTAGTCCT 1 chrX:70315604-70315684 ( 25) GTAGTCCT 1 chr13:41837968-41838048 ( 52) GTAGTTTA 1 chr16:30939332-30939412 ( 4) GTAGTCCT 1 chr16:29687603-29687683 ( 37) GTAGTTTA 1 chr1:154979443-154979523 ( 59) GTAGTCCT 1 chr19:38270225-38270305 ( 29) GTAGTTTA 1 chr22:41840447-41840527 ( 33) GTAGTCCT 1 chr13:31736510-31736590 ( 37) GTAGTCCT 1 chr19:49017220-49017300 ( 67) GTAGTCCT 1 chr20:21077058-21077138 ( 71) GTAGTTCA 1 chr19:37861891-37861971 ( 25) GTAGTTCA 1 chr3:98241881-98241961 ( 68) GTAGTTCA 1 chr2:18741926-18742006 ( 57) GTAGTTTC 1 chr2:202316287-202316367 ( 70) GTAGTTTC 1 chr9:15422705-15422785 ( 44) GTAGTTTC 1 chr4:104021022-104021102 ( 26) GTAGTTTC 1 chr6:157801084-157801164 ( 29) GTAGTTTC 1 chr9:72435537-72435617 ( 70) GTAGTTTC 1 chr9:97021491-97021571 ( 69) GTAGTTCC 1 chr4:174291898-174291978 ( 10) GTAGTTCC 1 chr16:31045641-31045721 ( 61) GTAGTTCC 1 chr19:41084530-41084610 ( 32) GTAGTTCC 1 chr11:64387388-64387468 ( 29) GTAGTTCC 1 chr5:178157709-178157789 ( 72) GTAGTTCC 1 chr20:48732486-48732566 ( 33) GTAGTCTA 1 chr19:44598408-44598488 ( 16) GTAGTCCA 1 chr19:37178350-37178430 ( 49) GTAGTCCA 1 chr18:60382257-60382337 ( 28) GTAGTCCA 1 chr19:36208412-36208492 ( 68) GTAGTCCA 1 chr11:125773086-12577316 ( 67) GTAGTCCA 1 chr16:15150015-15150095 ( 30) GTAGTCCA 1 chr19:4066018-4066098 ( 33) GTAGTCCA 1 chr14:81408128-81408208 ( 16) GTAGTCCA 1 chr5:138775200-138775280 ( 25) GTAGTCCA 1 chr14:82000459-82000539 ( 68) GTAGTCCA 1 chr18:77439402-77439482 ( 42) GTAGTCTC 1 chr19:48907016-48907096 ( 22) GTAGTCTC 1 chr6:43215024-43215104 ( 68) GTAGTCTC 1 chr17:40559666-40559746 ( 71) GTAGTCTC 1 chr2:23598481-23598561 ( 36) GTAGTCTC 1 chrX:106045780-106045860 ( 7) GTAGTCCC 1 chr11:66138873-66138953 ( 66) GTAGTTCG 1 chr16:46918118-46918198 ( 34) GTAGTTCG 1 chr2:241525730-241525810 ( 70) GTAGTCTG 1 chr10:38383154-38383234 ( 24) GTAGTCTG 1 chr1:47799895-47799975 ( 73) GTAGTCCG 1 chr21:15755524-15755604 ( 8) GTAGTCCG 1 chr19:7616337-7616417 ( 22) GTAGTCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.76163 E= 2.6e-061 -1283 -1283 171 -1283 -1283 -1283 -1283 234 231 -1283 -1283 -1283 -1283 -1283 171 -1283 -1283 -1283 -1283 234 -1283 74 -1283 136 -1283 100 -1283 106 21 -26 -167 110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 73 E= 2.6e-061 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.493151 0.000000 0.506849 0.000000 0.589041 0.000000 0.410959 0.232877 0.246575 0.095890 0.424658 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYH MEME-4 regular expression -------------------------------------------------------------------------------- GTAGT[TC][CT][TCA] -------------------------------------------------------------------------------- Time 14.71 secs. ******************************************************************************** ******************************************************************************** MOTIF SWGCATGC MEME-5 width = 8 sites = 27 llr = 234 E-value = 9.3e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 14::a::: pos.