******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SRSF3.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2:133017115-133017195 1.0000 80 chr11:65628605-65628685 1.0000 80 chr17:36571302-36571382 1.0000 80 chr22:22120509-22120589 1.0000 80 chr19:2041734-2041814 1.0000 80 chr6:37138690-37138770 1.0000 80 chr19:5623481-5623561 1.0000 80 chr17:41278156-41278236 1.0000 80 chr11:34074645-34074725 1.0000 80 chr11:77761325-77761405 1.0000 80 chr5:131795599-131795679 1.0000 80 chr5:137878380-137878460 1.0000 80 chr22:41697920-41698000 1.0000 80 chr5:176923559-176923639 1.0000 80 chr17:46620682-46620762 1.0000 80 chr1:47696521-47696601 1.0000 80 chr1:228270813-228270893 1.0000 80 chr12:122242681-12224276 1.0000 80 chr22:23535117-23535197 1.0000 80 chr10:111970179-11197025 1.0000 80 chr22:18978559-18978639 1.0000 80 chr2:172967040-172967120 1.0000 80 chr17:46703285-46703365 1.0000 80 chr20:48809450-48809530 1.0000 80 chr2:145273470-145273550 1.0000 80 chr11:57261515-57261595 1.0000 80 chr15:75339942-75340022 1.0000 80 chr19:10613066-10613146 1.0000 80 chr21:47743330-47743410 1.0000 80 chr15:41245140-41245220 1.0000 80 chr17:79480392-79480472 1.0000 80 chr1:9777066-9777146 1.0000 80 chr1:145396046-145396126 1.0000 80 chr4:775107-775187 1.0000 80 chr9:80911368-80911448 1.0000 80 chr7:150650936-150651016 1.0000 80 chr6:125284316-125284396 1.0000 80 chr4:24585724-24585804 1.0000 80 chr22:20791553-20791633 1.0000 80 chr7:100033265-100033345 1.0000 80 chr5:176831810-176831890 1.0000 80 chr6:43740088-43740168 1.0000 80 chr16:87985563-87985643 1.0000 80 chr19:1408208-1408288 1.0000 80 chr9:139981788-139981868 1.0000 80 chr19:571375-571455 1.0000 80 chr12:57081430-57081510 1.0000 80 chr1:29063907-29063987 1.0000 80 chr22:21140522-21140602 1.0000 80 chr17:46619764-46619844 1.0000 80 chr1:33282564-33282644 1.0000 80 chr21:44395729-44395809 1.0000 80 chr6:34760249-34760329 1.0000 80 chr22:23003278-23003358 1.0000 80 chr7:64459542-64459622 1.0000 80 chr8:38240269-38240349 1.0000 80 chr22:19864176-19864256 1.0000 80 chr22:22126794-22126874 1.0000 80 chr20:30102659-30102739 1.0000 80 chr20:362012-362092 1.0000 80 chr11:34937487-34937567 1.0000 80 chr19:41770707-41770787 1.0000 80 chr17:48944198-48944278 1.0000 80 chr22:23356270-23356350 1.0000 80 chr12:102091888-10209196 1.0000 80 chr9:86594831-86594911 1.0000 80 chr10:12084530-12084610 1.0000 80 chr16:81492051-81492131 1.0000 80 chr1:28562974-28563054 1.0000 80 chr6:135503621-135503701 1.0000 80 chr21:45138465-45138545 1.0000 80 chr1:1509633-1509713 1.0000 80 chr16:89041996-89042076 1.0000 80 chr7:30634906-30634986 1.0000 80 chr22:20129300-20129380 1.0000 80 chr8:37888791-37888871 1.0000 80 chr3:176914583-176914663 1.0000 80 chr9:100745917-100745997 1.0000 80 chr11:64889125-64889205 1.0000 80 chr12:90101831-90101911 1.0000 80 chr19:18271782-18271862 1.0000 80 chr1:65533639-65533719 1.0000 80 chr17:47075006-47075086 1.0000 80 chr20:30193832-30193912 1.0000 80 chr1:236558950-236559030 1.0000 80 chr1:204681399-204681479 1.0000 80 chr2:127414189-127414269 1.0000 80 chr9:101984767-101984847 1.0000 80 chr5:133561443-133561523 1.0000 80 chr22:21343234-21343314 1.0000 80 chr4:80993738-80993818 1.0000 80 chr2:241505652-241505732 1.0000 80 chr5:133984723-133984803 1.0000 80 chr8:91997108-91997188 1.0000 80 chr2:70528775-70528855 1.0000 80 chr12:123848949-12384902 1.0000 80 chr22:19929679-19929759 1.0000 80 chr18:33767913-33767993 1.0000 80 chr3:128135637-128135717 1.0000 80 chr7:644657-644737 1.0000 80 chr6:160390547-160390627 1.0000 80 chr3:156877481-156877561 1.0000 80 chr11:47416012-47416092 1.0000 80 chr1:27114116-27114196 1.0000 80 chr9:132647784-132647864 1.0000 80 chr3:128369263-128369343 1.0000 