******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/STAT5A.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr9:115308578-115308658 1.0000 80 chr7:32945037-32945117 1.0000 80 chr11:118583497-11858357 1.0000 80 chr15:101137140-10113722 1.0000 80 chr13:103259115-10325919 1.0000 80 chr12:83590594-83590674 1.0000 80 chr7:130756985-130757065 1.0000 80 chr11:19996531-19996611 1.0000 80 chr20:37081818-37081898 1.0000 80 chr6:15896067-15896147 1.0000 80 chr11:76622263-76622343 1.0000 80 chr10:106099976-10610005 1.0000 80 chr11:61872784-61872864 1.0000 80 chr2:192502338-192502418 1.0000 80 chr7:12787553-12787633 1.0000 80 chr3:12824102-12824182 1.0000 80 chr4:129438357-129438437 1.0000 80 chr1:159047057-159047137 1.0000 80 chr1:110406935-110407015 1.0000 80 chr11:44552082-44552162 1.0000 80 chr3:185191396-185191476 1.0000 80 chr4:123670897-123670977 1.0000 80 chr18:12904135-12904215 1.0000 80 chr2:217745550-217745630 1.0000 80 chr5:64372456-64372536 1.0000 80 chr11:95149232-95149312 1.0000 80 chr3:129418261-129418341 1.0000 80 chr1:19133960-19134040 1.0000 80 chrX:109244157-109244237 1.0000 80 chr12:32174039-32174119 1.0000 80 chr3:150169156-150169236 1.0000 80 chr5:132307987-132308067 1.0000 80 chr3:41741798-41741878 1.0000 80 chr9:138313374-138313454 1.0000 80 chr17:53421961-53422041 1.0000 80 chr1:22118090-22118170 1.0000 80 chr6:2980515-2980595 1.0000 80 chr1:219321186-219321266 1.0000 80 chr1:236515146-236515226 1.0000 80 chr2:39369288-39369368 1.0000 80 chr2:27760355-27760435 1.0000 80 chr14:70163715-70163795 1.0000 80 chr9:90776258-90776338 1.0000 80 chr20:2506421-2506501 1.0000 80 chr12:127392639-12739271 1.0000 80 chr6:113278000-113278080 1.0000 80 chr10:29101087-29101167 1.0000 80 chr2:158755909-158755989 1.0000 80 chr9:96873345-96873425 1.0000 80 chr2:101508785-101508865 1.0000 80 chr3:152798646-152798726 1.0000 80 chr8:17388581-17388661 1.0000 80 chr17:74597829-74597909 1.0000 80 chr7:150019631-150019711 1.0000 80 chr3:45103684-45103764 1.0000 80 chr3:23850189-23850269 1.0000 80 chr5:12615381-12615461 1.0000 80 chr8:98775204-98775284 1.0000 80 chr1:12717674-12717754 1.0000 80 chr2:241552408-241552488 1.0000 80 chr10:3969075-3969155 1.0000 80 chr6:49907858-49907938 1.0000 80 chr6:134516887-134516967 1.0000 80 chr4:184270329-184270409 1.0000 80 chr5:66502895-66502975 1.0000 80 chr22:21221936-21222016 1.0000 80 chr9:101614067-101614147 1.0000 80 chr21:37693181-37693261 1.0000 80 chr17:60711476-60711556 1.0000 80 chr4:38860605-38860685 1.0000 80 chr21:22572609-22572689 1.0000 80 chr4:142921053-142921133 1.0000 80 chr7:157100647-157100727 1.0000 80 chr8:144629515-144629595 1.0000 80 chr2:239331015-239331095 1.0000 80 chr2:13105700-13105780 1.0000 80 chr12:65114769-65114849 1.0000 80 chr4:106884788-106884868 1.0000 80 chr2:26980879-26980959 1.0000 80 chr8:91592724-91592804 1.0000 80 chr3:196105429-196105509 1.0000 80 chr11:46563308-46563388 1.0000 80 chr6:151550599-151550679 1.0000 80 chr7:97847732-97847812 1.0000 80 chr2:47525390-47525470 1.0000 80 chr4:123828118-123828198 1.0000 80 chr11:56894348-56894428 1.0000 80 chr8:27697275-27697355 1.0000 80 chr3:172109577-172109657 1.0000 80 chr1:100001134-100001214 1.0000 80 chr6:118858977-118859057 1.0000 80 chr1:109455845-109455925 1.0000 80 chr1:246334090-246334170 1.0000 80 chr8:42426818-42426898 1.0000 80 chr11:109763402-10976348 1.0000 80 chr2:208637339-208637419 1.0000 80 chr14:36733972-36734052 1.0000 80 chr6:159920188-159920268 1.0000 80 chr2:119496762-119496842 1.0000 80 chr11:35364980-35365060 1.0000 80 chr11:57668859-57668939 1.0000 80 chr9:132644309-132644389 1.0000 80 chr9:132641527-132641607 1.0000 80 chr7:73574680-73574760 1.0000 80 chr10:130397898-13039797 1.0000 80 chr2:127402973-127403053 1.0000 80 chr22:28243146-28243226 1.0000 80 chr19:50878166-50878246 1.0000 80 chr4:99722534-99722614 1.0000 80 chr17:40781842-40781922 1.0000 80 chr13:42833806-42833886 1.0000 80 chr2:178032838-178032918 1.0000 80 chr2:159177895-159177975 1.0000 80 chr10:52086749-52086829 1.0000 80 chr14:50437440-50437520 1.0000 80 chr12:57092924-57093004 1.0000 80 chr1:30664108-30664188 1.0000 80 chr14:91668792-91668872 1.0000 80 chr12:4262879-4262959 1.0000 80 chr7:70033909-70033989 1.0000 80 chrX:48539020-48539100 1.0000 80 chr12:7261826-7261906 1.0000 80 chr21:20806056-20806136 1.0000 80 chr19:45091217-45091297 1.0000 80 chr20:60101056-60101136 1.0000 80 chr12:12910707-12910787 1.0000 80 chr2:39666903-39666983 1.0000 80 chr13:92192384-92192464 1.0000 80 chr1:38989342-38989422 1.0000 80 chr5:125849878-125849958 1.0000 80 chr8:125966912-125966992 1.0000 80 chr2:807522-807602 1.0000 80 chr9:127894143-127894223 1.0000 80 chr8:126954521-126954601 1.0000 80 chr11:45856113-45856193 1.0000 80 chr6:134279208-134279288 1.0000 80 chr3:196569666-196569746 1.0000 80 chr11:22774620-22774700 1.0000 80 chr6:147208386-147208466 1.0000 80 chr1:118202652-118202732 1.0000 80 chr6:106968861-106968941 1.0000 80 chr8:144021576-144021656 1.0000 80 chr10:48402562-48402642 1.0000 80 chr11:61407737-61407817 1.0000 80 chr4:25052510-25052590 1.0000 80 chr1:160635702-160635782 1.0000 80 chr6:135405788-135405868 1.0000 80 chr7:129772266-129772346 1.0000 80 chr4:147328985-147329065 1.0000 80 chr20:40325243-40325323 1.0000 80 chr12:13441544-13441624 1.0000 80 chr3:151961291-151961371 1.0000 80 chr11:96688715-96688795 1.0000 80 chr8:48572438-48572518 1.0000 80 chr1:95100717-95100797 1.0000 80 chr6:35311424-35311504 1.0000 80 chr7:24964099-24964179 1.0000 80 chr12:66696193-66696273 1.0000 80 chr3:151391991-151392071 1.0000 80 chr17:25902285-25902365 1.0000 80 chr7:138043956-138044036 1.0000 80 chr2:27243260-27243340 1.0000 80 chr1:40849400-40849480 1.0000 80 chrX:123898339-123898419 1.0000 80 chr5:173280572-173280652 1.0000 80 chr17:73444701-73444781 1.0000 80 chr12:109217708-10921778 1.0000 80 chr1:249183730-249183810 1.0000 80 chrX:48797951-48798031 1.0000 80 chr7:119566116-119566196 1.0000 80 chr2:196233730-196233810 1.0000 80 chr6:20272843-20272923 1.0000 80 chr2:217957636-217957716 1.0000 80 chr5:119848602-119848682 1.0000 80 chr11:100885828-10088590 1.0000 80 chr8:41316000-41316080 1.0000 80 chr12:93964643-93964723 1.0000 80 chr17:53894319-53894399 1.0000 80 chr6:74274661-74274741 1.0000 80 chr1:172411661-172411741 1.0000 80 chr1:181875273-181875353 1.0000 80 chr1:191858328-191858408 1.0000 80 chr10:45906423-45906503 1.0000 80 chr14:103893963-10389404 1.0000 80 chr5:112214597-112214677 1.0000 80 chr5:134528297-134528377 1.0000 80 chr2:7050048-7050128 1.0000 80 chr16:20956609-20956689 1.0000 80 chr12:94136039-94136119 1.0000 80 chr8:56852636-56852716 1.0000 80 chr2:64582034-64582114 1.0000 80 chr9:373868-373948 1.0000 80 chr4:74962036-74962116 1.0000 80 chr8:41630348-41630428 1.0000 80 chr8:37749424-37749504 1.0000 80 chr15:91192006-91192086 1.0000 80 chr3:187463230-187463310 1.0000 80 chr16:84766432-84766512 1.0000 80 chr9:130841395-130841475 1.0000 80 chr6:15018792-15018872 1.0000 80 chr9:19748751-19748831 1.0000 80 chr10:108792260-10879234 1.0000 80 chr8:67967447-67967527 1.0000 80 chr11:13112075-13112155 1.0000 80 chr22:22302150-22302230 1.0000 80 chr1:247531518-247531598 1.0000 80 chr3:88245164-88245244 1.0000 80 chr1:35965522-35965602 1.0000 80 chr12:76508284-76508364 1.0000 80 chr1:22014379-22014459 1.0000 80 chr10:11183663-11183743 1.0000 80 chr3:50649420-50649500 1.0000 80 chrX:107801636-107801716 1.0000 80 chr13:99977201-99977281 1.0000 80 chr7:5123113-5123193 1.0000 80 chr6:143485788-143485868 1.0000 80 chr10:11752852-11752932 1.0000 80 chr1:180554754-180554834 1.0000 80 chr7:143123798-143123878 1.0000 80 chr5:133298951-133299031 1.0000 80 chr4:37002011-37002091 1.0000 80 chr12:123872834-12387291 1.0000 80 chr13:95926595-95926675 1.0000 80 chr12:46613762-46613842 1.0000 80 chr6:20458748-20458828 1.0000 80 chr9:77666395-77666475 1.0000 80 chr3:24393419-24393499 1.0000 80 chr6:3407267-3407347 1.0000 80 chr20:36188223-36188303 1.0000 80 chr6:25535666-25535746 1.0000 80 chrX:2792474-2792554 1.0000 80 chr6:160420335-160420415 1.0000 80 chr15:55532084-55532164 1.0000 80 chr10:17071673-17071753 1.0000 80 chr2:7020732-7020812 1.0000 80 chr18:3526563-3526643 1.0000 80 chr3:8899745-8899825 1.0000 80 chr5:148061933-148062013 1.0000 80 chr6:125404390-125404470 1.0000 80 chr3:156837296-156837376 1.0000 80 chr1:8960117-8960197 1.0000 80 chr20:23113738-23113818 1.0000 80 chr1:100234162-100234242 1.0000 80 chr3:45106321-45106401 1.0000 80 chr10:63540240-63540320 1.0000 80 chr15:48988536-48988616 1.0000 80 chr11:114165931-11416601 1.0000 80 chr1:234740765-234740845 1.0000 80 chr1:63156044-63156124 1.0000 80 chr11:75401493-75401573 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_STAT5A/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/STAT5A.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.274 C 0.222 G 0.229 T 0.275 Background letter frequencies (from file dataset with add-one prior applied): A 0.273 C 0.222 G 0.229 T 0.275 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TCYWGGAA MEME-1 width = 8 sites = 225 llr = 1763 E-value = 3.3e-286 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::33:aa pos.-specific C :a61:::: probability G :::17a:: matrix T a:34:::: bits 2.2 * 2.0 * * 1.7 ** *** 1.5 ** *** Relative 1.3 ** *** Entropy 1.1 ** **** (11.3 bits) 0.9 *** **** 0.7 *** **** 0.4 *** **** 0.2 ******** 0.0 -------- Multilevel TCCTGGAA consensus TAA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:114165931-11416601 37 1.46e-05 taaggccagt tcctggaa ttaagtgaaa chr20:23113738-23113818 18 1.46e-05 TTCTAACAAT TCCTGGAA CTGTGAAGTC chr3:156837296-156837376 35 1.46e-05 tactctgagt tcctggaa aacccacagt chr6:160420335-160420415 13 1.46e-05 ttggaggcct tcctggaa ctggggttaa chr20:36188223-36188303 41 1.46e-05 cccacccctt tcctggaa aactcatgaa chr12:76508284-76508364 40 1.46e-05 AGTATTACAT TCCTGGAA GTAGGGCAGG chr1:247531518-247531598 63 1.46e-05 aaccctcagt tcctggaa atccagtcct chr11:13112075-13112155 21 1.46e-05 tgctgtggct tcctggaa ctccctcctc chr15:91192006-91192086 33 1.46e-05 cccaccccat tcctggaa aactcataaa chr14:103893963-10389404 25 1.46e-05 ggcagagatt tcctggaa ctgaaggtcc chr6:74274661-74274741 56 1.46e-05 cccacccctt tcctggaa aactcatgaa chr12:93964643-93964723 30 1.46e-05 TGAGGCCGAT TCCTGGAA AGTTCCTGGA chr6:20272843-20272923 36 1.46e-05 ggagggcaat tcctggaa ctgaagattc chr2:196233730-196233810 49 1.46e-05 ggtaggtatt tcctggaa ctgagggttc chr7:138043956-138044036 61 1.46e-05 cccacccttt tcctggaa aaatcatgaa chr17:25902285-25902365 45 1.46e-05 ggcaggcaat tcctggaa ctgagggccc chr12:66696193-66696273 19 1.46e-05 CCTCGGCAAT TCCTGGAA ACTTGGGGCG chr5:125849878-125849958 34 1.46e-05 ggtgggcaat tcctggaa ttgagagttc chr13:92192384-92192464 32 1.46e-05 aaatacttgc tcctggaa gaaagactgt chr19:45091217-45091297 12 1.46e-05 ggtgggcaat tcctggaa ctgagggttc chr12:7261826-7261906 34 1.46e-05 AGGAGGAAGT TCCTGGAA ATGTTAAGCA chr19:50878166-50878246 61 1.46e-05 cctacccttt tcctggaa aactcatgaa chr9:132644309-132644389 27 1.46e-05 GCATCTCCTT TCCTGGAA TCAGCCCCAG chr6:118858977-118859057 70 1.46e-05 TTCCTCTGTT TCCTGGAA TAG chr4:123828118-123828198 49 1.46e-05 cctgcccctt tcctggaa aactcatgaa chr6:151550599-151550679 7 1.46e-05 ctcagt tcctggaa ctgcccacac chr2:26980879-26980959 31 1.46e-05 ggcggggatt tcctggaa gtgagtgttc chr4:106884788-106884868 28 1.46e-05 AAGGCCCTTT TCCTGGAA CCTTGATCTC chr8:144629515-144629595 51 1.46e-05 ggtggggagt tcctggaa cggattgtcc chr7:157100647-157100727 60 1.46e-05 ggtgggcagt tcctggaa ctgagggttc chr6:49907858-49907938 35 1.46e-05 ggtgaggcat tcctggaa ccataaaagt chr2:241552408-241552488 36 1.46e-05 CAGTGGCAAT TCCTGGAA CTCCAACCTC chr1:12717674-12717754 31 1.46e-05 tcatgaaaat tcctggaa aatggcggag chr8:98775204-98775284 59 1.46e-05 tccacccctt tcctggaa aactcatgaa chr3:23850189-23850269 63 1.46e-05 TGTGCGGTTT TCCTGGAA CCTGACATCT chr8:17388581-17388661 30 1.46e-05 AGGGCTGGTT TCCTGGAA ATGGTGTAAT chr2:158755909-158755989 68 1.46e-05 GATAGCTAGT TCCTGGAA TTGTA chr12:127392639-12739271 62 1.46e-05 tgtgggcagt tcctggaa ctgaaggttc chr20:2506421-2506501 58 1.46e-05 ggtgggcagt tcctggaa ctgaaggttc chr14:70163715-70163795 66 1.46e-05 gggtgggaat tcctggaa ctgaggg chr1:236515146-236515226 46 1.46e-05 tcatgagaat tcctggaa aaaggtggag chr9:138313374-138313454 42 1.46e-05 tccacccctt tcctggaa aactcatgaa chr1:19133960-19134040 3 1.46e-05 GC TCCTGGAA CGCCCTCCCT chr18:12904135-12904215 26 1.46e-05 cccgccttct tcctggaa aactcacgaa chr11:61872784-61872864 34 1.46e-05 tctgaccttt tcctggaa aattcatgaa chr11:76622263-76622343 57 1.46e-05 ggcgggcaat tcctggaa ctgagggttc chr6:15896067-15896147 58 1.46e-05 agtggtcaat tcctggaa ctgagggttc chr7:130756985-130757065 28 1.46e-05 tccacccctt tcctggaa aactcatgaa chr12:83590594-83590674 7 1.46e-05 gaaaat tcctggaa aaaggtacag chr15:101137140-10113722 56 1.46e-05 cccacccatt tcctggaa accctctcct chr11:75401493-75401573 13 2.90e-05 ttcacctttt tccaggaa ttttcatgaa chr3:45106321-45106401 57 2.90e-05 tcatgacttt tccaggaa ggggcaggca chr1:100234162-100234242 41 2.90e-05 ACAGACCCTT TCCAGGAA CTGTCCCCAT chr1:8960117-8960197 39 2.90e-05 ttcatgagtt tccaggaa aggggtgggt chr5:148061933-148062013 30 2.90e-05 TTATATTGGT TCCAGGAA