-specific C 5::a:::a probability G 3:a:::8: matrix T 16:::a2: bits 2.3 ** 2.1 ** 1.9 *** * 1.6 **** * Relative 1.4 ***** * Entropy 1.2 ******* (12.5 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel CTGCATGC consensus GA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:127771058-127771138 69 1.90e-05 AGGAGCCCCG CTGCATGC CGGG chr12:88535977-88536057 44 1.90e-05 CCTGAGGCTT CTGCATGC TGGGAACTGA chr19:5790610-5790690 11 3.85e-05 CTACAATTCC CAGCATGC CTTGAAGCGG chr10:92631672-92631752 3 3.85e-05 CC CAGCATGC CTGAGGGGCG chr2:2617281-2617361 3 3.85e-05 CC CAGCATGC ACTGCGACCG chr11:450201-450281 49 3.85e-05 CCACAAGGCC CAGCATGC CCCGCGCGGA chr1:224544447-224544527 2 3.85e-05 C CAGCATGC GTCAGAATTA chr12:110151321-11015140 52 3.85e-05 CGCCGGCGCG CAGCATGC CGGGAGTTGC chr19:55815805-55815885 8 3.85e-05 CAAGTTG CAGCATGC ACCGGGCCAG chr1:10706555-10706635 2 3.85e-05 C CAGCATGC ATTCCTGCCT chr2:241525730-241525810 35 5.82e-05 CGGGAGGAAG GTGCATGC TGGGAGCGGC chr18:77439402-77439482 26 5.82e-05 GCGGCTCGCG GTGCATGC CGGAACTCGT chr16:58664402-58664482 64 5.82e-05 AGAAGGAGCA GTGCATGC TGGGGGTTG chr1:234812114-234812194 25 5.82e-05 actgaccgca gtgcatgc tgggggttgt chr20:21077058-21077138 6 7.10e-05 tctac ttgcatgc cactggcgaa chr12:104323514-10432359 63 7.10e-05 CCCTAGGACG TTGCATGC CGGGAGCTGT chr19:48907016-48907096 6 7.10e-05 CCTCA TTGCATGC TGGGAGATGT chr13:31736510-31736590 21 7.10e-05 AGTGTGCGCC TTGCATGC TGGGATGTGT chr5:74807658-74807738 6 9.63e-05 CTGTG CTGCATTC TGGGAAGGGC chr15:40986886-40986966 45 9.63e-05 CCCGCCGGCG ATGCATGC CGGGAGATGT chr7:150689951-150690031 59 9.63e-05 TGTACCCCAC CTGCATTC TGGGAACTGT chr4:104021022-104021102 10 9.63e-05 CGCTTAATA ATGCATGC TGGGATTTGT chr5:178157709-178157789 56 9.63e-05 GAGAGGACAC CTGCATTC GGGGAAGTGT chr19:7616337-7616417 37 1.16e-04 CCGGCGTCCA GAGCATGC TGGGAGGGAA chr2:39005285-39005365 48 1.55e-04 GATCGGCGCA AAGCATGC TGGTCTCAGG chr13:26827954-26828034 61 1.68e-04 GCGGCGGCCT GTGCATTC TGGGTATTGT chr2:27319252-27319332 50 1.68e-04 GGCGCTCTCA GTGCATTC TGGGAGATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:127771058-127771138 1.9e-05 68_[+5]_4 chr12:88535977-88536057 1.9e-05 43_[+5]_29 chr19:5790610-5790690 3.8e-05 10_[+5]_62 chr10:92631672-92631752 3.8e-05 2_[+5]_70 chr2:2617281-2617361 3.8e-05 2_[+5]_70 chr11:450201-450281 3.8e-05 48_[+5]_24 chr1:224544447-224544527 3.8e-05 1_[+5]_71 chr12:110151321-11015140 3.8e-05 51_[+5]_21 chr19:55815805-55815885 3.8e-05 7_[+5]_65 chr1:10706555-10706635 3.8e-05 1_[+5]_71 chr2:241525730-241525810 5.8e-05 34_[+5]_38 chr18:77439402-77439482 5.8e-05 25_[+5]_47 chr16:58664402-58664482 5.8e-05 63_[+5]_9 chr1:234812114-234812194 5.8e-05 24_[+5]_48 chr20:21077058-21077138 7.1e-05 5_[+5]_67 chr12:104323514-10432359 7.1e-05 62_[+5]_10 chr19:48907016-48907096 7.1e-05 5_[+5]_67 chr13:31736510-31736590 7.1e-05 20_[+5]_52 chr5:74807658-74807738 9.6e-05 5_[+5]_67 