80 chr5:172754321-172754401 1.0000 80 chr17:79894767-79894847 1.0000 80 chr16:87812470-87812550 1.0000 80 chr11:118927545-11892762 1.0000 80 chr11:61583159-61583239 1.0000 80 chr16:67970284-67970364 1.0000 80 chr1:201140247-201140327 1.0000 80 chr2:10418310-10418390 1.0000 80 chr1:1510660-1510740 1.0000 80 chr1:20987491-20987571 1.0000 80 chr3:171757635-171757715 1.0000 80 chr12:53267709-53267789 1.0000 80 chr20:34541831-34541911 1.0000 80 chr16:30596666-30596746 1.0000 80 chr10:112632293-11263237 1.0000 80 chr10:74033068-74033148 1.0000 80 chr9:95857495-95857575 1.0000 80 chr6:34205631-34205711 1.0000 80 chr2:38870479-38870559 1.0000 80 chr7:643806-643886 1.0000 80 chr21:44527197-44527277 1.0000 80 chr7:99156629-99156709 1.0000 80 chr3:151987106-151987186 1.0000 80 chr7:152372842-152372922 1.0000 80 chr1:32671517-32671597 1.0000 80 chr11:3861809-3861889 1.0000 80 chr17:56084256-56084336 1.0000 80 chr2:27009244-27009324 1.0000 80 chrX:153991523-153991603 1.0000 80 chr2:70314939-70315019 1.0000 80 chr7:155436683-155436763 1.0000 80 chr14:23322524-23322604 1.0000 80 chr22:19130036-19130116 1.0000 80 chr11:61717791-61717871 1.0000 80 chr22:19930495-19930575 1.0000 80 chr19:50427422-50427502 1.0000 80 chr12:116990518-11699059 1.0000 80 chr15:93426585-93426665 1.0000 80 chr16:87840847-87840927 1.0000 80 chr22:37958154-37958234 1.0000 80 chr6:27861549-27861629 1.0000 80 chr6:32938234-32938314 1.0000 80 chr8:56685465-56685545 1.0000 80 chr9:128004290-128004370 1.0000 80 chr3:128208827-128208907 1.0000 80 chr3:150127093-150127173 1.0000 80 chr6:33589483-33589563 1.0000 80 chr17:25680477-25680557 1.0000 80 chr4:83294770-83294850 1.0000 80 chr22:19172159-19172239 1.0000 80 chr19:12902844-12902924 1.0000 80 chr1:245027084-245027164 1.0000 80 chr1:11865476-11865556 1.0000 80 chr7:97501313-97501393 1.0000 80 chr7:44924657-44924737 1.0000 80 chr19:49258340-49258420 1.0000 80 chr13:111522203-11152228 1.0000 80 chr22:20048642-20048722 1.0000 80 chr7:148396652-148396732 1.0000 80 chr11:9335822-9335902 1.0000 80 chr8:29940226-29940306 1.0000 80 chr1:228271012-228271092 1.0000 80 chr10:43891853-43891933 1.0000 80 chr15:89164834-89164914 1.0000 80 chr7:100291241-100291321 1.0000 80 chr2:232572407-232572487 1.0000 80 chr17:79829729-79829809 1.0000 80 chr1:1310188-1310268 1.0000 80 chr1:27023732-27023812 1.0000 80 chr18:3451796-3451876 1.0000 80 chr2:85765564-85765644 1.0000 80 chr6:86352290-86352370 1.0000 80 chr1:145039932-145040012 1.0000 80 chr9:139267512-139267592 1.0000 80 chr1:8877227-8877307 1.0000 80 chr9:100745018-100745098 1.0000 80 chr2:133016901-133016981 1.0000 80 chrX:154444906-154444986 1.0000 80 chr3:156393462-156393542 1.0000 80 chr2:114648083-114648163 1.0000 80 chr1:35658301-35658381 1.0000 80 chr17:42091968-42092048 1.0000 80 chr10:70481372-70481452 1.0000 80 chr15:91537480-91537560 1.0000 80 chr20:45985855-45985935 1.0000 80 chr22:22480549-22480629 1.0000 80 chrX:153607913-153607993 1.0000 80 chr22:21159025-21159105 1.0000 80 chr11:34127428-34127508 1.0000 80 chr1:23346361-23346441 1.0000 80 chr20:32699621-32699701 1.0000 80 chr6:43878942-43879022 1.0000 80 chr1:38158461-38158541 1.0000 80 chr11:8704629-8704709 1.0000 80 chr6:43739143-43739223 1.0000 80 chr1:109235328-109235408 1.0000 80 chr19:44259485-44259565 1.0000 80 chr15:65823078-65823158 1.0000 80 chr16:29816453-29816533 1.0000 80 chr20:48808334-48808414 1.0000 80 chr1:178995583-178995663 1.0000 80 chr4:668555-668635 1.0000 80 chr22:19587306-19587386 1.0000 80 chr1:113161778-113161858 1.0000 80 chr6:134273345-134273425 1.0000 80 chr7:72935832-72935912 1.0000 80 chr6:32937272-32937352 1.0000 80 chr7:116140143-116140223 1.0000 80 chr1:111506156-111506236 1.0000 80 