ACATGCTTTC chr10:17071673-17071753 18 2.90e-05 GACAGACAGT TCCAGGAA GCATGACTCA chr1:180554754-180554834 7 2.90e-05 GTGGCT TCCAGGAA GCTCTGCCTC chr3:50649420-50649500 19 2.90e-05 CCAAGAACTT TCCAGGAA AACGGGGCGG chr1:22014379-22014459 9 2.90e-05 CCTATACT TCCAGGAA ATGCAGAATG chr3:88245164-88245244 12 2.90e-05 tcataagtgt tccaggaa aggggtgggc chr9:130841395-130841475 38 2.90e-05 GGCTGGCTTT TCCAGGAA GTTTGAGGAG chr8:41316000-41316080 51 2.90e-05 agccctcagt tccaggaa ttcccctccc chr6:35311424-35311504 57 2.90e-05 GCTGTTGACT TCCAGGAA CCCTTGGGGG chr3:151961291-151961371 53 2.90e-05 CTACCCAAAT TCCAGGAA AATGTCTGTT chr20:40325243-40325323 35 2.90e-05 TTCTGTCTTT TCCAGGAA TCAGTGACTC chr1:160635702-160635782 38 2.90e-05 gggaggggat tccaggaa gtgtaaaagc chr11:61407737-61407817 17 2.90e-05 aaccctcagt tccaggaa ttgcccaccc chr10:48402562-48402642 31 2.90e-05 CCAAGTAGGT TCCAGGAA AAAATACCAT chr6:147208386-147208466 39 2.90e-05 tcataagttt tccaggaa aggggtggac chr3:196569666-196569746 51 2.90e-05 tcatgagttt tccaggaa gggggtgagc chr1:38989342-38989422 24 2.90e-05 accatccatt tccaggaa tgttttatcg chr12:4262879-4262959 20 2.90e-05 CCACACTGAT TCCAGGAA GCCTGCCTGG chr1:30664108-30664188 48 2.90e-05 CAGAGCAGCT TCCAGGAA CTGACAGCAA chr2:47525390-47525470 35 2.90e-05 agccctcagt tccaggaa ttgcccacct chr3:196105429-196105509 24 2.90e-05 ttatgagttt tccaggaa aaggttgggc chr6:134516887-134516967 26 2.90e-05 TATGTCTATT TCCAGGAA GCTTATCAGT chr17:74597829-74597909 30 2.90e-05 tattatgttt tccaggaa acgggtgggg chr2:27760355-27760435 35 2.90e-05 GACACTGTTT TCCAGGAA TCGGAGCTGG chr2:217745550-217745630 49 2.90e-05 CCCATTAGAT TCCAGGAA ATGGCTGGTG chr11:44552082-44552162 49 2.90e-05 ggcagagatt tccaggaa ctgaggactc chr4:129438357-129438437 45 2.90e-05 CTATCCTGTT TCCAGGAA AGAGGTTTCC chr6:25535666-25535746 64 4.71e-05 GGGTACATTT TCTTGGAA GGAATTGAG chr16:20956609-20956689 59 4.71e-05 aaccctcact tcttggaa ttgcccaccc chr11:96688715-96688795 47 4.71e-05 GATGAATCGT TCTTGGAA ATTTTCTGAT chr6:135405788-135405868 44 4.71e-05 TATAGCAAAT TCTTGGAA CAACTACTAT chr6:134279208-134279288 49 4.71e-05 CATCTCTGTT TCTTGGAA AAGGAAGGCC chr12:12910707-12910787 73 4.71e-05 ccactgaagg tcttggaa chr7:70033909-70033989 32 4.71e-05 GACAAATGGT TCTTGGAA GAGTTGGTAC chr14:50437440-50437520 67 4.71e-05 GAGCTGCTTT TCTTGGAA ATGGCT chr13:42833806-42833886 34 4.71e-05 ATAAAGTATT TCTTGGAA CTATAACCCT chr8:42426818-42426898 59 4.71e-05 CTCCCTTTCT TCTTGGAA ACTTTTGATC chr8:27697275-27697355 35 4.71e-05 ttatgacaat tcttggaa aaagatggag chr21:37693181-37693261 23 4.71e-05 CGTTTCGAGT TCTTGGAA ACCCTGTGAA chr10:3969075-3969155 6 4.71e-05 TACAT TCTTGGAA TTGGCAGCGG chr2:101508785-101508865 34 4.71e-05 ATCATCAGAT TCTTGGAA AAAGGAAATC chr6:113278000-113278080 39 4.71e-05 CTCTCTTGTT TCTTGGAA AGAGAAGGCT chr11:95149232-95149312 47 4.71e-05 ctgacccatt tcttggaa cacaggctgt chr3:185191396-185191476 20 4.71e-05 CATAATCCTC TCTTGGAA AACGCCCAGA chr10:106099976-10610005 36 4.71e-05 tccttgcagt tcttggaa cctgtgcttc chrX:2792474-2792554 73 8.83e-05 ccattttctt tcctagaa chr9:77666395-77666475 34 8.83e-05 TGAAGCCTCT TCCTAGAA TGTAGTGTGG chr9:19748751-19748831 30 8.83e-05 GATAAAGCAT TCCTAGAA ACGGAAGGAA chr4:74962036-74962116 22 8.83e-05 gtgggcaatt tcctagaa ctgagggttc chr8:48572438-48572518 13 8.83e-05 TGACTCCGAT TCCGGGAA TTCTTGGTGG chr11:45856113-45856193 43 8.83e-05 CTTCCTCAAT TCCTAGAA CCAGCAGAAC chr2:807522-807602 50 8.83e-05 ttagaggact tcctagaa ctggagttaa chrX:48539020-48539100 65 8.83e-05 aaccttcagt tcccggaa ttgcccac chr22:28243146-28243226 39 8.83e-05 ATTTACTGCT TCCTAGAA ATCCAAGAAG chr7:73574680-73574760 58 8.83e-05 aaccgtcagt tccgggaa ttgcctaccc chr2:208637339-208637419 69 8.83e-05 cccgcccctt tcccggaa actc chr2:13105700-13105780 33 8.83e-05 GACTCATCTT TCCTAGAA ATACAACAAT chr17:60711476-60711556 27 8.83e-05 ggtgggcaat tcccggaa ctgagggagt chr4:184270329-184270409 23 8.83e-05 gaccctcaat tccgggaa tagcccatcc chr3:45103684-45103764 24 8.83e-05 ccggtccctt tcccggaa agtcatgaat chr7:150019631-150019711 31 8.83e-05 aagcctcagt tccgggaa ctgcccaccc chr3:152798646-152798726 10 8.83e-05 CAGTTGATT TCCTAGAA CTATACAATT chr10:29101087-29101167 34 8.83e-05 cccacccctt tccgggaa aactcattaa chr6:2980515-2980595 64 8.83e-05 tccacctctt tcccggaa aactcatga chr1:110406935-110407015 36 8.83e-05 ggtggagatt tcccggaa ccaaaggttc chr1:159047057-159047137 59 8.83e-05 ggcgggcaat tcccggaa tcggggtgcc chr7:12787553-12787633 10 8.83e-05 catgagttt tcccggaa agacgtgggc chr11:118583497-11858357 41 8.83e-05 ggtgggcaat tcccggaa ctgagggttc chr9:115308578-115308658 60 8.83e-05 cctgcccctt tcctagaa aacttatgaa chr6:15018792-15018872 55 1.06e-04 aacagCAACT TCTAGGAA ATAAGGCTGC chr12:94136039-94136119 59 1.06e-04 GAATCCCTGC TCTAGGAA CTGGTGAGTG chr5:173280572-173280652 65 1.06e-04 TGTGTCCATT TCTAGGAA CTGTTGAC chr4:99722534-99722614 44 1.06e-04 CAGCTATTCT TCTAGGAA AAGCTGTGAT chr5:12615381-12615461 56 1.06e-04 ccgcagaatt tctaggaa gcctatagac chr3:150169156-150169236 51 1.06e-04 CTGAACCTCT TCTAGGAA TTTGCCAGAT chr2:192502338-192502418 38 1.06e-04 atttctcagt tctaggaa gcaggcttat chr20:37081818-37081898 42 1.06e-04 caggcacaat tctaggaa ctggtaaaca chr7:32945037-32945117 30 1.06e-04 tgcagacgtt tctaggaa aacaaccccg chr15:48988536-48988616 53 1.23e-04 ttacagtgtt tccaagaa aggcatcaca chr5:133298951-133299031 50 1.23e-04 taaaagaact tccaagaa cgaccagaat chr12:13441544-13441624 45 1.23e-04 GTTAGCAATT TCCAAGAA AGGAAGAGGG chr1:118202652-118202732 55 1.23e-04 ATAAGAATGT TCCAAGAA CCTGACTAGC chr8:125966912-125966992 47 1.23e-04 GCTTCAGAGT TCCAAGAA TCCAAATGTT chr20:60101056-60101136 19 1.23e-04 aaacagaagt tccaagaa acgagttatc chr1:109455845-109455925 40 1.23e-04 gagagacgtt tccaagaa tatctgtagt chr3:172109577-172109657 64 1.23e-04 ATGAACGGTT TCCAAGAA AAGCATTCT chr11:46563308-46563388 45 1.23e-04 AGCAAGATTT TCCAAGAA AATGCAATGG chr1:219321186-219321266 36 1.23e-04 TGTTGCAGTT TCCAAGAA AGATGAGGTA chr12:46613762-46613842 25 1.75e-04 AGAATTGAAT TCTTAGAA CCCCCTTATC chr3:187463230-187463310 47 1.75e-04 AGAGCTCAAT TCTCGGAA TTTGAGCTTC chr9:373868-373948 40 1.75e-04 CACTCTAATT TCTTAGAA CCCCCTATTA chr11:100885828-10088590 22 1.75e-04 aatccttagt tctgggaa ttacccaccc chr1:40849400-40849480 33 1.75e-04 CCCTGTCAAT TCTGGGAA GTCTTAGGTA chr2:27243260-27243340 18 1.75e-04 tcctcacaat tctcggaa aacacagtcc chr2:39666903-39666983 34 1.75e-04 ttagaagcat tcttagaa gtcatctaat chr12:57092924-57093004 17 1.75e-04 ttatgagctt tctgggaa aggcatggca chr10:52086749-52086829 50 1.75e-04 GCTTAGAGAT TCTGGGAA GGGTGGGGCT chr2:159177895-159177975 38 1.75e-04 CGCTGCTGTT TCTGGGAA CTTCTCTCCT chr11:109763402-10976348 35 1.75e-04 AAAGAGAGAT TCTTAGAA GAACTGGGGG chr1:100001134-100001214 32 1.75e-04 tcaggagttt tctgggaa aggggtgggc chr9:90776258-90776338 39 1.75e-04 TGAGACCTTT TCTCGGAA GGTACATTAT chr17:53421961-53422041 45 1.75e-04 TGGGGAGAAT TCTTAGAA AACAGATGAT chr5:132307987-132308067 65 1.75e-04 aatgcttagt tctgggaa atccctgc chr12:32174039-32174119 23 1.75e-04 tcatgagttt tctgggaa aggggtgggt chrX:109244157-109244237 32 1.75e-04 tcatgagttt tctgggaa aggggtgggc chr5:64372456-64372536 26 1.75e-04 TAATCTCATT TCTGGGAA TGGAATACAA chr3:12824102-12824182 14 1.75e-04 tcacaaactt tctgggaa aggggcgggg chr13:103259115-10325919 9 1.75e-04 GTGGGTCT TCTTAGAA ATCTGCCTGT chr8:56852636-56852716 16 2.03e-04 AGGGCCGAGT TCCCAGAA GAGCTCTTGA chr14:91668792-91668872 62 2.03e-04 CCCTGGCTTT TCCCAGAA GAGGCTGTGG chr10:130397898-13039797 35 2.03e-04 ATCAGACATT TCCCAGAA ACAGTTCATA chr11:56894348-56894428 11 2.03e-04 caaacctttt tcccagaa gcaacactta chr8:91592724-91592804 58 2.03e-04 gtactacagt tccgagaa atcttaaagt chr9:101614067-101614147 38 2.03e-04 ggcgaggact tcccagaa ctgagggctc chr2:39369288-39369368 56 2.03e-04 TGGGTGTGGT TCCGAGAA GGTTTGGTTG chr1:22118090-22118170 24 2.03e-04 gatgggcatt tcccagaa ctgagagttc chr4:123670897-123670977 50 2.03e-04 GTTACACATT TCCCAGAA GACCAGAGCA chr12:109217708-10921778 41 2.24e-04 cATAACATTT TCTAAGAA AAGAGAACAA chrX:123898339-123898419 28 2.24e-04 aatggcaaat tctaagaa cagggagttt chr7:24964099-24964179 34 2.24e-04 CAGAACTGGT TCTAAGAA TTGCCGTCAT chr11:19996531-19996611 59 2.24e-04 TCTGTTTCAT TCTAAGAA AGAGCTTAAA chr6:125404390-125404470 19 2.60e-04 GCACGCCTCT TCTGAGAA TTGCTTGGAC chr6:3407267-3407347 23 2.60e-04 CCAGTTCTGT TCTGAGAA AGCACAGGCC chr3:24393419-24393499 18 2.60e-04 GCCAGCTCAT TCTGAGAA ACACAAAGAC chr7:143123798-143123878 37 2.60e-04 TACTGGGCCT TCTCAGAA CAGTGTTTCA chr13:99977201-99977281 30 2.60e-04 ataacacatt tctcagaa tgtgtcctta chr1:35965522-35965602 45 2.60e-04 GCACAAGAGT TCTCAGAA AAAGAAGGCA chr2:7050048-7050128 45 2.60e-04 AAGAATAGGT TCTCAGAA ATACAACCCA chr1:191858328-191858408 1 2.60e-04 . TCTCAGAA CTCACATGAG chr6:106968861-106968941 39 2.60e-04 TTTCAGTACT TCTCAGAA CGGTTCCCTA chr21:20806056-20806136 15 2.60e-04 agaaaggaat tctgagaa acgtggctaa chr2:178032838-178032918 7 2.60e-04 CTTCTT TCTCAGAA AAGCCACAGG chr11:57668859-57668939 39 2.60e-04 TTCAGGGATT TCTCAGAA GAGGCAGCTA chr14:36733972-36734052 12 2.60e-04 tgctgagagt tctgagaa aaactccttt chr12:65114769-65114849 16 2.60e-04 TGAGTCCATT TCTGAGAA ACACAGATGG chr4:142921053-142921133 29 2.60e-04 aaggatacat tctgagaa atgtcattag chr21:22572609-22572689 37 2.60e-04 GCGTGAGGGT TCTCAGAA GTCGCATGAC chr9:96873345-96873425 6 2.60e-04 TCTTA TCTGAGAA AAAGTACTTG chr3:129418261-129418341 41 2.60e-04 cccacccctt tctcagaa aactcattag chr10:108792260-10879234 38 2.72e-04 ACCTCTAGTT TCCTGGAG TGGGAAATCT chr9:127894143-127894223 46 2.72e-04 AGATCTAAAC TCCTGGAG ATAAACACTA chr1:181875273-181875353 38 3.05e-04 cctcttcttt tcctggta cagggggaaa chr17:53894319-53894399 23 3.05e-04 TGAGTAAATT TCCTGGTA AAAGATCCCA chr10:45906423-45906503 53 3.17e-04 tcatgagttt tccaggag aggggtgggc chrX:48797951-48798031 32 3.17e-04 GAGTCATGTT TCCAGGAG GAGGTTATCT chr6:143485788-143485868 13 3.49e-04 CATGATGGGT TCAAGGAA AAGGGACATA chr1:249183730-249183810 37 3.49e-04 ttcatgcatt tcaaggaa atcacttatc chr8:67967447-67967527 72 4.49e-04 aggatcttgt tcttggta a chr8:37749424-37749504 49 5.56e-04 CAATGGCATT TCCTAGTA ATTCACTTCA chr17:40781842-40781922 13 5.56e-04 ATATTCTGTT TCAGGGAA ATGTGTACAA chr6:159920188-159920268 13 5.56e-04 cacacgcaat tcgtggaa gacctgtttt chr2:239331015-239331095 32 5.56e-04 GAAGCCACTT TCGTGGAA CCTAACTGTC chr8:41630348-41630428 35 6.17e-04 AAGGGTGGGT ACCAGGAA CTCCACCCTT chr1:246334090-246334170 37 6.89e-04 ACTATGTCTT TCCAAGTA ATCTTCTACA chr4:38860605-38860685 34 6.89e-04 gtgactactt tccaagta ttaactcatt chr6:20458748-20458828 63 7.71e-04 TGAATTCTCT TCTTAGAG CCAACCCATA chr22:22302150-22302230 50 7.71e-04 GGAATTGCTA ACTTGGAA CAAGCCTTCT chr1:63156044-63156124 29 8.82e-04 TGTTTGATAG TCCCTGAA TTGGTTGTCT chr10:11752852-11752932 22 8.82e-04 tatctaaggt tcccagag tagtcaaatt chr16:84766432-84766512 33 8.82e-04 CATTCTGAAT TCCGTGAA ATCAGGCTTG chr5:119848602-119848682 63 8.82e-04 gacaggcaat tccctgaa tcggggtgcc chr3:151391991-151392071 54 8.82e-04 tggtcttctc tcctgtaa tggataatga chr7:97847732-97847812 40 8.82e-04 aggatcaaat acctagaa aaccctaaag chr10:11183663-11183743 42 1.05e-03 Ggctgaaaat tcagagaa ctgttagacc chr5:66502895-66502975 34 1.05e-03 CTGTGGTTTT TCAGAGAA ACCTGTACAG chr2:119496762-119496842 44 1.20e-03 taaggttttt gccaggaa tgcgcagcca chr11:22774620-22774700 45 1.46e-03 ATAGTATAAT TCTGAGTA ATCAGGCTCC chr8:126954521-126954601 44 1.57e-03 tccgaagctt actaagaa aaaccacaac chrX:107801636-107801716 63 1.63e-03 AGTCTTCCTG TCCTGGTG ATGATAAAGG chr7:129772266-129772346 66 1.63e-03 TGGGTTGAGT TCATGGAG CCTGTAT chr1:95100717-95100797 69 2.29e-03 TCTCTCCTTG TCTCATAA AAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:114165931-11416601 1.5e-05 36_[+1]_36 chr20:23113738-23113818 1.5e-05 17_[+1]_55 chr3:156837296-156837376 1.5e-05 34_[+1]_38 chr6:160420335-160420415 1.5e-05 12_[+1]_60 chr20:36188223-36188303 1.5e-05 40_[+1]_32 chr12:76508284-76508364 1.5e-05 39_[+1]_33 chr1:247531518-247531598 1.5e-05 62_[+1]_10 chr11:13112075-13112155 1.5e-05 20_[+1]_52 chr15:91192006-91192086 1.5e-05 32_[+1]_40 chr14:103893963-10389404 1.5e-05 24_[+1]_48 chr6:74274661-74274741 1.5e-05 55_[+1]_17 chr12:93964643-93964723 1.5e-05 29_[+1]_43 chr6:20272843-20272923 1.5e-05 35_[+1]_37 chr2:196233730-196233810 1.5e-05 48_[+1]_24 chr7:138043956-138044036 1.5e-05 60_[+1]_12 chr17:25902285-25902365 1.5e-05 44_[+1]_28 chr12:66696193-66696273 1.5e-05 18_[+1]_54 chr5:125849878-125849958 1.5e-05 33_[+1]_39 chr13:92192384-92192464 1.5e-05 31_[+1]_41 chr19:45091217-45091297 1.5e-05 11_[+1]_61 chr12:7261826-7261906 1.5e-05 33_[+1]_39 chr19:50878166-50878246 1.5e-05 60_[+1]_12 chr9:132644309-132644389 1.5e-05 26_[+1]_46 chr6:118858977-118859057 1.5e-05 69_[+1]_3 chr4:123828118-123828198 1.5e-05 48_[+1]_24 chr6:151550599-151550679 1.5e-05 6_[+1]_66 chr2:26980879-26980959 1.5e-05 30_[+1]_42 chr4:106884788-106884868 1.5e-05 27_[+1]_45 chr8:144629515-144629595 1.5e-05 50_[+1]_22 chr7:157100647-157100727 1.5e-05 59_[+1]_13 chr6:49907858-49907938 1.5e-05 34_[+1]_38 chr2:241552408-241552488 1.5e-05 35_[+1]_37 chr1:12717674-12717754 1.5e-05 30_[+1]_42 chr8:98775204-98775284 1.5e-05 58_[+1]_14 chr3:23850189-23850269 1.5e-05 62_[+1]_10 chr8:17388581-17388661 1.5e-05 29_[+1]_43 chr2:158755909-158755989 1.5e-05 67_[+1]_5 chr12:127392639-12739271 1.5e-05 61_[+1]_11 chr20:2506421-2506501 1.5e-05 57_[+1]_15 chr14:70163715-70163795 1.5e-05 