chr15:40986886-40986966 9.6e-05 44_[+5]_28 chr7:150689951-150690031 9.6e-05 58_[+5]_14 chr4:104021022-104021102 9.6e-05 9_[+5]_63 chr5:178157709-178157789 9.6e-05 55_[+5]_17 chr19:7616337-7616417 0.00012 36_[+5]_36 chr2:39005285-39005365 0.00016 47_[+5]_25 chr13:26827954-26828034 0.00017 60_[+5]_12 chr2:27319252-27319332 0.00017 49_[+5]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SWGCATGC width=8 seqs=27 chr3:127771058-127771138 ( 69) CTGCATGC 1 chr12:88535977-88536057 ( 44) CTGCATGC 1 chr19:5790610-5790690 ( 11) CAGCATGC 1 chr10:92631672-92631752 ( 3) CAGCATGC 1 chr2:2617281-2617361 ( 3) CAGCATGC 1 chr11:450201-450281 ( 49) CAGCATGC 1 chr1:224544447-224544527 ( 2) CAGCATGC 1 chr12:110151321-11015140 ( 52) CAGCATGC 1 chr19:55815805-55815885 ( 8) CAGCATGC 1 chr1:10706555-10706635 ( 2) CAGCATGC 1 chr2:241525730-241525810 ( 35) GTGCATGC 1 chr18:77439402-77439482 ( 26) GTGCATGC 1 chr16:58664402-58664482 ( 64) GTGCATGC 1 chr1:234812114-234812194 ( 25) GTGCATGC 1 chr20:21077058-21077138 ( 6) TTGCATGC 1 chr12:104323514-10432359 ( 63) TTGCATGC 1 chr19:48907016-48907096 ( 6) TTGCATGC 1 chr13:31736510-31736590 ( 21) TTGCATGC 1 chr5:74807658-74807738 ( 6) CTGCATTC 1 chr15:40986886-40986966 ( 45) ATGCATGC 1 chr7:150689951-150690031 ( 59) CTGCATTC 1 chr4:104021022-104021102 ( 10) ATGCATGC 1 chr5:178157709-178157789 ( 56) CTGCATTC 1 chr19:7616337-7616417 ( 37) GAGCATGC 1 chr2:39005285-39005365 ( 48) AAGCATGC 1 chr13:26827954-26828034 ( 61) GTGCATTC 1 chr2:27319252-27319332 ( 50) GTGCATTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.594 E= 9.3e-001 -86 71 -24 -42 87 -1140 -1140 167 -1140 -1140 171 -1140 -1140 176 -1140 -1140 231 -1140 -1140 -1140 -1140 -1140 -1140 234 -1140 -1140 141 -9 -1140 176 -1140 -1140 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 27 E= 9.3e-001 0.111111 0.481481 0.259259 0.148148 0.370370 0.000000 0.000000 0.629630 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.814815 0.185185 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCATGC MEME-5 regular expression -------------------------------------------------------------------------------- [CG][TA]GCATGC -------------------------------------------------------------------------------- Time 17.76 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:49310036-49310116 2.28e-02 60_[+2(8.18e-05)]_12 chr19:49416530-49416610 1.53e-03 67_[+2(2.28e-05)]_5 chr19:49362001-49362081 1.86e-02 8_[+1(5.68e-06)]_64 chr19:55831281-55831361 3.01e-04 4_[+3(5.10e-05)]_54_[+2(2.28e-05)]_\ 6 chr19:54480860-54480940 1.09e-04 3_[+1(1.97e-05)]_60_[+2(4.61e-05)]_\ 1 chr19:54396434-54396514 3.67e-04 [+3(5.10e-05)]_54_[+2(2.28e-05)]_10 chr19:54682359-54682439 4.55e-06 2_[+1(5.68e-06)]_62_[+2(4.61e-05)] chr19:49385141-49385221 4.82e-02 68_[+2(4.61e-05)]_4 chr19:54411490-54411570 7.39e-02 65_[+2(4.61e-05)]_7 chr19:55709047-55709127 4.10e-03 3_[+1(6.23e-05)]_69 chr19:49486856-49486936 1.65e-04 