chr10:32635830-32635910 1.0000 80 chr11:122933595-12293367 1.0000 80 chr17:78830954-78831034 1.0000 80 chr5:10250735-10250815 1.0000 80 chr12:64798460-64798540 1.0000 80 chr21:45304428-45304508 1.0000 80 chr1:36349140-36349220 1.0000 80 chr3:40351452-40351532 1.0000 80 chr18:57026161-57026241 1.0000 80 chr7:143077728-143077808 1.0000 80 chr19:33183610-33183690 1.0000 80 chr19:55728324-55728404 1.0000 80 chr9:139622959-139623039 1.0000 80 chr21:44495712-44495792 1.0000 80 chr22:20073386-20073466 1.0000 80 chr12:93772357-93772437 1.0000 80 chr19:41770508-41770588 1.0000 80 chr16:3030861-3030941 1.0000 80 chr17:73178324-73178404 1.0000 80 chr22:41940210-41940290 1.0000 80 chr14:88237701-88237781 1.0000 80 chr1:235291819-235291899 1.0000 80 chr1:51702314-51702394 1.0000 80 chrX:153236942-153237022 1.0000 80 chr9:132245589-132245669 1.0000 80 chr1:32573998-32574078 1.0000 80 chr8:22926220-22926300 1.0000 80 chr11:207977-208057 1.0000 80 chr6:158243806-158243886 1.0000 80 chr19:33864740-33864820 1.0000 80 chr22:32023217-32023297 1.0000 80 chr22:22138687-22138767 1.0000 80 chr16:30621362-30621442 1.0000 80 chr19:11200492-11200572 1.0000 80 chr19:16652894-16652974 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SRSF3/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SRSF3.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.169 C 0.331 G 0.333 T 0.168 Background letter frequencies (from file dataset with add-one prior applied): A 0.169 C 0.331 G 0.332 T 0.168 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF YATTTCCT MEME-1 width = 8 sites = 8 llr = 84 E-value = 8.4e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :8:::::: pos.-specific C 41:::8a: probability G :1:::3:: matrix T 6:aaa::a bits 2.6 *** * 2.3 *** * 2.1 *** * 1.8 *** * Relative 1.5 *** ** Entropy 1.3 ***** ** (15.2 bits) 1.0 ***** ** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TATTTCCT consensus C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:56084256-56084336 13 2.48e-06 TACTCGGACC TATTTCCT CAAGGCTGCA chr7:643806-643886 68 2.48e-06 CTGTCTTCTC TATTTCCT GGGCT chr11:34937487-34937567 31 4.96e-06 CTCTCTCAGT TATTTGCT TCTTTCCAAC chr3:128369263-128369343 18 9.85e-06 CGGGTCTCCG CATTTCCT GAGGCCTAGA chr20:30102659-30102739 38 9.85e-06 CCGGGGCTGG CATTTCCT ACCCCGGGAT chr22:41697920-41698000 58 1.47e-05 TCTAAAACCC CATTTGCT CCTTTTTGGG chr1:29063907-29063987 8 2.45e-05 CCTTCCT TGTTTCCT TCCCCTTCCT chr22:20791553-20791633 40 2.45e-05 tttttccagg tctttcct gatatcccgg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:56084256-56084336 2.5e-06 12_[+1]_60 chr7:643806-643886 2.5e-06 67_[+1]_5 chr11:34937487-34937567 5e-06 30_[+1]_42 chr3:128369263-128369343 9.8e-06 17_[+1]_55 chr20:30102659-30102739 9.8e-06 37_[+1]_35 chr22:41697920-41698000 1.5e-05 57_[+1]_15 chr1:29063907-29063987 2.4e-05 7_[+1]_65 chr22:20791553-20791633 2.4e-05 39_[+1]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YATTTCCT width=8 seqs=8 chr17:56084256-56084336 ( 13) TATTTCCT 1 chr7:643806-643886 ( 68) TATTTCCT 1 chr11:34937487-34937567 ( 31) TATTTGCT 1 chr3:128369263-128369343 ( 18) CATTTCCT 1 chr20:30102659-30102739 ( 38) CATTTCCT 1 chr22:41697920-41698000 ( 58) CATTTGCT 1 chr1:29063907-29063987 ( 8) TGTTTCCT 1 chr22:20791553-20791633 ( 40) TCTTTCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.4773 E= 8.4e+003 -965 18 -965 190 215 -140 -141 -965 -965 -965 -965 258 -965 -965 -965 258 -965 -965 -965 258 -965 118 -41 -965 -965 160 -965 -965 -965 -965 -965 258 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 8.4e+003 0.000000 0.375000 0.000000 0.625000 0.750000 0.125000 0.125000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.750000 0.250000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YATTTCCT MEME-1 regular expression -------------------------------------------------------------------------------- [TC]ATTT[CG]CT -------------------------------------------------------------------------------- Time 5.19 secs. ******************************************************************************** ******************************************************************************** MOTIF TCYKGGRA MEME-2 width = 8 sites = 35 llr = 278 E-value = 5.