65_[+1]_7 chr1:236515146-236515226 1.5e-05 45_[+1]_27 chr9:138313374-138313454 1.5e-05 41_[+1]_31 chr1:19133960-19134040 1.5e-05 2_[+1]_70 chr18:12904135-12904215 1.5e-05 25_[+1]_47 chr11:61872784-61872864 1.5e-05 33_[+1]_39 chr11:76622263-76622343 1.5e-05 56_[+1]_16 chr6:15896067-15896147 1.5e-05 57_[+1]_15 chr7:130756985-130757065 1.5e-05 27_[+1]_45 chr12:83590594-83590674 1.5e-05 6_[+1]_66 chr15:101137140-10113722 1.5e-05 55_[+1]_17 chr11:75401493-75401573 2.9e-05 12_[+1]_60 chr3:45106321-45106401 2.9e-05 56_[+1]_16 chr1:100234162-100234242 2.9e-05 40_[+1]_32 chr1:8960117-8960197 2.9e-05 38_[+1]_34 chr5:148061933-148062013 2.9e-05 29_[+1]_43 chr10:17071673-17071753 2.9e-05 17_[+1]_55 chr1:180554754-180554834 2.9e-05 6_[+1]_66 chr3:50649420-50649500 2.9e-05 18_[+1]_54 chr1:22014379-22014459 2.9e-05 8_[+1]_64 chr3:88245164-88245244 2.9e-05 11_[+1]_61 chr9:130841395-130841475 2.9e-05 37_[+1]_35 chr8:41316000-41316080 2.9e-05 50_[+1]_22 chr6:35311424-35311504 2.9e-05 56_[+1]_16 chr3:151961291-151961371 2.9e-05 52_[+1]_20 chr20:40325243-40325323 2.9e-05 34_[+1]_38 chr1:160635702-160635782 2.9e-05 37_[+1]_35 chr11:61407737-61407817 2.9e-05 16_[+1]_56 chr10:48402562-48402642 2.9e-05 30_[+1]_42 chr6:147208386-147208466 2.9e-05 38_[+1]_34 chr3:196569666-196569746 2.9e-05 50_[+1]_22 chr1:38989342-38989422 2.9e-05 23_[+1]_49 chr12:4262879-4262959 2.9e-05 19_[+1]_53 chr1:30664108-30664188 2.9e-05 47_[+1]_25 chr2:47525390-47525470 2.9e-05 34_[+1]_38 chr3:196105429-196105509 2.9e-05 23_[+1]_49 chr6:134516887-134516967 2.9e-05 25_[+1]_47 chr17:74597829-74597909 2.9e-05 29_[+1]_43 chr2:27760355-27760435 2.9e-05 34_[+1]_38 chr2:217745550-217745630 2.9e-05 48_[+1]_24 chr11:44552082-44552162 2.9e-05 48_[+1]_24 chr4:129438357-129438437 2.9e-05 44_[+1]_28 chr6:25535666-25535746 4.7e-05 63_[+1]_9 chr16:20956609-20956689 4.7e-05 58_[+1]_14 chr11:96688715-96688795 4.7e-05 46_[+1]_26 chr6:135405788-135405868 4.7e-05 43_[+1]_29 chr6:134279208-134279288 4.7e-05 48_[+1]_24 chr12:12910707-12910787 4.7e-05 72_[+1] chr7:70033909-70033989 4.7e-05 31_[+1]_41 chr14:50437440-50437520 4.7e-05 66_[+1]_6 chr13:42833806-42833886 4.7e-05 33_[+1]_39 chr8:42426818-42426898 4.7e-05 58_[+1]_14 chr8:27697275-27697355 4.7e-05 34_[+1]_38 chr21:37693181-37693261 4.7e-05 22_[+1]_50 chr10:3969075-3969155 4.7e-05 5_[+1]_67 chr2:101508785-101508865 4.7e-05 33_[+1]_39 chr6:113278000-113278080 4.7e-05 38_[+1]_34 chr11:95149232-95149312 4.7e-05 46_[+1]_26 chr3:185191396-185191476 4.7e-05 19_[+1]_53 chr10:106099976-10610005 4.7e-05 35_[+1]_37 chrX:2792474-2792554 8.8e-05 72_[+1] chr9:77666395-77666475 8.8e-05 33_[+1]_39 chr9:19748751-19748831 8.8e-05 29_[+1]_43 chr4:74962036-74962116 8.8e-05 21_[+1]_51 chr8:48572438-48572518 8.8e-05 12_[+1]_60 chr11:45856113-45856193 8.8e-05 42_[+1]_30 chr2:807522-807602 8.8e-05 49_[+1]_23 chrX:48539020-48539100 8.8e-05 64_[+1]_8 chr22:28243146-28243226 8.8e-05 38_[+1]_34 chr7:73574680-73574760 8.8e-05 57_[+1]_15 chr2:208637339-208637419 8.8e-05 68_[+1]_4 chr2:13105700-13105780 8.8e-05 32_[+1]_40 chr17:60711476-60711556 8.8e-05 26_[+1]_46 chr4:184270329-184270409 8.8e-05 22_[+1]_50 chr3:45103684-45103764 8.8e-05 23_[+1]_49 chr7:150019631-150019711 8.8e-05 30_[+1]_42 chr3:152798646-152798726 8.8e-05 9_[+1]_63 chr10:29101087-29101167 8.8e-05 33_[+1]_39 chr6:2980515-2980595 8.8e-05 63_[+1]_9 chr1:110406935-110407015 8.8e-05 35_[+1]_37 chr1:159047057-159047137 8.8e-05 58_[+1]_14 chr7:12787553-12787633 8.8e-05 9_[+1]_63 chr11:118583497-11858357 8.8e-05 40_[+1]_32 chr9:115308578-115308658 8.8e-05 59_[+1]_13 chr6:15018792-15018872 0.00011 54_[+1]_18 chr12:94136039-94136119 0.00011 58_[+1]_14 chr5:173280572-173280652 0.00011 64_[+1]_8 chr4:99722534-99722614 0.00011 43_[+1]_29 chr5:12615381-12615461 0.00011 55_[+1]_17 chr3:150169156-150169236 0.00011 50_[+1]_22 chr2:192502338-192502418 0.00011 37_[+1]_35 chr20:37081818-37081898 0.00011 41_[+1]_31 chr7:32945037-32945117 0.00011 29_[+1]_43 chr15:48988536-48988616 0.00012 52_[+1]_20 chr5:133298951-133299031 0.00012 49_[+1]_23 chr12:13441544-13441624 0.00012 44_[+1]_28 chr1:118202652-118202732 0.00012 54_[+1]_18 chr8:125966912-125966992 0.00012 46_[+1]_26 chr20:60101056-60101136 0.00012 18_[+1]_54 chr1:109455845-109455925 0.00012 39_[+1]_33 chr3:172109577-172109657 0.00012 63_[+1]_9 chr11:46563308-46563388 0.00012 44_[+1]_28 chr1:219321186-219321266 0.00012 35_[+1]_37 chr12:46613762-46613842 0.00017 24_[+1]_48 chr3:187463230-187463310 0.00017 46_[+1]_26 chr9:373868-373948 0.00017 39_[+1]_33 chr11:100885828-10088590 0.00017 21_[+1]_51 chr1:40849400-40849480 0.00017 32_[+1]_40 chr2:27243260-27243340 0.00017 17_[+1]_55 chr2:39666903-39666983 0.00017 33_[+1]_39 chr12:57092924-57093004 0.00017 16_[+1]_56 chr10:52086749-52086829 0.00017 49_[+1]_23 chr2:159177895-159177975 0.00017 37_[+1]_35 chr11:109763402-10976348 0.00017 34_[+1]_38 chr1:100001134-100001214 0.00017 31_[+1]_41 chr9:90776258-90776338 0.00017 38_[+1]_34 chr17:53421961-53422041 0.00017 44_[+1]_28 chr5:132307987-132308067 0.00017 64_[+1]_8 chr12:32174039-32174119 0.00017 22_[+1]_50 chrX:109244157-109244237 0.00017 31_[+1]_41 chr5:64372456-64372536 0.00017 25_[+1]_47 chr3:12824102-12824182 0.00017 13_[+1]_59 chr13:103259115-10325919 0.00017 8_[+1]_64 chr8:56852636-56852716 0.0002 15_[+1]_57 chr14:91668792-91668872 0.0002 61_[+1]_11 chr10:130397898-13039797 0.0002 34_[+1]_38 chr11:56894348-56894428 0.0002 10_[+1]_62 chr8:91592724-91592804 0.0002 57_[+1]_15 chr9:101614067-101614147 0.0002 37_[+1]_35 chr2:39369288-39369368 0.0002 55_[+1]_17 chr1:22118090-22118170 0.0002 23_[+1]_49 chr4:123670897-123670977 0.0002 49_[+1]_23 chr12:109217708-10921778 0.00022 40_[+1]_32 chrX:123898339-123898419 0.00022 27_[+1]_45 chr7:24964099-24964179 0.00022 33_[+1]_39 chr11:19996531-19996611 0.00022 58_[+1]_14 chr6:125404390-125404470 0.00026 18_[+1]_54 chr6:3407267-3407347 0.00026 22_[+1]_50 chr3:24393419-24393499 0.00026 17_[+1]_55 chr7:143123798-143123878 0.00026 36_[+1]_36 chr13:99977201-99977281 0.00026 29_[+1]_43 chr1:35965522-35965602 0.00026 44_[+1]_28 chr2:7050048-7050128 0.00026 44_[+1]_28 chr1:191858328-191858408 0.00026 [+1]_72 chr6:106968861-106968941 0.00026 38_[+1]_34 chr21:20806056-20806136 0.00026 14_[+1]_58 chr2:178032838-178032918 0.00026 6_[+1]_66 chr11:57668859-57668939 0.00026 38_[+1]_34 chr14:36733972-36734052 0.00026 11_[+1]_61 chr12:65114769-65114849 0.00026 15_[+1]_57 chr4:142921053-142921133 0.00026 28_[+1]_44 chr21:22572609-22572689 0.00026 36_[+1]_36 chr9:96873345-96873425 0.00026 5_[+1]_67 chr3:129418261-129418341 0.00026 40_[+1]_32 chr10:108792260-10879234 0.00027 37_[+1]_35 chr9:127894143-127894223 0.00027 45_[+1]_27 chr1:181875273-181875353 0.0003 37_[+1]_35 chr17:53894319-53894399 0.0003 22_[+1]_50 chr10:45906423-45906503 0.00032 52_[+1]_20 chrX:48797951-48798031 0.00032 31_[+1]_41 chr6:143485788-143485868 0.00035 12_[+1]_60 chr1:249183730-249183810 0.00035 36_[+1]_36 chr8:67967447-67967527 0.00045 71_[+1]_1 chr8:37749424-37749504 0.00056 48_[+1]_24 chr17:40781842-40781922 0.00056 12_[+1]_60 chr6:159920188-159920268 0.00056 12_[+1]_60 chr2:239331015-239331095 0.00056 31_[+1]_41 chr8:41630348-41630428 0.00062 34_[+1]_38 chr1:246334090-246334170 0.00069 36_[+1]_36 chr4:38860605-38860685 0.00069 33_[+1]_39 chr6:20458748-20458828 0.00077 62_[+1]_10 chr22:22302150-22302230 0.00077 49_[+1]_23 chr1:63156044-63156124 0.00088 28_[+1]_44 chr10:11752852-11752932 0.00088 21_[+1]_51 chr16:84766432-84766512 0.00088 32_[+1]_40 chr5:119848602-119848682 0.00088 62_[+1]_10 chr3:151391991-151392071 0.00088 53_[+1]_19 chr7:97847732-97847812 0.00088 39_[+1]_33 chr10:11183663-11183743 0.0011 41_[+1]_31 chr5:66502895-66502975 0.0011 33_[+1]_39 chr2:119496762-119496842 0.0012 43_[+1]_29 chr11:22774620-22774700 0.0015 44_[+1]_28 chr8:126954521-126954601 0.0016 43_[+1]_29 chrX:107801636-107801716 0.0016 62_[+1]_10 chr7:129772266-129772346 0.0016 65_[+1]_7 chr1:95100717-95100797 0.0023 68_[+1]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCYWGGAA width=8 seqs=225 chr11:114165931-11416601 ( 37) TCCTGGAA 1 chr20:23113738-23113818 ( 18) TCCTGGAA 1 chr3:156837296-156837376 ( 35) TCCTGGAA 1 chr6:160420335-160420415 ( 13) TCCTGGAA 1 chr20:36188223-36188303 ( 41) TCCTGGAA 1 chr12:76508284-76508364 ( 40) TCCTGGAA 1 chr1:247531518-247531598 ( 63) TCCTGGAA 1 chr11:13112075-13112155 ( 21) TCCTGGAA 1 chr15:91192006-91192086 ( 33) TCCTGGAA 1 chr14:103893963-10389404 ( 25) TCCTGGAA 1 chr6:74274661-74274741 ( 56) TCCTGGAA 1 chr12:93964643-93964723 ( 30) TCCTGGAA 1 chr6:20272843-20272923 ( 36) TCCTGGAA 1 chr2:196233730-196233810 ( 49) TCCTGGAA 1 chr7:138043956-138044036 ( 61) TCCTGGAA 1 chr17:25902285-25902365 ( 45) TCCTGGAA 1 chr12:66696193-66696273 ( 19) TCCTGGAA 1 chr5:125849878-125849958 ( 34) TCCTGGAA 1 chr13:92192384-92192464 ( 32) TCCTGGAA 1 chr19:45091217-45091297 ( 12) TCCTGGAA 1 chr12:7261826-7261906 ( 34) TCCTGGAA 1 chr19:50878166-50878246 ( 61) TCCTGGAA 1 chr9:132644309-132644389 ( 27) TCCTGGAA 1 chr6:118858977-118859057 ( 70) TCCTGGAA 1 chr4:123828118-123828198 ( 49) TCCTGGAA 1 chr6:151550599-151550679 ( 7) TCCTGGAA 1 chr2:26980879-26980959 ( 31) TCCTGGAA 1 chr4:106884788-106884868 ( 28) TCCTGGAA 1 chr8:144629515-144629595 ( 51) TCCTGGAA 1 chr7:157100647-157100727 ( 60) TCCTGGAA 1 chr6:49907858-49907938 ( 35) TCCTGGAA 1 chr2:241552408-241552488 ( 36) TCCTGGAA 1 chr1:12717674-12717754 ( 31) TCCTGGAA 1 chr8:98775204-98775284 ( 59) TCCTGGAA 1 chr3:23850189-23850269 ( 63) TCCTGGAA 1 chr8:17388581-17388661 ( 30) TCCTGGAA 1 chr2:158755909-158755989 ( 68) TCCTGGAA 1 chr12:127392639-12739271 ( 62) TCCTGGAA 1 chr20:2506421-2506501 ( 58) TCCTGGAA 1 chr14:70163715-70163795 ( 66) TCCTGGAA 1 chr1:236515146-236515226 ( 46) TCCTGGAA 1 chr9:138313374-138313454 ( 42) TCCTGGAA 1 chr1:19133960-19134040 ( 3) TCCTGGAA 1 chr18:12904135-12904215 ( 26) TCCTGGAA 1 chr11:61872784-61872864 ( 34) TCCTGGAA 1 chr11:76622263-76622343 ( 57) TCCTGGAA 1 chr6:15896067-15896147 ( 58) TCCTGGAA 1 chr7:130756985-130757065 ( 28) TCCTGGAA 1 chr12:83590594-83590674 ( 7) TCCTGGAA 1 chr15:101137140-10113722 ( 56) TCCTGGAA 1 chr11:75401493-75401573 ( 13) TCCAGGAA 1 chr3:45106321-45106401 ( 57) TCCAGGAA 1 chr1:100234162-100234242 ( 41) TCCAGGAA 1 chr1:8960117-8960197 ( 39) TCCAGGAA 1 chr5:148061933-148062013 ( 30) TCCAGGAA 1 chr10:17071673-17071753 ( 18) TCCAGGAA 1 chr1:180554754-180554834 ( 7) TCCAGGAA 1 chr3:50649420-50649500 ( 19) TCCAGGAA 1 chr1:22014379-22014459 ( 9) TCCAGGAA 1 chr3:88245164-88245244 ( 12) TCCAGGAA 1 chr9:130841395-130841475 ( 38) TCCAGGAA 1 chr8:41316000-41316080 ( 51) TCCAGGAA 1 chr6:35311424-35311504 ( 57) TCCAGGAA 1 chr3:151961291-151961371 ( 53) TCCAGGAA 1 chr20:40325243-40325323 ( 35) TCCAGGAA 1 chr1:160635702-160635782 ( 38) TCCAGGAA 1 chr11:61407737-61407817 ( 17) TCCAGGAA 1 chr10:48402562-48402642 ( 31) TCCAGGAA 1 chr6:147208386-147208466 ( 39) TCCAGGAA 1 chr3:196569666-196569746 ( 51) TCCAGGAA 1 chr1:38989342-38989422 ( 24) TCCAGGAA 1 chr12:4262879-4262959 ( 20) TCCAGGAA 1 chr1:30664108-30664188 ( 48) TCCAGGAA 1 chr2:47525390-47525470 ( 35) TCCAGGAA 1 chr3:196105429-196105509 ( 24) TCCAGGAA 1 chr6:134516887-134516967 ( 26) TCCAGGAA 1 chr17:74597829-74597909 ( 30) TCCAGGAA 1 chr2:27760355-27760435 ( 35) TCCAGGAA 1 chr2:217745550-217745630 ( 49) TCCAGGAA 1 chr11:44552082-44552162 ( 49) TCCAGGAA 1 chr4:129438357-129438437 ( 45) TCCAGGAA 1 chr6:25535666-25535746 ( 64) TCTTGGAA 1 chr16:20956609-20956689 ( 59) TCTTGGAA 1 chr11:96688715-96688795 ( 47) TCTTGGAA 1 chr6:135405788-135405868 ( 44) TCTTGGAA 1 chr6:134279208-134279288 ( 49) TCTTGGAA 1 chr12:12910707-12910787 ( 73) TCTTGGAA 1 chr7:70033909-70033989 ( 32) TCTTGGAA 1 chr14:50437440-50437520 ( 67) TCTTGGAA 1 chr13:42833806-42833886 ( 34) TCTTGGAA 1 chr8:42426818-42426898 ( 59) TCTTGGAA 1 chr8:27697275-27697355 ( 35) TCTTGGAA 1 chr21:37693181-37693261 ( 23) TCTTGGAA 1 chr10:3969075-3969155 ( 6) TCTTGGAA 1 chr2:101508785-101508865 ( 34) TCTTGGAA 1 chr6:113278000-113278080 ( 39) TCTTGGAA 1 chr11:95149232-95149312 ( 47) TCTTGGAA 1 chr3:185191396-185191476 ( 20) TCTTGGAA 1 chr10:106099976-10610005 ( 36) TCTTGGAA 1 chrX:2792474-2792554 ( 73) TCCTAGAA 1 chr9:77666395-77666475 ( 34) TCCTAGAA 1 chr9:19748751-19748831 ( 30) TCCTAGAA 1 chr4:74962036-74962116 ( 22) TCCTAGAA 1 chr8:48572438-48572518 ( 13) TCCGGGAA 1 chr11:45856113-45856193 ( 43) TCCTAGAA 1 chr2:807522-807602 ( 50) TCCTAGAA 1 chrX:48539020-48539100 ( 65) TCCCGGAA 1 chr22:28243146-28243226 ( 39) TCCTAGAA 1 chr7:73574680-73574760 ( 58) TCCGGGAA 1 chr2:208637339-208637419 ( 69) TCCCGGAA 1 chr2:13105700-13105780 ( 33) TCCTAGAA 1 chr17:60711476-60711556 ( 27) TCCCGGAA 1 chr4:184270329-184270409 ( 23) TCCGGGAA 1 chr3:45103684-45103764 ( 24) TCCCGGAA 1 chr7:150019631-150019711 ( 31) TCCGGGAA 1 chr3:152798646-152798726 ( 10) TCCTAGAA 1 chr10:29101087-29101167 ( 34) TCCGGGAA 1 chr6:2980515-2980595 ( 64) TCCCGGAA 1 chr1:110406935-110407015 ( 36) TCCCGGAA 1 chr1:159047057-159047137 ( 59) TCCCGGAA 1 chr7:12787553-12787633 ( 10) TCCCGGAA 1 chr11:118583497-11858357 ( 41) TCCCGGAA 1 chr9:115308578-115308658 ( 60) TCCTAGAA 1 chr6:15018792-15018872 ( 55) TCTAGGAA 