64_[+2(2.28e-05)]_[+4(1.43e-05)] chr1:10706555-10706635 2.21e-02 1_[+5(3.85e-05)]_71 chr19:49228254-49228334 2.42e-04 5_[+3(5.10e-05)]_52_[+2(2.28e-05)]_\ 7 chr19:51142556-51142636 1.33e-05 2_[+1(5.68e-06)]_61_[+2(2.28e-05)]_\ 1 chr17:7118412-7118492 3.48e-04 70_[+2(2.28e-05)]_2 chr19:49013931-49014011 3.13e-04 3_[+1(1.97e-05)]_60_[+2(2.28e-05)]_\ 1 chr19:49248608-49248688 3.55e-05 2_[+1(5.68e-06)]_60_[+2(2.28e-05)]_\ 2 chr19:46027168-46027248 1.15e-02 5_[+3(5.10e-05)]_67 chr19:55816992-55817072 3.89e-05 2_[+1(4.51e-05)]_[+3(1.87e-05)]_51_\ [+2(6.83e-05)]_3 chr19:55815805-55815885 1.33e-03 7_[+5(3.85e-05)]_51_[+2(2.28e-05)]_\ 6 chr19:55690506-55690586 1.62e-04 69_[+2(2.28e-05)]_3 chr19:49017220-49017300 2.19e-02 36_[+4(4.16e-05)]_22_[+4(4.16e-05)]_\ 6 chr19:50651545-50651625 1.33e-03 5_[+3(5.10e-05)]_54_[+2(4.61e-05)]_\ 5 chr6:52929627-52929707 2.44e-02 2_[+1(8.91e-05)]_70 chr19:507891-507971 8.60e-06 1_[+3(1.87e-05)]_52_[+2(2.28e-05)]_\ 11 chr5:178157709-178157789 2.59e-04 28_[+2(4.61e-05)]_19_[+5(9.63e-05)]_\ 8_[+4(7.17e-05)]_1 chr19:48922670-48922750 2.24e-04 3_[+1(1.97e-05)]_[+3(1.87e-05)]_61 chr11:46134683-46134763 7.83e-07 11_[+3(1.87e-05)]_44_[+2(5.94e-05)]_\ 9 chr6:31866312-31866392 1.89e-04 33_[+4(1.43e-05)]_26_[+2(2.28e-05)]_\ 5 chr19:54382695-54382775 5.04e-04 68_[+3(5.10e-05)]_4 chr2:39005285-39005365 1.66e-02 1_[+1(8.91e-05)]_71 chr19:49148181-49148261 3.33e-06 2_[+1(1.97e-05)]_[+3(1.87e-05)]_53_\ [+2(2.28e-05)]_1 chr6:44101522-44101602 1.77e-04 50_[+2(2.28e-05)]_22 chr2:23598481-23598561 1.89e-04 27_[+2(4.61e-05)]_22_[+2(4.61e-05)]_\ 15 chr8:124054102-124054182 6.63e-03 5_[+3(1.87e-05)]_67 chr2:27319252-27319332 1.66e-03 57_[+2(4.61e-05)]_15 chr6:10147340-10147420 3.31e-04 11_[+3(5.10e-05)]_19_[+1(7.47e-05)]_\ [+3(5.10e-05)]_26 chr2:86332685-86332765 1.04e-02 6_[+3(1.87e-05)]_66 chr9:72435537-72435617 1.02e-05 53_[+5(9.63e-05)]_[+2(4.61e-05)]_\ [+4(5.89e-05)]_3 chr19:55677451-55677531 2.21e-02 80 chr16:68482608-68482688 5.70e-04 5_[+2(5.94e-05)]_67 chr17:40559666-40559746 3.02e-07 18_[+1(7.47e-05)]_[+3(1.87e-05)]_28_\ [+2(5.94e-05)]_10 chr19:49250489-49250569 2.08e-04 [+1(1.97e-05)]_72 chr2:136288406-136288486 3.53e-02 80 chr17:7358816-7358896 2.40e-05 [+1(6.23e-05)]_[+3(5.10e-05)]_54_\ [+2(2.28e-05)]_2 chr1:147142659-147142739 5.57e-02 58_[+1(1.97e-05)]_14 chr19:49422142-49422222 6.61e-06 2_[+1(1.97e-05)]_[+3(6.31e-05)]_20_\ [+3(5.10e-05)]_24_[+2(2.28e-05)]_2 chr1:234812114-234812194 2.73e-05 24_[+5(5.82e-05)]_8_[+4(1.43e-05)]_\ 32 chr3:69788455-69788535 6.59e-04 20_[+4(5.76e-06)]_52 chr14:36295379-36295459 2.03e-03 51_[+1(1.97e-05)]_21 chr19:49224354-49224434 7.03e-02 80 chr12:861513-861593 3.55e-02 9_[+1(1.97e-05)]_63 chr6:157801084-157801164 4.66e-02 28_[+4(5.89e-05)]_44 chr7:20257080-20257160 8.22e-02 50_[+1(5.37e-05)]_22 chr11:64387388-64387468 8.01e-04 20_[+2(2.28e-05)]_[+4(7.17e-05)]_44 chr17:7094935-7095015 5.20e-04 69_[+2(4.61e-05)]_3 chr6:43215024-43215104 4.00e-05 