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 3:2:::6a pos.-specific C :95::::: probability G :::5aa4: matrix T 7135:::: bits 2.6 * 2.3 * 2.1 * 1.8 * Relative 1.5 * ** * Entropy 1.3 * **** (11.5 bits) 1.0 ** ***** 0.8 ** ***** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TCCGGGAA consensus A TT G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:87840847-87840927 16 1.47e-05 GAGGCGCGGT TCCTGGAA GCAGGGAGGG chr2:241505652-241505732 6 1.47e-05 CTTCT TCCTGGAA GCTTTGCTGC chr6:43878942-43879022 24 2.44e-05 CCTCTGAGCA TCTGGGAA TCTCAGCCCG chr7:100291241-100291321 19 4.86e-05 TGGGGAGAAC TCCGGGAA GCGCGGGGCC chr8:29940226-29940306 39 4.86e-05 GCACCCAGGC TCCGGGAA GACGGCGCAC chr12:53267709-53267789 52 4.86e-05 GCAGAGACAT TCCGGGAA GAGCTCAGAG chr21:44395729-44395809 56 4.86e-05 GGCCCGAGGG TCCGGGAA TGGCGGCGTC chr16:67970284-67970364 15 5.36e-05 CCCGCTGCTC ACTTGGAA CACCAGGCCC chr2:38870479-38870559 44 6.34e-05 gcccgcgccc acctggaa ctcgcgctgg chr22:41697920-41698000 12 6.34e-05 gcgccgggcc ACCTGGAA AGTGGGATTT chr17:25680477-25680557 51 7.57e-05 TCGGCTAAGG TTTTGGAA ACATCCTTGG chr3:128208827-128208907 49 7.57e-05 GCCGCGGCTC TCAGGGAA GTGGCTACGC chr1:32671517-32671597 23 7.57e-05 TCGCGCCGGA TCAGGGAA ACGGGAAGAG chr8:38240269-38240349 26 7.57e-05 CCTACGGCTG TCAGGGAA GGGCTCCGGT chr21:44495712-44495792 32 9.04e-05 GGGGCGGGGG TCTTGGGA GACCCTGTCT chr22:21343234-21343314 65 9.04e-05 TCTGGGGGTT TCTTGGGA GGGGGATG chr1:32573998-32574078 6 1.19e-04 CGTGT TCCTGGGA GGTAGAAAGG chr1:113161778-113161858 22 1.19e-04 GAGTCGGGAA TCCTGGGA TAGTGGCGGA chr2:114648083-114648163 1 1.19e-04 . TCCTGGGA CTGGGGCGGG chr7:644657-644737 69 1.19e-04 GCTGATGCCC ACTGggaa gtga chr11:65628605-65628685 30 1.19e-04 CTCCGTACTC TCCTGGGA GCCCTTGGCT chr6:86352290-86352370 39 1.44e-04 CCGCAGCAGC ACATGGAA AGGAGGAAGT chr1:27114116-27114196 38 1.44e-04 CTCGGCCCAC ACCGGGAA CTCAGTGAAC chr3:176914583-176914663 59 1.44e-04 ATCCCCCGAG ACCGGGAA AGGGTAGGGG chr9:95857495-95857575 34 1.49e-04 CTCCCCTGGA TTTGGGAA AGCATCACTG chr10:32635830-32635910 40 1.80e-04 ACCTCTCCGC TCTGGGGA AACGGCCCCG chr1:33282564-33282644 37 1.80e-04 CACTGTGATT TCTGGGGA ACCCAGGGAA chr1:8877227-8877307 41 2.28e-04 GCGGCCCAGC TCCGGGGA AAGTGGCGGG chr8:37888791-37888871 72 2.28e-04 CGTTCTTCTG TCCGGGGA G chr7:64459542-64459622 36 2.28e-04 gggcgccggg tcatggga gagccaatct chr18:3451796-3451876 27 2.40e-04 AGGACTCGGG ACAGGGAA TTGGCCCTGG chr5:133561443-133561523 27 2.74e-04 GAGGCTCTTG ACCTGGGA CTCGGACAGC chr7:99156629-99156709 34 3.03e-04 TCACTGGTCC TTTTGGGA CTTTGCCTTG chr2:70314939-70315019 21 3.18e-04 AGGAAGCATC ATTGGGAA GAAAGGGGAG chr9:132647784-132647864 63 3.50e-04 TGCCTCCCCT ATCGGGAA AGCGTTTTAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:87840847-87840927 1.5e-05 15_[+2]_57 chr2:241505652-241505732 1.5e-05 5_[+2]_67 chr6:43878942-43879022 2.4e-05 23_[+2]_49 chr7:100291241-100291321 4.9e-05 18_[+2]_54 chr8:29940226-29940306 4.9e-05 38_[+2]_34 chr12:53267709-53267789 4.9e-05 51_[+2]_21 chr21:44395729-44395809 4.9e-05 55_[+2]_17 chr16:67970284-67970364 5.4e-05 14_[+2]_58 chr2:38870479-38870559 6.3e-05 43_[+2]_29 chr22:41697920-41698000 6.3e-05 11_[+2]_61 chr17:25680477-25680557 7.6e-05 50_[+2]_22 chr3:128208827-128208907 7.6e-05 48_[+2]_24 chr1:32671517-32671597 