1 chr12:94136039-94136119 ( 59) TCTAGGAA 1 chr5:173280572-173280652 ( 65) TCTAGGAA 1 chr4:99722534-99722614 ( 44) TCTAGGAA 1 chr5:12615381-12615461 ( 56) TCTAGGAA 1 chr3:150169156-150169236 ( 51) TCTAGGAA 1 chr2:192502338-192502418 ( 38) TCTAGGAA 1 chr20:37081818-37081898 ( 42) TCTAGGAA 1 chr7:32945037-32945117 ( 30) TCTAGGAA 1 chr15:48988536-48988616 ( 53) TCCAAGAA 1 chr5:133298951-133299031 ( 50) TCCAAGAA 1 chr12:13441544-13441624 ( 45) TCCAAGAA 1 chr1:118202652-118202732 ( 55) TCCAAGAA 1 chr8:125966912-125966992 ( 47) TCCAAGAA 1 chr20:60101056-60101136 ( 19) TCCAAGAA 1 chr1:109455845-109455925 ( 40) TCCAAGAA 1 chr3:172109577-172109657 ( 64) TCCAAGAA 1 chr11:46563308-46563388 ( 45) TCCAAGAA 1 chr1:219321186-219321266 ( 36) TCCAAGAA 1 chr12:46613762-46613842 ( 25) TCTTAGAA 1 chr3:187463230-187463310 ( 47) TCTCGGAA 1 chr9:373868-373948 ( 40) TCTTAGAA 1 chr11:100885828-10088590 ( 22) TCTGGGAA 1 chr1:40849400-40849480 ( 33) TCTGGGAA 1 chr2:27243260-27243340 ( 18) TCTCGGAA 1 chr2:39666903-39666983 ( 34) TCTTAGAA 1 chr12:57092924-57093004 ( 17) TCTGGGAA 1 chr10:52086749-52086829 ( 50) TCTGGGAA 1 chr2:159177895-159177975 ( 38) TCTGGGAA 1 chr11:109763402-10976348 ( 35) TCTTAGAA 1 chr1:100001134-100001214 ( 32) TCTGGGAA 1 chr9:90776258-90776338 ( 39) TCTCGGAA 1 chr17:53421961-53422041 ( 45) TCTTAGAA 1 chr5:132307987-132308067 ( 65) TCTGGGAA 1 chr12:32174039-32174119 ( 23) TCTGGGAA 1 chrX:109244157-109244237 ( 32) TCTGGGAA 1 chr5:64372456-64372536 ( 26) TCTGGGAA 1 chr3:12824102-12824182 ( 14) TCTGGGAA 1 chr13:103259115-10325919 ( 9) TCTTAGAA 1 chr8:56852636-56852716 ( 16) TCCCAGAA 1 chr14:91668792-91668872 ( 62) TCCCAGAA 1 chr10:130397898-13039797 ( 35) TCCCAGAA 1 chr11:56894348-56894428 ( 11) TCCCAGAA 1 chr8:91592724-91592804 ( 58) TCCGAGAA 1 chr9:101614067-101614147 ( 38) TCCCAGAA 1 chr2:39369288-39369368 ( 56) TCCGAGAA 1 chr1:22118090-22118170 ( 24) TCCCAGAA 1 chr4:123670897-123670977 ( 50) TCCCAGAA 1 chr12:109217708-10921778 ( 41) TCTAAGAA 1 chrX:123898339-123898419 ( 28) TCTAAGAA 1 chr7:24964099-24964179 ( 34) TCTAAGAA 1 chr11:19996531-19996611 ( 59) TCTAAGAA 1 chr6:125404390-125404470 ( 19) TCTGAGAA 1 chr6:3407267-3407347 ( 23) TCTGAGAA 1 chr3:24393419-24393499 ( 18) TCTGAGAA 1 chr7:143123798-143123878 ( 37) TCTCAGAA 1 chr13:99977201-99977281 ( 30) TCTCAGAA 1 chr1:35965522-35965602 ( 45) TCTCAGAA 1 chr2:7050048-7050128 ( 45) TCTCAGAA 1 chr1:191858328-191858408 ( 1) TCTCAGAA 1 chr6:106968861-106968941 ( 39) TCTCAGAA 1 chr21:20806056-20806136 ( 15) TCTGAGAA 1 chr2:178032838-178032918 ( 7) TCTCAGAA 1 chr11:57668859-57668939 ( 39) TCTCAGAA 1 chr14:36733972-36734052 ( 12) TCTGAGAA 1 chr12:65114769-65114849 ( 16) TCTGAGAA 1 chr4:142921053-142921133 ( 29) TCTGAGAA 1 chr21:22572609-22572689 ( 37) TCTCAGAA 1 chr9:96873345-96873425 ( 6) TCTGAGAA 1 chr3:129418261-129418341 ( 41) TCTCAGAA 1 chr10:108792260-10879234 ( 38) TCCTGGAG 1 chr9:127894143-127894223 ( 46) TCCTGGAG 1 chr1:181875273-181875353 ( 38) TCCTGGTA 1 chr17:53894319-53894399 ( 23) TCCTGGTA 1 chr10:45906423-45906503 ( 53) TCCAGGAG 1 chrX:48797951-48798031 ( 32) TCCAGGAG 1 chr6:143485788-143485868 ( 13) TCAAGGAA 1 chr1:249183730-249183810 ( 37) TCAAGGAA 1 chr8:67967447-67967527 ( 72) TCTTGGTA 1 chr8:37749424-37749504 ( 49) TCCTAGTA 1 chr17:40781842-40781922 ( 13) TCAGGGAA 1 chr6:159920188-159920268 ( 13) TCGTGGAA 1 chr2:239331015-239331095 ( 32) TCGTGGAA 1 chr8:41630348-41630428 ( 35) ACCAGGAA 1 chr1:246334090-246334170 ( 37) TCCAAGTA 1 chr4:38860605-38860685 ( 34) TCCAAGTA 1 chr6:20458748-20458828 ( 63) TCTTAGAG 1 chr22:22302150-22302230 ( 50) ACTTGGAA 1 chr1:63156044-63156124 ( 29) TCCCTGAA 1 chr10:11752852-11752932 ( 22) TCCCAGAG 1 chr16:84766432-84766512 ( 33) TCCGTGAA 1 chr5:119848602-119848682 ( 63) TCCCTGAA 1 chr3:151391991-151392071 ( 54) TCCTGTAA 1 chr7:97847732-97847812 ( 40) ACCTAGAA 1 chr10:11183663-11183743 ( 42) TCAGAGAA 1 chr5:66502895-66502975 ( 34) TCAGAGAA 1 chr2:119496762-119496842 ( 44) GCCAGGAA 1 chr11:22774620-22774700 ( 45) TCTGAGTA 1 chr8:126954521-126954601 ( 44) ACTAAGAA 1 chrX:107801636-107801716 ( 63) TCCTGGTG 1 chr7:129772266-129772346 ( 66) TCATGGAG 1 chr1:95100717-95100797 ( 69) TCTCATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.94032 E= 3.3e-286 -394 -1446 -569 183 -1446 217 -1446 -1446 -336 150 -469 28 3 -60 -74 67 14 -1446 158 -436 -1446 -1446 211 -495 182 -1446 -1446 -295 182 -1446 -269 -1446 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 225 E= 3.3e-286 0.017778 0.000000 0.004444 0.977778 0.000000 1.000000 0.000000 0.000000 0.026667 0.631111 0.008889 0.333333 0.280000 0.146667 0.137778 0.435556 0.302222 0.000000 0.684444 0.013333 0.000000 0.000000 0.991111 0.008889 0.964444 0.000000 0.000000 0.035556 0.964444 0.000000 0.035556 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYWGGAA MEME-1 regular expression -------------------------------------------------------------------------------- TC[CT][TA][GA]GAA -------------------------------------------------------------------------------- Time 5.50 secs. ******************************************************************************** ******************************************************************************** MOTIF AGGGGWGG MEME-2 width = 8 sites = 68 llr = 586 E-value = 5.5e-047 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 8::1:4:: pos.-specific C ::::11:: probability G 19a99:aa matrix T :::::5:: bits 2.2 * * 2.0 * ** 1.7 ** ** 1.5 ** * ** Relative 1.3 **** ** Entropy 1.1 ***** ** (12.4 bits) 0.9 ***** ** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGGGGTGG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:45106321-45106401 34 1.08e-05 atactaaaca aggggtgg attattcatg chr1:8960117-8960197 47 1.08e-05 tttccaggaa aggggtgg gtgatttcca chr3:88245164-88245244 20 1.08e-05 gttccaggaa aggggtgg gcagttccca chr4:74962036-74962116 8 1.08e-05 ctaggaa aggggtgg gcaatttcct chr10:45906423-45906503 61 1.08e-05 tttccaggag aggggtgg gcaattccag chr6:147208386-147208466 47 1.08e-05 tttccaggaa aggggtgg acaatcccca chr3:196569666-196569746 28 1.08e-05 atgctaaaca aggggtgg attgttcatg chr5:125849878-125849958 21 1.08e-05 tttcaggaaa aggggtgg gcaattcctg chr1:100001134-100001214 40 1.08e-05 tttctgggaa aggggtgg gcaattccca chr8:27697275-27697355 12 1.08e-05 tcttcaacca aggggtgg aatatttatg chr8:144629515-144629595 38 1.08e-05 tttccaggaa aggggtgg ggagttcctg chr7:157100647-157100727 16 1.08e-05 tgctaaacaa aggggtgg attattcatg chr17:60711476-60711556 14 1.08e-05 tttctgggaa aggggtgg gcaattcccg chr20:2506421-2506501 14 1.08e-05 atgccaaaca aggggtgg attattcagg chr14:70163715-70163795 54 1.08e-05 tttccaggaa aggggtgg gaattcctgg chr12:32174039-32174119 31 1.08e-05 tttctgggaa aggggtgg gtaattccca chrX:109244157-109244237 40 1.08e-05 tttctgggaa aggggtgg gcaattctca chr1:110406935-110407015 23 1.08e-05 tttctaggaa aggggtgg agatttcccg chr11:118583497-11858357 28 1.08e-05 tttcggggaa aggggtgg gcaattcccg chr7:32945037-32945117 70 1.08e-05 ttaccaggaa aggggtgg caa chr7:143123798-143123878 12 2.16e-05 AGCCTTCCTT AGGGGAGG TAACCCTTAC chr16:20956609-20956689 41 2.16e-05 tagtctagaa aggggagg aaccctcact chr6:74274661-74274741 17 2.16e-05 tggtctagaa aggggagg agctctcagt chr8:41316000-41316080 33 2.16e-05 ttatctagaa aggggagg agccctcagt chr11:100885828-10088590 4 2.16e-05 aaa aggggagg aatccttagt chr6:20272843-20272923 23 2.16e-05 tttctgggaa aggggagg gcaattcctg chr7:73574680-73574760 40 2.16e-05 cggtctaaaa aggggagg aaccgtcagt chr7:150019631-150019711 13 2.16e-05 tggtctaaaa aggggagg aagcctcagt chr6:2980515-2980595 25 2.16e-05 tgctctgaaa aggggagg aaccctcagt chr1:159047057-159047137 25 2.16e-05 tctgtaatca aggggagg ggttttctgg chr20:36188223-36188303 2 3.97e-05 a gggggagg aactgtgagt chr12:7261826-7261906 19 3.97e-05 GAAGGCCGGT GGGGGAGG AGGAAGTTCC chr19:50878166-50878246 22 3.97e-05 tggtctaaac gggggagg aaccctcaat chr2:208637339-208637419 30 3.97e-05 tggtctaaga gggggagg aaccctcagt chr4:184270329-184270409 5 3.97e-05 ctaa gggggagg gaccctcaat chr8:98775204-98775284 20 3.97e-05 tctaatatgg gggggagg aaccttcggt chr5:132307987-132308067 47 3.97e-05 tggtctaaag gggggagg aatgcttagt chr9:115308578-115308658 21 3.97e-05 atggtctgat gggggagg aaccctcagt chr2:26980879-26980959 18 4.84e-05 tttccaggaa aggggcgg ggatttcctg chr1:12717674-12717754 8 4.84e-05 ttaacca aggggcgg aatattcatg chr3:12824102-12824182 22 4.84e-05 tttctgggaa aggggcgg ggagttccca chr11:76622263-76622343 44 4.84e-05 tttccaggaa aggggcgg gcaattcctg chr1:160635702-160635782 22 7.18e-05 taggtcaacg aggagtgg gaggggattc chr3:196105429-196105509 1 7.18e-05 . aggagtgg attacttatg chr17:74597829-74597909 10 7.18e-05 tgctaaacg aggagtgg attattatgt chr8:17388581-17388661 20 7.18e-05 GGGAGATAAC AGGGCTGG TTTCCTGGAA chr6:15896067-15896147 45 7.18e-05 tttctgggaa aggagtgg tcaattcctg chr12:76508284-76508364 50 9.51e-05 TCCTGGAAGT AGGGCAGG GAGGGTCTCA chr12:109217708-10921778 69 9.51e-05 CTCCCTGATT AGGAGAGG GCAG chr11:57668859-57668939 58 9.51e-05 AGGCAGCTAG AGGAGAGG AGATAAGGCT chr9:138313374-138313454 3 9.51e-05 ta agggcagg aaccctcagt chr8:41630348-41630428 25 1.21e-04 CACCACTGAT AAGGGTGG GTACCAGGAA chr12:127392639-12739271 49 1.21e-04 tttccaggaa aggtgtgg gcagttcctg chr15:101137140-10113722 18 1.21e-04 tagtcaagaa aagggtgg cgccctgatt chr2:196233730-196233810 9 1.32e-04 gctaaata tggggtgg attataagtt chrX:2792474-2792554 20 1.58e-04 cctttagacc aggtgagg tctcttgata chr5:119848602-119848682 29 1.58e-04 tgctataata aagggagg ggatttcctg chr6:49907858-49907938 24 1.58e-04 cctggaaaag aggtgagg cattcctgga chr1:247531518-247531598 45 1.76e-04 ggtctgaaag tggggagg aaccctcagt chr20:23113738-23113818 49 2.02e-04 GGGGAAGGTC ATGGGTGG AGTGAGGTCA chr8:91592724-91592804 41 2.02e-04 ggtgtaaaaa atgggtgg tactacagtt chr1:22118090-22118170 11 2.02e-04 tttccgagaa agggatgg gcatttccca chr1:22014379-22014459 59 2.15e-04 TGGTGGGATG AGGGGTGT GTGTGCATGG chr11:44552082-44552162 5 2.15e-04 aaca aggggtgt attactcatg chr7:138043956-138044036 22 2.49e-04 tagtctaaaa agggaagg aaccgtcagt chr4:123828118-123828198 10 2.90e-04 ggtctaaaa cggggagg aaccctcagt chr17:25902285-25902365 33 3.10e-04 ttctgggaaa ggggcagg caattcctgg chr12:65114769-65114849 71 3.10e-04 GTTGCCAGAT GGGGCAGG TG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:45106321-45106401 1.1e-05 33_[+2]_39 chr1:8960117-8960197 1.1e-05 46_[+2]_26 chr3:88245164-88245244 1.1e-05 19_[+2]_53 chr4:74962036-74962116 1.1e-05 7_[+2]_65 chr10:45906423-45906503 1.1e-05 60_[+2]_12 chr6:147208386-147208466 1.1e-05 46_[+2]_26 chr3:196569666-196569746 1.1e-05 27_[+2]_45 chr5:125849878-125849958 1.1e-05 20_[+2]_52 chr1:100001134-100001214 1.1e-05 39_[+2]_33 chr8:27697275-27697355 1.1e-05 11_[+2]_61 chr8:144629515-144629595 1.1e-05 37_[+2]_35 chr7:157100647-157100727 1.1e-05 15_[+2]_57 chr17:60711476-60711556 1.1e-05 13_[+2]_59 chr20:2506421-2506501 1.1e-05 13_[+2]_59 chr14:70163715-70163795 1.1e-05 53_[+2]_19 chr12:32174039-32174119 1.1e-05 30_[+2]_42 chrX:109244157-109244237 1.1e-05 39_[+2]_33 chr1:110406935-110407015 1.1e-05 22_[+2]_50 chr11:118583497-11858357 1.1e-05 27_[+2]_45 chr7:32945037-32945117 1.1e-05 69_[+2]_3 chr7:143123798-143123878 2.2e-05 11_[+2]_61 chr16:20956609-20956689 2.2e-05 40_[+2]_32 chr6:74274661-74274741 2.2e-05 16_[+2]_56 chr8:41316000-41316080 2.2e-05 32_[+2]_40 chr11:100885828-10088590 2.2e-05 3_[+2]_69 chr6:20272843-20272923 2.2e-05 22_[+2]_50 chr7:73574680-73574760 2.2e-05 39_[+2]_33 chr7:150019631-150019711 2.2e-05 12_[+2]_60 chr6:2980515-2980595 2.2e-05 24_[+2]_48 chr1:159047057-159047137 2.2e-05 24_[+2]_48 chr20:36188223-36188303 4e-05 1_[+2]_71 chr12:7261826-7261906 4e-05 18_[+2]_54 chr19:50878166-50878246 4e-05 21_[+2]_51 chr2:208637339-208637419 4e-05 29_[+2]_43 chr4:184270329-184270409 4e-05 4_[+2]_68 chr8:98775204-98775284 4e-05 19_[+2]_53 chr5:132307987-132308067 4e-05 46_[+2]_26 chr9:115308578-115308658 4e-05 20_[+2]_52 chr2:26980879-26980959 4.8e-05 17_[+2]_55 chr1:12717674-12717754 4.8e-05 7_[+2]_65 chr3:12824102-12824182 4.8e-05 21_[+2]_51 chr11:76622263-76622343 4.8e-05 43_[+2]_29 chr1:160635702-160635782 7.2e-05 21_[+2]_51 chr3:196105429-196105509 7.2e-05 [+2]_72 chr17:74597829-74597909 7.2e-05 9_[+2]_63 chr8:17388581-17388661 7.2e-05 19_[+2]_53 chr6:15896067-15896147 7.2e-05 44_[+2]_28 chr12:76508284-76508364 9.5e-05 49_[+2]_23 chr12:109217708-10921778 9.5e-05 68_[+2]_4 chr11:57668859-57668939 9.5e-05 57_[+2]_15 chr9:138313374-138313454 9.5e-05 2_[+2]_70 chr8:41630348-41630428 0.00012 24_[+2]_48 chr12:127392639-12739271 0.00012 48_[+2]_24 chr15:101137140-10113722 0.00012 17_[+2]_55 chr2:196233730-196233810 0.00013 8_[+2]_64 chrX:2792474-2792554 0.00016 19_[+2]_53 chr5:119848602-119848682 0.00016 28_[+2]_44 chr6:49907858-49907938 0.00016 23_[+2]_49 chr1:247531518-247531598 0.00018 44_[+2]_28 chr20:23113738-23113818 0.0002 48_[+2]_24 chr8:91592724-91592804 0.0002 40_[+2]_32 chr1:22118090-22118170 0.0002 10_[+2]_62 chr1:22014379-22014459 0.00021 58_[+2]_14 chr11:44552082-44552162 0.00021 4_[+2]_68 chr7:138043956-138044036 0.00025 21_[+2]_51 chr4:123828118-123828198 0.00029 9_[+2]_63 chr17:25902285-25902365 0.00031 32_[+2]_40 chr12:65114769-65114849 0.00031 70_[+2]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGGGGWGG width=8 