59_[+2(2.28e-05)]_13 chr19:7616337-7616417 5.57e-04 13_[+2(4.61e-05)]_59 chr2:220150936-220151016 6.47e-01 80 chr19:45988713-45988793 7.30e-06 1_[+1(4.51e-05)]_[+3(1.87e-05)]_53_\ [+2(4.61e-05)]_2 chr13:52157976-52158056 1.66e-03 18_[+3(5.10e-05)]_54 chr20:48732486-48732566 1.09e-03 32_[+4(8.04e-05)]_19_[+2(2.28e-05)]_\ 13 chr12:110151321-11015140 1.26e-03 51_[+5(3.85e-05)]_21 chr13:31736510-31736590 6.08e-04 20_[+5(7.10e-05)]_8_[+4(4.16e-05)]_\ 36 chr14:82000459-82000539 3.05e-07 10_[+1(5.68e-06)]_[+3(5.10e-05)]_41_\ [+4(9.34e-05)]_5 chr19:48907016-48907096 7.49e-05 5_[+5(7.10e-05)]_[+2(4.61e-05)]_59 chr11:64376987-64377067 1.46e-02 7_[+3(6.31e-05)]_25_[+3(6.31e-05)]_\ 32 chrX:134478609-134478689 8.83e-03 80 chr19:41084530-41084610 2.30e-02 31_[+4(7.17e-05)]_41 chr22:41840447-41840527 1.12e-03 24_[+2(2.28e-05)]_[+4(4.16e-05)]_40 chr19:38270225-38270305 7.38e-04 20_[+2(4.61e-05)]_[+4(4.16e-05)]_44 chr16:46918118-46918198 1.44e-02 25_[+2(5.94e-05)]_47 chr19:44331386-44331466 6.05e-04 24_[+1(1.97e-05)]_[+3(5.10e-05)]_40 chr3:98241881-98241961 2.13e-03 59_[+2(4.61e-05)]_[+4(5.03e-05)]_5 chr1:205744611-205744691 7.39e-03 65_[+2(4.61e-05)]_7 chr5:138775200-138775280 8.19e-05 24_[+4(9.34e-05)]_26_[+1(1.97e-05)]_\ 14 chr10:38383154-38383234 7.11e-03 15_[+2(4.61e-05)]_38_[+2(4.61e-05)]_\ 11 chr21:15755524-15755604 1.62e-01 80 chr1:47799895-47799975 4.16e-03 80 chr19:49404460-49404540 3.24e-04 8_[+1(1.97e-05)]_64 chr4:104021022-104021102 2.22e-04 9_[+5(9.63e-05)]_[+2(6.83e-05)]_\ [+4(5.89e-05)]_47 chr19:37861891-37861971 3.96e-03 16_[+2(4.61e-05)]_[+4(5.03e-05)]_48 chr12:32832085-32832165 1.38e-04 5_[+1(1.97e-05)]_[+3(1.87e-05)]_59 chr1:243419219-243419299 1.60e-03 56_[+1(1.97e-05)]_16 chr8:82755024-82755104 1.01e-06 2_[+1(5.68e-06)]_[+3(5.10e-05)]_42_\ [+2(5.94e-05)]_12 chr4:2538126-2538206 7.40e-02 80 chr19:38397761-38397841 3.25e-01 80 chr6:6890940-6891020 6.84e-02 70_[+2(4.61e-05)]_2 chr7:150689951-150690031 3.19e-04 9_[+5(3.85e-05)]_41_[+5(9.63e-05)]_\ 14 chr19:10828075-10828155 2.27e-04 29_[+2(5.94e-05)]_[+4(5.76e-06)]_35 chr14:81408128-81408208 1.17e-03 7_[+2(2.28e-05)]_[+4(9.34e-05)]_57 chr19:48866436-48866516 7.15e-03 5_[+3(5.10e-05)]_67 chr5:55008192-55008272 1.49e-03 49_[+1(1.97e-05)]_23 chrX:149736803-149736883 4.41e-05 23_[+1(5.68e-06)]_40_[+3(1.87e-05)]_\ 1 chr4:7075460-7075540 4.31e-04 62_[+2(4.61e-05)]_[+4(5.76e-06)]_2 chr11:65635650-65635730 3.42e-03 8_[+3(6.31e-05)]_64 chr2:217277090-217277170 8.83e-03 7_[+3(5.10e-05)]_65 chr12:104323514-10432359 1.46e-04 62_[+5(7.10e-05)]_10 chr9:133003022-133003102 4.68e-03 3_[+1(1.97e-05)]_69 chr18:9913576-9913656 3.15e-02 80 chr1:243418777-243418857 9.19e-05 10_[+1(6.23e-05)]_[+3(9.14e-05)]_54 chr19:19887272-19887352 1.02e-06 [+4(1.43e-05)]_36_[+1(1.97e-05)]_\ [+3(1.87e-05)]_20 chr19:41571019-41571099 5.93e-01 80 chr19:50836841-50836921 5.29e-02 80 chr10:124134024-12413410 8.47e-01 80 chr6:15245639-15245719 4.24e-04 