7.6e-05 22_[+2]_50 chr8:38240269-38240349 7.6e-05 25_[+2]_47 chr21:44495712-44495792 9e-05 31_[+2]_41 chr22:21343234-21343314 9e-05 64_[+2]_8 chr1:32573998-32574078 0.00012 5_[+2]_67 chr1:113161778-113161858 0.00012 21_[+2]_51 chr2:114648083-114648163 0.00012 [+2]_72 chr7:644657-644737 0.00012 68_[+2]_4 chr11:65628605-65628685 0.00012 29_[+2]_43 chr6:86352290-86352370 0.00014 38_[+2]_34 chr1:27114116-27114196 0.00014 37_[+2]_35 chr3:176914583-176914663 0.00014 58_[+2]_14 chr9:95857495-95857575 0.00015 33_[+2]_39 chr10:32635830-32635910 0.00018 39_[+2]_33 chr1:33282564-33282644 0.00018 36_[+2]_36 chr1:8877227-8877307 0.00023 40_[+2]_32 chr8:37888791-37888871 0.00023 71_[+2]_1 chr7:64459542-64459622 0.00023 35_[+2]_37 chr18:3451796-3451876 0.00024 26_[+2]_46 chr5:133561443-133561523 0.00027 26_[+2]_46 chr7:99156629-99156709 0.0003 33_[+2]_39 chr2:70314939-70315019 0.00032 20_[+2]_52 chr9:132647784-132647864 0.00035 62_[+2]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCYKGGRA width=8 seqs=35 chr16:87840847-87840927 ( 16) TCCTGGAA 1 chr2:241505652-241505732 ( 6) TCCTGGAA 1 chr6:43878942-43879022 ( 24) TCTGGGAA 1 chr7:100291241-100291321 ( 19) TCCGGGAA 1 chr8:29940226-29940306 ( 39) TCCGGGAA 1 chr12:53267709-53267789 ( 52) TCCGGGAA 1 chr21:44395729-44395809 ( 56) TCCGGGAA 1 chr16:67970284-67970364 ( 15) ACTTGGAA 1 chr2:38870479-38870559 ( 44) ACCTGGAA 1 chr22:41697920-41698000 ( 12) ACCTGGAA 1 chr17:25680477-25680557 ( 51) TTTTGGAA 1 chr3:128208827-128208907 ( 49) TCAGGGAA 1 chr1:32671517-32671597 ( 23) TCAGGGAA 1 chr8:38240269-38240349 ( 26) TCAGGGAA 1 chr21:44495712-44495792 ( 32) TCTTGGGA 1 chr22:21343234-21343314 ( 65) TCTTGGGA 1 chr1:32573998-32574078 ( 6) TCCTGGGA 1 chr1:113161778-113161858 ( 22) TCCTGGGA 1 chr2:114648083-114648163 ( 1) TCCTGGGA 1 chr7:644657-644737 ( 69) ACTGGGAA 1 chr11:65628605-65628685 ( 30) TCCTGGGA 1 chr6:86352290-86352370 ( 39) ACATGGAA 1 chr1:27114116-27114196 ( 38) ACCGGGAA 1 chr3:176914583-176914663 ( 59) ACCGGGAA 1 chr9:95857495-95857575 ( 34) TTTGGGAA 1 chr10:32635830-32635910 ( 40) TCTGGGGA 1 chr1:33282564-33282644 ( 37) TCTGGGGA 1 chr1:8877227-8877307 ( 41) TCCGGGGA 1 chr8:37888791-37888871 ( 72) TCCGGGGA 1 chr7:64459542-64459622 ( 36) TCATGGGA 1 chr18:3451796-3451876 ( 27) ACAGGGAA 1 chr5:133561443-133561523 ( 27) ACCTGGGA 1 chr7:99156629-99156709 ( 34) TTTTGGGA 1 chr2:70314939-70315019 ( 21) ATTGGGAA 1 chr9:132647784-132647864 ( 63) ATCGGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.4104 E= 5.4e+004 89 -1177 -1177 203 -1177 137 -1177 -23 2 64 -1177 91 -1177 -1177 71 145 -1177 -1177 159 -1177 -1177 -1177 159 -1177 189 -1177 16 -1177 256 -1177 -1177 -1177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 35 E= 5.4e+004 0.314286 0.000000 0.000000 0.685714 0.000000 0.857143 0.000000 0.142857 0.171429 0.514286 0.000000 0.314286 0.000000 0.000000 0.542857 0.457143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.628571 0.000000 0.371429 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYKGGRA MEME-2 regular expression -------------------------------------------------------------------------------- [TA]C[CT][GT]GG[AG]A -------------------------------------------------------------------------------- Time 9.03 secs. ******************************************************************************** ******************************************************************************** MOTIF AATTGTCT MEME-3 width = 8 sites = 2 llr = 26 E-value = 3.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A aa:::::: pos.