seqs=68 chr3:45106321-45106401 ( 34) AGGGGTGG 1 chr1:8960117-8960197 ( 47) AGGGGTGG 1 chr3:88245164-88245244 ( 20) AGGGGTGG 1 chr4:74962036-74962116 ( 8) AGGGGTGG 1 chr10:45906423-45906503 ( 61) AGGGGTGG 1 chr6:147208386-147208466 ( 47) AGGGGTGG 1 chr3:196569666-196569746 ( 28) AGGGGTGG 1 chr5:125849878-125849958 ( 21) AGGGGTGG 1 chr1:100001134-100001214 ( 40) AGGGGTGG 1 chr8:27697275-27697355 ( 12) AGGGGTGG 1 chr8:144629515-144629595 ( 38) AGGGGTGG 1 chr7:157100647-157100727 ( 16) AGGGGTGG 1 chr17:60711476-60711556 ( 14) AGGGGTGG 1 chr20:2506421-2506501 ( 14) AGGGGTGG 1 chr14:70163715-70163795 ( 54) AGGGGTGG 1 chr12:32174039-32174119 ( 31) AGGGGTGG 1 chrX:109244157-109244237 ( 40) AGGGGTGG 1 chr1:110406935-110407015 ( 23) AGGGGTGG 1 chr11:118583497-11858357 ( 28) AGGGGTGG 1 chr7:32945037-32945117 ( 70) AGGGGTGG 1 chr7:143123798-143123878 ( 12) AGGGGAGG 1 chr16:20956609-20956689 ( 41) AGGGGAGG 1 chr6:74274661-74274741 ( 17) AGGGGAGG 1 chr8:41316000-41316080 ( 33) AGGGGAGG 1 chr11:100885828-10088590 ( 4) AGGGGAGG 1 chr6:20272843-20272923 ( 23) AGGGGAGG 1 chr7:73574680-73574760 ( 40) AGGGGAGG 1 chr7:150019631-150019711 ( 13) AGGGGAGG 1 chr6:2980515-2980595 ( 25) AGGGGAGG 1 chr1:159047057-159047137 ( 25) AGGGGAGG 1 chr20:36188223-36188303 ( 2) GGGGGAGG 1 chr12:7261826-7261906 ( 19) GGGGGAGG 1 chr19:50878166-50878246 ( 22) GGGGGAGG 1 chr2:208637339-208637419 ( 30) GGGGGAGG 1 chr4:184270329-184270409 ( 5) GGGGGAGG 1 chr8:98775204-98775284 ( 20) GGGGGAGG 1 chr5:132307987-132308067 ( 47) GGGGGAGG 1 chr9:115308578-115308658 ( 21) GGGGGAGG 1 chr2:26980879-26980959 ( 18) AGGGGCGG 1 chr1:12717674-12717754 ( 8) AGGGGCGG 1 chr3:12824102-12824182 ( 22) AGGGGCGG 1 chr11:76622263-76622343 ( 44) AGGGGCGG 1 chr1:160635702-160635782 ( 22) AGGAGTGG 1 chr3:196105429-196105509 ( 1) AGGAGTGG 1 chr17:74597829-74597909 ( 10) AGGAGTGG 1 chr8:17388581-17388661 ( 20) AGGGCTGG 1 chr6:15896067-15896147 ( 45) AGGAGTGG 1 chr12:76508284-76508364 ( 50) AGGGCAGG 1 chr12:109217708-10921778 ( 69) AGGAGAGG 1 chr11:57668859-57668939 ( 58) AGGAGAGG 1 chr9:138313374-138313454 ( 3) AGGGCAGG 1 chr8:41630348-41630428 ( 25) AAGGGTGG 1 chr12:127392639-12739271 ( 49) AGGTGTGG 1 chr15:101137140-10113722 ( 18) AAGGGTGG 1 chr2:196233730-196233810 ( 9) TGGGGTGG 1 chrX:2792474-2792554 ( 20) AGGTGAGG 1 chr5:119848602-119848682 ( 29) AAGGGAGG 1 chr6:49907858-49907938 ( 24) AGGTGAGG 1 chr1:247531518-247531598 ( 45) TGGGGAGG 1 chr20:23113738-23113818 ( 49) ATGGGTGG 1 chr8:91592724-91592804 ( 41) ATGGGTGG 1 chr1:22118090-22118170 ( 11) AGGGATGG 1 chr1:22014379-22014459 ( 59) AGGGGTGT 1 chr11:44552082-44552162 ( 5) AGGGGTGT 1 chr7:138043956-138044036 ( 22) AGGGAAGG 1 chr4:123828118-123828198 ( 10) CGGGGAGG 1 chr17:25902285-25902365 ( 33) GGGGCAGG 1 chr12:65114769-65114849 ( 71) GGGGCAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.85972 E= 5.5e-047 156 -392 -64 -322 -263 -1273 201 -322 -1273 -1273 212 -1273 -163 -1273 192 -264 -322 -160 197 -1273 69 -192 -1273 86 -1273 -1273 212 -1273 -1273 -1273 208 -322 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 68 E= 5.5e-047 0.808824 0.014706 0.147059 0.029412 0.044118 0.000000 0.926471 0.029412 0.000000 0.000000 1.000000 0.000000 0.088235 0.000000 0.867647 0.044118 0.029412 0.073529 0.897059 0.000000 0.441176 0.058824 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.970588 0.029412 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGWGG MEME-2 regular expression -------------------------------------------------------------------------------- AGGGG[TA]GG -------------------------------------------------------------------------------- Time 8.86 secs. ******************************************************************************** ******************************************************************************** MOTIF TTCYVRGA MEME-3 width = 8 sites = 82 llr = 654 E-value = 1.4e-044 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::134:a pos.-specific C ::a53::: probability G ::::35a: matrix T aa:511:: bits 2.2 * * 2.0 *** ** 1.7 *** ** 1.5 *** ** Relative 1.3 *** ** Entropy 1.1 *** ** (11.5 bits) 0.9 *** ** 0.7 **** *** 0.4 **** *** 0.2 ******** 0.0 -------- Multilevel TTCCGGGA consensus TCA sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:196569666-196569746 71 2.41e-05 gggtgagcaa ttcccgga ac chr2:208637339-208637419 47 2.41e-05 gaaccctcag ttccggga attgcccgcc chr4:123828118-123828198 27 2.41e-05 gaaccctcag ttccggga attgcctgcc chr18:12904135-12904215 4 2.41e-05 cag ttccggga actgcccgcc chr7:130756985-130757065 6 2.41e-05 ctcag ttccggga aatctccacc chr12:94136039-94136119 43 5.39e-05 TCTTTCTTTT TTCTCGGA ATCCCTGCTC chr14:103893963-10389404 3 5.39e-05 ct ttctggga aaagggcaga chr6:20272843-20272923 14 5.39e-05 ttcatgagtt ttctggga aaggggaggg chr7:138043956-138044036 39 5.39e-05 gaaccgtcag ttctggga aatccccacc chr17:25902285-25902365 23 5.39e-05 tttgtgaatt ttctggga aaggggcagg chr11:61407737-61407817 37 5.39e-05 gcccacccct ttctggga aaactcatga chr8:42426818-42426898 32 5.39e-05 CAGCAAATCT TTCTGGGA AAGGATTTGC chr17:60711476-60711556 5 5.39e-05 agtt ttctggga aaggggtggg chr10:29101087-29101167 12 5.39e-05 gagccctcag ttctggga attgcccacc chr1:236515146-236515226 66 5.39e-05 aggtggaggt ttctcgga actgtgg chr6:2980515-2980595 42 5.39e-05 gaaccctcag ttctggga gttgtccacc chr1:159047057-159047137 37 5.39e-05 gggaggggtt ttctggga aatgggcggg chr11:61872784-61872864 12 5.39e-05 gaactctcat ttctggga attctctgac chr6:15896067-15896147 36 5.39e-05 ttcatgagtt ttctggga aaggagtggt chr15:101137140-10113722 34 5.39e-05 ggcgccctga ttctggga actgcccacc chr20:36188223-36188303 19 6.84e-05 gaactgtgag ttccagga actgcccacc chr15:91192006-91192086 11 6.84e-05 gaaccctcag ttccagga aattcccacc chr10:45906423-45906503 73 6.84e-05 gggtgggcaa ttccagga chr13:92192384-92192464 15 6.84e-05 taagtgcata ttccagga aatacttgct chr2:26980879-26980959 9 6.84e-05 catgaact ttccagga aaggggcggg chr8:144629515-144629595 29 6.84e-05 ctcatgagtt ttccagga aaggggtggg chr8:98775204-98775284 37 6.84e-05 gaaccttcgg ttccagga attgtccacc chr12:127392639-12739271 40 6.84e-05 ttcatgagtt ttccagga aaggtgtggg chr20:2506421-2506501 36 6.84e-05 ttcaggagtt ttccagga aaggggtggg chr14:70163715-70163795 45 6.84e-05 ttcattagat ttccagga aaggggtggg chr1:19133960-19134040 44 6.84e-05 ACCTCTGTGA TTCCAGGA ACTGGTAACT chr11:76622263-76622343 35 6.84e-05 tttatgagtt ttccagga aaggggcggg chr3:88245164-88245244 32 9.71e-05 gggtgggcag ttcccaga actgagggtt chr11:100885828-10088590 42 9.71e-05 acccaccctt ttcccaga aaactcatga chr1:100001134-100001214 52 9.71e-05 gggtgggcaa ttcccaga actgacggct chr11:56894348-56894428 52 9.71e-05 cacatttcat ttcccaga gcaggttaca chr6:151550599-151550679 27 9.71e-05 gcccacacct ttcccaga aaaacgcatg chr3:196105429-196105509 44 9.71e-05 ggttgggcag ttccgaga actgagggct chr4:184270329-184270409 43 9.71e-05 gcccatcctt ttcccaga aaattcatga chr1:22118090-22118170 2 9.71e-05 t ttccgaga aagggatggg chr12:32174039-32174119 43 9.71e-05 gggtgggtaa ttcccaga actgagggtt chr3:12824102-12824182 34 9.71e-05 gggcggggag ttcccaga atcatataag chr7:12787553-12787633 30 9.71e-05 acgtgggcaa ttcccaga actaagagtt chr10:106099976-10610005 51 9.71e-05 gaacctgtgc ttcccaga acgtgatatg chr2:196233730-196233810 27 1.15e-04 attataagtt ttctagga aaggggtagg chr1:110406935-110407015 14 1.15e-04 tttatgagtt ttctagga aaggggtgga chr2:192502338-192502418 6 1.15e-04 tttag ttctagga aacaggctta chr7:32945037-32945117 5 1.15e-04 aagt ttctagga aaagtaatgc chr5:133298951-133299031 27 1.51e-04 ttcctaactt ttctgaga aaaattaaaa chr6:15018792-15018872 17 1.51e-04 gaaagaagcc ttctcaga acttccctta chr1:191858328-191858408 26 1.51e-04 GAGATATGTC TTCTCAGA ACTCATATCT chr10:48402562-48402642 10 1.51e-04 GCACTTGAA TTCTCAGA ACTCCAAGTA chr11:45856113-45856193 62 1.51e-04 CAGCAGAACA TTCTCAGA AGGCTTCTAG chr19:50878166-50878246 39 1.51e-04 gaaccctcaa ttctgaga attgcctacc chr9:101614067-101614147 16 1.51e-04 ttcatgagtt ttctgaga aaggggcgag chr10:3969075-3969155 31 1.51e-04 CGGAAGAAAA TTCTCAGA GTTTTCAGTG chr1:12717674-12717754 51 1.51e-04 tggcggagtt ttctcaga actgtggtgg chrX:109244157-109244237 52 1.51e-04 gggtgggcaa ttctcaga actgagggtt chr5:64372456-64372536 3 1.51e-04 AA TTCTCAGA ACTCATAATC chr2:217745550-217745630 24 1.51e-04 CCCCTTCAAG TTCTCAGA ACTGGCTCCC chr3:185191396-185191476 39 1.51e-04 ACGCCCAGAG TTCTGAGA AAACGGAAGA chr3:50649420-50649500 7 1.68e-04 ACAGAT TTCCAAGA ACTTTCCAGG chr9:115308578-115308658 38 1.68e-04 gaaccctcag ttccaaga attccctgcc chr12:93964643-93964723 40 2.04e-04 TCCTGGAAAG TTCCTGGA AAGCCGCCTC chr6:49907858-49907938 12 2.04e-04 attcatgaac ttcctgga aaagaggtga chr11:19996531-19996611 18 2.04e-04 GGTTTGAGAA TTCCTGGA TATCAGTCCA chr9:77666395-77666475 6 2.22e-04 ATTGG TTCTTGGA TTCTGAACTG chr8:27697275-27697355 55 2.22e-04 agatggagat ttcttgga actgtggtgc chr2:47525390-47525470 55 2.22e-04 gcccacctct ttcttgga aaattcatga chr11:57668859-57668939 29 2.52e-04 ACAGATCATC TTCAGGGA TTTCTCAGAA chr9:138313374-138313454 20 2.52e-04 gaaccctcag ttcaggga aatctccacc chr3:129418261-129418341 19 2.52e-04 gaaccttgag ttcaggga attgcccacc chrX:2792474-2792554 47 2.70e-04 aacattttct ttcctaga attgataacc chr10:11752852-11752932 38 3.73e-04 agtagtcaaa ttcacaga aacagaaagg chr1:181875273-181875353 58 3.73e-04 gggggaaacc ttcacaga ataaatttat chr12:57092924-57093004 36 3.73e-04 ggcatggcaa ttccctga actgaaggct chr2:119496762-119496842 24 3.73e-04 aaaaatgagg ttcagaga gataaggttt chr7:150019631-150019711 51 4.09e-04 gcccacccct ttctctga aactcatgaa chr7:143123798-143123878 63 4.48e-04 CACTCATGAT TTCAAAGA GCTCACCCTA chr9:96873345-96873425 39 4.48e-04 TCGTTCTGGA TTCCATGA AAACCACCAT chr4:129438357-129438437 59 4.48e-04 GGAAAGAGGT TTCCATGA ATTGCCTCAT chr2:39666903-39666983 16 4.70e-04 AGCTTCCCTC TTCTATGA ttagaagcat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:196569666-196569746 2.4e-05 70_[+3]_2 chr2:208637339-208637419 2.4e-05 46_[+3]_26 chr4:123828118-123828198 2.4e-05 26_[+3]_46 chr18:12904135-12904215 2.4e-05 3_[+3]_69 chr7:130756985-130757065 2.4e-05 5_[+3]_67 chr12:94136039-94136119 5.4e-05 42_[+3]_30 chr14:103893963-10389404 5.4e-05 2_[+3]_70 chr6:20272843-20272923 5.4e-05 13_[+3]_59 chr7:138043956-138044036 5.4e-05 38_[+3]_34 chr17:25902285-25902365 5.4e-05 22_[+3]_50 chr11:61407737-61407817 5.4e-05 36_[+3]_36 chr8:42426818-42426898 5.4e-05 31_[+3]_41 chr17:60711476-60711556 5.4e-05 4_[+3]_68 chr10:29101087-29101167 5.4e-05 11_[+3]_61 chr1:236515146-236515226 5.4e-05 65_[+3]_7 chr6:2980515-2980595 5.4e-05 41_[+3]_31 chr1:159047057-159047137 5.4e-05 36_[+3]_36 chr11:61872784-61872864 5.4e-05 11_[+3]_61 chr6:15896067-15896147 5.4e-05 35_[+3]_37 chr15:101137140-10113722 5.4e-05 33_[+3]_39 chr20:36188223-36188303 6.8e-05 18_[+3]_54 chr15:91192006-91192086 6.8e-05 10_[+3]_62 chr10:45906423-45906503 6.8e-05 72_[+3] chr13:92192384-92192464 6.8e-05 14_[+3]_58 chr2:26980879-26980959 6.8e-05 8_[+3]_64 chr8:144629515-144629595 6.8e-05 28_[+3]_44 chr8:98775204-98775284 6.8e-05 36_[+3]_36 chr12:127392639-12739271 6.8e-05 39_[+3]_33 chr20:2506421-2506501 6.8e-05 35_[+3]_37 chr14:70163715-70163795 6.8e-05 44_[+3]_28 chr1:19133960-19134040 6.8e-05 43_[+3]_29 chr11:76622263-76622343 6.8e-05 34_[+3]_38 chr3:88245164-88245244 9.7e-05 31_[+3]_41 chr11:100885828-10088590 9.7e-05 41_[+3]_31 chr1:100001134-100001214 9.7e-05 51_[+3]_21 chr11:56894348-56894428 9.7e-05 51_[+3]_21 chr6:151550599-151550679 9.7e-05 26_[+3]_46 chr3:196105429-196105509 9.7e-05 43_[+3]_29 chr4:184270329-184270409 9.7e-05 42_[+3]_30 chr1:22118090-22118170 9.7e-05 1_[+3]_71 chr12:32174039-32174119 9.7e-05 42_[+3]_30 chr3:12824102-12824182 9.7e-05 33_[+3]_39 chr7:12787553-12787633 9.7e-05 29_[+3]_43 chr10:106099976-10610005 9.7e-05 50_[+3]_22 chr2:196233730-196233810 0.00012 26_[+3]_46 chr1:110406935-110407015 0.00012 13_[+3]_59 chr2:192502338-192502418 0.00012 5_[+3]_67 chr7:32945037-32945117 0.00012 4_[+3]_68 chr5:133298951-133299031 0.00015 26_[+3]_46 chr6:15018792-15018872 0.00015 16_[+3]_56 chr1:191858328-191858408 0.00015 25_[+3]_47 chr10:48402562-48402642 0.00015 9_[+3]_63 chr11:45856113-45856193 0.00015 61_[+3]_11 chr19:50878166-50878246 0.00015 38_[+3]_34 chr9:101614067-101614147 0.00015 15_[+3]_57 chr10:3969075-3969155 0.00015 30_[+3]_42 chr1:12717674-12717754 0.00015 50_[+3]_22 chrX:109244157-109244237 0.00015 51_[+3]_21 chr5:64372456-64372536 0.00015 2_[+3]_70 chr2:217745550-217745630 0.00015 23_[+3]_49 chr3:185191396-185191476 0.00015 38_[+3]_34 chr3:50649420-50649500 0.00017 6_[+3]_66 chr9:115308578-115308658 0.00017 37_[+3]_35 chr12:93964643-93964723 0.0002 39_[+3]_33 chr6:49907858-49907938 0.0002 11_[+3]_61 chr11:19996531-19996611 0.0002 17_[+3]_55 chr9:77666395-77666475 0.00022 5_[+3]_67 chr8:27697275-27697355 0.00022 54_[+3]_18 chr2:47525390-47525470 0.00022 54_[+3]_18 chr11:57668859-57668939 0.00025 28_[+3]_44 chr9:138313374-138313454 0.00025 19_[+3]_53 chr3:129418261-129418341 0.00025 18_[+3]_54 chrX:2792474-2792554 0.00027 46_[+3]_26 chr10:11752852-11752932 0.00037 37_[+3]_35 chr1:181875273-181875353 0.00037 57_[+3]_15 chr12:57092924-57093004 0.00037 35_[+3]_37 chr2:119496762-119496842 0.00037 23_[+3]_49 chr7:150019631-150019711 0.00041 50_[+3]_22 chr7:143123798-143123878 0.00045 62_[+3]_10 