37_[+2(2.28e-05)]_[+4(7.17e-05)]_27 chr19:57946562-57946642 1.70e-02 33_[+1(1.97e-05)]_39 chr1:154979443-154979523 2.40e-06 7_[+1(1.97e-05)]_35_[+2(2.28e-05)]_\ [+4(4.16e-05)]_14 chr3:61235784-61235864 7.50e-02 29_[+3(5.10e-05)]_43 chr10:43048346-43048426 2.95e-03 61_[+1(1.97e-05)]_[+3(5.10e-05)]_3 chr4:18023791-18023871 1.25e-01 80 chr12:56710136-56710216 3.37e-04 1_[+1(2.80e-05)]_[+3(5.10e-05)]_33_\ [+1(4.51e-05)]_22 chr11:134123326-13412340 5.54e-03 50_[+1(1.97e-05)]_22 chr16:30908469-30908549 8.24e-05 4_[+1(1.97e-05)]_68 chr15:40986886-40986966 2.96e-04 44_[+5(9.63e-05)]_28 chr16:31045641-31045721 1.18e-03 60_[+4(7.17e-05)]_12 chr13:30881224-30881304 1.85e-03 48_[+1(5.68e-06)]_24 chr9:15422705-15422785 1.77e-02 43_[+4(5.89e-05)]_29 chr16:31106263-31106343 7.87e-03 38_[+2(2.28e-05)]_34 chr1:31327123-31327203 1.41e-01 80 chr19:50163158-50163238 2.84e-04 9_[+1(1.97e-05)]_50_[+2(2.28e-05)]_\ 5 chr5:74807658-74807738 8.19e-04 5_[+5(9.63e-05)]_36_[+2(2.28e-05)]_\ 23 chr16:29687603-29687683 3.19e-04 28_[+2(4.61e-05)]_[+4(4.16e-05)]_36 chr19:49479588-49479668 7.55e-04 13_[+3(5.10e-05)]_50_[+2(2.28e-05)]_\ 1 chr19:44809204-44809284 9.88e-04 1_[+3(5.10e-05)]_39_[+1(6.23e-05)]_\ [+3(5.10e-05)]_16 chr16:30939332-30939412 8.48e-04 3_[+4(4.16e-05)]_61_[+2(4.61e-05)] chr17:7123126-7123206 8.77e-05 32_[+3(1.87e-05)]_40 chr19:49947068-49947148 2.05e-05 2_[+3(9.14e-05)]_52_[+2(4.61e-05)]_\ [+4(1.43e-05)]_2 chr2:202316287-202316367 1.34e-04 25_[+3(9.14e-05)]_28_[+2(2.28e-05)]_\ [+4(5.89e-05)]_3 chr9:101172675-101172755 3.20e-05 16_[+1(1.97e-05)]_[+3(5.10e-05)]_37_\ [+2(4.61e-05)]_3 chr17:7591570-7591650 1.25e-04 27_[+1(1.97e-05)]_[+3(1.87e-05)]_37 chr4:174291898-174291978 2.32e-01 9_[+4(7.17e-05)]_63 chr4:8160676-8160756 9.46e-04 40_[+1(4.51e-05)]_[+3(1.87e-05)]_24 chr13:41837968-41838048 9.16e-07 10_[+1(1.97e-05)]_25_[+2(2.28e-05)]_\ [+4(4.16e-05)]_21 chr15:41099707-41099787 3.88e-02 23_[+2(2.28e-05)]_49 chr14:59655260-59655340 2.04e-03 35_[+3(5.10e-05)]_37 chr16:1625721-1625801 2.96e-02 15_[+3(1.87e-05)]_14_[+3(6.31e-05)]_\ 35 chr18:56806971-56807051 2.86e-05 12_[+4(5.76e-06)]_47_[+1(5.37e-05)]_\ 5 chr11:66138873-66138953 5.30e-05 9_[+1(1.97e-05)]_40_[+2(2.28e-05)]_\ 15 chr1:224544447-224544527 2.94e-05 1_[+5(3.85e-05)]_36_[+1(1.97e-05)]_\ 27 chr1:22755259-22755339 9.18e-05 18_[+1(1.97e-05)]_[+3(1.87e-05)]_46 chr11:114310072-11431015 3.19e-03 2_[+3(6.31e-05)]_70 chr15:75182318-75182398 2.73e-03 7_[+1(1.97e-05)]_65 chrX:70315604-70315684 2.83e-03 24_[+4(4.16e-05)]_48 chr13:41768698-41768778 8.47e-02 80 chr10:104262586-10426266 4.21e-02 50_[+2(6.83e-05)]_22 chr6:110501298-110501378 5.63e-04 9_[+1(3.63e-05)]_63 chr2:54950547-54950627 2.41e-04 50_[+1(3.63e-05)]_[+3(5.10e-05)]_14 chr19:42463547-42463627 2.34e-04 22_[+4(1.43e-05)]_14_[+2(2.28e-05)]_\ [+4(4.16e-05)]_20 chr9:133783690-133783770 6.64e-01 80 chr10:103892652-10389273 1.60e-02 71_[+4(2.29e-05)]_1 chr19:49469192-49469272 2.99e-06 