-specific C ::::::a: probability G ::::a::: matrix T ::aa:a:a bits 2.6 **** * * 2.3 **** * * 2.1 **** * * 1.8 **** * * Relative 1.5 ******** Entropy 1.3 ******** (18.6 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AATTGTCT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:127414189-127414269 27 2.50e-06 GTGGGGCCAG AATTGTCT CCCTAAAGAA chr2:145273470-145273550 46 2.50e-06 GGGCGCGCAC AATTGTCT TCTCTAGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:127414189-127414269 2.5e-06 26_[+3]_46 chr2:145273470-145273550 2.5e-06 45_[+3]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AATTGTCT width=8 seqs=2 chr2:127414189-127414269 ( 27) AATTGTCT 1 chr2:145273470-145273550 ( 46) AATTGTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.3073 E= 3.4e+004 256 -765 -765 -765 256 -765 -765 -765 -765 -765 -765 257 -765 -765 -765 257 -765 -765 158 -765 -765 -765 -765 257 -765 159 -765 -765 -765 -765 -765 257 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 3.4e+004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATTGTCT MEME-3 regular expression -------------------------------------------------------------------------------- AATTGTCT -------------------------------------------------------------------------------- Time 12.77 secs. ******************************************************************************** ******************************************************************************** MOTIF ATTTATRT MEME-4 width = 8 sites = 2 llr = 26 E-value = 2.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 Description -------------------------------------------------------------------------------- Simplified A a:::a:5: pos.-specific C :::::::: probability G ::::::5: matrix T :aaa:a:a bits 2.6 ****** * 2.3 ****** * 2.1 ****** * 1.8 ****** * Relative 1.5 ****** * Entropy 1.3 ****** * (19.1 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATTTATAT consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:204681399-204681479 46 6.46e-07 ACGGCTGGTT ATTTATAT CCCTGAGCAG chr22:20073386-20073466 43 1.91e-06 AGCTGTGTAG ATTTATGT GAGGGCTTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:204681399-204681479 6.5e-07 45_[+4]_27 chr22:20073386-20073466 1.9e-06 42_[+4]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATTTATRT width=8 seqs=2 chr1:204681399-204681479 ( 46) ATTTATAT 1 chr22:20073386-20073466 ( 43) ATTTATGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 2.1e+004 256 -765 -765 -765 -765 -765 -765 257 -765 -765 -765 257 -765 -765 -765 257 256 -765 -765 -765 -765 -765 -765 257 156 -765 59 -765 -765 -765 -765 257 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.1e+004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTTATRT MEME-4 regular expression -------------------------------------------------------------------------------- ATTTAT[AG]T -------------------------------------------------------------------------------- Time 16.54 secs. ******************************************************************************** ******************************************************************************** MOTIF TTSTTTAA MEME-5 width = 8 sites = 2 llr = 26 E-value = 2.6e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::::aa pos.-specific C ::5::::: probability G ::5::::: matrix T aa:aaa:: bits 2.6 ** ***** 2.3 ** ***** 2.1 ** ***** 1.8 ** ***** Relative 1.5 ** ***** Entropy 1.3 ** ***** (18.6 bits) 1.0 ** ***** 0.8 ** ***** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTCTTTAA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:85765564-85765644 40 2.53e-06 AGGAGGGCGA TTGTTTAA ATCGATGGCA chr9:80911368-80911448 41 2.53e-06 GCCACCTCCG TTCTTTAA TCCTGCAGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:85765564-85765644 2.5e-06 39_[+5]_33 chr9:80911368-80911448 2.5e-06 40_[+5]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTSTTTAA width=8 seqs=2 chr2:85765564-85765644 ( 