chr9:96873345-96873425 0.00045 38_[+3]_34 chr4:129438357-129438437 0.00045 58_[+3]_14 chr2:39666903-39666983 0.00047 15_[+3]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTCYVRGA width=8 seqs=82 chr3:196569666-196569746 ( 71) TTCCCGGA 1 chr2:208637339-208637419 ( 47) TTCCGGGA 1 chr4:123828118-123828198 ( 27) TTCCGGGA 1 chr18:12904135-12904215 ( 4) TTCCGGGA 1 chr7:130756985-130757065 ( 6) TTCCGGGA 1 chr12:94136039-94136119 ( 43) TTCTCGGA 1 chr14:103893963-10389404 ( 3) TTCTGGGA 1 chr6:20272843-20272923 ( 14) TTCTGGGA 1 chr7:138043956-138044036 ( 39) TTCTGGGA 1 chr17:25902285-25902365 ( 23) TTCTGGGA 1 chr11:61407737-61407817 ( 37) TTCTGGGA 1 chr8:42426818-42426898 ( 32) TTCTGGGA 1 chr17:60711476-60711556 ( 5) TTCTGGGA 1 chr10:29101087-29101167 ( 12) TTCTGGGA 1 chr1:236515146-236515226 ( 66) TTCTCGGA 1 chr6:2980515-2980595 ( 42) TTCTGGGA 1 chr1:159047057-159047137 ( 37) TTCTGGGA 1 chr11:61872784-61872864 ( 12) TTCTGGGA 1 chr6:15896067-15896147 ( 36) TTCTGGGA 1 chr15:101137140-10113722 ( 34) TTCTGGGA 1 chr20:36188223-36188303 ( 19) TTCCAGGA 1 chr15:91192006-91192086 ( 11) TTCCAGGA 1 chr10:45906423-45906503 ( 73) TTCCAGGA 1 chr13:92192384-92192464 ( 15) TTCCAGGA 1 chr2:26980879-26980959 ( 9) TTCCAGGA 1 chr8:144629515-144629595 ( 29) TTCCAGGA 1 chr8:98775204-98775284 ( 37) TTCCAGGA 1 chr12:127392639-12739271 ( 40) TTCCAGGA 1 chr20:2506421-2506501 ( 36) TTCCAGGA 1 chr14:70163715-70163795 ( 45) TTCCAGGA 1 chr1:19133960-19134040 ( 44) TTCCAGGA 1 chr11:76622263-76622343 ( 35) TTCCAGGA 1 chr3:88245164-88245244 ( 32) TTCCCAGA 1 chr11:100885828-10088590 ( 42) TTCCCAGA 1 chr1:100001134-100001214 ( 52) TTCCCAGA 1 chr11:56894348-56894428 ( 52) TTCCCAGA 1 chr6:151550599-151550679 ( 27) TTCCCAGA 1 chr3:196105429-196105509 ( 44) TTCCGAGA 1 chr4:184270329-184270409 ( 43) TTCCCAGA 1 chr1:22118090-22118170 ( 2) TTCCGAGA 1 chr12:32174039-32174119 ( 43) TTCCCAGA 1 chr3:12824102-12824182 ( 34) TTCCCAGA 1 chr7:12787553-12787633 ( 30) TTCCCAGA 1 chr10:106099976-10610005 ( 51) TTCCCAGA 1 chr2:196233730-196233810 ( 27) TTCTAGGA 1 chr1:110406935-110407015 ( 14) TTCTAGGA 1 chr2:192502338-192502418 ( 6) TTCTAGGA 1 chr7:32945037-32945117 ( 5) TTCTAGGA 1 chr5:133298951-133299031 ( 27) TTCTGAGA 1 chr6:15018792-15018872 ( 17) TTCTCAGA 1 chr1:191858328-191858408 ( 26) TTCTCAGA 1 chr10:48402562-48402642 ( 10) TTCTCAGA 1 chr11:45856113-45856193 ( 62) TTCTCAGA 1 chr19:50878166-50878246 ( 39) TTCTGAGA 1 chr9:101614067-101614147 ( 16) TTCTGAGA 1 chr10:3969075-3969155 ( 31) TTCTCAGA 1 chr1:12717674-12717754 ( 51) TTCTCAGA 1 chrX:109244157-109244237 ( 52) TTCTCAGA 1 chr5:64372456-64372536 ( 3) TTCTCAGA 1 chr2:217745550-217745630 ( 24) TTCTCAGA 1 chr3:185191396-185191476 ( 39) TTCTGAGA 1 chr3:50649420-50649500 ( 7) TTCCAAGA 1 chr9:115308578-115308658 ( 38) TTCCAAGA 1 chr12:93964643-93964723 ( 40) TTCCTGGA 1 chr6:49907858-49907938 ( 12) TTCCTGGA 1 chr11:19996531-19996611 ( 18) TTCCTGGA 1 chr9:77666395-77666475 ( 6) TTCTTGGA 1 chr8:27697275-27697355 ( 55) TTCTTGGA 1 chr2:47525390-47525470 ( 55) TTCTTGGA 1 chr11:57668859-57668939 ( 29) TTCAGGGA 1 chr9:138313374-138313454 ( 20) TTCAGGGA 1 chr3:129418261-129418341 ( 19) TTCAGGGA 1 chrX:2792474-2792554 ( 47) TTCCTAGA 1 chr10:11752852-11752932 ( 38) TTCACAGA 1 chr1:181875273-181875353 ( 58) TTCACAGA 1 chr12:57092924-57093004 ( 36) TTCCCTGA 1 chr2:119496762-119496842 ( 24) TTCAGAGA 1 chr7:150019631-150019711 ( 51) TTCTCTGA 1 chr7:143123798-143123878 ( 63) TTCAAAGA 1 chr9:96873345-96873425 ( 39) TTCCATGA 1 chr4:129438357-129438437 ( 59) TTCCATGA 1 chr2:39666903-39666983 ( 16) TTCTATGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.2538 E= 1.4e-044 -1300 -1300 -1300 186 -1300 -1300 -1300 186 -1300 217 -1300 -1300 -168 106 -1300 72 -3 51 52 -169 51 -1300 126 -217 -1300 -1300 212 -1300 187 -1300 -1300 -1300 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 82 E= 1.4e-044 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.085366 0.463415 0.000000 0.451220 0.268293 0.317073 0.329268 0.085366 0.390244 0.000000 0.548780 0.060976 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCYVRGA MEME-3 regular expression -------------------------------------------------------------------------------- TTC[CT][GCA][GA]GA -------------------------------------------------------------------------------- Time 12.16 secs. ******************************************************************************** ******************************************************************************** MOTIF YCCWCCCC MEME-4 width = 8 sites = 55 llr = 483 E-value = 8.6e-035 ******************************************************************************** -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::14:::: pos.-specific C 5a9:a998 probability G :::::::: matrix T 5::6:112 bits 2.2 * 2.0 * * 1.7 ** *** 1.5 ** **** Relative 1.3 ** **** Entropy 1.1 *** **** (12.7 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCCTCCCC consensus C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:88245164-88245244 49 1.64e-05 aactgagggt tcctcccc ttgttagacc chr8:56852636-56852716 50 1.64e-05 TTAGTACAAT TCCTCCCC CACGAGATAT chr14:103893963-10389404 41 1.64e-05 aactgaaggt ccctcccc ttttagggga chr8:41316000-41316080 62 1.64e-05 ccaggaattc ccctcccc tttcctggga chr6:20272843-20272923 52 1.64e-05 aactgaagat tcctcccc cttttagaca chr17:25902285-25902365 61 1.64e-05 aactgagggc ccctcccc ctctttagac chr12:66696193-66696273 3 1.64e-05 TG CCCTCCCC TCGGCAATTC chr5:125849878-125849958 50 1.64e-05 aattgagagt tcctcccc ttgtagacca chr19:45091217-45091297 28 1.64e-05 aactgagggt tcctcccc tttttagacc chr12:57092924-57093004 53 1.64e-05 aactgaaggc tcctcccc tttttagact chr1:100001134-100001214 69 1.64e-05 aactgacggc tcctcccc tttt chr2:26980879-26980959 47 1.64e-05 aagtgagtgt tcctcccc ctttctgacc chr8:144629515-144629595 66 1.64e-05 gaacggattg tcctcccc ctttcag chr17:74597829-74597909 67 1.64e-05 aaatgaggtt tcctcccc ctttta chr1:22118090-22118170 40 1.64e-05 aactgagagt tcctcccc tttttagacc chrX:109244157-109244237 69 1.64e-05 aactgagggt tcctcccc cttt chr7:12787553-12787633 47 1.64e-05 aactaagagt tcctcccc ttttcagacc chr11:75401493-75401573 34 3.26e-05 tcatgaatat tccacccc ctggttaaag chr20:36188223-36188303 31 3.26e-05 ccaggaactg cccacccc tttcctggaa chr15:91192006-91192086 23 3.26e-05 ccaggaaatt cccacccc attcctggaa chr16:20956609-20956689 70 3.26e-05 cttggaattg cccacccc ttt chr6:74274661-74274741 46 3.26e-05 ccggaaactg cccacccc tttcctggaa chr11:61407737-61407817 28 3.26e-05 ccaggaattg cccacccc tttctgggaa chr8:98775204-98775284 49 3.26e-05 ccaggaattg tccacccc tttcctggaa chr7:150019631-150019711 42 3.26e-05 ccgggaactg cccacccc tttctctgaa chr10:29101087-29101167 24 3.26e-05 ctgggaattg cccacccc tttccgggaa chr9:138313374-138313454 32 3.26e-05 cagggaaatc tccacccc tttcctggaa chr3:129418261-129418341 31 3.26e-05 cagggaattg cccacccc tttctcagaa chr2:217745550-217745630 10 3.26e-05 TTCTGCTTC CCCACCCC TTCAAGTTCT chr7:130756985-130757065 49 3.26e-05 tcatgaataa tccacccc ttgtttagca chr2:127402973-127403053 21 5.29e-05 TGATAAGGTC TCCTCCCT TGCCTGGAGG chr3:150169156-150169236 22 5.29e-05 CTAAGAGGTT CCCTCCCT TATTCTCAGA chr1:19133960-19134040 13 5.29e-05 TCCTGGAACG CCCTCCCT CACCCCTAAA chr11:76622263-76622343 73 5.29e-05 aactgagggt tcctccct chr11:118583497-11858357 57 5.29e-05 aactgagggt tcctccct ctttttaaac chr8:41630348-41630428 44 7.30e-05 TACCAGGAAC TCCACCCT TTACCGAGAA chr11:100885828-10088590 33 7.30e-05 ctgggaatta cccaccct tttcccagaa chr1:40849400-40849480 19 7.30e-05 AAAATAAGTT CCCACCCT GTCAATTCTG chr7:138043956-138044036 51 7.30e-05 ctgggaaatc cccaccct tttcctggaa chr11:13112075-13112155 31 9.33e-05 tcctggaact ccctcctc ttgccctttc chr1:181875273-181875353 24 9.33e-05 tgataagagt ccctcctc ttcttttcct chr3:196105429-196105509 61 9.33e-05 aactgagggc tcctcctc ctttttagac chr1:110406935-110407015 52 9.33e-05 aaccaaaggt tcctcctc tttttagacc chr7:129772266-129772346 41 1.54e-04 CCTTATCATA CCATCCCC TCTGTGATGG chr3:172109577-172109657 43 1.54e-04 AAGTTGCAAA TCATCCCC TTCATGAACG chr2:47525390-47525470 46 1.54e-04 ccaggaattg cccacctc tttcttggaa chr6:2980515-2980595 54 1.54e-04 ctgggagttg tccacctc tttcccggaa chr12:32174039-32174119 60 1.54e-04 aactgagggt tcctctcc tttttagacc chr5:64372456-64372536 49 1.54e-04 TACAACGAAA CCATCCCC AAGCAGGGGA chr15:101137140-10113722 65 1.54e-04 ttcctggaaa ccctctcc tttcatca chr11:35364980-35365060 13 1.94e-04 tcatgaatat tccactcc ttggttaaag chr6:151550599-151550679 50 1.94e-04 gcatgaataa tccactcc ttgttaagca chr4:184270329-184270409 65 1.94e-04 tcatgaataa tcaacccc ttatctgg chr10:11183663-11183743 64 2.11e-04 tagacctggt tcctgccc tcaagacat chr9:115308578-115308658 49 2.11e-04 tccaagaatt ccctgccc ctttcctaga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:88245164-88245244 1.6e-05 48_[+4]_24 chr8:56852636-56852716 1.6e-05 49_[+4]_23 chr14:103893963-10389404 1.6e-05 40_[+4]_32 chr8:41316000-41316080 1.6e-05 61_[+4]_11 chr6:20272843-20272923 1.6e-05 51_[+4]_21 chr17:25902285-25902365 1.6e-05 60_[+4]_12 chr12:66696193-66696273 1.6e-05 2_[+4]_70 chr5:125849878-125849958 1.6e-05 49_[+4]_23 chr19:45091217-45091297 1.6e-05 27_[+4]_45 chr12:57092924-57093004 1.6e-05 52_[+4]_20 chr1:100001134-100001214 1.6e-05 68_[+4]_4 chr2:26980879-26980959 1.6e-05 46_[+4]_26 chr8:144629515-144629595 1.6e-05 65_[+4]_7 chr17:74597829-74597909 1.6e-05 66_[+4]_6 chr1:22118090-22118170 1.6e-05 39_[+4]_33 chrX:109244157-109244237 1.6e-05 68_[+4]_4 chr7:12787553-12787633 1.6e-05 46_[+4]_26 chr11:75401493-75401573 3.3e-05 33_[+4]_39 chr20:36188223-36188303 3.3e-05 30_[+4]_42 chr15:91192006-91192086 3.3e-05 22_[+4]_50 chr16:20956609-20956689 3.3e-05 69_[+4]_3 chr6:74274661-74274741 3.3e-05 45_[+4]_27 chr11:61407737-61407817 3.3e-05 27_[+4]_45 chr8:98775204-98775284 3.3e-05 48_[+4]_24 chr7:150019631-150019711 3.3e-05 41_[+4]_31 chr10:29101087-29101167 3.3e-05 23_[+4]_49 chr9:138313374-138313454 3.3e-05 31_[+4]_41 chr3:129418261-129418341 3.3e-05 30_[+4]_42 chr2:217745550-217745630 3.3e-05 9_[+4]_63 chr7:130756985-130757065 3.3e-05 48_[+4]_24 chr2:127402973-127403053 5.3e-05 20_[+4]_52 chr3:150169156-150169236 5.3e-05 21_[+4]_51 chr1:19133960-19134040 5.3e-05 12_[+4]_60 chr11:76622263-76622343 5.3e-05 72_[+4] chr11:118583497-11858357 5.3e-05 56_[+4]_16 chr8:41630348-41630428 7.3e-05 43_[+4]_29 chr11:100885828-10088590 7.3e-05 32_[+4]_40 chr1:40849400-40849480 7.3e-05 18_[+4]_54 chr7:138043956-138044036 7.3e-05 50_[+4]_22 chr11:13112075-13112155 9.3e-05 30_[+4]_42 chr1:181875273-181875353 9.3e-05 23_[+4]_49 chr3:196105429-196105509 9.3e-05 60_[+4]_12 chr1:110406935-110407015 9.3e-05 51_[+4]_21 chr7:129772266-129772346 0.00015 40_[+4]_32 chr3:172109577-172109657 0.00015 42_[+4]_30 chr2:47525390-47525470 0.00015 45_[+4]_27 chr6:2980515-2980595 0.00015 53_[+4]_19 chr12:32174039-32174119 0.00015 59_[+4]_13 chr5:64372456-64372536 0.00015 48_[+4]_24 chr15:101137140-10113722 0.00015 64_[+4]_8 chr11:35364980-35365060 0.00019 12_[+4]_60 chr6:151550599-151550679 0.00019 49_[+4]_23 chr4:184270329-184270409 0.00019 64_[+4]_8 chr10:11183663-11183743 0.00021 63_[+4]_9 chr9:115308578-115308658 0.00021 48_[+4]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YCCWCCCC width=8 seqs=55 chr3:88245164-88245244 ( 49) TCCTCCCC 1 chr8:56852636-56852716 ( 50) TCCTCCCC 1 chr14:103893963-10389404 ( 41) CCCTCCCC 1 chr8:41316000-41316080 ( 62) CCCTCCCC 1 chr6:20272843-20272923 ( 52) TCCTCCCC 1 chr17:25902285-25902365 ( 61) CCCTCCCC 1 chr12:66696193-66696273 ( 3) CCCTCCCC 1 chr5:125849878-125849958 ( 50) TCCTCCCC 1 chr19:45091217-45091297 ( 28) TCCTCCCC 1 chr12:57092924-57093004 ( 53) TCCTCCCC 1 chr1:100001134-100001214 ( 69) TCCTCCCC 1 chr2:26980879-26980959 ( 47) TCCTCCCC 1 chr8:144629515-144629595 ( 66) TCCTCCCC 1 chr17:74597829-74597909 ( 67) TCCTCCCC 1 chr1:22118090-22118170 ( 40) TCCTCCCC 1 chrX:109244157-109244237 ( 69) TCCTCCCC 1 chr7:12787553-12787633 ( 47) TCCTCCCC 1 chr11:75401493-75401573 ( 34) TCCACCCC 1 chr20:36188223-36188303 ( 31) CCCACCCC 1 chr15:91192006-91192086 ( 23) CCCACCCC 1 chr16:20956609-20956689 ( 70) CCCACCCC 1 chr6:74274661-74274741 ( 46) CCCACCCC 1 chr11:61407737-61407817 ( 28) CCCACCCC 1 chr8:98775204-98775284 ( 49) TCCACCCC 1 chr7:150019631-150019711 ( 42) CCCACCCC 1 chr10:29101087-29101167 ( 24) CCCACCCC 1 chr9:138313374-138313454 ( 32) TCCACCCC 1 chr3:129418261-129418341 ( 31) CCCACCCC 1 chr2:217745550-217745630 ( 10) CCCACCCC 1 chr7:130756985-130757065 ( 49) TCCACCCC 1 chr2:127402973-127403053 ( 21) TCCTCCCT 1 chr3:150169156-150169236 ( 22) CCCTCCCT 1 chr1:19133960-19134040 ( 13) CCCTCCCT 1 chr11:76622263-76622343 ( 73) TCCTCCCT 1 chr11:118583497-11858357 ( 57) TCCTCCCT 1 chr8:41630348-41630428 ( 44) TCCACCCT 1 chr11:100885828-10088590 ( 33) CCCACCCT 1 chr1:40849400-40849480 ( 19) CCCACCCT 1 chr7:138043956-138044036 ( 51) CCCACCCT 1 chr11:13112075-13112155 ( 31) CCCTCCTC 1 chr1:181875273-181875353 ( 24) CCCTCCTC 1 chr3:196105429-196105509 ( 61) TCCTCCTC 1 chr1:110406935-110407015 ( 52) TCCTCCTC 1 chr7:129772266-129772346 ( 41) CCATCCCC 1 chr3:172109577-172109657 ( 43) TCATCCCC 1 chr2:47525390-47525470 ( 46) CCCACCTC 1 chr6:2980515-2980595 ( 54) TCCACCTC 1 chr12:32174039-32174119 ( 60) TCCTCTCC 1 chr5:64372456-64372536 ( 49) CCATCCCC 1 chr15:101137140-10113722 ( 65) CCCTCTCC 1 chr11:35364980-35365060 ( 13) TCCACTCC 1 chr6:151550599-151550679 ( 50) TCCACTCC 1 chr4:184270329-184270409 ( 65) TCAACCCC 1 chr10:11183663-11183743 ( 64) TCCTGCCC 1 chr9:115308578-115308658 ( 49) CCCTGCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.58084 E= 8.6e-035 -1243 103 -1243 99 -1243 217 -1243 -1243 -191 206 -1243 -1243 55 -1243 -1243 113 -1243 211 -266 -1243 -1243 206 -1243 -192 -1243 200 -1243 -133 -1243 191 -1243 -75 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 55 E= 8.6e-035 0.000000 0.454545 0.000000 0.545455 0.000000 1.000000 0.000000 0.000000 0.072727 0.927273 0.000000 0.000000 0.400000 0.000000 0.000000 0.600000 0.000000 0.963636 0.036364 0.000000 0.000000 0.927273 0.000000 0.072727 0.000000 0.890909 0.000000 0.109091 0.000000 0.836364 0.000000 0.163636 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YCCWCCCC MEME-4 regular expression -------------------------------------------------------------------------------- [TC]CC[TA]CCCC -------------------------------------------------------------------------------- Time 15.29 secs. ******************************************************************************** ******************************************************************************** MOTIF AYTCATGA MEME-5 width = 8 sites = 55 llr = 482 E-value = 3.9e-033 ******************************************************************************** -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a1::a:1a pos.