3_[+1(2.80e-05)]_[+3(1.87e-05)]_53_\ [+2(4.61e-05)] chr1:20767408-20767488 2.23e-02 67_[+2(4.61e-05)]_5 chr12:88535977-88536057 2.92e-05 43_[+5(1.90e-05)]_29 chr1:247095509-247095589 3.62e-02 80 chr19:4066018-4066098 4.64e-03 24_[+2(5.94e-05)]_[+4(9.34e-05)]_40 chr19:55708324-55708404 2.99e-03 3_[+1(1.97e-05)]_69 chr2:239143008-239143088 1.98e-03 13_[+1(2.80e-05)]_[+3(5.10e-05)]_51 chr1:154842891-154842971 5.15e-04 56_[+4(5.76e-06)]_16 chr16:33569517-33569597 9.10e-05 55_[+2(4.61e-05)]_[+4(2.29e-05)]_9 chr11:74109857-74109937 1.55e-06 12_[+4(1.43e-05)]_44_[+3(1.87e-05)]_\ 8 chr3:127771058-127771138 8.64e-03 68_[+5(1.90e-05)]_4 chr20:21077058-21077138 1.30e-04 5_[+5(7.10e-05)]_49_[+2(4.61e-05)]_\ [+4(5.03e-05)]_2 chrX:106045780-106045860 1.75e-04 52_[+1(1.97e-05)]_20 chr9:97021491-97021571 7.85e-02 68_[+4(7.17e-05)]_4 chr11:66035898-66035978 6.30e-02 80 chr11:113644471-11364455 2.13e-05 59_[+1(1.97e-05)]_[+3(1.87e-05)]_5 chr11:450201-450281 6.34e-05 2_[+3(1.87e-05)]_38_[+5(3.85e-05)]_\ 9_[+1(4.51e-05)]_7 chr19:42772884-42772964 3.35e-03 41_[+3(1.87e-05)]_31 chr19:50030971-50031051 7.47e-02 80 chr19:51152951-51153031 4.94e-04 42_[+1(1.97e-05)]_30 chr20:49084695-49084775 8.69e-03 9_[+1(1.97e-05)]_63 chr17:19912574-19912654 2.79e-03 8_[+1(2.80e-05)]_[+3(9.14e-05)]_56 chr11:73661985-73662065 6.55e-03 16_[+1(1.97e-05)]_56 chr2:2617281-2617361 8.11e-05 2_[+5(3.85e-05)]_29_[+1(5.68e-06)]_\ 33 chr6:14800257-14800337 1.59e-02 19_[+1(1.97e-05)]_53 chr19:49223924-49224004 1.39e-03 36_[+1(1.97e-05)]_[+3(5.10e-05)]_28 chr16:19535062-19535142 2.00e-02 80 chr3:50397077-50397157 2.57e-07 2_[+1(4.51e-05)]_[+3(5.10e-05)]_46_\ [+2(2.28e-05)]_[+4(1.43e-05)] chr10:111985582-11198566 1.49e-02 48_[+1(5.37e-05)]_24 chr4:79575018-79575098 1.01e-02 46_[+4(5.76e-06)]_26 chr10:44144326-44144406 2.35e-02 6_[+3(5.10e-05)]_66 chr16:58426721-58426801 3.66e-05 63_[+2(6.83e-05)]_[+4(5.76e-06)]_1 chr10:102673111-10267319 4.96e-02 58_[+2(2.28e-05)]_14 chr16:30103260-30103340 1.60e-03 68_[+2(2.28e-05)]_4 chr4:6374774-6374854 6.63e-05 23_[+1(1.97e-05)]_[+3(1.87e-05)]_41 chr22:33300158-33300238 1.84e-04 18_[+1(1.97e-05)]_[+3(1.87e-05)]_46 chr10:72288710-72288790 1.66e-04 48_[+2(4.61e-05)]_[+4(2.29e-05)]_16 chr16:4817226-4817306 4.29e-01 80 chr1:155990743-155990823 1.95e-03 49_[+2(2.28e-05)]_[+4(1.43e-05)]_15 chr7:100888046-100888126 4.59e-04 [+1(1.97e-05)]_[+3(5.10e-05)]_64 chr19:4304529-4304609 1.35e-02 28_[+1(1.97e-05)]_44 chr19:48848303-48848383 1.23e-03 23_[+1(1.97e-05)]_[+3(1.87e-05)]_41 chr9:37920544-37920624 2.10e-03 7_[+1(1.97e-05)]_65 chr12:124594395-12459447 8.76e-03 16_[+1(1.97e-05)]_56 chr18:71815675-71815755 3.82e-03 59_[+3(5.10e-05)]_13 chr8:30891092-30891172 2.74e-02 26_[+1(3.63e-05)]_46 chr17:7760558-7760638 1.79e-02 80 chr11:36355674-36355754 2.61e-04 55_[+2(4.61e-05)]_[+4(2.29e-05)]_9 chr5:178286893-178286973 4.88e-03 4_[+1(3.63e-05)]_[+3(5.10e-05)]_60 chr20:47805032-47805112 2.62e-01 80 chr19:52097750-52097830 