40) TTGTTTAA 1 chr9:80911368-80911448 ( 41) TTCTTTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 2.6e+004 -765 -765 -765 257 -765 -765 -765 257 -765 59 59 -765 -765 -765 -765 257 -765 -765 -765 257 -765 -765 -765 257 256 -765 -765 -765 256 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.6e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSTTTAA MEME-5 regular expression -------------------------------------------------------------------------------- TT[CG]TTTAA -------------------------------------------------------------------------------- Time 20.30 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:133017115-133017195 5.78e-01 80 chr11:65628605-65628685 2.90e-02 80 chr17:36571302-36571382 6.37e-01 80 chr22:22120509-22120589 6.67e-01 80 chr19:2041734-2041814 6.89e-01 80 chr6:37138690-37138770 7.74e-01 80 chr19:5623481-5623561 9.99e-01 80 chr17:41278156-41278236 8.22e-02 80 chr11:34074645-34074725 7.41e-02 80 chr11:77761325-77761405 3.14e-02 80 chr5:131795599-131795679 8.50e-01 80 chr5:137878380-137878460 3.66e-01 80 chr22:41697920-41698000 8.85e-06 11_[+2(6.34e-05)]_21_[+3(8.67e-05)]_\ 9_[+1(1.47e-05)]_15 chr5:176923559-176923639 9.97e-01 80 chr17:46620682-46620762 9.96e-01 80 chr1:47696521-47696601 9.99e-01 80 chr1:228270813-228270893 7.26e-01 80 chr12:122242681-12224276 7.51e-01 80 chr22:23535117-23535197 5.89e-01 80 chr10:111970179-11197025 8.29e-01 80 chr22:18978559-18978639 7.57e-01 80 chr2:172967040-172967120 6.27e-01 80 chr17:46703285-46703365 9.60e-01 80 chr20:48809450-48809530 6.80e-01 80 chr2:145273470-145273550 5.23e-04 45_[+3(2.50e-06)]_27 chr11:57261515-57261595 8.58e-01 80 chr15:75339942-75340022 2.22e-01 80 chr19:10613066-10613146 9.92e-01 80 chr21:47743330-47743410 9.78e-01 80 chr15:41245140-41245220 7.05e-01 80 chr17:79480392-79480472 9.66e-01 80 chr1:9777066-9777146 7.31e-01 80 chr1:145396046-145396126 9.32e-01 80 chr4:775107-775187 7.16e-01 80 chr9:80911368-80911448 9.92e-03 40_[+5(2.53e-06)]_32 chr7:150650936-150651016 9.00e-01 80 chr6:125284316-125284396 5.26e-01 80 chr4:24585724-24585804 8.85e-01 80 chr22:20791553-20791633 1.80e-02 39_[+1(2.45e-05)]_33 chr7:100033265-100033345 4.18e-01 80 chr5:176831810-176831890 9.57e-01 80 chr6:43740088-43740168 6.44e-01 80 chr16:87985563-87985643 4.47e-01 80 chr19:1408208-1408288 5.65e-01 80 chr9:139981788-139981868 7.71e-01 80 chr19:571375-571455 4.06e-02 80 chr12:57081430-57081510 9.12e-01 80 chr1:29063907-29063987 2.56e-03 7_[+1(2.45e-05)]_5_[+5(9.15e-05)]_\ 52 chr22:21140522-21140602 1.49e-01 80 chr17:46619764-46619844 2.05e-01 80 chr1:33282564-33282644 4.25e-03 80 chr21:44395729-44395809 1.07e-01 55_[+2(4.86e-05)]_17 chr6:34760249-34760329 4.87e-01 80 chr22:23003278-23003358 1.42e-01 80 chr7:64459542-64459622 2.09e-01 80 chr8:38240269-38240349 7.47e-02 25_[+2(7.57e-05)]_47 chr22:19864176-19864256 7.86e-01 80 chr22:22126794-22126874 3.20e-01 80 chr20:30102659-30102739 1.04e-02 37_[+1(9.85e-06)]_35 chr20:362012-362092 8.74e-01 80 chr11:34937487-34937567 1.64e-04 30_[+1(4.96e-06)]_42 chr19:41770707-41770787 9.51e-01 80 chr17:48944198-48944278 4.67e-01 80 chr22:23356270-23356350 3.57e-01 80 chr12:102091888-10209196 9.99e-01 80 chr9:86594831-86594911 3.39e-01 80 chr10:12084530-12084610 9.16e-01 80 chr16:81492051-81492131 9.29e-01 80 chr1:28562974-28563054 9.39e-02 80 chr6:135503621-135503701 9.57e-01 80 chr21:45138465-45138545 5.07e-01 80 chr1:1509633-1509713 2.81e-01 80 chr16:89041996-89042076 7.77e-01 80 chr7:30634906-30634986 2.36e-01 80 chr22:20129300-20129380 9.31e-01 80 chr8:37888791-37888871 2.30e-01 80 chr3:176914583-176914663 8.05e-02 80 chr9:100745917-100745997 7.15e-01 80 chr11:64889125-64889205 5.48e-01 80 chr12:90101831-90101911 9.86e-01 