-specific C :5:9:::: probability G :::::18: matrix T :5a1:91: bits 2.2 2.0 * * * * 1.7 * *** * 1.5 * **** * Relative 1.3 * ****** Entropy 1.1 * ****** (12.7 bits) 0.9 * ****** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATTCATGA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:36188223-36188303 50 1.74e-05 ttcctggaaa actcatga ataatccatg chr7:143123798-143123878 54 1.74e-05 ACAGTGTTTC ACTCATGA TTTCAAAGAG chr6:74274661-74274741 65 1.74e-05 ttcctggaaa actcatga ataagaca chr11:100885828-10088590 52 1.74e-05 ttcccagaaa actcatga ataacacacc chr11:61407737-61407817 47 1.74e-05 ttctgggaaa actcatga ataactcact chr19:50878166-50878246 70 1.74e-05 ttcctggaaa actcatga ata chr4:123828118-123828198 58 1.74e-05 ttcctggaaa actcatga ataagccaac chr8:144629515-144629595 18 1.74e-05 gcagtggatt actcatga gttttccagg chr8:98775204-98775284 68 1.74e-05 ttcctggaaa actcatga ataat chr7:150019631-150019711 60 1.74e-05 tttctctgaa actcatga ataattcaac chr6:2980515-2980595 73 1.74e-05 ttcccggaaa actcatga chr9:138313374-138313454 51 1.74e-05 ttcctggaaa actcatga ataactcacc chr11:44552082-44552162 16 1.74e-05 ggggtgtatt actcatga gttttctggg chr7:130756985-130757065 37 1.74e-05 ttcctggaaa actcatga ataatccacc chr3:45106321-45106401 45 3.89e-05 ggggtggatt attcatga cttttccagg chr1:8960117-8960197 28 3.89e-05 GTTGCAGGTG attcatga gtttccagga chr10:45906423-45906503 41 3.89e-05 tgagtggatt attcatga gttttccagg chr6:20272843-20272923 3 3.89e-05 tt attcatga gttttctggg chr3:151961291-151961371 1 3.89e-05 . ATTCATGA GAAAGGAAGT chr5:125849878-125849958 1 3.89e-05 . attcatga gttttcagga chr2:47525390-47525470 65 3.89e-05 ttcttggaaa attcatga atactcca chr7:157100647-157100727 27 3.89e-05 ggggtggatt attcatga gttttcttca chr9:101614067-101614147 5 3.89e-05 gatg attcatga gttttctgag chr4:184270329-184270409 53 3.89e-05 ttcccagaaa attcatga ataatcaacc chr6:49907858-49907938 2 3.89e-05 t attcatga acttcctgga chr1:12717674-12717754 19 3.89e-05 ggggcggaat attcatga aaattcctgg chr12:127392639-12739271 29 3.89e-05 ggtgtggatc attcatga gttttccagg chr1:236515146-236515226 34 3.89e-05 ggggctgaat attcatga gaattcctgg chr12:32174039-32174119 11 3.89e-05 gaagtggatt attcatga gttttctggg chrX:109244157-109244237 20 3.89e-05 ggggtggatt attcatga gttttctggg chr11:61872784-61872864 43 3.89e-05 ttcctggaaa attcatga ataagccacc chr6:15896067-15896147 25 3.89e-05 ggggcagatt attcatga gttttctggg chr11:118583497-11858357 8 3.89e-05 atagatt attcatga gttttcgggg chr9:130841395-130841475 59 9.62e-05 TGAGGAGATA AATCATGA CTCATTTTCT chr2:64582034-64582114 50 9.62e-05 ACTTCTGCAT ACTCAGGA TTACACGCAT chr7:138043956-138044036 70 9.62e-05 ttcctggaaa aatcatga ata chr2:39666903-39666983 59 9.62e-05 aatcttttta actcagga actgcttcta chr3:196105429-196105509 12 9.62e-05 ggagtggatt acttatga gttttccagg chr2:101508785-101508865 48 9.62e-05 GGAAAAAGGA AATCATGA AGGAGGAACC chr9:115308578-115308658 69 9.62e-05 ttcctagaaa acttatga ataa chr12:46613762-46613842 59 1.61e-04 ATCACAGACG ACTCATAA ACTAGCAATA chr5:133298951-133299031 73 1.61e-04 agaattctag actcataa chr15:91192006-91192086 42 1.61e-04 ttcctggaaa actcataa ataatccact chr12:57092924-57093004 5 1.61e-04 gatt atttatga gctttctggg chr1:100001134-100001214 20 1.61e-04 agggtgggtt attcagga gttttctggg chr8:27697275-27697355 23 1.61e-04 ggggtggaat atttatga caattcttgg chr20:2506421-2506501 25 1.61e-04 ggggtggatt attcagga gttttccagg chr5:64372456-64372536 11 1.61e-04 AATTCTCAGA ACTCATAA TCTCATTTCT chr1:110406935-110407015 3 1.61e-04 tt atttatga gttttctagg chr11:76622263-76622343 24 1.61e-04 ggagtgagtt atttatga gttttccagg chr6:147208386-147208466 27 1.87e-04 ggggcagatt attcataa gttttccagg chr4:38860605-38860685 45 2.08e-04 ccaagtatta actcatta aggtgctgtg chr10:29101087-29101167 43 2.08e-04 ttccgggaaa actcatta attatctact chr3:129418261-129418341 50 2.08e-04 ttctcagaaa actcatta gtattccacc chr14:70163715-70163795 34 2.34e-04 gaggtggatt attcatta gatttccagg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:36188223-36188303 1.7e-05 49_[+5]_23 chr7:143123798-143123878 1.7e-05 53_[+5]_19 chr6:74274661-74274741 1.7e-05 64_[+5]_8 chr11:100885828-10088590 1.7e-05 51_[+5]_21 chr11:61407737-61407817 1.7e-05 46_[+5]_26 chr19:50878166-50878246 1.7e-05 69_[+5]_3 chr4:123828118-123828198 1.7e-05 57_[+5]_15 chr8:144629515-144629595 1.7e-05 17_[+5]_55 chr8:98775204-98775284 1.7e-05 67_[+5]_5 chr7:150019631-150019711 1.7e-05 59_[+5]_13 chr6:2980515-2980595 1.7e-05 72_[+5] chr9:138313374-138313454 1.7e-05 50_[+5]_22 chr11:44552082-44552162 1.7e-05 15_[+5]_57 chr7:130756985-130757065 1.7e-05 36_[+5]_36 chr3:45106321-45106401 3.9e-05 44_[+5]_28 chr1:8960117-8960197 3.9e-05 27_[+5]_45 chr10:45906423-45906503 3.9e-05 40_[+5]_32 chr6:20272843-20272923 3.9e-05 2_[+5]_70 chr3:151961291-151961371 3.9e-05 [+5]_72 chr5:125849878-125849958 3.9e-05 [+5]_72 chr2:47525390-47525470 3.9e-05 64_[+5]_8 chr7:157100647-157100727 3.9e-05 26_[+5]_46 chr9:101614067-101614147 3.9e-05 4_[+5]_68 chr4:184270329-184270409 3.9e-05 52_[+5]_20 chr6:49907858-49907938 3.9e-05 1_[+5]_71 chr1:12717674-12717754 3.9e-05 18_[+5]_54 chr12:127392639-12739271 3.9e-05 28_[+5]_44 chr1:236515146-236515226 3.9e-05 33_[+5]_39 chr12:32174039-32174119 3.9e-05 10_[+5]_62 chrX:109244157-109244237 3.9e-05 19_[+5]_53 chr11:61872784-61872864 3.9e-05 42_[+5]_30 chr6:15896067-15896147 3.9e-05 24_[+5]_48 chr11:118583497-11858357 3.9e-05 7_[+5]_65 chr9:130841395-130841475 9.6e-05 58_[+5]_14 chr2:64582034-64582114 9.6e-05 49_[+5]_23 chr7:138043956-138044036 9.6e-05 69_[+5]_3 chr2:39666903-39666983 9.6e-05 58_[+5]_14 chr3:196105429-196105509 9.6e-05 11_[+5]_61 chr2:101508785-101508865 9.6e-05 47_[+5]_25 chr9:115308578-115308658 9.6e-05 68_[+5]_4 chr12:46613762-46613842 0.00016 58_[+5]_14 chr5:133298951-133299031 0.00016 72_[+5] chr15:91192006-91192086 0.00016 41_[+5]_31 chr12:57092924-57093004 0.00016 4_[+5]_68 chr1:100001134-100001214 0.00016 19_[+5]_53 chr8:27697275-27697355 0.00016 22_[+5]_50 chr20:2506421-2506501 0.00016 24_[+5]_48 chr5:64372456-64372536 0.00016 10_[+5]_62 chr1:110406935-110407015 0.00016 2_[+5]_70 chr11:76622263-76622343 0.00016 23_[+5]_49 chr6:147208386-147208466 0.00019 26_[+5]_46 chr4:38860605-38860685 0.00021 44_[+5]_28 chr10:29101087-29101167 0.00021 42_[+5]_30 chr3:129418261-129418341 0.00021 49_[+5]_23 chr14:70163715-70163795 0.00023 33_[+5]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AYTCATGA width=8 seqs=55 chr20:36188223-36188303 ( 50) ACTCATGA 1 chr7:143123798-143123878 ( 54) ACTCATGA 1 chr6:74274661-74274741 ( 65) ACTCATGA 1 chr11:100885828-10088590 ( 52) ACTCATGA 1 chr11:61407737-61407817 ( 47) ACTCATGA 1 chr19:50878166-50878246 ( 70) ACTCATGA 1 chr4:123828118-123828198 ( 58) ACTCATGA 1 chr8:144629515-144629595 ( 18) ACTCATGA 1 chr8:98775204-98775284 ( 68) ACTCATGA 1 chr7:150019631-150019711 ( 60) ACTCATGA 1 chr6:2980515-2980595 ( 73) ACTCATGA 1 chr9:138313374-138313454 ( 51) ACTCATGA 1 chr11:44552082-44552162 ( 16) ACTCATGA 1 chr7:130756985-130757065 ( 37) ACTCATGA 1 chr3:45106321-45106401 ( 45) ATTCATGA 1 chr1:8960117-8960197 ( 28) ATTCATGA 1 chr10:45906423-45906503 ( 41) ATTCATGA 1 chr6:20272843-20272923 ( 3) ATTCATGA 1 chr3:151961291-151961371 ( 1) ATTCATGA 1 chr5:125849878-125849958 ( 1) ATTCATGA 1 chr2:47525390-47525470 ( 65) ATTCATGA 1 chr7:157100647-157100727 ( 27) ATTCATGA 1 chr9:101614067-101614147 ( 5) ATTCATGA 1 chr4:184270329-184270409 ( 53) ATTCATGA 1 chr6:49907858-49907938 ( 2) ATTCATGA 1 chr1:12717674-12717754 ( 19) ATTCATGA 1 chr12:127392639-12739271 ( 29) ATTCATGA 1 chr1:236515146-236515226 ( 34) ATTCATGA 1 chr12:32174039-32174119 ( 11) ATTCATGA 1 chrX:109244157-109244237 ( 20) ATTCATGA 1 chr11:61872784-61872864 ( 43) ATTCATGA 1 chr6:15896067-15896147 ( 25) ATTCATGA 1 chr11:118583497-11858357 ( 8) ATTCATGA 1 chr9:130841395-130841475 ( 59) AATCATGA 1 chr2:64582034-64582114 ( 50) ACTCAGGA 1 chr7:138043956-138044036 ( 70) AATCATGA 1 chr2:39666903-39666983 ( 59) ACTCAGGA 1 chr3:196105429-196105509 ( 12) ACTTATGA 1 chr2:101508785-101508865 ( 48) AATCATGA 1 chr9:115308578-115308658 ( 69) ACTTATGA 1 chr12:46613762-46613842 ( 59) ACTCATAA 1 chr5:133298951-133299031 ( 73) ACTCATAA 1 chr15:91192006-91192086 ( 42) ACTCATAA 1 chr12:57092924-57093004 ( 5) ATTTATGA 1 chr1:100001134-100001214 ( 20) ATTCAGGA 1 chr8:27697275-27697355 ( 23) ATTTATGA 1 chr20:2506421-2506501 ( 25) ATTCAGGA 1 chr5:64372456-64372536 ( 11) ACTCATAA 1 chr1:110406935-110407015 ( 3) ATTTATGA 1 chr11:76622263-76622343 ( 24) ATTTATGA 1 chr6:147208386-147208466 ( 27) ATTCATAA 1 chr4:38860605-38860685 ( 45) ACTCATTA 1 chr10:29101087-29101167 ( 43) ACTCATTA 1 chr3:129418261-129418341 ( 50) ACTCATTA 1 chr14:70163715-70163795 ( 34) ATTCATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.95894 E= 3.9e-033 187 -1243 -1243 -1243 -232 103 -1243 84 -1243 -1243 -1243 186 -1243 200 -1243 -133 187 -1243 -1243 -1243 -1243 -1243 -166 176 -159 -1243 187 -192 187 -1243 -1243 -1243 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 55 E= 3.9e-033 1.000000 0.000000 0.000000 0.000000 0.054545 0.454545 0.000000 0.490909 0.000000 0.000000 0.000000 1.000000 0.000000 0.890909 0.000000 0.109091 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.072727 0.927273 0.090909 0.000000 0.836364 0.072727 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYTCATGA MEME-5 regular expression -------------------------------------------------------------------------------- A[TC]TCATGA -------------------------------------------------------------------------------- Time 18.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:115308578-115308658 4.27e-07 20_[+2(3.97e-05)]_31_[+1(8.83e-05)]_\ 1_[+5(9.62e-05)]_4 chr7:32945037-32945117 6.09e-05 69_[+2(1.08e-05)]_3 chr11:118583497-11858357 3.75e-09 7_[+5(3.89e-05)]_12_[+2(1.08e-05)]_\ 4_[+3(2.41e-05)]_9_[+4(5.29e-05)]_16 chr15:101137140-10113722 2.82e-06 33_[+3(5.39e-05)]_14_[+1(1.46e-05)]_\ 17 chr13:103259115-10325919 1.52e-02 80 chr12:83590594-83590674 2.21e-03 6_[+1(1.46e-05)]_13_[+1(4.71e-05)]_\ 37_[+1(4.71e-05)] chr7:130756985-130757065 1.08e-07 5_[+3(2.41e-05)]_4_[+4(3.26e-05)]_2_\ [+1(1.46e-05)]_1_[+5(1.74e-05)]_4_[+4(3.26e-05)]_24 chr11:19996531-19996611 6.91e-03 80 chr20:37081818-37081898 9.73e-03 80 chr6:15896067-15896147 5.36e-07 24_[+5(3.89e-05)]_3_[+3(5.39e-05)]_\ 1_[+2(7.18e-05)]_5_[+1(1.46e-05)]_15 chr11:76622263-76622343 2.44e-08 35_[+1(2.90e-05)]_[+2(4.84e-05)]_5_\ [+1(1.46e-05)]_8_[+4(5.29e-05)] chr10:106099976-10610005 8.61e-03 35_[+1(4.71e-05)]_7_[+3(9.71e-05)]_\ 22 chr11:61872784-61872864 1.24e-05 11_[+3(5.39e-05)]_14_[+1(1.46e-05)]_\ 1_[+5(3.89e-05)]_30 chr2:192502338-192502418 2.35e-02 80 chr7:12787553-12787633 6.91e-05 8_[+3(2.41e-05)]_13_[+3(9.71e-05)]_\ 9_[+4(1.64e-05)]_26 chr3:12824102-12824182 1.37e-04 12_[+3(5.39e-05)]_1_[+2(4.84e-05)]_\ 4_[+3(9.71e-05)]_39 chr4:129438357-129438437 1.37e-03 44_[+1(2.90e-05)]_28 chr1:159047057-159047137 4.68e-05 24_[+2(2.16e-05)]_4_[+3(5.39e-05)]_\ 13_[+3(2.41e-05)]_15 chr1:110406935-110407015 2.10e-08 22_[+2(1.08e-05)]_4_[+3(2.41e-05)]_\ 9_[+4(9.33e-05)]_21 chr11:44552082-44552162 9.32e-07 15_[+5(1.74e-05)]_25_[+1(2.90e-05)]_\ 24 chr3:185191396-185191476 1.30e-03 19_[+1(4.71e-05)]_53 chr4:123670897-123670977 1.66e-02 48_[+3(9.71e-05)]_24 chr18:12904135-12904215 6.79e-05 3_[+3(2.41e-05)]_14_[+1(1.46e-05)]_\ 47 chr2:217745550-217745630 5.13e-06 9_[+4(3.26e-05)]_31_[+1(2.90e-05)]_\ 24 chr5:64372456-64372536 7.06e-06 24_[+3(5.39e-05)]_48 chr11:95149232-95149312 2.62e-03 46_[+1(4.71e-05)]_26 chr3:129418261-129418341 3.05e-06 30_[+4(3.26e-05)]_23_[+4(3.26e-05)]_\ 11 chr1:19133960-19134040 5.62e-05 2_[+1(1.46e-05)]_2_[+4(5.29e-05)]_\ 