1.61e-01 80 chr17:38443829-38443909 1.26e-02 26_[+3(9.14e-05)]_46 chr16:15150015-15150095 1.78e-02 29_[+4(9.34e-05)]_43 chr10:92631672-92631752 4.77e-03 2_[+5(3.85e-05)]_49_[+2(5.94e-05)]_\ 13 chr19:37569247-37569327 2.79e-03 31_[+1(1.97e-05)]_41 chr9:99616821-99616901 6.67e-03 47_[+1(1.97e-05)]_25 chr16:58664402-58664482 1.16e-03 63_[+5(5.82e-05)]_9 chr9:132031093-132031173 4.43e-03 4_[+1(1.97e-05)]_68 chr6:41703386-41703466 2.74e-04 40_[+4(1.43e-05)]_32 chr19:58838292-58838372 5.19e-08 4_[+1(5.68e-06)]_[+3(1.87e-05)]_47_\ [+4(4.16e-05)]_5 chr13:26827954-26828034 4.43e-02 80 chr11:125773086-12577316 1.35e-02 66_[+4(9.34e-05)]_6 chr19:36208412-36208492 3.47e-05 67_[+4(9.34e-05)]_5 chr1:151584366-151584446 7.47e-02 80 chr10:71754207-71754287 1.49e-04 54_[+2(4.61e-05)]_[+4(2.29e-05)]_10 chr2:38893003-38893083 1.28e-02 80 chr3:14361216-14361296 6.88e-03 32_[+1(1.97e-05)]_40 chr17:16439095-16439175 1.99e-02 80 chr3:50388506-50388586 4.89e-05 2_[+1(5.68e-06)]_60_[+2(6.83e-05)]_\ 2 chr18:60382257-60382337 4.05e-04 19_[+2(5.94e-05)]_[+4(9.34e-05)]_45 chr12:133532881-13353296 3.23e-03 6_[+1(1.97e-05)]_[+3(9.14e-05)]_16_\ [+1(3.63e-05)]_34 chr1:244816066-244816146 3.30e-02 80 chr20:62289892-62289972 1.42e-02 80 chr19:44488241-44488321 1.30e-01 80 chr19:37178350-37178430 8.26e-03 40_[+2(4.61e-05)]_[+4(9.34e-05)]_24 chr2:18741926-18742006 2.12e-03 48_[+2(5.94e-05)]_[+4(5.89e-05)]_16 chr8:103763436-103763516 1.22e-03 13_[+1(1.97e-05)]_59 chr20:62694376-62694456 1.31e-05 15_[+1(3.63e-05)]_[+3(5.10e-05)]_23_\ [+2(2.28e-05)]_18 chr18:32923948-32924028 1.55e-02 4_[+1(8.91e-05)]_[+3(5.10e-05)]_33_\ [+3(6.31e-05)]_4_[+3(5.10e-05)]_7 chr19:38720430-38720510 5.52e-02 80 chrX:106362050-106362130 2.57e-04 5_[+3(5.10e-05)]_47_[+2(2.28e-05)]_\ 12 chr14:73493984-73494064 1.29e-02 5_[+1(1.97e-05)]_67 chr18:77439402-77439482 8.74e-04 25_[+5(5.82e-05)]_47 chr10:103113630-10311371 2.69e-02 55_[+2(2.28e-05)]_17 chr22:30163037-30163117 5.83e-02 80 chr17:77005881-77005961 1.02e-02 80 chr22:22020238-22020318 1.11e-03 14_[+3(1.87e-05)]_58 chr19:5790610-5790690 4.52e-05 7_[+3(1.87e-05)]_31_[+3(1.87e-05)]_\ 26 chr3:13933305-13933385 1.21e-04 22_[+1(2.80e-05)]_[+3(1.87e-05)]_42 chr19:40697275-40697355 2.19e-03 16_[+1(1.97e-05)]_[+3(5.10e-05)]_48 chr12:96429425-96429505 5.27e-03 48_[+1(4.51e-05)]_24 chr20:25677511-25677591 1.40e-02 80 chr9:132346481-132346561 1.11e-04 13_[+1(1.97e-05)]_[+3(1.87e-05)]_51 chr17:46178868-46178948 4.87e-02 30_[+1(4.51e-05)]_42 chr14:77924022-77924102 4.47e-02 80 chr19:44598408-44598488 7.35e-03 15_[+4(9.34e-05)]_57 chr1:156308545-156308625 8.16e-04 22_[+2(2.28e-05)]_[+4(2.29e-05)]_42 chr6:5003901-5003981 2.22e-06 12_[+2(2.28e-05)]_[+4(4.16e-05)]_37_\ [+1(1.97e-05)]_7 chr2:241525730-241525810 9.73e-04 34_[+5(5.82e-05)]_38 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n09.farnam.hpc.yale.internal ********************************************************************************