80 chr19:18271782-18271862 9.61e-01 80 chr1:65533639-65533719 9.53e-01 80 chr17:47075006-47075086 9.96e-01 80 chr20:30193832-30193912 8.89e-02 80 chr1:236558950-236559030 8.30e-01 80 chr1:204681399-204681479 3.29e-05 45_[+4(6.46e-07)]_27 chr2:127414189-127414269 1.64e-03 26_[+3(2.50e-06)]_46 chr9:101984767-101984847 1.68e-01 80 chr5:133561443-133561523 2.54e-01 80 chr22:21343234-21343314 7.10e-02 64_[+2(9.04e-05)]_8 chr4:80993738-80993818 9.43e-01 80 chr2:241505652-241505732 2.43e-02 5_[+2(1.47e-05)]_67 chr5:133984723-133984803 3.92e-01 80 chr8:91997108-91997188 3.54e-02 80 chr2:70528775-70528855 9.90e-01 80 chr12:123848949-12384902 1.00e+00 80 chr22:19929679-19929759 9.05e-01 80 chr18:33767913-33767993 8.38e-01 80 chr3:128135637-128135717 9.58e-01 80 chr7:644657-644737 2.17e-02 80 chr6:160390547-160390627 6.17e-01 80 chr3:156877481-156877561 9.41e-01 80 chr11:47416012-47416092 7.12e-01 80 chr1:27114116-27114196 3.66e-01 80 chr9:132647784-132647864 3.09e-01 80 chr3:128369263-128369343 1.31e-02 17_[+1(9.85e-06)]_55 chr5:172754321-172754401 9.88e-01 80 chr17:79894767-79894847 4.82e-01 80 chr16:87812470-87812550 2.86e-02 80 chr11:118927545-11892762 9.90e-01 80 chr11:61583159-61583239 9.33e-01 80 chr16:67970284-67970364 1.88e-01 14_[+2(5.36e-05)]_58 chr1:201140247-201140327 6.81e-01 80 chr2:10418310-10418390 9.88e-01 80 chr1:1510660-1510740 6.69e-01 80 chr1:20987491-20987571 9.47e-01 80 chr3:171757635-171757715 7.03e-01 80 chr12:53267709-53267789 9.73e-03 51_[+2(4.86e-05)]_21 chr20:34541831-34541911 6.24e-01 80 chr16:30596666-30596746 9.88e-01 80 chr10:112632293-11263237 9.78e-01 80 chr10:74033068-74033148 3.94e-01 80 chr9:95857495-95857575 1.30e-01 80 chr6:34205631-34205711 9.70e-01 80 chr2:38870479-38870559 3.21e-01 43_[+2(6.34e-05)]_29 chr7:643806-643886 6.41e-04 67_[+1(2.48e-06)]_5 chr21:44527197-44527277 6.42e-01 80 chr7:99156629-99156709 7.45e-03 80 chr3:151987106-151987186 9.74e-01 80 chr7:152372842-152372922 1.43e-01 80 chr1:32671517-32671597 1.66e-01 22_[+2(7.57e-05)]_50 chr11:3861809-3861889 8.81e-03 80 chr17:56084256-56084336 1.79e-04 12_[+1(2.48e-06)]_60 chr2:27009244-27009324 4.22e-01 80 chrX:153991523-153991603 2.42e-01 80 chr2:70314939-70315019 2.47e-01 80 chr7:155436683-155436763 9.92e-01 80 chr14:23322524-23322604 1.74e-01 80 chr22:19130036-19130116 8.56e-01 80 chr11:61717791-61717871 9.54e-01 80 chr22:19930495-19930575 1.73e-01 80 chr19:50427422-50427502 1.04e-01 80 chr12:116990518-11699059 5.53e-01 80 chr15:93426585-93426665 9.78e-01 80 chr16:87840847-87840927 6.82e-03 15_[+2(1.47e-05)]_57 chr22:37958154-37958234 3.48e-02 4_[+3(8.67e-05)]_68 chr6:27861549-27861629 9.41e-01 80 chr6:32938234-32938314 8.30e-01 80 chr8:56685465-56685545 9.57e-01 80 chr9:128004290-128004370 9.84e-01 80 chr3:128208827-128208907 1.15e-01 48_[+2(7.57e-05)]_24 chr3:150127093-150127173 6.66e-01 80 chr6:33589483-33589563 1.00e+00 80 chr17:25680477-25680557 4.62e-02 50_[+2(7.57e-05)]_22 chr4:83294770-83294850 7.04e-01 80 chr22:19172159-19172239 3.56e-02 22_[+3(8.67e-05)]_50 chr19:12902844-12902924 2.38e-01 80 chr1:245027084-245027164 9.89e-01 80 chr1:11865476-11865556 9.50e-01 80 chr7:97501313-97501393 1.71e-01 80 chr7:44924657-44924737 3.46e-01 80 chr19:49258340-49258420 9.97e-01 80 chr13:111522203-11152228 7.58e-01 80 chr22:20048642-20048722 1.31e-01 80 chr7:148396652-148396732 6.87e-01 80 chr11:9335822-9335902 7.51e-01 80 chr8:29940226-29940306 3.32e-01 38_[+2(4.86e-05)]_34 chr1:228271012-228271092 9.03e-02 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chr16:30621362-30621442 9.04e-01 80 chr19:11200492-11200572 2.20e-02 58_[+5(9.15e-05)]_14 chr19:16652894-16652974 9.66e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************