24_[+1(2.90e-05)]_28 chrX:109244157-109244237 4.92e-09 8_[+2(1.08e-05)]_3_[+5(3.89e-05)]_3_\ [+3(5.39e-05)]_1_[+2(1.08e-05)]_21_[+4(1.64e-05)]_4 chr12:32174039-32174119 3.40e-08 10_[+5(3.89e-05)]_3_[+3(5.39e-05)]_\ 1_[+2(1.08e-05)]_4_[+3(9.71e-05)]_30 chr3:150169156-150169236 6.87e-04 21_[+4(5.29e-05)]_51 chr5:132307987-132308067 3.62e-04 46_[+2(3.97e-05)]_9_[+3(5.39e-05)]_\ 9 chr3:41741798-41741878 1.12e-01 80 chr9:138313374-138313454 1.08e-08 2_[+2(9.51e-05)]_21_[+4(3.26e-05)]_\ 2_[+1(1.46e-05)]_1_[+5(1.74e-05)]_22 chr17:53421961-53422041 7.78e-03 80 chr1:22118090-22118170 1.49e-05 1_[+3(9.71e-05)]_13_[+3(9.71e-05)]_\ 9_[+4(1.64e-05)]_33 chr6:2980515-2980595 8.55e-09 24_[+2(2.16e-05)]_9_[+3(5.39e-05)]_\ 13_[+3(2.41e-05)]_2_[+5(1.74e-05)] chr1:219321186-219321266 2.06e-02 80 chr1:236515146-236515226 2.88e-05 33_[+5(3.89e-05)]_4_[+1(1.46e-05)]_\ 12_[+3(5.39e-05)]_7 chr2:39369288-39369368 8.30e-04 54_[+3(9.71e-05)]_18 chr2:27760355-27760435 5.43e-03 34_[+1(2.90e-05)]_38 chr14:70163715-70163795 1.05e-06 45_[+1(2.90e-05)]_[+2(1.08e-05)]_4_\ [+1(1.46e-05)]_7 chr9:90776258-90776338 9.25e-03 37_[+3(5.39e-05)]_35 chr20:2506421-2506501 6.19e-07 13_[+2(1.08e-05)]_15_[+1(2.90e-05)]_\ [+2(1.08e-05)]_5_[+1(1.46e-05)]_15 chr12:127392639-12739271 1.73e-06 28_[+5(3.89e-05)]_4_[+1(2.90e-05)]_\ 13_[+1(1.46e-05)]_11 chr6:113278000-113278080 1.32e-03 38_[+1(4.71e-05)]_34 chr10:29101087-29101167 3.16e-06 11_[+3(5.39e-05)]_4_[+4(3.26e-05)]_\ 1_[+3(2.41e-05)]_40 chr2:158755909-158755989 5.43e-03 67_[+1(1.46e-05)]_5 chr9:96873345-96873425 4.40e-02 80 chr2:101508785-101508865 3.68e-05 33_[+1(4.71e-05)]_6_[+5(9.62e-05)]_\ 25 chr3:152798646-152798726 2.21e-02 9_[+1(8.83e-05)]_63 chr8:17388581-17388661 7.32e-05 3_[+2(7.18e-05)]_8_[+2(7.18e-05)]_2_\ [+1(1.46e-05)]_43 chr17:74597829-74597909 6.03e-07 9_[+2(7.18e-05)]_12_[+1(2.90e-05)]_\ 29_[+4(1.64e-05)]_6 chr7:150019631-150019711 2.22e-09 12_[+2(2.16e-05)]_9_[+3(2.41e-05)]_\ 4_[+4(3.26e-05)]_10_[+5(1.74e-05)]_13 chr3:45103684-45103764 4.80e-05 22_[+3(2.41e-05)]_50 chr3:23850189-23850269 4.87e-04 62_[+1(1.46e-05)]_10 chr5:12615381-12615461 9.45e-03 80 chr8:98775204-98775284 1.96e-09 19_[+2(3.97e-05)]_10_[+1(2.90e-05)]_\ 3_[+4(3.26e-05)]_2_[+1(1.46e-05)]_1_[+5(1.74e-05)]_5 chr1:12717674-12717754 2.79e-07 7_[+2(4.84e-05)]_3_[+5(3.89e-05)]_4_\ [+1(1.46e-05)]_42 chr2:241552408-241552488 5.40e-04 35_[+1(1.46e-05)]_37 chr10:3969075-3969155 1.04e-02 5_[+1(4.71e-05)]_67 chr6:49907858-49907938 3.76e-06 1_[+5(3.89e-05)]_3_[+1(1.46e-05)]_\ 14_[+1(1.46e-05)]_38 chr6:134516887-134516967 3.28e-03 25_[+1(2.90e-05)]_47 chr4:184270329-184270409 3.53e-08 4_[+2(3.97e-05)]_9_[+3(2.41e-05)]_\ 13_[+3(9.71e-05)]_2_[+5(3.89e-05)]_20 chr5:66502895-66502975 6.91e-02 80 chr22:21221936-21222016 4.06e-01 80 chr9:101614067-101614147 9.30e-05 4_[+5(3.89e-05)]_24_[+3(9.71e-05)]_\ 36 chr21:37693181-37693261 3.13e-03 22_[+1(4.71e-05)]_50 chr17:60711476-60711556 9.24e-06 4_[+3(5.39e-05)]_1_[+2(1.08e-05)]_4_\ [+3(2.41e-05)]_47 chr4:38860605-38860685 3.35e-02 80 chr21:22572609-22572689 2.38e-03 80 chr4:142921053-142921133 2.89e-02 80 chr7:157100647-157100727 5.78e-07 15_[+2(1.08e-05)]_3_[+5(3.89e-05)]_\ 25_[+1(1.46e-05)]_13 chr8:144629515-144629595 3.42e-10 17_[+5(1.74e-05)]_4_[+1(2.90e-05)]_\ [+2(1.08e-05)]_5_[+1(1.46e-05)]_7_[+4(1.64e-05)]_7 chr2:239331015-239331095 1.43e-01 80 chr2:13105700-13105780 4.58e-03 32_[+1(8.83e-05)]_40 chr12:65114769-65114849 1.19e-03 80 chr4:106884788-106884868 2.11e-03 27_[+1(1.46e-05)]_45 chr2:26980879-26980959 2.74e-07 9_[+1(2.90e-05)]_[+2(4.84e-05)]_5_\ [+1(1.46e-05)]_8_[+4(1.64e-05)]_26 chr8:91592724-91592804 1.04e-03 56_[+3(9.71e-05)]_16 chr3:196105429-196105509 6.45e-08 [+2(7.18e-05)]_3_[+5(9.62e-05)]_4_\ [+1(2.90e-05)]_12_[+3(9.71e-05)]_9_[+4(9.33e-05)]_12 chr11:46563308-46563388 1.30e-02 80 chr6:151550599-151550679 5.15e-05 6_[+1(1.46e-05)]_12_[+3(9.71e-05)]_\ 46 chr7:97847732-97847812 2.78e-01 80 chr2:47525390-47525470 2.77e-06 34_[+1(2.90e-05)]_13_[+1(4.71e-05)]_\ 1_[+5(3.89e-05)]_8 chr4:123828118-123828198 2.15e-07 26_[+3(2.41e-05)]_14_[+1(1.46e-05)]_\ 1_[+5(1.74e-05)]_15 chr11:56894348-56894428 8.85e-03 9_[+3(9.71e-05)]_34_[+3(9.71e-05)]_\ 21 chr8:27697275-27697355 4.92e-06 11_[+2(1.08e-05)]_15_[+1(4.71e-05)]_\ 13_[+1(4.71e-05)]_17 chr3:172109577-172109657 1.68e-04 80 chr1:100001134-100001214 1.68e-08 30_[+3(5.39e-05)]_1_[+2(1.08e-05)]_\ 4_[+3(9.71e-05)]_9_[+4(1.64e-05)]_4 chr6:118858977-118859057 8.17e-04 69_[+1(1.46e-05)]_3 chr1:109455845-109455925 2.82e-02 80 chr1:246334090-246334170 2.53e-01 80 chr8:42426818-42426898 1.83e-04 31_[+3(5.39e-05)]_19_[+1(4.71e-05)]_\ 14 chr11:109763402-10976348 1.98e-02 80 chr2:208637339-208637419 2.22e-05 29_[+2(3.97e-05)]_9_[+3(2.41e-05)]_\ 13_[+3(2.41e-05)]_5 chr14:36733972-36734052 2.14e-02 80 chr6:159920188-159920268 1.59e-01 80 chr2:119496762-119496842 1.76e-01 80 chr11:35364980-35365060 6.24e-02 80 chr11:57668859-57668939 1.62e-04 57_[+2(9.51e-05)]_15 chr9:132644309-132644389 7.49e-04 26_[+1(1.46e-05)]_46 chr9:132641527-132641607 6.34e-01 80 chr7:73574680-73574760 1.77e-05 39_[+2(2.16e-05)]_9_[+3(2.41e-05)]_\ 16 chr10:130397898-13039797 5.07e-03 33_[+3(9.71e-05)]_39 chr2:127402973-127403053 4.02e-02 20_[+4(5.29e-05)]_52 chr22:28243146-28243226 1.52e-02 38_[+1(8.83e-05)]_34 chr19:50878166-50878246 1.66e-07 21_[+2(3.97e-05)]_31_[+1(1.46e-05)]_\ 1_[+5(1.74e-05)]_3 chr4:99722534-99722614 5.63e-03 80 chr17:40781842-40781922 4.96e-02 80 chr13:42833806-42833886 6.71e-03 33_[+1(4.71e-05)]_39 chr2:178032838-178032918 1.46e-02 80 chr2:159177895-159177975 6.07e-03 36_[+3(5.39e-05)]_36 chr10:52086749-52086829 7.54e-04 48_[+3(5.39e-05)]_24 chr14:50437440-50437520 3.64e-03 66_[+1(4.71e-05)]_6 chr12:57092924-57093004 1.16e-06 15_[+3(5.39e-05)]_29_[+4(1.64e-05)]_\ 20 chr1:30664108-30664188 5.86e-04 47_[+1(2.90e-05)]_25 chr14:91668792-91668872 8.69e-03 60_[+3(9.71e-05)]_12 chr12:4262879-4262959 2.01e-03 19_[+1(2.90e-05)]_53 chr7:70033909-70033989 2.19e-02 31_[+1(4.71e-05)]_41 chrX:48539020-48539100 2.73e-03 63_[+3(2.41e-05)]_9 chr12:7261826-7261906 5.67e-05 18_[+2(3.97e-05)]_7_[+1(1.46e-05)]_\ 39 chr21:20806056-20806136 1.27e-02 80 chr19:45091217-45091297 2.54e-05 11_[+1(1.46e-05)]_8_[+4(1.64e-05)]_\ 45 chr20:60101056-60101136 2.11e-03 80 chr12:12910707-12910787 3.84e-02 72_[+1(4.71e-05)] chr2:39666903-39666983 2.23e-04 58_[+5(9.62e-05)]_14 chr13:92192384-92192464 7.09e-04 15_[+1(2.90e-05)]_8_[+1(1.46e-05)]_\ 41 chr1:38989342-38989422 5.94e-04 23_[+1(2.90e-05)]_49 chr5:125849878-125849958 1.80e-09 [+5(3.89e-05)]_12_[+2(1.08e-05)]_5_\ [+1(1.46e-05)]_8_[+4(1.64e-05)]_23 chr8:125966912-125966992 3.32e-03 80 chr2:807522-807602 3.51e-03 49_[+1(8.83e-05)]_23 chr9:127894143-127894223 1.53e-01 80 chr8:126954521-126954601 2.56e-01 80 chr11:45856113-45856193 2.91e-03 42_[+1(8.83e-05)]_30 chr6:134279208-134279288 2.33e-03 48_[+1(4.71e-05)]_24 chr3:196569666-196569746 3.18e-06 27_[+2(1.08e-05)]_15_[+1(2.90e-05)]_\ 12_[+3(2.41e-05)]_2 chr11:22774620-22774700 6.35e-02 80 chr6:147208386-147208466 4.94e-07 38_[+1(2.90e-05)]_[+2(1.08e-05)]_26 chr1:118202652-118202732 2.46e-04 80 chr6:106968861-106968941 1.34e-02 80 chr8:144021576-144021656 5.39e-01 80 chr10:48402562-48402642 2.50e-03 30_[+1(2.90e-05)]_42 chr11:61407737-61407817 3.26e-07 16_[+1(2.90e-05)]_3_[+4(3.26e-05)]_\ 1_[+3(5.39e-05)]_2_[+5(1.74e-05)]_26 chr4:25052510-25052590 6.85e-01 80 chr1:160635702-160635782 1.28e-04 21_[+2(7.18e-05)]_8_[+1(2.90e-05)]_\ 35 chr6:135405788-135405868 3.78e-03 43_[+1(4.71e-05)]_29 chr7:129772266-129772346 1.33e-02 80 chr4:147328985-147329065 2.62e-01 80 chr20:40325243-40325323 2.57e-03 34_[+1(2.90e-05)]_38 chr12:13441544-13441624 3.06e-03 80 chr3:151961291-151961371 3.62e-05 [+5(3.89e-05)]_44_[+1(2.90e-05)]_20 chr11:96688715-96688795 1.73e-03 46_[+1(4.71e-05)]_26 chr8:48572438-48572518 5.85e-03 11_[+3(2.41e-05)]_61 chr1:95100717-95100797 2.95e-01 80 chr6:35311424-35311504 1.32e-03 56_[+1(2.90e-05)]_16 chr7:24964099-24964179 2.08e-02 80 chr12:66696193-66696273 4.65e-06 2_[+4(1.64e-05)]_8_[+1(1.46e-05)]_\ 54 chr3:151391991-151392071 2.50e-01 80 chr17:25902285-25902365 4.16e-07 22_[+3(5.39e-05)]_14_[+1(1.46e-05)]_\ 8_[+4(1.64e-05)]_12 chr7:138043956-138044036 6.82e-08 38_[+3(5.39e-05)]_4_[+4(7.30e-05)]_\ 2_[+1(1.46e-05)]_1_[+5(9.62e-05)]_3 chr2:27243260-27243340 3.73e-03 16_[+3(5.39e-05)]_56 chr1:40849400-40849480 5.58e-06 18_[+4(7.30e-05)]_5_[+3(5.39e-05)]_\ 41 chrX:123898339-123898419 1.36e-02 80 chr5:173280572-173280652 7.76e-03 80 chr17:73444701-73444781 4.34e-01 80 chr12:109217708-10921778 6.84e-04 68_[+2(9.51e-05)]_4 chr1:249183730-249183810 6.01e-02 80 chrX:48797951-48798031 2.32e-03 30_[+3(6.84e-05)]_42 chr7:119566116-119566196 5.81e-01 80 chr2:196233730-196233810 3.26e-05 48_[+1(1.46e-05)]_24 chr6:20272843-20272923 1.03e-09 2_[+5(3.89e-05)]_3_[+3(5.39e-05)]_1_\ [+2(2.16e-05)]_5_[+1(1.46e-05)]_8_[+4(1.64e-05)]_21 chr2:217957636-217957716 5.58e-01 80 chr5:119848602-119848682 1.52e-02 80 chr11:100885828-10088590 1.62e-08 3_[+2(2.16e-05)]_9_[+3(5.39e-05)]_4_\ [+4(7.30e-05)]_1_[+3(9.71e-05)]_2_[+5(1.74e-05)]_21 chr8:41316000-41316080 1.38e-07 32_[+2(2.16e-05)]_10_[+1(2.90e-05)]_\ 3_[+4(1.64e-05)]_11 chr12:93964643-93964723 4.78e-03 29_[+1(1.46e-05)]_3_[+1(1.46e-05)]_\ 32 chr17:53894319-53894399 2.66e-01 80 chr6:74274661-74274741 2.97e-09 16_[+2(2.16e-05)]_21_[+4(3.26e-05)]_\ 2_[+1(1.46e-05)]_1_[+5(1.74e-05)]_8 chr1:172411661-172411741 2.75e-01 80 chr1:181875273-181875353 1.49e-03 23_[+4(9.33e-05)]_49 chr1:191858328-191858408 3.18e-03 80 chr10:45906423-45906503 2.24e-06 40_[+5(3.89e-05)]_3_[+3(6.84e-05)]_\ 1_[+2(1.08e-05)]_4_[+3(6.84e-05)] chr14:103893963-10389404 7.43e-06 2_[+3(5.39e-05)]_14_[+1(1.46e-05)]_\ 8_[+4(1.64e-05)]_32 chr5:112214597-112214677 3.61e-01 80 chr5:134528297-134528377 4.17e-01 80 chr2:7050048-7050128 1.66e-02 80 chr16:20956609-20956689 1.93e-06 40_[+2(2.16e-05)]_10_[+1(4.71e-05)]_\ 3_[+4(3.26e-05)]_3 chr12:94136039-94136119 5.48e-04 42_[+3(5.39e-05)]_30 chr8:56852636-56852716 3.13e-05 14_[+3(9.71e-05)]_27_[+4(1.64e-05)]_\ 23 chr2:64582034-64582114 2.85e-02 49_[+5(9.62e-05)]_23 chr9:373868-373948 2.25e-02 80 chr4:74962036-74962116 1.38e-05 7_[+2(1.08e-05)]_6_[+1(8.83e-05)]_\ 51 chr8:41630348-41630428 2.14e-04 43_[+4(7.30e-05)]_29 chr8:37749424-37749504 3.76e-01 80 chr15:91192006-91192086 1.87e-06 11_[+1(2.90e-05)]_3_[+4(3.26e-05)]_\ 2_[+1(1.46e-05)]_40 chr3:187463230-187463310 2.88e-03 45_[+3(5.39e-05)]_27 chr16:84766432-84766512 1.74e-02 80 chr9:130841395-130841475 4.80e-05 37_[+1(2.90e-05)]_13_[+5(9.62e-05)]_\ 14 chr6:15018792-15018872 1.04e-02 80 chr9:19748751-19748831 3.78e-03 29_[+1(8.83e-05)]_43 chr10:108792260-10879234 2.60e-03 80 chr8:67967447-67967527 9.82e-02 80 chr11:13112075-13112155 2.74e-04 20_[+1(1.46e-05)]_2_[+4(9.33e-05)]_\ 42 chr22:22302150-22302230 2.65e-02 80 chr1:247531518-247531598 2.91e-05 62_[+1(1.46e-05)]_10 chr3:88245164-88245244 1.78e-07 11_[+1(2.90e-05)]_[+2(1.08e-05)]_4_\ [+3(9.71e-05)]_9_[+4(1.64e-05)]_24 chr1:35965522-35965602 2.58e-02 80 chr12:76508284-76508364 2.04e-04 39_[+1(1.46e-05)]_2_[+2(9.51e-05)]_\ 23 chr1:22014379-22014459 2.66e-04 8_[+1(2.90e-05)]_64 chr10:11183663-11183743 9.24e-03 80 chr3:50649420-50649500 8.69e-04 18_[+1(2.90e-05)]_54 chrX:107801636-107801716 2.02e-01 80 chr13:99977201-99977281 6.64e-03 80 chr7:5123113-5123193 9.67e-01 80 chr6:143485788-143485868 4.87e-02 80 chr10:11752852-11752932 2.74e-02 20_[+3(9.71e-05)]_52 chr1:180554754-180554834 1.51e-03 6_[+1(2.90e-05)]_66 chr7:143123798-143123878 1.18e-06 11_[+2(2.16e-05)]_34_[+5(1.74e-05)]_\ 19 chr5:133298951-133299031 1.85e-03 80 chr4:37002011-37002091 4.89e-01 80 chr12:123872834-12387291 6.56e-01 80 chr13:95926595-95926675 6.99e-01 80 chr12:46613762-46613842 4.35e-03 80 chr6:20458748-20458828 7.65e-02 80 chr9:77666395-77666475 4.33e-03 33_[+1(8.83e-05)]_39 chr3:24393419-24393499 2.76e-02 80 chr6:3407267-3407347 4.46e-03 80 chr20:36188223-36188303 1.96e-09 1_[+2(3.97e-05)]_10_[+1(2.90e-05)]_\ 3_[+4(3.26e-05)]_2_[+1(1.46e-05)]_1_[+5(1.74e-05)]_23 chr6:25535666-25535746 1.48e-03 63_[+1(4.71e-05)]_9 chrX:2792474-2792554 3.89e-04 47_[+1(8.83e-05)]_17_[+1(8.83e-05)] chr6:160420335-160420415 9.49e-04 12_[+1(1.46e-05)]_60 chr15:55532084-55532164 2.68e-01 80 chr10:17071673-17071753 7.32e-04 17_[+1(2.90e-05)]_55 chr2:7020732-7020812 6.17e-01 80 chr18:3526563-3526643 2.74e-01 80 chr3:8899745-8899825 9.96e-01 80 chr5:148061933-148062013 1.82e-03 29_[+1(2.90e-05)]_43 chr6:125404390-125404470 7.00e-03 80 chr3:156837296-156837376 1.10e-02 34_[+1(1.46e-05)]_38 chr1:8960117-8960197 1.76e-07 27_[+5(3.89e-05)]_3_[+1(2.90e-05)]_\ [+2(1.08e-05)]_26 chr20:23113738-23113818 3.15e-04 17_[+1(1.46e-05)]_55 chr1:100234162-100234242 1.67e-03 40_[+1(2.90e-05)]_32 chr3:45106321-45106401 2.74e-07 33_[+2(1.08e-05)]_3_[+5(3.89e-05)]_\ 4_[+1(2.90e-05)]_16 chr10:63540240-63540320 4.17e-01 80 chr15:48988536-48988616 8.21e-03 80 chr11:114165931-11416601 2.88e-03 36_[+1(1.46e-05)]_36 chr1:234740765-234740845 6.51e-01 80 chr1:63156044-63156124 2.14e-01 80 chr11:75401493-75401573 1.01e-05 12_[+1(2.90e-05)]_13_[+4(3.26e-05)]_\ 39 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************